Multiple sequence alignment - TraesCS3A01G119800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G119800 chr3A 100.000 3314 0 0 1 3314 93336359 93339672 0.000000e+00 6120.0
1 TraesCS3A01G119800 chr3A 93.320 1991 114 5 345 2319 93263091 93265078 0.000000e+00 2922.0
2 TraesCS3A01G119800 chr3A 91.108 1327 112 4 1001 2324 93042873 93041550 0.000000e+00 1792.0
3 TraesCS3A01G119800 chr3A 92.606 284 21 0 2055 2338 93265666 93265949 3.080000e-110 409.0
4 TraesCS3A01G119800 chr3A 95.238 168 5 3 2407 2573 93309894 93310059 2.540000e-66 263.0
5 TraesCS3A01G119800 chr3A 92.941 85 6 0 3 87 93264994 93265078 1.250000e-24 124.0
6 TraesCS3A01G119800 chr3B 87.161 2547 240 65 350 2861 125551143 125553637 0.000000e+00 2811.0
7 TraesCS3A01G119800 chr3B 89.655 1682 117 28 684 2339 125778663 125780313 0.000000e+00 2089.0
8 TraesCS3A01G119800 chr3B 91.258 1327 110 5 1001 2324 125524355 125523032 0.000000e+00 1803.0
9 TraesCS3A01G119800 chr3B 73.632 201 40 8 108 296 564627098 564626899 7.680000e-07 65.8
10 TraesCS3A01G119800 chr3D 88.555 2062 146 40 345 2339 79427379 79429417 0.000000e+00 2418.0
11 TraesCS3A01G119800 chr3D 89.731 1675 102 23 684 2321 79503945 79505586 0.000000e+00 2076.0
12 TraesCS3A01G119800 chr3D 91.108 1327 112 4 1001 2324 79421371 79420048 0.000000e+00 1792.0
13 TraesCS3A01G119800 chr3D 84.724 707 96 11 2411 3110 79429477 79430178 0.000000e+00 697.0
14 TraesCS3A01G119800 chr1D 81.132 848 139 17 1445 2289 117400295 117399466 0.000000e+00 660.0
15 TraesCS3A01G119800 chr1A 74.260 439 81 23 1025 1449 129004987 129004567 4.430000e-34 156.0
16 TraesCS3A01G119800 chr2D 100.000 29 0 0 110 138 43511597 43511569 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G119800 chr3A 93336359 93339672 3313 False 6120.000000 6120 100.000000 1 3314 1 chr3A.!!$F2 3313
1 TraesCS3A01G119800 chr3A 93041550 93042873 1323 True 1792.000000 1792 91.108000 1001 2324 1 chr3A.!!$R1 1323
2 TraesCS3A01G119800 chr3A 93263091 93265949 2858 False 1151.666667 2922 92.955667 3 2338 3 chr3A.!!$F3 2335
3 TraesCS3A01G119800 chr3B 125551143 125553637 2494 False 2811.000000 2811 87.161000 350 2861 1 chr3B.!!$F1 2511
4 TraesCS3A01G119800 chr3B 125778663 125780313 1650 False 2089.000000 2089 89.655000 684 2339 1 chr3B.!!$F2 1655
5 TraesCS3A01G119800 chr3B 125523032 125524355 1323 True 1803.000000 1803 91.258000 1001 2324 1 chr3B.!!$R1 1323
6 TraesCS3A01G119800 chr3D 79503945 79505586 1641 False 2076.000000 2076 89.731000 684 2321 1 chr3D.!!$F1 1637
7 TraesCS3A01G119800 chr3D 79420048 79421371 1323 True 1792.000000 1792 91.108000 1001 2324 1 chr3D.!!$R1 1323
8 TraesCS3A01G119800 chr3D 79427379 79430178 2799 False 1557.500000 2418 86.639500 345 3110 2 chr3D.!!$F2 2765
9 TraesCS3A01G119800 chr1D 117399466 117400295 829 True 660.000000 660 81.132000 1445 2289 1 chr1D.!!$R1 844

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.035317 GCTCATCACCCAGTGTGTGA 59.965 55.0 10.98 10.98 45.98 3.58 F
133 134 0.035439 CGGGTGCTATCTTTGGTGGT 60.035 55.0 0.00 0.00 0.00 4.16 F
377 378 0.108615 TTTTGCCACCAACAACACCG 60.109 50.0 0.00 0.00 0.00 4.94 F
1710 1822 0.681887 TCTCGGCGGACTACATTGGA 60.682 55.0 7.21 0.00 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1695 1807 0.249398 AGTGTCCAATGTAGTCCGCC 59.751 55.000 0.00 0.0 0.00 6.13 R
2070 2182 1.830279 AGTCCGACGTGATCTGGTAA 58.170 50.000 0.00 0.0 0.00 2.85 R
2241 2353 2.665000 CACTGGGTGATGAGCCGT 59.335 61.111 0.00 0.0 43.35 5.68 R
2899 3286 0.034896 AGGATCGACCACGTTTGCTT 59.965 50.000 6.78 0.0 42.04 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.148825 GACAGGGACGCGGCTCAT 62.149 66.667 17.76 0.00 0.00 2.90
18 19 4.148825 ACAGGGACGCGGCTCATC 62.149 66.667 17.76 0.00 0.00 2.92
19 20 4.147449 CAGGGACGCGGCTCATCA 62.147 66.667 17.76 0.00 0.00 3.07
20 21 4.148825 AGGGACGCGGCTCATCAC 62.149 66.667 17.76 0.00 0.00 3.06
23 24 4.451150 GACGCGGCTCATCACCCA 62.451 66.667 12.47 0.00 0.00 4.51
24 25 4.457496 ACGCGGCTCATCACCCAG 62.457 66.667 12.47 0.00 0.00 4.45
25 26 4.457496 CGCGGCTCATCACCCAGT 62.457 66.667 0.00 0.00 0.00 4.00
26 27 2.821366 GCGGCTCATCACCCAGTG 60.821 66.667 0.00 0.00 34.45 3.66
27 28 2.665000 CGGCTCATCACCCAGTGT 59.335 61.111 0.00 0.00 34.79 3.55
28 29 1.742880 CGGCTCATCACCCAGTGTG 60.743 63.158 0.00 0.00 46.88 3.82
29 30 1.376466 GGCTCATCACCCAGTGTGT 59.624 57.895 0.00 0.00 45.61 3.72
30 31 0.957395 GGCTCATCACCCAGTGTGTG 60.957 60.000 0.00 0.00 45.61 3.82
31 32 0.035317 GCTCATCACCCAGTGTGTGA 59.965 55.000 10.98 10.98 45.98 3.58
34 35 4.798433 TCACCCAGTGTGTGATGC 57.202 55.556 4.13 0.00 45.61 3.91
35 36 1.073025 TCACCCAGTGTGTGATGCC 59.927 57.895 4.13 0.00 45.61 4.40
36 37 1.073722 CACCCAGTGTGTGATGCCT 59.926 57.895 0.00 0.00 40.26 4.75
37 38 1.073722 ACCCAGTGTGTGATGCCTG 59.926 57.895 0.00 0.00 0.00 4.85
38 39 1.376086 CCCAGTGTGTGATGCCTGA 59.624 57.895 0.00 0.00 0.00 3.86
39 40 0.957395 CCCAGTGTGTGATGCCTGAC 60.957 60.000 0.00 0.00 0.00 3.51
40 41 0.957395 CCAGTGTGTGATGCCTGACC 60.957 60.000 0.00 0.00 0.00 4.02
41 42 1.004560 AGTGTGTGATGCCTGACCG 60.005 57.895 0.00 0.00 0.00 4.79
42 43 2.358615 TGTGTGATGCCTGACCGC 60.359 61.111 0.00 0.00 0.00 5.68
43 44 3.490759 GTGTGATGCCTGACCGCG 61.491 66.667 0.00 0.00 0.00 6.46
44 45 4.002506 TGTGATGCCTGACCGCGT 62.003 61.111 4.92 0.00 0.00 6.01
45 46 3.188786 GTGATGCCTGACCGCGTC 61.189 66.667 4.92 3.35 43.73 5.19
46 47 4.794439 TGATGCCTGACCGCGTCG 62.794 66.667 4.92 0.00 45.93 5.12
70 71 2.989639 TCCACCAGGGAATGCTCG 59.010 61.111 0.00 0.00 44.80 5.03
71 72 1.612146 TCCACCAGGGAATGCTCGA 60.612 57.895 0.00 0.00 44.80 4.04
72 73 1.450312 CCACCAGGGAATGCTCGAC 60.450 63.158 0.00 0.00 40.01 4.20
73 74 1.296392 CACCAGGGAATGCTCGACA 59.704 57.895 0.00 0.00 0.00 4.35
74 75 0.107508 CACCAGGGAATGCTCGACAT 60.108 55.000 0.00 0.00 42.30 3.06
75 76 0.107508 ACCAGGGAATGCTCGACATG 60.108 55.000 0.00 0.00 39.60 3.21
76 77 0.178767 CCAGGGAATGCTCGACATGA 59.821 55.000 0.00 0.00 39.60 3.07
77 78 1.407299 CCAGGGAATGCTCGACATGAA 60.407 52.381 0.00 0.00 39.60 2.57
78 79 1.667724 CAGGGAATGCTCGACATGAAC 59.332 52.381 0.00 0.00 39.60 3.18
79 80 1.556911 AGGGAATGCTCGACATGAACT 59.443 47.619 0.00 0.00 39.60 3.01
80 81 1.667724 GGGAATGCTCGACATGAACTG 59.332 52.381 0.00 0.00 39.60 3.16
81 82 1.667724 GGAATGCTCGACATGAACTGG 59.332 52.381 0.00 0.00 39.60 4.00
82 83 1.063174 GAATGCTCGACATGAACTGGC 59.937 52.381 0.00 0.00 39.60 4.85
83 84 0.745845 ATGCTCGACATGAACTGGCC 60.746 55.000 0.00 0.00 37.70 5.36
84 85 2.456119 GCTCGACATGAACTGGCCG 61.456 63.158 0.00 0.00 0.00 6.13
85 86 1.811266 CTCGACATGAACTGGCCGG 60.811 63.158 11.02 11.02 0.00 6.13
86 87 2.225791 CTCGACATGAACTGGCCGGA 62.226 60.000 21.41 0.00 0.00 5.14
87 88 1.811266 CGACATGAACTGGCCGGAG 60.811 63.158 21.41 2.85 0.00 4.63
88 89 2.045926 ACATGAACTGGCCGGAGC 60.046 61.111 21.41 10.13 38.76 4.70
89 90 2.270205 CATGAACTGGCCGGAGCT 59.730 61.111 21.41 1.23 39.73 4.09
90 91 2.110967 CATGAACTGGCCGGAGCTG 61.111 63.158 21.41 6.19 39.73 4.24
91 92 2.293318 ATGAACTGGCCGGAGCTGA 61.293 57.895 21.41 0.00 39.73 4.26
92 93 2.435059 GAACTGGCCGGAGCTGAC 60.435 66.667 21.41 0.00 39.73 3.51
93 94 2.925170 AACTGGCCGGAGCTGACT 60.925 61.111 21.41 0.00 39.73 3.41
94 95 3.245668 AACTGGCCGGAGCTGACTG 62.246 63.158 21.41 0.00 39.73 3.51
95 96 4.463879 CTGGCCGGAGCTGACTGG 62.464 72.222 5.28 0.00 39.73 4.00
102 103 4.742201 GAGCTGACTGGCGCGGAA 62.742 66.667 8.83 0.00 37.29 4.30
103 104 4.749310 AGCTGACTGGCGCGGAAG 62.749 66.667 8.83 0.93 37.29 3.46
104 105 4.742201 GCTGACTGGCGCGGAAGA 62.742 66.667 8.83 0.00 0.00 2.87
