Multiple sequence alignment - TraesCS3A01G117400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G117400 chr3A 100.000 7535 0 0 1 7535 87360042 87367576 0.000000e+00 13915.0
1 TraesCS3A01G117400 chr3A 84.414 648 75 13 2776 3403 83718595 83717954 1.390000e-171 614.0
2 TraesCS3A01G117400 chr3A 93.117 247 14 1 6126 6372 87366107 87366350 7.190000e-95 359.0
3 TraesCS3A01G117400 chr3A 93.117 247 14 1 6066 6309 87366167 87366413 7.190000e-95 359.0
4 TraesCS3A01G117400 chr3A 82.667 375 33 10 4137 4486 83717509 83717142 3.420000e-78 303.0
5 TraesCS3A01G117400 chr3A 94.118 187 8 2 6186 6372 87366107 87366290 1.600000e-71 281.0
6 TraesCS3A01G117400 chr3A 94.118 187 8 2 6066 6249 87366227 87366413 1.600000e-71 281.0
7 TraesCS3A01G117400 chr3A 92.126 127 7 1 6246 6372 87366107 87366230 7.770000e-40 176.0
8 TraesCS3A01G117400 chr3A 92.126 127 7 1 6066 6189 87366287 87366413 7.770000e-40 176.0
9 TraesCS3A01G117400 chr3D 96.948 2523 55 11 4223 6732 74343502 74346015 0.000000e+00 4213.0
10 TraesCS3A01G117400 chr3D 95.118 1270 54 6 774 2038 74340447 74341713 0.000000e+00 1995.0
11 TraesCS3A01G117400 chr3D 96.070 967 28 6 2592 3557 74342344 74343301 0.000000e+00 1567.0
12 TraesCS3A01G117400 chr3D 93.289 596 18 10 2044 2627 74341759 74342344 0.000000e+00 859.0
13 TraesCS3A01G117400 chr3D 90.714 420 36 3 270 689 74339864 74340280 2.380000e-154 556.0
14 TraesCS3A01G117400 chr3D 82.580 597 51 24 6784 7332 74346830 74347421 1.900000e-130 477.0
15 TraesCS3A01G117400 chr3D 94.672 244 13 0 6066 6309 74345412 74345655 5.520000e-101 379.0
16 TraesCS3A01G117400 chr3D 93.117 247 14 2 6126 6372 74345352 74345595 7.190000e-95 359.0
17 TraesCS3A01G117400 chr3D 95.722 187 5 1 6186 6372 74345352 74345535 1.590000e-76 298.0
18 TraesCS3A01G117400 chr3D 96.667 180 3 3 3548 3727 74343327 74343503 5.720000e-76 296.0
19 TraesCS3A01G117400 chr3D 94.565 184 10 0 6066 6249 74345472 74345655 1.240000e-72 285.0
20 TraesCS3A01G117400 chr3D 93.548 124 8 0 6066 6189 74345532 74345655 1.290000e-42 185.0
21 TraesCS3A01G117400 chr3D 92.126 127 7 1 6246 6372 74345352 74345475 7.770000e-40 176.0
22 TraesCS3A01G117400 chr3D 91.765 85 6 1 3831 3915 133538560 133538643 4.780000e-22 117.0
23 TraesCS3A01G117400 chr3D 89.535 86 9 0 3830 3915 389633129 389633214 7.990000e-20 110.0
24 TraesCS3A01G117400 chr3D 92.188 64 5 0 6066 6129 74345592 74345655 2.900000e-14 91.6
25 TraesCS3A01G117400 chr3D 91.045 67 3 2 6306 6372 74345352 74345415 3.750000e-13 87.9
26 TraesCS3A01G117400 chr3B 94.773 2602 73 22 3548 6118 119390125 119392694 0.000000e+00 3993.0
27 TraesCS3A01G117400 chr3B 95.375 1492 46 6 2075 3551 119388602 119390085 0.000000e+00 2351.0
28 TraesCS3A01G117400 chr3B 95.332 1371 57 6 648 2013 119386901 119388269 0.000000e+00 2170.0