105 106 2.048222 CTGACTGGCGCGGAAGAA 60.048 61.111 8.83 0.00 0.00 2.52
106 107 2.048222 TGACTGGCGCGGAAGAAG 60.048 61.111 8.83 0.00 0.00 2.85
107 108 2.048127 GACTGGCGCGGAAGAAGT 60.048 61.111 8.83 0.00 0.00 3.01
108 109 2.357517 ACTGGCGCGGAAGAAGTG 60.358 61.111 8.83 0.00 0.00 3.16
109 110 2.357517 CTGGCGCGGAAGAAGTGT 60.358 61.111 8.83 0.00 0.00 3.55
110 111 1.080093 CTGGCGCGGAAGAAGTGTA 60.080 57.895 8.83 0.00 0.00 2.90
111 112 1.078759 CTGGCGCGGAAGAAGTGTAG 61.079 60.000 8.83 0.00 0.00 2.74
112 113 1.080025 GGCGCGGAAGAAGTGTAGT 60.080 57.895 8.83 0.00 0.00 2.73
113 114 1.077089 GGCGCGGAAGAAGTGTAGTC 61.077 60.000 8.83 0.00 0.00 2.59
114 115 1.077089 GCGCGGAAGAAGTGTAGTCC 61.077 60.000 8.83 0.00 0.00 3.85
118 119 1.264295 GGAAGAAGTGTAGTCCGGGT 58.736 55.000 0.00 0.00 0.00 5.28
119 120 1.067071 GGAAGAAGTGTAGTCCGGGTG 60.067 57.143 0.00 0.00 0.00 4.61
120 121 0.320697 AAGAAGTGTAGTCCGGGTGC 59.679 55.000 0.00 0.00 0.00 5.01
121 122 0.542232 AGAAGTGTAGTCCGGGTGCT 60.542 55.000 0.00 0.00 0.00 4.40
122 123 1.180029 GAAGTGTAGTCCGGGTGCTA 58.820 55.000 0.00 0.00 0.00 3.49
123 124 1.755380 GAAGTGTAGTCCGGGTGCTAT 59.245 52.381 0.00 0.00 0.00 2.97
124 125 1.400737 AGTGTAGTCCGGGTGCTATC 58.599 55.000 0.00 1.06 0.00 2.08
125 126 1.063867 AGTGTAGTCCGGGTGCTATCT 60.064 52.381 0.00 3.18 0.00 1.98
126 127 1.755380 GTGTAGTCCGGGTGCTATCTT 59.245 52.381 0.00 0.00 0.00 2.40
127 128 2.167900 GTGTAGTCCGGGTGCTATCTTT 59.832 50.000 0.00 0.00 0.00 2.52
128 129 2.167693 TGTAGTCCGGGTGCTATCTTTG 59.832 50.000 0.00 0.00 0.00 2.77
129 130 0.541863 AGTCCGGGTGCTATCTTTGG 59.458 55.000 0.00 0.00 0.00 3.28
130 131 0.252197 GTCCGGGTGCTATCTTTGGT 59.748 55.000 0.00 0.00 0.00 3.67
131 132 0.251916 TCCGGGTGCTATCTTTGGTG 59.748 55.000 0.00 0.00 0.00 4.17
132 133 0.748005 CCGGGTGCTATCTTTGGTGG 60.748 60.000 0.00 0.00 0.00 4.61
133 134 0.035439 CGGGTGCTATCTTTGGTGGT 60.035 55.000 0.00 0.00 0.00 4.16
134 135 1.463674 GGGTGCTATCTTTGGTGGTG 58.536 55.000 0.00 0.00 0.00 4.17
135 136 1.463674 GGTGCTATCTTTGGTGGTGG 58.536 55.000 0.00 0.00 0.00 4.61
136 137 1.271926 GGTGCTATCTTTGGTGGTGGT 60.272 52.381 0.00 0.00 0.00 4.16
137 138 2.514803 GTGCTATCTTTGGTGGTGGTT 58.485 47.619 0.00 0.00 0.00 3.67
138 139 2.890945 GTGCTATCTTTGGTGGTGGTTT 59.109 45.455 0.00 0.00 0.00 3.27
139 140 2.890311 TGCTATCTTTGGTGGTGGTTTG 59.110 45.455 0.00 0.00 0.00 2.93
140 141 2.352715 GCTATCTTTGGTGGTGGTTTGC 60.353 50.000 0.00 0.00 0.00 3.68
141 142 2.086610 ATCTTTGGTGGTGGTTTGCT 57.913 45.000 0.00 0.00 0.00 3.91
142 143 1.110442 TCTTTGGTGGTGGTTTGCTG 58.890 50.000 0.00 0.00 0.00 4.41
143 144 0.823460 CTTTGGTGGTGGTTTGCTGT 59.177 50.000 0.00 0.00 0.00 4.40
144 145 1.206849 CTTTGGTGGTGGTTTGCTGTT 59.793 47.619 0.00 0.00 0.00 3.16
145 146 0.534412 TTGGTGGTGGTTTGCTGTTG 59.466 50.000 0.00 0.00 0.00 3.33
146 147 0.613292 TGGTGGTGGTTTGCTGTTGT 60.613 50.000 0.00 0.00 0.00 3.32
147 148 0.534873 GGTGGTGGTTTGCTGTTGTT 59.465 50.000 0.00 0.00 0.00 2.83
148 149 1.639280 GTGGTGGTTTGCTGTTGTTG 58.361 50.000 0.00 0.00 0.00 3.33
149 150 1.067213 GTGGTGGTTTGCTGTTGTTGT 60.067 47.619 0.00 0.00 0.00 3.32
150 151 1.067283 TGGTGGTTTGCTGTTGTTGTG 60.067 47.619 0.00 0.00 0.00 3.33
151 152 1.203523 GGTGGTTTGCTGTTGTTGTGA 59.796 47.619 0.00 0.00 0.00 3.58
152 153 2.529151 GTGGTTTGCTGTTGTTGTGAG 58.471 47.619 0.00 0.00 0.00 3.51
153 154 2.094752 GTGGTTTGCTGTTGTTGTGAGT 60.095 45.455 0.00 0.00 0.00 3.41
154 155 2.094803 TGGTTTGCTGTTGTTGTGAGTG 60.095 45.455 0.00 0.00 0.00 3.51
155 156 2.094752 GGTTTGCTGTTGTTGTGAGTGT 60.095 45.455 0.00 0.00 0.00 3.55
156 157 3.574614 GTTTGCTGTTGTTGTGAGTGTT 58.425 40.909 0.00 0.00 0.00 3.32
157 158 4.380023 GGTTTGCTGTTGTTGTGAGTGTTA 60.380 41.667 0.00 0.00 0.00 2.41
158 159 5.157781 GTTTGCTGTTGTTGTGAGTGTTAA 58.842 37.500 0.00 0.00 0.00 2.01
159 160 4.349663 TGCTGTTGTTGTGAGTGTTAAC 57.650 40.909 0.00 0.00 0.00 2.01
160 161 3.127895 TGCTGTTGTTGTGAGTGTTAACC 59.872 43.478 2.48 0.00 0.00 2.85
161 162 3.127895 GCTGTTGTTGTGAGTGTTAACCA 59.872 43.478 2.48 0.00 0.00 3.67
162 163 4.658071 CTGTTGTTGTGAGTGTTAACCAC 58.342 43.478 2.48 4.92 44.89 4.16
182 183 6.894339 CCACTGTGGTAGGACTTTTTATTT 57.106 37.500 18.76 0.00 31.35 1.40
183 184 7.989416 CCACTGTGGTAGGACTTTTTATTTA 57.011 36.000 18.76 0.00 31.35 1.40
184 185 8.575649 CCACTGTGGTAGGACTTTTTATTTAT 57.424 34.615 18.76 0.00 31.35 1.40
185 186 9.020731 CCACTGTGGTAGGACTTTTTATTTATT 57.979 33.333 18.76 0.00 31.35 1.40
230 231 4.846779 TTTTAGAAGGTTGTGTGCATCC 57.153 40.909 0.00 0.00 35.27 3.51
231 232 3.788227 TTAGAAGGTTGTGTGCATCCT 57.212 42.857 0.00 0.00 44.40 3.24
232 233 2.191128 AGAAGGTTGTGTGCATCCTC 57.809 50.000 0.00 0.00 42.36 3.71
233 234 1.421268 AGAAGGTTGTGTGCATCCTCA 59.579 47.619 0.00 0.00 42.36 3.86
234 235 2.158623 AGAAGGTTGTGTGCATCCTCAA 60.159 45.455 0.00 0.00 42.36 3.02
235 236 2.592102 AGGTTGTGTGCATCCTCAAT 57.408 45.000 0.00 0.00 39.89 2.57
236 237 2.165167 AGGTTGTGTGCATCCTCAATG 58.835 47.619 0.00 0.00 39.89 2.82
237 238 1.888512 GGTTGTGTGCATCCTCAATGT 59.111 47.619 0.00 0.00 37.71 2.71
238 239 2.095059 GGTTGTGTGCATCCTCAATGTC 60.095 50.000 0.00 0.00 37.71 3.06
239 240 2.816087 GTTGTGTGCATCCTCAATGTCT 59.184 45.455 0.00 0.00 37.71 3.41
240 241 2.703416 TGTGTGCATCCTCAATGTCTC 58.297 47.619 0.00 0.00 37.71 3.36
241 242 2.038820 TGTGTGCATCCTCAATGTCTCA 59.961 45.455 0.00 0.00 37.71 3.27
242 243 3.276857 GTGTGCATCCTCAATGTCTCAT 58.723 45.455 0.00 0.00 37.71 2.90
243 244 3.693085 GTGTGCATCCTCAATGTCTCATT 59.307 43.478 0.00 0.00 37.71 2.57
244 245 4.157289 GTGTGCATCCTCAATGTCTCATTT 59.843 41.667 0.00 0.00 37.71 2.32
245 246 4.768448 TGTGCATCCTCAATGTCTCATTTT 59.232 37.500 0.00 0.00 37.71 1.82
246 247 5.100259 GTGCATCCTCAATGTCTCATTTTG 58.900 41.667 0.00 0.00 37.71 2.44
247 248 4.768448 TGCATCCTCAATGTCTCATTTTGT 59.232 37.500 0.00 0.00 37.71 2.83
248 249 5.244402 TGCATCCTCAATGTCTCATTTTGTT 59.756 36.000 0.00 0.00 37.71 2.83
249 250 5.575606 GCATCCTCAATGTCTCATTTTGTTG 59.424 40.000 0.00 0.00 37.71 3.33
250 251 5.710513 TCCTCAATGTCTCATTTTGTTGG 57.289 39.130 0.00 0.00 0.00 3.77
251 252 5.139727 TCCTCAATGTCTCATTTTGTTGGT 58.860 37.500 0.00 0.00 0.00 3.67
252 253 5.009911 TCCTCAATGTCTCATTTTGTTGGTG 59.990 40.000 0.00 0.00 0.00 4.17
253 254 4.619973 TCAATGTCTCATTTTGTTGGTGC 58.380 39.130 0.00 0.00 0.00 5.01
254 255 2.772568 TGTCTCATTTTGTTGGTGCG 57.227 45.000 0.00 0.00 0.00 5.34
255 256 1.336440 TGTCTCATTTTGTTGGTGCGG 59.664 47.619 0.00 0.00 0.00 5.69
256 257 1.606668 GTCTCATTTTGTTGGTGCGGA 59.393 47.619 0.00 0.00 0.00 5.54
257 258 2.034053 GTCTCATTTTGTTGGTGCGGAA 59.966 45.455 0.00 0.00 0.00 4.30
258 259 2.293122 TCTCATTTTGTTGGTGCGGAAG 59.707 45.455 0.00 0.00 0.00 3.46
270 271 4.629779 CGGAAGCCGGGTGTTATT 57.370 55.556 7.07 0.00 44.15 1.40
271 272 3.764658 CGGAAGCCGGGTGTTATTA 57.235 52.632 7.07 0.00 44.15 0.98
272 273 1.578583 CGGAAGCCGGGTGTTATTAG 58.421 55.000 7.07 0.00 44.15 1.73
273 274 1.134610 CGGAAGCCGGGTGTTATTAGT 60.135 52.381 7.07 0.00 44.15 2.24
274 275 2.101249 CGGAAGCCGGGTGTTATTAGTA 59.899 50.000 7.07 0.00 44.15 1.82
275 276 3.243975 CGGAAGCCGGGTGTTATTAGTAT 60.244 47.826 7.07 0.00 44.15 2.12
276 277 4.313282 GGAAGCCGGGTGTTATTAGTATC 58.687 47.826 7.07 0.00 0.00 2.24
277 278 4.040095 GGAAGCCGGGTGTTATTAGTATCT 59.960 45.833 7.07 0.00 0.00 1.98
278 279 5.454329 GGAAGCCGGGTGTTATTAGTATCTT 60.454 44.000 7.07 0.00 0.00 2.40
279 280 5.625568 AGCCGGGTGTTATTAGTATCTTT 57.374 39.130 4.72 0.00 0.00 2.52
280 281 5.365619 AGCCGGGTGTTATTAGTATCTTTG 58.634 41.667 4.72 0.00 0.00 2.77