29 TraesCS3A01G117400 chr3B 85.274 584 57 12 1 583 119384522 119385077 6.560000e-160 575.0
30 TraesCS3A01G117400 chr3B 85.393 89 11 2 3831 3918 482487885 482487798 2.900000e-14 91.6
31 TraesCS3A01G117400 chr1D 90.392 1478 58 30 3202 4620 296528035 296529487 0.000000e+00 1866.0
32 TraesCS3A01G117400 chr1D 89.425 870 34 16 4614 5457 296530070 296530907 0.000000e+00 1044.0
33 TraesCS3A01G117400 chr2A 97.887 852 16 2 1187 2037 46722354 46723204 0.000000e+00 1472.0
34 TraesCS3A01G117400 chr2A 89.157 83 7 2 3830 3912 632593126 632593206 1.340000e-17 102.0
35 TraesCS3A01G117400 chr2A 83.486 109 16 2 717 823 636489186 636489078 4.810000e-17 100.0
36 TraesCS3A01G117400 chr1A 92.941 85 6 0 3831 3915 568391202 568391286 2.850000e-24 124.0
37 TraesCS3A01G117400 chr2D 89.583 96 8 2 3822 3915 61023698 61023793 3.690000e-23 121.0
38 TraesCS3A01G117400 chr7A 90.588 85 8 0 3831 3915 190472980 190473064 6.180000e-21 113.0
39 TraesCS3A01G117400 chr6A 87.912 91 11 0 3825 3915 604890756 604890666 2.870000e-19 108.0
40 TraesCS3A01G117400 chr2B 88.636 88 7 3 3828 3915 692467660 692467744 3.720000e-18 104.0
41 TraesCS3A01G117400 chr2B 83.486 109 16 2 717 823 134754298 134754190 4.810000e-17 100.0
42 TraesCS3A01G117400 chr2B 84.706 85 12 1 7393 7477 563685044 563685127 4.850000e-12 84.2
43 TraesCS3A01G117400 chr6B 82.569 109 17 2 717 823 26808116 26808008 2.240000e-15 95.3
44 TraesCS3A01G117400 chr6B 82.569 109 17 2 717 823 624072088 624072196 2.240000e-15 95.3
45 TraesCS3A01G117400 chr4B 82.569 109 17 2 717 823 124461944 124462052 2.240000e-15 95.3
46 TraesCS3A01G117400 chr1B 82.569 109 17 2 717 823 408087987 408087879 2.240000e-15 95.3
47 TraesCS3A01G117400 chr1B 82.569 109 17 2 717 823 487804048 487803940 2.240000e-15 95.3
48 TraesCS3A01G117400 chr1B 82.569 109 17 2 717 823 568325051 568324943 2.240000e-15 95.3
49 TraesCS3A01G117400 chr7B 79.412 136 22 4 7353 7485 130117939 130117807 2.900000e-14 91.6
50 TraesCS3A01G117400 chr5A 92.857 42 3 0 3450 3491 585405487 585405446 2.270000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G117400 chr3A 87360042 87367576 7534 False 2221.00 13915 94.103143 1 7535 7 chr3A.!!$F1 7534
1 TraesCS3A01G117400 chr3A 83717142 83718595 1453 True 458.50 614 83.540500 2776 4486 2 chr3A.!!$R1 1710
2 TraesCS3A01G117400 chr3D 74339864 74347421 7557 False 788.30 4213 93.224600 270 7332 15 chr3D.!!$F3 7062
3 TraesCS3A01G117400 chr3B 119384522 119392694 8172 False 2272.25 3993 92.688500 1 6118 4 chr3B.!!$F1 6117
4 TraesCS3A01G117400 chr1D 296528035 296530907 2872 False 1455.00 1866 89.908500 3202 5457 2 chr1D.!!$F1 2255
5 TraesCS3A01G117400 chr2A 46722354 46723204 850 False 1472.00 1472 97.887000 1187 2037 1 chr2A.!!$F1 850

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 274 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.0 0.00 3.82 F
906 2798 0.890683 CCATGCCTTTGTCAGGGTTC 59.109 55.000 0.00 0.0 44.16 3.62 F
1603 3496 2.092968 TGGAGTGCCTAGTATGCTTTGG 60.093 50.000 0.00 0.0 34.31 3.28 F
2172 4340 1.086696 GCCTACGCATCTGCAGAAAA 58.913 50.000 22.50 0.0 42.21 2.29 F
3743 6354 0.106519 CCTAATGGGTTGGCTCTGGG 60.107 60.000 0.00 0.0 0.00 4.45 F
3747 6358 0.846693 ATGGGTTGGCTCTGGGATAC 59.153 55.000 0.00 0.0 0.00 2.24 F
3978 6589 1.291877 GCGCCATGTCGACTCAACTT 61.292 55.000 17.92 0.0 0.00 2.66 F
4954 8225 2.226437 GCAGAAGAATGAGCGTTTGGAA 59.774 45.455 0.00 0.0 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1377 3270 2.654912 CGAGGTCGTCGTTGTTGGC 61.655 63.158 6.77 0.00 44.20 4.52 R
2066 4003 3.504906 CACATGTCCTGTTGAGAAATGCT 59.495 43.478 0.00 0.00 35.29 3.79 R
3477 6039 0.692756 TCCCGCCCAGATCCAATGTA 60.693 55.000 0.00 0.00 0.00 2.29 R
4131 6764 0.321919 TTGCCTGACAGCTGACCATC 60.322 55.000 23.35 8.02 0.00 3.51 R
5159 8435 1.537814 CCAAGCTGCAGGCCATGAAA 61.538 55.000 17.12 0.00 43.05 2.69 R
5195 8471 2.238521 GAGGGATGCCAAAAGAACACA 58.761 47.619 5.86 0.00 0.00 3.72 R
5617 8923 2.866726 TTTTTGCCGCCTCCTTGCC 61.867 57.895 0.00 0.00 0.00 4.52 R
6871 10944 0.108186 CTATGTGCGCTCCACTCCAA 60.108 55.000 9.73 0.00 44.92 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 5.700722 TGAATCTTCTTCATATGCATGCC 57.299 39.130 16.68 0.00 31.73 4.40
66 67 2.091720 TCTTCATATGCATGCCACCCTT 60.092 45.455 16.68 0.00 31.73 3.95
84 85 4.202673 ACCCTTTGGTGTAGACAATTCCAT 60.203 41.667 0.00 0.00 45.58 3.41
88 89 6.153340 CCTTTGGTGTAGACAATTCCATGAAT 59.847 38.462 0.00 0.00 33.25 2.57
89 90 6.757897 TTGGTGTAGACAATTCCATGAATC 57.242 37.500 0.00 0.00 30.29 2.52
102 104 6.764308 TTCCATGAATCTGACTTCAAATCC 57.236 37.500 0.00 0.00 38.55 3.01
128 130 9.741168 CATACTATCAACTTGTAAAAGACAACG 57.259 33.333 0.00 0.00 43.30 4.10
142 144 6.730960 AAAGACAACGTACTTCTTGTTGAA 57.269 33.333 14.88 0.00 44.34 2.69
159 161 5.070001 TGTTGAACAAGGGGAGTCAATTAG 58.930 41.667 0.00 0.00 0.00 1.73
169 171 3.756963 GGGAGTCAATTAGGTCCAAACAC 59.243 47.826 0.00 0.00 0.00 3.32
170 172 3.435671 GGAGTCAATTAGGTCCAAACACG 59.564 47.826 0.00 0.00 0.00 4.49
175 177 3.992943 ATTAGGTCCAAACACGATGGA 57.007 42.857 0.00 0.00 44.58 3.41
202 204 3.137446 GGCATGATCTATGACTTGCCT 57.863 47.619 13.95 0.00 46.58 4.75
218 220 4.158394 ACTTGCCTTATTGCCAACACATAG 59.842 41.667 0.00 0.00 0.00 2.23
270 272 5.861222 ATATATGTGTGTGTGTGTGTGTG 57.139 39.130 0.00 0.00 0.00 3.82
271 273 1.819928 ATGTGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 0.00 3.72
272 274 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
277 279 3.254411 TGTGTGTGTGTGTGTGTGAAAAT 59.746 39.130 0.00 0.00 0.00 1.82
282 284 5.737290 GTGTGTGTGTGTGTGAAAATAAGAC 59.263 40.000 0.00 0.00 0.00 3.01
313 315 3.306364 CGGTGAAGAGAAGATGAACACCT 60.306 47.826 0.00 0.00 42.47 4.00