281 282 4.024302 GCCGGGTGTTATTAGTATCTTTGC 60.024 45.833 2.18 0.00 0.00 3.68
282 283 4.210537 CCGGGTGTTATTAGTATCTTTGCG 59.789 45.833 0.00 0.00 0.00 4.85
283 284 5.045215 CGGGTGTTATTAGTATCTTTGCGA 58.955 41.667 0.00 0.00 0.00 5.10
284 285 5.694910 CGGGTGTTATTAGTATCTTTGCGAT 59.305 40.000 0.00 0.00 36.11 4.58
285 286 6.864685 CGGGTGTTATTAGTATCTTTGCGATA 59.135 38.462 0.00 0.00 33.48 2.92
286 287 7.061905 CGGGTGTTATTAGTATCTTTGCGATAG 59.938 40.741 0.00 0.00 35.34 2.08
287 288 7.871463 GGGTGTTATTAGTATCTTTGCGATAGT 59.129 37.037 0.00 0.00 40.51 2.12
288 289 9.903682 GGTGTTATTAGTATCTTTGCGATAGTA 57.096 33.333 0.00 0.00 38.77 1.82
319 320 9.927668 ATTATTTTGGTTGAAAAATGAGTCGAT 57.072 25.926 5.40 0.00 39.48 3.59
320 321 9.757227 TTATTTTGGTTGAAAAATGAGTCGATT 57.243 25.926 5.40 0.00 39.48 3.34
322 323 9.757227 ATTTTGGTTGAAAAATGAGTCGATTAA 57.243 25.926 0.00 0.00 38.12 1.40
323 324 9.757227 TTTTGGTTGAAAAATGAGTCGATTAAT 57.243 25.926 0.00 0.00 30.25 1.40
324 325 9.757227 TTTGGTTGAAAAATGAGTCGATTAATT 57.243 25.926 0.00 0.00 0.00 1.40
333 334 7.964545 AATGAGTCGATTAATTAAAAACGCC 57.035 32.000 1.21 0.00 0.00 5.68
334 335 5.871539 TGAGTCGATTAATTAAAAACGCCC 58.128 37.500 1.21 3.99 0.00 6.13
335 336 5.644636 TGAGTCGATTAATTAAAAACGCCCT 59.355 36.000 1.21 7.82 0.00 5.19
336 337 6.149807 TGAGTCGATTAATTAAAAACGCCCTT 59.850 34.615 1.21 0.00 0.00 3.95
337 338 6.916440 AGTCGATTAATTAAAAACGCCCTTT 58.084 32.000 1.21 0.00 0.00 3.11
338 339 8.042944 AGTCGATTAATTAAAAACGCCCTTTA 57.957 30.769 1.21 0.00 0.00 1.85
339 340 8.680001 AGTCGATTAATTAAAAACGCCCTTTAT 58.320 29.630 1.21 0.00 0.00 1.40
340 341 9.292846 GTCGATTAATTAAAAACGCCCTTTATT 57.707 29.630 1.21 0.00 0.00 1.40
341 342 9.857957 TCGATTAATTAAAAACGCCCTTTATTT 57.142 25.926 1.21 0.00 0.00 1.40
371 372 3.093057 ACTAGTGTTTTTGCCACCAACA 58.907 40.909 0.00 0.00 33.20 3.33
377 378 0.108615 TTTTGCCACCAACAACACCG 60.109 50.000 0.00 0.00 0.00 4.94
382 383 4.178169 ACCAACAACACCGGCCGA 62.178 61.111 30.73 0.00 0.00 5.54
385 386 1.671054 CAACAACACCGGCCGATCT 60.671 57.895 30.73 5.22 0.00 2.75
386 387 1.072505 AACAACACCGGCCGATCTT 59.927 52.632 30.73 11.23 0.00 2.40
393 394 1.376683 CCGGCCGATCTTTTGTCCA 60.377 57.895 30.73 0.00 0.00 4.02
419 420 4.098960 TCGAGTGGATTTATTCGCCTAACT 59.901 41.667 0.00 0.00 33.36 2.24
456 459 2.047655 CCCGGTAGCTTTCGTGCA 60.048 61.111 0.00 0.00 34.99 4.57
463 466 2.094417 GGTAGCTTTCGTGCATCTGTTC 59.906 50.000 0.00 0.00 34.99 3.18
508 512 3.642938 TTCCCCTCGGAAATGTGTG 57.357 52.632 0.00 0.00 45.54 3.82
554 558 3.002656 ACGATCTGCAATGGAAATAAGCG 59.997 43.478 0.00 0.00 0.00 4.68
589 614 5.350504 TGATCCCTTCAAATGTCTCTCTC 57.649 43.478 0.00 0.00 0.00 3.20
658 683 3.886123 ACTAGGGCACGCAATTAAGAAT 58.114 40.909 0.00 0.00 0.00 2.40
705 730 4.471386 AGCAACTGGATAGAGCTAGGAAAA 59.529 41.667 0.00 0.00 37.17 2.29
720 745 1.298859 GAAAAGCGACGCTCCACCAT 61.299 55.000 24.69 2.67 38.25 3.55
728 753 2.151202 GACGCTCCACCATCTTTTGAA 58.849 47.619 0.00 0.00 0.00 2.69
1695 1807 1.300465 CCTCGCCATGGACATCTCG 60.300 63.158 18.40 8.53 0.00 4.04
1707 1819 1.067212 GACATCTCGGCGGACTACATT 59.933 52.381 7.21 0.00 0.00 2.71
1710 1822 0.681887 TCTCGGCGGACTACATTGGA 60.682 55.000 7.21 0.00 0.00 3.53
1776 1888 2.260434 GCGTTCGAGGTGCTGGTA 59.740 61.111 0.00 0.00 0.00 3.25
2103 2215 2.572284 GACTACCGGACGCTGCTT 59.428 61.111 9.46 0.00 0.00 3.91
2146 2258 1.604308 TTCGCCGAGGTGGACTACA 60.604 57.895 2.57 0.00 42.00 2.74
2339 2451 0.605589 CTGACTGGAGCGGAAGAAGT 59.394 55.000 0.00 0.00 0.00 3.01
2340 2452 0.318441 TGACTGGAGCGGAAGAAGTG 59.682 55.000 0.00 0.00 0.00 3.16
2352 2502 2.930682 GGAAGAAGTGGCATTACTCGTC 59.069 50.000 0.00 0.00 0.00 4.20
2357 2507 5.918608 AGAAGTGGCATTACTCGTCATTAT 58.081 37.500 0.00 0.00 0.00 1.28
2359 2509 7.671302 AGAAGTGGCATTACTCGTCATTATAT 58.329 34.615 0.00 0.00 0.00 0.86
2360 2510 8.803235 AGAAGTGGCATTACTCGTCATTATATA 58.197 33.333 0.00 0.00 0.00 0.86
2361 2511 9.587772 GAAGTGGCATTACTCGTCATTATATAT 57.412 33.333 0.00 0.00 0.00 0.86
2525 2682 4.691216 GGAGTTGATCAGGACTTGTACAAC 59.309 45.833 3.59 15.52 40.44 3.32
2663 2820 4.803329 AATCAGCATCCCCTCTAAACAT 57.197 40.909 0.00 0.00 0.00 2.71
2694 2851 1.256812 GGTTCACCAAATGTCCCCTG 58.743 55.000 0.00 0.00 35.64 4.45
2699 2856 0.324645 ACCAAATGTCCCCTGGATGC 60.325 55.000 0.00 0.00 32.73 3.91
2708 2865 2.429058 CCTGGATGCCTGGATCGG 59.571 66.667 0.00 0.00 44.09 4.18
2726 2883 2.546368 TCGGACAGTTCGGACATTTTTG 59.454 45.455 0.08 0.00 0.00 2.44
2727 2884 2.661594 GGACAGTTCGGACATTTTTGC 58.338 47.619 0.00 0.00 0.00 3.68
2729 2886 2.028130 ACAGTTCGGACATTTTTGCCA 58.972 42.857 0.00 0.00 0.00 4.92
2730 2887 2.627699 ACAGTTCGGACATTTTTGCCAT 59.372 40.909 0.00 0.00 0.00 4.40
2731 2888 3.823873 ACAGTTCGGACATTTTTGCCATA 59.176 39.130 0.00 0.00 0.00 2.74
2739 2896 6.096141 TCGGACATTTTTGCCATACATACAAT 59.904 34.615 0.00 0.00 0.00 2.71
2743 2900 3.706802 TTTGCCATACATACAATGCCG 57.293 42.857 0.00 0.00 0.00 5.69
2767 2925 3.074412 ACATCAGTTTGTCCGGATGAAC 58.926 45.455 19.56 19.56 39.52 3.18
2769 2927 1.069513 TCAGTTTGTCCGGATGAACGT 59.930 47.619 20.45 10.90 0.00 3.99
2797 3183 2.613474 CGAACCGGAACCAAATGTAGGA 60.613 50.000 9.46 0.00 0.00 2.94
2806 3192 4.724279 ACCAAATGTAGGAGAGGTTTGT 57.276 40.909 0.00 0.00 0.00 2.83
2807 3193 5.836024 ACCAAATGTAGGAGAGGTTTGTA 57.164 39.130 0.00 0.00 0.00 2.41
2811 3197 2.897350 TGTAGGAGAGGTTTGTAGGCA 58.103 47.619 0.00 0.00 0.00 4.75
2821 3207 1.737793 GTTTGTAGGCATTCAGACCCG 59.262 52.381 0.00 0.00 0.00 5.28
2823 3209 1.883084 GTAGGCATTCAGACCCGCG 60.883 63.158 0.00 0.00 0.00 6.46
2827 3213 4.473520 CATTCAGACCCGCGCCCT 62.474 66.667 0.00 0.00 0.00 5.19
2831 3217 3.849951 CAGACCCGCGCCCTGTAT 61.850 66.667 0.00 0.00 0.00 2.29
2838 3224 4.175337 GCGCCCTGTATGCCTCCA 62.175 66.667 0.00 0.00 0.00 3.86
2848 3234 0.885196 TATGCCTCCAAAAACGTGGC 59.115 50.000 3.98 3.98 43.49 5.01
2849 3235 0.827507 ATGCCTCCAAAAACGTGGCT 60.828 50.000 11.54 0.00 43.57 4.75
2862 3249 2.566913 ACGTGGCTCACATACAAAACA 58.433 42.857 0.00 0.00 33.40 2.83
2870 3257 4.023707 GCTCACATACAAAACACTTGCTCT 60.024 41.667 0.00 0.00 0.00 4.09
2871 3258 5.422666 TCACATACAAAACACTTGCTCTG 57.577 39.130 0.00 0.00 0.00 3.35
2879 3266 1.739562 CACTTGCTCTGGTCTCCGC 60.740 63.158 0.00 0.00 0.00 5.54
2881 3268 4.742201 TTGCTCTGGTCTCCGCGC 62.742 66.667 0.00 0.00 0.00 6.86
2883 3270 3.518998 GCTCTGGTCTCCGCGCTA 61.519 66.667 5.56 0.00 0.00 4.26
2884 3271 3.064987 GCTCTGGTCTCCGCGCTAA 62.065 63.158 5.56 0.00 0.00 3.09
2890 3277 0.651031 GGTCTCCGCGCTAAATTCAC 59.349 55.000 5.56 0.00 0.00 3.18
2892 3279 0.108992 TCTCCGCGCTAAATTCACGT 60.109 50.000 5.56 0.00 0.00 4.49
2893 3280 0.719465 CTCCGCGCTAAATTCACGTT 59.281 50.000 5.56 0.00 0.00 3.99
2899 3286 2.350007 GCGCTAAATTCACGTTGGTCAA 60.350 45.455 0.00 0.00 0.00 3.18
2903 3290 3.791973 AAATTCACGTTGGTCAAAGCA 57.208 38.095 0.00 0.00 0.00 3.91
2904 3291 3.791973 AATTCACGTTGGTCAAAGCAA 57.208 38.095 0.00 0.00 32.60 3.91
2905 3292 3.791973 ATTCACGTTGGTCAAAGCAAA 57.208 38.095 0.00 0.00 37.34 3.68
2911 3298 1.135228 GTTGGTCAAAGCAAACGTGGT 60.135 47.619 0.00 0.00 37.34 4.16
2915 3302 1.263217 GTCAAAGCAAACGTGGTCGAT 59.737 47.619 0.00 0.00 40.62 3.59
2918 3305 0.034896 AAGCAAACGTGGTCGATCCT 59.965 50.000 0.00 0.00 40.62 3.24
2921 3308 2.070783 GCAAACGTGGTCGATCCTAAA 58.929 47.619 0.00 0.00 40.62 1.85
2925 3312 1.749634 ACGTGGTCGATCCTAAAGAGG 59.250 52.381 0.00 0.00 41.40 3.69
2929 3316 1.614413 GGTCGATCCTAAAGAGGCGAT 59.386 52.381 0.00 0.00 43.40 4.58
2930 3317 2.818432 GGTCGATCCTAAAGAGGCGATA 59.182 50.000 0.00 0.00 43.40 2.92
2945 3333 2.993899 GGCGATATGATGTTTCCCTACG 59.006 50.000 0.00 0.00 0.00 3.51
2946 3334 2.412089 GCGATATGATGTTTCCCTACGC 59.588 50.000 0.00 0.00 36.06 4.42
2967 3355 1.202580 GCATTGATACAGAGCCGACCT 60.203 52.381 0.00 0.00 0.00 3.85
2972 3360 1.395826 ATACAGAGCCGACCTGCCTC 61.396 60.000 0.00 0.00 35.14 4.70
2997 3385 2.356330 CGGCCCCCAACTATTTAAGTCA 60.356 50.000 0.00 0.00 37.50 3.41
3032 3420 0.696501 AAACCCTACACCATCGCCTT 59.303 50.000 0.00 0.00 0.00 4.35
3034 3422 0.035439 ACCCTACACCATCGCCTTTG 60.035 55.000 0.00 0.00 0.00 2.77
3039 3427 1.523758 ACACCATCGCCTTTGTTCTC 58.476 50.000 0.00 0.00 0.00 2.87
3046 3434 1.971357 TCGCCTTTGTTCTCTTCTCCT 59.029 47.619 0.00 0.00 0.00 3.69
3047 3435 2.072298 CGCCTTTGTTCTCTTCTCCTG 58.928 52.381 0.00 0.00 0.00 3.86
3051 3439 3.326297 CCTTTGTTCTCTTCTCCTGTCCT 59.674 47.826 0.00 0.00 0.00 3.85
3058 3446 5.941555 TCTCTTCTCCTGTCCTAAAATCC 57.058 43.478 0.00 0.00 0.00 3.01
3059 3447 5.342017 TCTCTTCTCCTGTCCTAAAATCCA 58.658 41.667 0.00 0.00 0.00 3.41
3062 3450 5.548056 TCTTCTCCTGTCCTAAAATCCACTT 59.452 40.000 0.00 0.00 0.00 3.16
3064 3452 4.081642 TCTCCTGTCCTAAAATCCACTTCG 60.082 45.833 0.00 0.00 0.00 3.79
3066 3454 4.081642 TCCTGTCCTAAAATCCACTTCGAG 60.082 45.833 0.00 0.00 0.00 4.04
3086 3474 2.738521 GCAAGGCAGCGTCTCGAA 60.739 61.111 0.00 0.00 0.00 3.71
3087 3475 2.734673 GCAAGGCAGCGTCTCGAAG 61.735 63.158 0.00 0.00 0.00 3.79
3097 3486 0.246635 CGTCTCGAAGTGGTTCCCAT 59.753 55.000 0.00 0.00 35.28 4.00
3098 3487 1.736032 CGTCTCGAAGTGGTTCCCATC 60.736 57.143 0.00 0.00 35.28 3.51
3110 3499 4.489771 CCCATCACCTCCACGGGC 62.490 72.222 0.00 0.00 36.97 6.13
3111 3500 3.402681 CCATCACCTCCACGGGCT 61.403 66.667 0.00 0.00 36.97 5.19
3112 3501 2.671070 CATCACCTCCACGGGCTT 59.329 61.111 0.00 0.00 36.97 4.35
3114 3503 3.019003 ATCACCTCCACGGGCTTCG 62.019 63.158 0.00 0.00 45.88 3.79
3145 3534 3.245650 GGGGGAGGGCTTCATCTC 58.754 66.667 0.00 0.00 0.00 2.75
3146 3535 1.694169 GGGGGAGGGCTTCATCTCA 60.694 63.158 0.00 0.00 0.00 3.27
3147 3536 1.064824 GGGGGAGGGCTTCATCTCAT 61.065 60.000 0.00 0.00 0.00 2.90
3148 3537 0.110104 GGGGAGGGCTTCATCTCATG 59.890 60.000 0.00 0.00 0.00 3.07
3149 3538 0.110104 GGGAGGGCTTCATCTCATGG 59.890 60.000 0.00 0.00 0.00 3.66
3150 3539 0.536915 GGAGGGCTTCATCTCATGGC 60.537 60.000 0.00 0.00 0.00 4.40
3151 3540 0.182061 GAGGGCTTCATCTCATGGCA 59.818 55.000 0.00 0.00 0.00 4.92
3152 3541 0.106819 AGGGCTTCATCTCATGGCAC 60.107 55.000 0.00 0.00 0.00 5.01
3154 3543 1.022735 GGCTTCATCTCATGGCACTG 58.977 55.000 0.00 0.00 0.00 3.66
3155 3544 1.681166 GGCTTCATCTCATGGCACTGT 60.681 52.381 0.00 0.00 0.00 3.55
3167 3626 2.657296 CACTGTCGACCGCGTTGT 60.657 61.111 14.12 0.00 38.98 3.32
3169 3628 3.103911 CTGTCGACCGCGTTGTCC 61.104 66.667 14.12 0.00 38.98 4.02
3170 3629 3.834447 CTGTCGACCGCGTTGTCCA 62.834 63.158 14.12 0.04 38.98 4.02
3171 3630 3.103911 GTCGACCGCGTTGTCCAG 61.104 66.667 3.51 0.00 38.98 3.86
3172 3631 4.351938 TCGACCGCGTTGTCCAGG 62.352 66.667 4.92 0.00 38.98 4.45
3173 3632 4.351938 CGACCGCGTTGTCCAGGA 62.352 66.667 4.92 0.00 31.35 3.86
3177 3636 2.047274 CGCGTTGTCCAGGACCAT 60.047 61.111 17.59 0.00 0.00 3.55
3179 3638 1.296715 GCGTTGTCCAGGACCATCT 59.703 57.895 17.59 0.00 0.00 2.90
3181 3640 1.739371 GCGTTGTCCAGGACCATCTAC 60.739 57.143 17.59 6.50 0.00 2.59
3182 3641 1.548719 CGTTGTCCAGGACCATCTACA 59.451 52.381 17.59 0.00 0.00 2.74
3183 3642 2.168521 CGTTGTCCAGGACCATCTACAT 59.831 50.000 17.59 0.00 0.00 2.29
3184 3643 3.738281 CGTTGTCCAGGACCATCTACATC 60.738 52.174 17.59 0.00 0.00 3.06
3185 3644 2.031870 TGTCCAGGACCATCTACATCG 58.968 52.381 17.59 0.00 0.00 3.84
3186 3645 2.307768 GTCCAGGACCATCTACATCGA 58.692 52.381 8.65 0.00 0.00 3.59
3187 3646 2.894126 GTCCAGGACCATCTACATCGAT 59.106 50.000 8.65 0.00 0.00 3.59
3189 3648 3.321968 TCCAGGACCATCTACATCGATTG 59.678 47.826 0.00 0.00 0.00 2.67
3190 3649 3.062763 CAGGACCATCTACATCGATTGC 58.937 50.000 0.00 0.00 0.00 3.56
3191 3650 2.968574 AGGACCATCTACATCGATTGCT 59.031 45.455 0.00 0.00 0.00 3.91
3193 3652 3.321497 GACCATCTACATCGATTGCTCC 58.679 50.000 0.00 0.00 0.00 4.70
3194 3653 2.037772 ACCATCTACATCGATTGCTCCC 59.962 50.000 0.00 0.00 0.00 4.30
3195 3654 2.301296 CCATCTACATCGATTGCTCCCT 59.699 50.000 0.00 0.00 0.00 4.20
3196 3655 3.583806 CATCTACATCGATTGCTCCCTC 58.416 50.000 0.00 0.00 0.00 4.30
3198 3657 3.234353 TCTACATCGATTGCTCCCTCAT 58.766 45.455 0.00 0.00 0.00 2.90
3199 3658 4.407365 TCTACATCGATTGCTCCCTCATA 58.593 43.478 0.00 0.00 0.00 2.15
3201 3660 2.301296 ACATCGATTGCTCCCTCATAGG 59.699 50.000 0.00 0.00 34.30 2.57
3202 3661 2.088104 TCGATTGCTCCCTCATAGGT 57.912 50.000 0.00 0.00 31.93 3.08
3203 3662 1.688735 TCGATTGCTCCCTCATAGGTG 59.311 52.381 0.00 0.00 31.93 4.00
3204 3663 1.688735 CGATTGCTCCCTCATAGGTGA 59.311 52.381 0.00 0.00 31.93 4.02
3205 3664 2.103094 CGATTGCTCCCTCATAGGTGAA 59.897 50.000 0.00 0.00 31.93 3.18
3206 3665 3.737850 GATTGCTCCCTCATAGGTGAAG 58.262 50.000 0.00 0.00 31.93 3.02
3207 3666 2.254152 TGCTCCCTCATAGGTGAAGT 57.746 50.000 0.00 0.00 31.93 3.01
3209 3668 1.067821 GCTCCCTCATAGGTGAAGTCG 59.932 57.143 0.00 0.00 31.93 4.18
3210 3669 2.656002 CTCCCTCATAGGTGAAGTCGA 58.344 52.381 0.00 0.00 31.93 4.20
3221 3680 4.805744 AGGTGAAGTCGAACCTATATCCT 58.194 43.478 4.67 0.00 45.15 3.24
3222 3681 4.828387 AGGTGAAGTCGAACCTATATCCTC 59.172 45.833 4.67 0.00 45.15 3.71
3224 3683 3.819337 TGAAGTCGAACCTATATCCTCGG 59.181 47.826 0.00 0.00 32.25 4.63
3226 3685 3.410508 AGTCGAACCTATATCCTCGGAC 58.589 50.000 0.00 0.00 32.25 4.79
3227 3686 3.072768 AGTCGAACCTATATCCTCGGACT 59.927 47.826 0.00 0.00 32.25 3.85
3228 3687 4.285517 AGTCGAACCTATATCCTCGGACTA 59.714 45.833 0.00 0.00 32.25 2.59
3229 3688 4.391523 GTCGAACCTATATCCTCGGACTAC 59.608 50.000 0.00 0.00 32.25 2.73
3230 3689 4.285517 TCGAACCTATATCCTCGGACTACT 59.714 45.833 0.00 0.00 32.25 2.57
3231 3690 5.481824 TCGAACCTATATCCTCGGACTACTA 59.518 44.000 0.00 0.00 32.25 1.82
3232 3691 5.811613 CGAACCTATATCCTCGGACTACTAG 59.188 48.000 0.00 0.00 0.00 2.57
3233 3692 5.697082 ACCTATATCCTCGGACTACTAGG 57.303 47.826 0.00 8.98 0.00 3.02
3234 3693 5.348833 ACCTATATCCTCGGACTACTAGGA 58.651 45.833 14.16 0.00 43.38 2.94
3235 3694 5.426185 ACCTATATCCTCGGACTACTAGGAG 59.574 48.000 0.00 0.00 42.53 3.69
3236 3695 2.572209 ATCCTCGGACTACTAGGAGC 57.428 55.000 0.36 0.00 42.53 4.70
3237 3696 1.210538 TCCTCGGACTACTAGGAGCA 58.789 55.000 0.36 0.00 34.46 4.26
3238 3697 1.141254 TCCTCGGACTACTAGGAGCAG 59.859 57.143 0.36 0.00 34.46 4.24
3239 3698 1.600023 CTCGGACTACTAGGAGCAGG 58.400 60.000 0.36 0.00 0.00 4.85
3240 3699 1.141254 CTCGGACTACTAGGAGCAGGA 59.859 57.143 0.36 0.00 0.00 3.86
3241 3700 1.775459 TCGGACTACTAGGAGCAGGAT 59.225 52.381 0.36 0.00 0.00 3.24
3242 3701 2.156098 CGGACTACTAGGAGCAGGATC 58.844 57.143 0.36 0.00 0.00 3.36
3243 3702 2.487445 CGGACTACTAGGAGCAGGATCA 60.487 54.545 0.36 0.00 0.00 2.92
3244 3703 3.567397 GGACTACTAGGAGCAGGATCAA 58.433 50.000 0.36 0.00 0.00 2.57
3245 3704 3.319689 GGACTACTAGGAGCAGGATCAAC 59.680 52.174 0.36 0.00 0.00 3.18
3246 3705 3.301274 ACTACTAGGAGCAGGATCAACC 58.699 50.000 0.36 0.00 39.35 3.77
3247 3706 1.115467 ACTAGGAGCAGGATCAACCG 58.885 55.000 0.00 0.00 44.74 4.44
3248 3707 0.249657 CTAGGAGCAGGATCAACCGC 60.250 60.000 0.00 0.00 44.74 5.68
3249 3708 1.686325 TAGGAGCAGGATCAACCGCC 61.686 60.000 0.00 0.00 44.74 6.13
3250 3709 2.514824 GAGCAGGATCAACCGCCC 60.515 66.667 0.00 0.00 44.74 6.13
3251 3710 3.329542 GAGCAGGATCAACCGCCCA 62.330 63.158 0.00 0.00 44.74 5.36
3252 3711 2.124151 GCAGGATCAACCGCCCAT 60.124 61.111 0.00 0.00 44.74 4.00
3253 3712 2.189499 GCAGGATCAACCGCCCATC 61.189 63.158 0.00 0.00 44.74 3.51
3254 3713 1.526917 CAGGATCAACCGCCCATCC 60.527 63.158 0.00 0.00 44.74 3.51
3255 3714 1.694169 AGGATCAACCGCCCATCCT 60.694 57.895 0.00 0.00 41.48 3.24
3256 3715 1.227973 GGATCAACCGCCCATCCTC 60.228 63.158 0.00 0.00 34.31 3.71
3257 3716 1.526887 GATCAACCGCCCATCCTCA 59.473 57.895 0.00 0.00 0.00 3.86
3258 3717 0.815615 GATCAACCGCCCATCCTCAC 60.816 60.000 0.00 0.00 0.00 3.51
3259 3718 2.593468 ATCAACCGCCCATCCTCACG 62.593 60.000 0.00 0.00 0.00 4.35
3280 3739 4.430423 GCTGCCGCGACGAACAAG 62.430 66.667 8.23 0.00 0.00 3.16
3281 3740 4.430423 CTGCCGCGACGAACAAGC 62.430 66.667 8.23 0.00 0.00 4.01
3283 3742 4.007940 GCCGCGACGAACAAGCAA 62.008 61.111 8.23 0.00 0.00 3.91
3284 3743 2.860293 CCGCGACGAACAAGCAAT 59.140 55.556 8.23 0.00 0.00 3.56
3285 3744 1.206578 CCGCGACGAACAAGCAATT 59.793 52.632 8.23 0.00 0.00 2.32
3286 3745 0.385473 CCGCGACGAACAAGCAATTT 60.385 50.000 8.23 0.00 0.00 1.82
3287 3746 0.697010 CGCGACGAACAAGCAATTTG 59.303 50.000 0.00 0.00 42.68 2.32
3288 3747 0.430858 GCGACGAACAAGCAATTTGC 59.569 50.000 13.55 13.55 45.46 3.68
3297 3756 3.846754 GCAATTTGCGTGGCAGAC 58.153 55.556 5.49 0.00 40.61 3.51
3306 3765 2.581354 GTGGCAGACGATGGAGCT 59.419 61.111 0.00 0.00 0.00 4.09
3307 3766 1.078848 GTGGCAGACGATGGAGCTT 60.079 57.895 0.00 0.00 0.00 3.74
3308 3767 1.086634 GTGGCAGACGATGGAGCTTC 61.087 60.000 0.00 0.00 0.00 3.86
3309 3768 1.260538 TGGCAGACGATGGAGCTTCT 61.261 55.000 0.00 0.00 0.00 2.85
3310 3769 0.809241 GGCAGACGATGGAGCTTCTG 60.809 60.000 6.49 6.49 37.26 3.02
3311 3770 0.108424 GCAGACGATGGAGCTTCTGT 60.108 55.000 11.46 0.00 36.75 3.41
3312 3771 1.674221 GCAGACGATGGAGCTTCTGTT 60.674 52.381 11.46 0.00 36.75 3.16
3313 3772 1.998315 CAGACGATGGAGCTTCTGTTG 59.002 52.381 3.15 0.00 31.64 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.148825 ATGAGCCGCGTCCCTGTC 62.149 66.667 4.92 0.00 0.00 3.51
1 2 4.148825 GATGAGCCGCGTCCCTGT 62.149 66.667 4.92 0.00 0.00 4.00
6 7 4.451150 TGGGTGATGAGCCGCGTC 62.451 66.667 4.92 0.00 43.35 5.19
7 8 4.457496 CTGGGTGATGAGCCGCGT 62.457 66.667 4.92 0.00 43.35 6.01
8 9 4.457496 ACTGGGTGATGAGCCGCG 62.457 66.667 0.00 0.00 43.35 6.46
9 10 2.821366 CACTGGGTGATGAGCCGC 60.821 66.667 0.00 0.00 43.35 6.53
10 11 2.665000 ACACTGGGTGATGAGCCG 59.335 61.111 4.62 0.00 43.35 5.52
19 20 1.073722 CAGGCATCACACACTGGGT 59.926 57.895 0.00 0.00 0.00 4.51
20 21 0.957395 GTCAGGCATCACACACTGGG 60.957 60.000 0.00 0.00 0.00 4.45
21 22 0.957395 GGTCAGGCATCACACACTGG 60.957 60.000 0.00 0.00 0.00 4.00
22 23 1.293963 CGGTCAGGCATCACACACTG 61.294 60.000 0.00 0.00 0.00 3.66
23 24 1.004560 CGGTCAGGCATCACACACT 60.005 57.895 0.00 0.00 0.00 3.55
24 25 2.680913 GCGGTCAGGCATCACACAC 61.681 63.158 0.00 0.00 0.00 3.82
25 26 2.358615 GCGGTCAGGCATCACACA 60.359 61.111 0.00 0.00 0.00 3.72
26 27 3.490759 CGCGGTCAGGCATCACAC 61.491 66.667 0.00 0.00 0.00 3.82
27 28 3.932580 GACGCGGTCAGGCATCACA 62.933 63.158 12.47 0.00 32.09 3.58
28 29 3.188786 GACGCGGTCAGGCATCAC 61.189 66.667 12.47 0.00 32.09 3.06
29 30 4.794439 CGACGCGGTCAGGCATCA 62.794 66.667 12.47 0.00 32.09 3.07
53 54 1.612146 TCGAGCATTCCCTGGTGGA 60.612 57.895 0.00 0.00 43.18 4.02
54 55 1.450312 GTCGAGCATTCCCTGGTGG 60.450 63.158 0.00 0.00 35.19 4.61
55 56 0.107508 ATGTCGAGCATTCCCTGGTG 60.108 55.000 0.00 0.00 35.19 4.17
56 57 0.107508 CATGTCGAGCATTCCCTGGT 60.108 55.000 0.00 0.00 35.19 4.00
57 58 0.178767 TCATGTCGAGCATTCCCTGG 59.821 55.000 0.00 0.00 35.19 4.45
58 59 1.667724 GTTCATGTCGAGCATTCCCTG 59.332 52.381 0.00 0.00 35.19 4.45
59 60 1.556911 AGTTCATGTCGAGCATTCCCT 59.443 47.619 0.00 0.00 35.19 4.20
60 61 1.667724 CAGTTCATGTCGAGCATTCCC 59.332 52.381 0.00 0.00 35.19 3.97
61 62 1.667724 CCAGTTCATGTCGAGCATTCC 59.332 52.381 0.00 0.00 35.19 3.01
62 63 1.063174 GCCAGTTCATGTCGAGCATTC 59.937 52.381 0.00 0.00 35.19 2.67
63 64 1.089920 GCCAGTTCATGTCGAGCATT 58.910 50.000 0.00 0.00 35.19 3.56
64 65 0.745845 GGCCAGTTCATGTCGAGCAT 60.746 55.000 0.00 0.00 38.60 3.79
65 66 1.375908 GGCCAGTTCATGTCGAGCA 60.376 57.895 0.00 0.00 0.00 4.26
66 67 2.456119 CGGCCAGTTCATGTCGAGC 61.456 63.158 2.24 0.00 0.00 5.03
67 68 1.811266 CCGGCCAGTTCATGTCGAG 60.811 63.158 2.24 0.00 0.00 4.04
68 69 2.225791 CTCCGGCCAGTTCATGTCGA 62.226 60.000 2.24 0.00 0.00 4.20
69 70 1.811266 CTCCGGCCAGTTCATGTCG 60.811 63.158 2.24 0.00 0.00 4.35
70 71 2.109126 GCTCCGGCCAGTTCATGTC 61.109 63.158 2.24 0.00 0.00 3.06
71 72 2.045926 GCTCCGGCCAGTTCATGT 60.046 61.111 2.24 0.00 0.00 3.21
72 73 2.110967 CAGCTCCGGCCAGTTCATG 61.111 63.158 2.24 0.00 39.73 3.07
73 74 2.270205 CAGCTCCGGCCAGTTCAT 59.730 61.111 2.24 0.00 39.73 2.57
74 75 2.922503 TCAGCTCCGGCCAGTTCA 60.923 61.111 2.24 0.00 39.73 3.18
75 76 2.435059 GTCAGCTCCGGCCAGTTC 60.435 66.667 2.24 0.00 39.73 3.01
76 77 2.925170 AGTCAGCTCCGGCCAGTT 60.925 61.111 2.24 0.00 39.73 3.16
77 78 3.699894 CAGTCAGCTCCGGCCAGT 61.700 66.667 2.24 0.00 39.73 4.00
78 79 4.463879 CCAGTCAGCTCCGGCCAG 62.464 72.222 2.24 0.00 39.73 4.85
85 86 4.742201 TTCCGCGCCAGTCAGCTC 62.742 66.667 0.00 0.00 0.00 4.09
86 87 4.749310 CTTCCGCGCCAGTCAGCT 62.749 66.667 0.00 0.00 0.00 4.24
87 88 4.742201 TCTTCCGCGCCAGTCAGC 62.742 66.667 0.00 0.00 0.00 4.26
88 89 2.048222 TTCTTCCGCGCCAGTCAG 60.048 61.111 0.00 0.00 0.00 3.51
89 90 2.048222 CTTCTTCCGCGCCAGTCA 60.048 61.111 0.00 0.00 0.00 3.41
90 91 2.048127 ACTTCTTCCGCGCCAGTC 60.048 61.111 0.00 0.00 0.00 3.51
91 92 1.812686 TACACTTCTTCCGCGCCAGT 61.813 55.000 0.00 0.00 0.00 4.00
92 93 1.078759 CTACACTTCTTCCGCGCCAG 61.079 60.000 0.00 0.00 0.00 4.85
93 94 1.080093 CTACACTTCTTCCGCGCCA 60.080 57.895 0.00 0.00 0.00 5.69
94 95 1.077089 GACTACACTTCTTCCGCGCC 61.077 60.000 0.00 0.00 0.00 6.53
95 96 1.077089 GGACTACACTTCTTCCGCGC 61.077 60.000 0.00 0.00 0.00 6.86
96 97 0.797249 CGGACTACACTTCTTCCGCG 60.797 60.000 0.00 0.00 44.16 6.46
97 98 3.031660 CGGACTACACTTCTTCCGC 57.968 57.895 0.00 0.00 44.16 5.54
99 100 1.067071 CACCCGGACTACACTTCTTCC 60.067 57.143 0.73 0.00 0.00 3.46
100 101 1.672145 GCACCCGGACTACACTTCTTC 60.672 57.143 0.73 0.00 0.00 2.87
101 102 0.320697 GCACCCGGACTACACTTCTT 59.679 55.000 0.73 0.00 0.00 2.52
102 103 0.542232 AGCACCCGGACTACACTTCT 60.542 55.000 0.73 0.00 0.00 2.85
103 104 1.180029 TAGCACCCGGACTACACTTC 58.820 55.000 0.73 0.00 0.00 3.01
104 105 1.755380 GATAGCACCCGGACTACACTT 59.245 52.381 0.73 0.00 0.00 3.16
105 106 1.063867 AGATAGCACCCGGACTACACT 60.064 52.381 0.73 2.81 0.00 3.55
106 107 1.400737 AGATAGCACCCGGACTACAC 58.599 55.000 0.73 0.51 0.00 2.90
107 108 2.154567 AAGATAGCACCCGGACTACA 57.845 50.000 0.73 0.00 0.00 2.74
108 109 2.483188 CCAAAGATAGCACCCGGACTAC 60.483 54.545 0.73 0.00 0.00 2.73
109 110 1.760613 CCAAAGATAGCACCCGGACTA 59.239 52.381 0.73 1.52 0.00 2.59
110 111 0.541863 CCAAAGATAGCACCCGGACT 59.458 55.000 0.73 0.00 0.00 3.85
111 112 0.252197 ACCAAAGATAGCACCCGGAC 59.748 55.000 0.73 0.00 0.00 4.79
112 113 0.251916 CACCAAAGATAGCACCCGGA 59.748 55.000 0.73 0.00 0.00 5.14
113 114 0.748005 CCACCAAAGATAGCACCCGG 60.748 60.000 0.00 0.00 0.00 5.73
114 115 0.035439 ACCACCAAAGATAGCACCCG 60.035 55.000 0.00 0.00 0.00 5.28
115 116 1.463674 CACCACCAAAGATAGCACCC 58.536 55.000 0.00 0.00 0.00 4.61
116 117 1.271926 ACCACCACCAAAGATAGCACC 60.272 52.381 0.00 0.00 0.00 5.01
117 118 2.200373 ACCACCACCAAAGATAGCAC 57.800 50.000 0.00 0.00 0.00 4.40
118 119 2.890311 CAAACCACCACCAAAGATAGCA 59.110 45.455 0.00 0.00 0.00 3.49
119 120 2.352715 GCAAACCACCACCAAAGATAGC 60.353 50.000 0.00 0.00 0.00 2.97
120 121 3.057315 CAGCAAACCACCACCAAAGATAG 60.057 47.826 0.00 0.00 0.00 2.08
121 122 2.890311 CAGCAAACCACCACCAAAGATA 59.110 45.455 0.00 0.00 0.00 1.98
122 123 1.688197 CAGCAAACCACCACCAAAGAT 59.312 47.619 0.00 0.00 0.00 2.40
123 124 1.110442 CAGCAAACCACCACCAAAGA 58.890 50.000 0.00 0.00 0.00 2.52
124 125 0.823460 ACAGCAAACCACCACCAAAG 59.177 50.000 0.00 0.00 0.00 2.77
125 126 1.066573 CAACAGCAAACCACCACCAAA 60.067 47.619 0.00 0.00 0.00 3.28
126 127 0.534412 CAACAGCAAACCACCACCAA 59.466 50.000 0.00 0.00 0.00 3.67
127 128 0.613292 ACAACAGCAAACCACCACCA 60.613 50.000 0.00 0.00 0.00 4.17
128 129 0.534873 AACAACAGCAAACCACCACC 59.465 50.000 0.00 0.00 0.00 4.61
129 130 1.067213 ACAACAACAGCAAACCACCAC 60.067 47.619 0.00 0.00 0.00 4.16
130 131 1.067283 CACAACAACAGCAAACCACCA 60.067 47.619 0.00 0.00 0.00 4.17
131 132 1.203523 TCACAACAACAGCAAACCACC 59.796 47.619 0.00 0.00 0.00 4.61
132 133 2.094752 ACTCACAACAACAGCAAACCAC 60.095 45.455 0.00 0.00 0.00 4.16
133 134 2.094803 CACTCACAACAACAGCAAACCA 60.095 45.455 0.00 0.00 0.00 3.67
134 135 2.094752 ACACTCACAACAACAGCAAACC 60.095 45.455 0.00 0.00 0.00 3.27
135 136 3.216147 ACACTCACAACAACAGCAAAC 57.784 42.857 0.00 0.00 0.00 2.93
136 137 3.932545 AACACTCACAACAACAGCAAA 57.067 38.095 0.00 0.00 0.00 3.68
137 138 4.380023 GGTTAACACTCACAACAACAGCAA 60.380 41.667 8.10 0.00 0.00 3.91
138 139 3.127895 GGTTAACACTCACAACAACAGCA 59.872 43.478 8.10 0.00 0.00 4.41
139 140 3.127895 TGGTTAACACTCACAACAACAGC 59.872 43.478 8.10 0.00 0.00 4.40
140 141 4.658071 GTGGTTAACACTCACAACAACAG 58.342 43.478 8.10 0.00 46.72 3.16
141 142 4.688511 GTGGTTAACACTCACAACAACA 57.311 40.909 8.10 0.00 46.72 3.33
159 160 6.894339 AAATAAAAAGTCCTACCACAGTGG 57.106 37.500 18.93 18.93 45.02 4.00
208 209 4.892934 AGGATGCACACAACCTTCTAAAAA 59.107 37.500 0.00 0.00 46.30 1.94
209 210 4.469657 AGGATGCACACAACCTTCTAAAA 58.530 39.130 0.00 0.00 46.30 1.52
210 211 4.098914 AGGATGCACACAACCTTCTAAA 57.901 40.909 0.00 0.00 46.30 1.85
211 212 3.788227 AGGATGCACACAACCTTCTAA 57.212 42.857 0.00 0.00 46.30 2.10
217 218 1.888512 ACATTGAGGATGCACACAACC 59.111 47.619 0.00 0.00 39.47 3.77
218 219 2.816087 AGACATTGAGGATGCACACAAC 59.184 45.455 0.00 0.00 39.47 3.32
219 220 3.076621 GAGACATTGAGGATGCACACAA 58.923 45.455 0.00 0.00 39.47 3.33
220 221 2.038820 TGAGACATTGAGGATGCACACA 59.961 45.455 0.00 0.00 39.47 3.72
221 222 2.703416 TGAGACATTGAGGATGCACAC 58.297 47.619 0.00 0.00 39.47 3.82
222 223 3.639672 ATGAGACATTGAGGATGCACA 57.360 42.857 0.00 0.00 39.47 4.57
223 224 4.978083 AAATGAGACATTGAGGATGCAC 57.022 40.909 0.00 0.00 39.47 4.57
224 225 4.768448 ACAAAATGAGACATTGAGGATGCA 59.232 37.500 0.00 0.00 39.47 3.96
225 226 5.320549 ACAAAATGAGACATTGAGGATGC 57.679 39.130 0.00 0.00 39.47 3.91
226 227 6.097356 CCAACAAAATGAGACATTGAGGATG 58.903 40.000 0.00 0.00 41.71 3.51
227 228 5.776716 ACCAACAAAATGAGACATTGAGGAT 59.223 36.000 0.00 0.00 31.81 3.24
228 229 5.009911 CACCAACAAAATGAGACATTGAGGA 59.990 40.000 0.00 0.00 31.81 3.71
229 230 5.224888 CACCAACAAAATGAGACATTGAGG 58.775 41.667 0.00 0.00 0.00 3.86
230 231 4.682860 GCACCAACAAAATGAGACATTGAG 59.317 41.667 0.00 0.00 0.00 3.02
231 232 4.619973 GCACCAACAAAATGAGACATTGA 58.380 39.130 0.00 0.00 0.00 2.57
232 233 3.426191 CGCACCAACAAAATGAGACATTG 59.574 43.478 0.00 0.00 0.00 2.82
233 234 3.552684 CCGCACCAACAAAATGAGACATT 60.553 43.478 0.00 0.00 0.00 2.71
234 235 2.030007 CCGCACCAACAAAATGAGACAT 60.030 45.455 0.00 0.00 0.00 3.06
235 236 1.336440 CCGCACCAACAAAATGAGACA 59.664 47.619 0.00 0.00 0.00 3.41
236 237 1.606668 TCCGCACCAACAAAATGAGAC 59.393 47.619 0.00 0.00 0.00 3.36
237 238 1.974265 TCCGCACCAACAAAATGAGA 58.026 45.000 0.00 0.00 0.00 3.27
238 239 2.664916 CTTCCGCACCAACAAAATGAG 58.335 47.619 0.00 0.00 0.00 2.90
239 240 1.269517 GCTTCCGCACCAACAAAATGA 60.270 47.619 0.00 0.00 35.78 2.57
240 241 1.139163 GCTTCCGCACCAACAAAATG 58.861 50.000 0.00 0.00 35.78 2.32
241 242 0.033366 GGCTTCCGCACCAACAAAAT 59.967 50.000 0.00 0.00 38.10 1.82
242 243 1.439644 GGCTTCCGCACCAACAAAA 59.560 52.632 0.00 0.00 38.10 2.44
243 244 2.840066 CGGCTTCCGCACCAACAAA 61.840 57.895 0.00 0.00 41.17 2.83
244 245 3.283684 CGGCTTCCGCACCAACAA 61.284 61.111 0.00 0.00 41.17 2.83
250 251 3.887335 TAACACCCGGCTTCCGCAC 62.887 63.158 0.00 0.00 46.86 5.34
251 252 2.472414 AATAACACCCGGCTTCCGCA 62.472 55.000 0.00 0.00 46.86 5.69
252 253 0.462403 TAATAACACCCGGCTTCCGC 60.462 55.000 0.00 0.00 46.86 5.54
254 255 2.704464 ACTAATAACACCCGGCTTCC 57.296 50.000 0.00 0.00 0.00 3.46
255 256 5.211174 AGATACTAATAACACCCGGCTTC 57.789 43.478 0.00 0.00 0.00 3.86
256 257 5.625568 AAGATACTAATAACACCCGGCTT 57.374 39.130 0.00 0.00 0.00 4.35
257 258 5.365619 CAAAGATACTAATAACACCCGGCT 58.634 41.667 0.00 0.00 0.00 5.52
258 259 4.024302 GCAAAGATACTAATAACACCCGGC 60.024 45.833 0.00 0.00 0.00 6.13
259 260 4.210537 CGCAAAGATACTAATAACACCCGG 59.789 45.833 0.00 0.00 0.00 5.73
260 261 5.045215 TCGCAAAGATACTAATAACACCCG 58.955 41.667 0.00 0.00 0.00 5.28
261 262 7.871463 ACTATCGCAAAGATACTAATAACACCC 59.129 37.037 0.00 0.00 40.66 4.61
262 263 8.813643 ACTATCGCAAAGATACTAATAACACC 57.186 34.615 0.00 0.00 40.66 4.16
293 294 9.927668 ATCGACTCATTTTTCAACCAAAATAAT 57.072 25.926 0.00 0.00 35.09 1.28
294 295 9.757227 AATCGACTCATTTTTCAACCAAAATAA 57.243 25.926 0.00 0.00 35.09 1.40
296 297 9.757227 TTAATCGACTCATTTTTCAACCAAAAT 57.243 25.926 0.00 0.00 36.90 1.82
297 298 9.757227 ATTAATCGACTCATTTTTCAACCAAAA 57.243 25.926 0.00 0.00 31.73 2.44
298 299 9.757227 AATTAATCGACTCATTTTTCAACCAAA 57.243 25.926 0.00 0.00 0.00 3.28
307 308 8.856247 GGCGTTTTTAATTAATCGACTCATTTT 58.144 29.630 16.42 0.00 0.00 1.82
308 309 7.486870 GGGCGTTTTTAATTAATCGACTCATTT 59.513 33.333 17.08 0.00 0.00 2.32
309 310 6.970613 GGGCGTTTTTAATTAATCGACTCATT 59.029 34.615 17.08 0.00 0.00 2.57
310 311 6.317893 AGGGCGTTTTTAATTAATCGACTCAT 59.682 34.615 17.08 7.04 0.00 2.90
311 312 5.644636 AGGGCGTTTTTAATTAATCGACTCA 59.355 36.000 17.08 0.00 0.00 3.41
312 313 6.115450 AGGGCGTTTTTAATTAATCGACTC 57.885 37.500 17.08 10.91 0.00 3.36
313 314 6.505044 AAGGGCGTTTTTAATTAATCGACT 57.495 33.333 17.08 12.44 0.00 4.18
314 315 8.845942 ATAAAGGGCGTTTTTAATTAATCGAC 57.154 30.769 10.73 14.43 0.00 4.20
315 316 9.857957 AAATAAAGGGCGTTTTTAATTAATCGA 57.142 25.926 10.73 0.00 0.00 3.59
318 319 9.945904 TGGAAATAAAGGGCGTTTTTAATTAAT 57.054 25.926 10.73 0.00 0.00 1.40
319 320 9.945904 ATGGAAATAAAGGGCGTTTTTAATTAA 57.054 25.926 10.73 0.00 0.00 1.40
320 321 9.589111 GATGGAAATAAAGGGCGTTTTTAATTA 57.411 29.630 10.73 0.00 0.00 1.40
321 322 8.097662 TGATGGAAATAAAGGGCGTTTTTAATT 58.902 29.630 10.73 2.23 0.00 1.40
322 323 7.616313 TGATGGAAATAAAGGGCGTTTTTAAT 58.384 30.769 10.73 0.00 0.00 1.40
323 324 6.994221 TGATGGAAATAAAGGGCGTTTTTAA 58.006 32.000 10.73 0.00 0.00 1.52
324 325 6.591750 TGATGGAAATAAAGGGCGTTTTTA 57.408 33.333 10.73 0.54 0.00 1.52
325 326 5.476091 TGATGGAAATAAAGGGCGTTTTT 57.524 34.783 10.73 0.00 0.00 1.94
326 327 4.620567 GCTGATGGAAATAAAGGGCGTTTT 60.621 41.667 10.73 0.69 0.00 2.43
327 328 3.119137 GCTGATGGAAATAAAGGGCGTTT 60.119 43.478 10.30 10.30 0.00 3.60
328 329 2.427095 GCTGATGGAAATAAAGGGCGTT 59.573 45.455 0.00 0.00 0.00 4.84
329 330 2.024414 GCTGATGGAAATAAAGGGCGT 58.976 47.619 0.00 0.00 0.00 5.68
330 331 2.023673 TGCTGATGGAAATAAAGGGCG 58.976 47.619 0.00 0.00 0.00 6.13
331 332 3.026694 AGTGCTGATGGAAATAAAGGGC 58.973 45.455 0.00 0.00 0.00 5.19
332 333 5.297776 CACTAGTGCTGATGGAAATAAAGGG 59.702 44.000 10.54 0.00 0.00 3.95
333 334 5.882557 ACACTAGTGCTGATGGAAATAAAGG 59.117 40.000 22.90 0.00 0.00 3.11
334 335 6.992063 ACACTAGTGCTGATGGAAATAAAG 57.008 37.500 22.90 0.00 0.00 1.85
335 336 7.759489 AAACACTAGTGCTGATGGAAATAAA 57.241 32.000 22.90 0.00 0.00 1.40
336 337 7.759489 AAAACACTAGTGCTGATGGAAATAA 57.241 32.000 22.90 0.00 0.00 1.40
337 338 7.592938 CAAAAACACTAGTGCTGATGGAAATA 58.407 34.615 22.90 0.00 0.00 1.40
338 339 6.449698 CAAAAACACTAGTGCTGATGGAAAT 58.550 36.000 22.90 0.00 0.00 2.17
339 340 5.735922 GCAAAAACACTAGTGCTGATGGAAA 60.736 40.000 22.90 0.00 34.13 3.13
340 341 4.261572 GCAAAAACACTAGTGCTGATGGAA 60.262 41.667 22.90 0.00 34.13 3.53
341 342 3.253188 GCAAAAACACTAGTGCTGATGGA 59.747 43.478 22.90 0.00 34.13 3.41
342 343 3.568538 GCAAAAACACTAGTGCTGATGG 58.431 45.455 22.90 9.38 34.13 3.51
343 344 3.004629 TGGCAAAAACACTAGTGCTGATG 59.995 43.478 22.90 16.74 37.17 3.07
371 372 0.536460 ACAAAAGATCGGCCGGTGTT 60.536 50.000 27.83 22.04 0.00 3.32
377 378 2.477863 CGATTTGGACAAAAGATCGGCC 60.478 50.000 9.99 0.00 33.56 6.13
382 383 4.651778 TCCACTCGATTTGGACAAAAGAT 58.348 39.130 11.07 0.00 38.28 2.40
409 410 3.249999 GCGTGCAAGTTAGGCGAA 58.750 55.556 0.59 0.00 0.00 4.70
508 512 1.527311 GACTTTGAGTGGCGACTTGTC 59.473 52.381 1.83 6.22 30.16 3.18
554 558 4.466370 TGAAGGGATCATATACGTCCATCC 59.534 45.833 0.00 0.00 33.62 3.51
589 614 0.676782 ATTGTCGAGGAAAAGGCGGG 60.677 55.000 0.00 0.00 0.00 6.13
658 683 2.360726 CATGCCCAGCAGCTCACA 60.361 61.111 0.00 0.00 43.65 3.58
705 730 2.172483 AAAGATGGTGGAGCGTCGCT 62.172 55.000 21.92 21.92 43.88 4.93
720 745 0.601841 GAGCCGTCGGGTTCAAAAGA 60.602 55.000 18.55 0.00 42.66 2.52
765 790 1.588597 CAGTTGCTCTGCTCGGAGA 59.411 57.895 9.69 0.00 37.36 3.71
1182 1291 4.162690 GCCCGCTCGATGGTCCTT 62.163 66.667 3.45 0.00 0.00 3.36
1408 1517 2.103340 GCGCTCGTCCTCCTCTTC 59.897 66.667 0.00 0.00 0.00 2.87
1410 1519 3.137459 CTGCGCTCGTCCTCCTCT 61.137 66.667 9.73 0.00 0.00 3.69
1435 1544 2.137528 TGGTGACCTGGACGAGCAA 61.138 57.895 2.11 0.00 0.00 3.91
1695 1807 0.249398 AGTGTCCAATGTAGTCCGCC 59.751 55.000 0.00 0.00 0.00 6.13
1710 1822 3.199071 TGTTGTACTGGGACTTGAAGTGT 59.801 43.478 0.90 0.00 0.00 3.55
1812 1924 2.654877 GTGGAGTCCGGCTCGAAA 59.345 61.111 16.39 5.52 45.03 3.46
2070 2182 1.830279 AGTCCGACGTGATCTGGTAA 58.170 50.000 0.00 0.00 0.00 2.85
2103 2215 4.337060 CGCGTCCAGTCCGACACA 62.337 66.667 0.00 0.00 32.74 3.72
2163 2275 4.295119 GTCAGGGGCACGACGTGT 62.295 66.667 27.32 6.43 35.75 4.49
2241 2353 2.665000 CACTGGGTGATGAGCCGT 59.335 61.111 0.00 0.00 43.35 5.68
2422 2572 3.527533 CCATCAACCAATCCAATGCAAG 58.472 45.455 0.00 0.00 0.00 4.01
2579 2736 9.851686 AATGCTTAATTAGACACCTTGATATGA 57.148 29.630 0.00 0.00 0.00 2.15
2612 2769 8.129211 GCCTTAAGTACCAATGCTTATTTGTAG 58.871 37.037 0.97 0.00 33.60 2.74
2626 2783 4.830046 TGCTGATTTTTGCCTTAAGTACCA 59.170 37.500 0.97 0.00 0.00 3.25
2630 2787 4.081476 GGGATGCTGATTTTTGCCTTAAGT 60.081 41.667 0.97 0.00 0.00 2.24
2663 2820 2.181125 TGGTGAACCGCCTTATACTCA 58.819 47.619 0.00 0.00 39.43 3.41
2694 2851 1.070445 CTGTCCGATCCAGGCATCC 59.930 63.158 0.00 0.00 0.00 3.51
2699 2856 1.141881 CCGAACTGTCCGATCCAGG 59.858 63.158 0.00 0.00 34.16 4.45
2708 2865 2.034053 TGGCAAAAATGTCCGAACTGTC 59.966 45.455 0.00 0.00 0.00 3.51
2726 2883 2.480419 GTCTCGGCATTGTATGTATGGC 59.520 50.000 0.00 0.00 43.06 4.40
2727 2884 3.727726 TGTCTCGGCATTGTATGTATGG 58.272 45.455 0.00 0.00 0.00 2.74
2729 2886 5.213891 TGATGTCTCGGCATTGTATGTAT 57.786 39.130 0.00 0.00 0.00 2.29
2730 2887 4.099419 ACTGATGTCTCGGCATTGTATGTA 59.901 41.667 0.00 0.00 0.00 2.29
2731 2888 3.118629 ACTGATGTCTCGGCATTGTATGT 60.119 43.478 0.00 0.00 0.00 2.29
2739 2896 1.795768 GACAAACTGATGTCTCGGCA 58.204 50.000 9.85 0.00 44.98 5.69
2769 2927 2.835580 TGGTTCCGGTTCGTTGATTA 57.164 45.000 0.00 0.00 0.00 1.75
2797 3183 3.307762 GGTCTGAATGCCTACAAACCTCT 60.308 47.826 0.00 0.00 0.00 3.69
2806 3192 2.499205 CGCGGGTCTGAATGCCTA 59.501 61.111 0.00 0.00 0.00 3.93
2811 3197 4.473520 CAGGGCGCGGGTCTGAAT 62.474 66.667 8.83 0.00 0.00 2.57
2821 3207 3.697439 TTGGAGGCATACAGGGCGC 62.697 63.158 0.00 0.00 38.57 6.53
2823 3209 1.204704 GTTTTTGGAGGCATACAGGGC 59.795 52.381 0.00 0.00 0.00 5.19
2827 3213 1.883275 CCACGTTTTTGGAGGCATACA 59.117 47.619 0.00 0.00 39.24 2.29
2831 3217 3.124686 GCCACGTTTTTGGAGGCA 58.875 55.556 5.98 0.00 44.59 4.75
2838 3224 4.640789 TTTGTATGTGAGCCACGTTTTT 57.359 36.364 5.53 0.00 37.14 1.94
2848 3234 5.446709 CAGAGCAAGTGTTTTGTATGTGAG 58.553 41.667 0.00 0.00 0.00 3.51
2849 3235 4.275689 CCAGAGCAAGTGTTTTGTATGTGA 59.724 41.667 0.00 0.00 0.00 3.58
2862 3249 2.659610 GCGGAGACCAGAGCAAGT 59.340 61.111 0.00 0.00 0.00 3.16
2870 3257 0.248012 TGAATTTAGCGCGGAGACCA 59.752 50.000 8.83 0.00 0.00 4.02
2871 3258 0.651031 GTGAATTTAGCGCGGAGACC 59.349 55.000 8.83 0.00 0.00 3.85
2879 3266 3.529634 TTGACCAACGTGAATTTAGCG 57.470 42.857 0.00 0.00 0.00 4.26
2881 3268 4.854399 TGCTTTGACCAACGTGAATTTAG 58.146 39.130 0.00 0.00 0.00 1.85
2882 3269 4.902443 TGCTTTGACCAACGTGAATTTA 57.098 36.364 0.00 0.00 0.00 1.40
2883 3270 3.791973 TGCTTTGACCAACGTGAATTT 57.208 38.095 0.00 0.00 0.00 1.82
2884 3271 3.791973 TTGCTTTGACCAACGTGAATT 57.208 38.095 0.00 0.00 0.00 2.17
2890 3277 1.187715 CACGTTTGCTTTGACCAACG 58.812 50.000 1.94 1.94 0.00 4.10
2892 3279 1.133407 GACCACGTTTGCTTTGACCAA 59.867 47.619 0.00 0.00 0.00 3.67
2893 3280 0.736053 GACCACGTTTGCTTTGACCA 59.264 50.000 0.00 0.00 0.00 4.02
2899 3286 0.034896 AGGATCGACCACGTTTGCTT 59.965 50.000 6.78 0.00 42.04 3.91
2903 3290 3.846360 CTCTTTAGGATCGACCACGTTT 58.154 45.455 6.78 0.00 42.04 3.60
2904 3291 3.505464 CTCTTTAGGATCGACCACGTT 57.495 47.619 6.78 0.00 42.04 3.99
2918 3305 5.071788 AGGGAAACATCATATCGCCTCTTTA 59.928 40.000 0.00 0.00 0.00 1.85
2921 3308 2.975489 AGGGAAACATCATATCGCCTCT 59.025 45.455 0.00 0.00 0.00 3.69
2925 3312 2.412089 GCGTAGGGAAACATCATATCGC 59.588 50.000 0.00 0.00 0.00 4.58
2929 3316 1.137282 TGCGCGTAGGGAAACATCATA 59.863 47.619 8.43 0.00 46.37 2.15
2930 3317 0.107897 TGCGCGTAGGGAAACATCAT 60.108 50.000 8.43 0.00 46.37 2.45
2945 3333 0.875908 TCGGCTCTGTATCAATGCGC 60.876 55.000 0.00 0.00 0.00 6.09
2946 3334 0.855349 GTCGGCTCTGTATCAATGCG 59.145 55.000 0.00 0.00 0.00 4.73
2972 3360 1.933307 AAATAGTTGGGGGCCGAGGG 61.933 60.000 0.00 0.00 0.00 4.30
2975 3363 1.917568 ACTTAAATAGTTGGGGGCCGA 59.082 47.619 0.00 0.00 31.29 5.54
2979 3367 4.236527 AGCTGACTTAAATAGTTGGGGG 57.763 45.455 0.00 0.00 37.17 5.40
2984 3372 4.120589 GCGGCTAGCTGACTTAAATAGTT 58.879 43.478 27.93 0.00 44.04 2.24
2985 3373 3.718815 GCGGCTAGCTGACTTAAATAGT 58.281 45.455 27.93 0.00 44.04 2.12
3010 3398 1.977594 GCGATGGTGTAGGGTTTGCG 61.978 60.000 0.00 0.00 0.00 4.85
3015 3403 0.035439 CAAAGGCGATGGTGTAGGGT 60.035 55.000 0.00 0.00 0.00 4.34
3032 3420 6.494666 TTTTAGGACAGGAGAAGAGAACAA 57.505 37.500 0.00 0.00 0.00 2.83
3034 3422 6.110033 GGATTTTAGGACAGGAGAAGAGAAC 58.890 44.000 0.00 0.00 0.00 3.01
3039 3427 5.428184 AGTGGATTTTAGGACAGGAGAAG 57.572 43.478 0.00 0.00 0.00 2.85
3046 3434 3.055385 CCCTCGAAGTGGATTTTAGGACA 60.055 47.826 0.00 0.00 45.27 4.02
3047 3435 3.532542 CCCTCGAAGTGGATTTTAGGAC 58.467 50.000 0.00 0.00 45.27 3.85
3051 3439 1.631388 TGCCCCTCGAAGTGGATTTTA 59.369 47.619 0.00 0.00 45.27 1.52
3058 3446 2.747855 GCCTTGCCCCTCGAAGTG 60.748 66.667 0.00 0.00 0.00 3.16
3059 3447 3.249189 TGCCTTGCCCCTCGAAGT 61.249 61.111 0.00 0.00 0.00 3.01
3097 3486 3.691342 CGAAGCCCGTGGAGGTGA 61.691 66.667 0.00 0.00 38.74 4.02
3129 3518 0.110104 CATGAGATGAAGCCCTCCCC 59.890 60.000 0.00 0.00 0.00 4.81
3131 3520 0.536915 GCCATGAGATGAAGCCCTCC 60.537 60.000 0.00 0.00 0.00 4.30
3132 3521 0.182061 TGCCATGAGATGAAGCCCTC 59.818 55.000 0.00 0.00 0.00 4.30
3133 3522 0.106819 GTGCCATGAGATGAAGCCCT 60.107 55.000 0.00 0.00 0.00 5.19
3134 3523 0.106819 AGTGCCATGAGATGAAGCCC 60.107 55.000 0.00 0.00 0.00 5.19
3135 3524 1.022735 CAGTGCCATGAGATGAAGCC 58.977 55.000 0.00 0.00 0.00 4.35
3137 3526 1.931841 CGACAGTGCCATGAGATGAAG 59.068 52.381 0.00 0.00 0.00 3.02
3138 3527 1.550072 TCGACAGTGCCATGAGATGAA 59.450 47.619 0.00 0.00 0.00 2.57
3139 3528 1.134995 GTCGACAGTGCCATGAGATGA 60.135 52.381 11.55 0.00 0.00 2.92
3140 3529 1.284657 GTCGACAGTGCCATGAGATG 58.715 55.000 11.55 0.00 0.00 2.90
3142 3531 1.591703 GGTCGACAGTGCCATGAGA 59.408 57.895 18.91 0.00 0.00 3.27
3145 3534 3.490759 GCGGTCGACAGTGCCATG 61.491 66.667 18.91 0.00 0.00 3.66
3149 3538 4.059459 CAACGCGGTCGACAGTGC 62.059 66.667 25.78 19.88 39.41 4.40
3150 3539 2.645510 GACAACGCGGTCGACAGTG 61.646 63.158 24.56 24.56 39.41 3.66
3151 3540 2.354305 GACAACGCGGTCGACAGT 60.354 61.111 18.91 11.15 39.41 3.55
3152 3541 3.103911 GGACAACGCGGTCGACAG 61.104 66.667 18.91 15.23 38.70 3.51
3154 3543 3.103911 CTGGACAACGCGGTCGAC 61.104 66.667 12.47 7.13 38.70 4.20
3155 3544 4.351938 CCTGGACAACGCGGTCGA 62.352 66.667 12.47 5.50 38.70 4.20
3165 3624 2.031870 CGATGTAGATGGTCCTGGACA 58.968 52.381 26.94 14.17 33.68 4.02
3167 3626 2.748209 TCGATGTAGATGGTCCTGGA 57.252 50.000 0.00 0.00 0.00 3.86
3169 3628 3.062763 GCAATCGATGTAGATGGTCCTG 58.937 50.000 0.00 0.00 0.00 3.86
3170 3629 2.968574 AGCAATCGATGTAGATGGTCCT 59.031 45.455 0.00 0.00 0.00 3.85
3171 3630 3.321497 GAGCAATCGATGTAGATGGTCC 58.679 50.000 12.93 0.00 0.00 4.46
3172 3631 3.321497 GGAGCAATCGATGTAGATGGTC 58.679 50.000 14.81 14.81 0.00 4.02
3173 3632 2.037772 GGGAGCAATCGATGTAGATGGT 59.962 50.000 0.00 0.00 0.00 3.55
3177 3636 2.666317 TGAGGGAGCAATCGATGTAGA 58.334 47.619 0.00 0.00 0.00 2.59
3179 3638 3.511540 CCTATGAGGGAGCAATCGATGTA 59.488 47.826 0.00 0.00 0.00 2.29
3181 3640 2.301296 ACCTATGAGGGAGCAATCGATG 59.699 50.000 0.00 0.00 40.58 3.84
3182 3641 2.301296 CACCTATGAGGGAGCAATCGAT 59.699 50.000 0.00 0.00 40.58 3.59
3183 3642 1.688735 CACCTATGAGGGAGCAATCGA 59.311 52.381 0.00 0.00 40.58 3.59
3184 3643 1.688735 TCACCTATGAGGGAGCAATCG 59.311 52.381 0.00 0.00 40.58 3.34
3185 3644 3.135530 ACTTCACCTATGAGGGAGCAATC 59.864 47.826 0.00 0.00 40.58 2.67
3186 3645 3.118531 ACTTCACCTATGAGGGAGCAAT 58.881 45.455 0.00 0.00 40.58 3.56
3187 3646 2.501723 GACTTCACCTATGAGGGAGCAA 59.498 50.000 0.00 0.00 40.58 3.91
3189 3648 1.067821 CGACTTCACCTATGAGGGAGC 59.932 57.143 0.00 0.00 40.58 4.70
3190 3649 2.656002 TCGACTTCACCTATGAGGGAG 58.344 52.381 0.00 0.00 40.58 4.30
3191 3650 2.758979 GTTCGACTTCACCTATGAGGGA 59.241 50.000 0.00 0.00 40.58 4.20
3193 3652 2.761208 AGGTTCGACTTCACCTATGAGG 59.239 50.000 4.67 0.00 41.97 3.86
3199 3658 4.805744 AGGATATAGGTTCGACTTCACCT 58.194 43.478 11.17 11.17 45.85 4.00
3201 3660 4.320348 CCGAGGATATAGGTTCGACTTCAC 60.320 50.000 0.00 0.00 35.19 3.18
3202 3661 3.819337 CCGAGGATATAGGTTCGACTTCA 59.181 47.826 0.00 0.00 35.19 3.02
3203 3662 4.070716 TCCGAGGATATAGGTTCGACTTC 58.929 47.826 0.00 0.00 35.19 3.01
3204 3663 3.819902 GTCCGAGGATATAGGTTCGACTT 59.180 47.826 0.00 0.00 35.19 3.01
3205 3664 3.072768 AGTCCGAGGATATAGGTTCGACT 59.927 47.826 0.00 0.00 35.19 4.18
3206 3665 3.410508 AGTCCGAGGATATAGGTTCGAC 58.589 50.000 0.00 0.00 35.19 4.20
3207 3666 3.784511 AGTCCGAGGATATAGGTTCGA 57.215 47.619 0.00 0.00 35.19 3.71
3209 3668 6.070309 TCCTAGTAGTCCGAGGATATAGGTTC 60.070 46.154 15.30 0.00 34.36 3.62
3210 3669 5.789575 TCCTAGTAGTCCGAGGATATAGGTT 59.210 44.000 15.30 0.00 34.36 3.50
3214 3673 4.781621 TGCTCCTAGTAGTCCGAGGATATA 59.218 45.833 0.00 0.00 38.69 0.86
3215 3674 3.587951 TGCTCCTAGTAGTCCGAGGATAT 59.412 47.826 0.00 0.00 38.69 1.63
3216 3675 2.977580 TGCTCCTAGTAGTCCGAGGATA 59.022 50.000 0.00 0.00 38.69 2.59
3217 3676 1.775459 TGCTCCTAGTAGTCCGAGGAT 59.225 52.381 0.00 0.00 38.69 3.24
3218 3677 1.141254 CTGCTCCTAGTAGTCCGAGGA 59.859 57.143 0.00 0.00 37.02 3.71
3219 3678 1.600023 CTGCTCCTAGTAGTCCGAGG 58.400 60.000 0.00 0.00 0.00 4.63
3220 3679 1.141254 TCCTGCTCCTAGTAGTCCGAG 59.859 57.143 0.00 0.00 0.00 4.63
3221 3680 1.210538 TCCTGCTCCTAGTAGTCCGA 58.789 55.000 0.00 0.00 0.00 4.55
3222 3681 2.156098 GATCCTGCTCCTAGTAGTCCG 58.844 57.143 0.00 0.00 0.00 4.79
3224 3683 3.319689 GGTTGATCCTGCTCCTAGTAGTC 59.680 52.174 0.00 0.00 0.00 2.59
3226 3685 2.294791 CGGTTGATCCTGCTCCTAGTAG 59.705 54.545 0.00 0.00 0.00 2.57
3227 3686 2.307768 CGGTTGATCCTGCTCCTAGTA 58.692 52.381 0.00 0.00 0.00 1.82
3228 3687 1.115467 CGGTTGATCCTGCTCCTAGT 58.885 55.000 0.00 0.00 0.00 2.57
3229 3688 0.249657 GCGGTTGATCCTGCTCCTAG 60.250 60.000 0.00 0.00 34.60 3.02
3230 3689 1.686325 GGCGGTTGATCCTGCTCCTA 61.686 60.000 3.24 0.00 36.50 2.94
3231 3690 2.586792 GCGGTTGATCCTGCTCCT 59.413 61.111 0.00 0.00 34.60 3.69
3232 3691 2.514824 GGCGGTTGATCCTGCTCC 60.515 66.667 3.24 0.00 36.50 4.70
3233 3692 2.514824 GGGCGGTTGATCCTGCTC 60.515 66.667 3.24 0.00 36.50 4.26
3234 3693 2.615227 GATGGGCGGTTGATCCTGCT 62.615 60.000 3.24 0.00 36.50 4.24
3235 3694 2.124151 ATGGGCGGTTGATCCTGC 60.124 61.111 0.00 0.00 35.89 4.85
3236 3695 1.526917 GGATGGGCGGTTGATCCTG 60.527 63.158 0.00 0.00 34.00 3.86
3237 3696 1.694169 AGGATGGGCGGTTGATCCT 60.694 57.895 0.00 0.00 41.06 3.24
3238 3697 1.227973 GAGGATGGGCGGTTGATCC 60.228 63.158 0.00 0.00 36.63 3.36
3239 3698 0.815615 GTGAGGATGGGCGGTTGATC 60.816 60.000 0.00 0.00 0.00 2.92
3240 3699 1.224592 GTGAGGATGGGCGGTTGAT 59.775 57.895 0.00 0.00 0.00 2.57
3241 3700 2.668632 GTGAGGATGGGCGGTTGA 59.331 61.111 0.00 0.00 0.00 3.18
3242 3701 2.819595 CGTGAGGATGGGCGGTTG 60.820 66.667 0.00 0.00 0.00 3.77
3263 3722 4.430423 CTTGTTCGTCGCGGCAGC 62.430 66.667 12.89 0.00 40.74 5.25
3264 3723 4.430423 GCTTGTTCGTCGCGGCAG 62.430 66.667 12.89 3.50 0.00 4.85
3266 3725 2.780149 AATTGCTTGTTCGTCGCGGC 62.780 55.000 6.13 1.93 0.00 6.53
3267 3726 0.385473 AAATTGCTTGTTCGTCGCGG 60.385 50.000 6.13 0.00 0.00 6.46
3268 3727 0.697010 CAAATTGCTTGTTCGTCGCG 59.303 50.000 0.00 0.00 0.00 5.87
3269 3728 0.430858 GCAAATTGCTTGTTCGTCGC 59.569 50.000 11.19 0.00 40.96 5.19
3270 3729 0.697010 CGCAAATTGCTTGTTCGTCG 59.303 50.000 16.42 0.00 42.25 5.12
3271 3730 1.447938 CACGCAAATTGCTTGTTCGTC 59.552 47.619 16.42 0.00 42.25 4.20
3272 3731 1.476074 CACGCAAATTGCTTGTTCGT 58.524 45.000 16.42 2.27 42.25 3.85
3273 3732 0.777631 CCACGCAAATTGCTTGTTCG 59.222 50.000 20.38 5.38 40.51 3.95
3274 3733 0.508213 GCCACGCAAATTGCTTGTTC 59.492 50.000 20.38 10.02 40.51 3.18
3275 3734 0.179089 TGCCACGCAAATTGCTTGTT 60.179 45.000 20.38 0.00 40.51 2.83
3276 3735 0.598158 CTGCCACGCAAATTGCTTGT 60.598 50.000 20.38 8.03 40.51 3.16
3277 3736 0.318869 TCTGCCACGCAAATTGCTTG 60.319 50.000 16.22 16.22 42.25 4.01
3278 3737 0.318955 GTCTGCCACGCAAATTGCTT 60.319 50.000 16.42 3.39 42.25 3.91
3279 3738 1.286880 GTCTGCCACGCAAATTGCT 59.713 52.632 16.42 0.26 42.25 3.91
3280 3739 2.082366 CGTCTGCCACGCAAATTGC 61.082 57.895 8.09 8.09 42.87 3.56
3281 3740 4.135570 CGTCTGCCACGCAAATTG 57.864 55.556 0.00 0.00 42.87 2.32
3289 3748 1.078848 AAGCTCCATCGTCTGCCAC 60.079 57.895 0.00 0.00 0.00 5.01
3290 3749 1.219124 GAAGCTCCATCGTCTGCCA 59.781 57.895 0.00 0.00 0.00 4.92
3291 3750 0.809241 CAGAAGCTCCATCGTCTGCC 60.809 60.000 0.00 0.00 36.20 4.85
3292 3751 0.108424 ACAGAAGCTCCATCGTCTGC 60.108 55.000 10.14 0.00 43.30 4.26
3293 3752 1.998315 CAACAGAAGCTCCATCGTCTG 59.002 52.381 8.90 8.90 44.46 3.51
3294 3753 2.376808 CAACAGAAGCTCCATCGTCT 57.623 50.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.