338 340 1.003355 CACGAGTGCACCCCTTCAT 60.003 57.895 14.63 0.00 0.00 2.57
390 392 2.619177 TCTTAGGAGAGCGGAAAGATCG 59.381 50.000 0.00 0.00 40.85 3.69
398 400 1.696832 GCGGAAAGATCGCCAGTCAC 61.697 60.000 0.00 0.00 46.55 3.67
402 404 2.552315 GGAAAGATCGCCAGTCACAAAA 59.448 45.455 0.00 0.00 0.00 2.44
403 405 3.365364 GGAAAGATCGCCAGTCACAAAAG 60.365 47.826 0.00 0.00 0.00 2.27
404 406 2.839486 AGATCGCCAGTCACAAAAGA 57.161 45.000 0.00 0.00 0.00 2.52
406 408 1.734465 GATCGCCAGTCACAAAAGAGG 59.266 52.381 0.00 0.00 0.00 3.69
408 410 1.140052 TCGCCAGTCACAAAAGAGGAA 59.860 47.619 0.00 0.00 0.00 3.36
409 411 2.154462 CGCCAGTCACAAAAGAGGAAT 58.846 47.619 0.00 0.00 0.00 3.01
411 413 3.751175 CGCCAGTCACAAAAGAGGAATAA 59.249 43.478 0.00 0.00 0.00 1.40
412 414 4.215399 CGCCAGTCACAAAAGAGGAATAAA 59.785 41.667 0.00 0.00 0.00 1.40
457 459 1.271325 TGTAACCTACGTGACCGAGGA 60.271 52.381 8.31 0.00 35.93 3.71
468 470 1.067142 TGACCGAGGAAACGAATCCAG 60.067 52.381 12.54 6.82 42.27 3.86
524 526 8.631480 ATCATTATGATAGAAAAGCATGCTCA 57.369 30.769 22.93 13.39 34.88 4.26
532 534 4.582869 AGAAAAGCATGCTCAGTGATACA 58.417 39.130 22.93 0.00 0.00 2.29
556 558 6.535274 AGATTGCTTTTCAGAAATGTTTGC 57.465 33.333 9.82 5.08 26.66 3.68
560 562 3.798548 GCTTTTCAGAAATGTTTGCGGGA 60.799 43.478 9.82 0.00 0.00 5.14
567 569 2.888834 AATGTTTGCGGGAATATGCC 57.111 45.000 0.00 0.00 0.00 4.40
589 2350 5.178797 CCCGTGTGAGATCTAAGTTTGAAT 58.821 41.667 0.00 0.00 0.00 2.57
606 2367 8.641498 AGTTTGAATATCAAGTTGTGAGGAAT 57.359 30.769 2.11 0.00 40.43 3.01
705 2466 3.897657 ATGGACGGAGGGAGTATTAGA 57.102 47.619 0.00 0.00 0.00 2.10
708 2469 2.584236 GACGGAGGGAGTATTAGAGCA 58.416 52.381 0.00 0.00 0.00 4.26
709 2470 2.293955 GACGGAGGGAGTATTAGAGCAC 59.706 54.545 0.00 0.00 0.00 4.40
719 2609 6.211584 GGGAGTATTAGAGCACTCATGGATTA 59.788 42.308 0.00 0.00 42.45 1.75
899 2791 8.299570 CCATACTAATAAATCCATGCCTTTGTC 58.700 37.037 0.00 0.00 0.00 3.18
906 2798 0.890683 CCATGCCTTTGTCAGGGTTC 59.109 55.000 0.00 0.00 44.16 3.62
1377 3270 3.528878 ATCGAGACGGCGCTCATCG 62.529 63.158 23.75 19.48 42.12 3.84
1603 3496 2.092968 TGGAGTGCCTAGTATGCTTTGG 60.093 50.000 0.00 0.00 34.31 3.28
1637 3530 5.658468 TGCAATCTGATTCACACACAAAAA 58.342 33.333 0.00 0.00 0.00 1.94
2038 3935 8.503458 TGTCTATAGTAACTGTGTCTTAGTCC 57.497 38.462 0.00 0.00 0.00 3.85
2039 3936 7.555554 TGTCTATAGTAACTGTGTCTTAGTCCC 59.444 40.741 0.00 0.00 0.00 4.46
2040 3937 7.013178 GTCTATAGTAACTGTGTCTTAGTCCCC 59.987 44.444 0.00 0.00 0.00 4.81
2066 4003 1.751351 CCCGATCTTCTAGTGCAGTCA 59.249 52.381 0.00 0.00 0.00 3.41
2172 4340 1.086696 GCCTACGCATCTGCAGAAAA 58.913 50.000 22.50 0.00 42.21 2.29
2173 4341 1.468520 GCCTACGCATCTGCAGAAAAA 59.531 47.619 22.50 0.00 42.21 1.94
2270 4440 1.996898 TGTCGTACGATGCCATGTTTC 59.003 47.619 22.57 4.74 0.00 2.78
2273 4443 2.165641 TCGTACGATGCCATGTTTCTCT 59.834 45.455 15.28 0.00 0.00 3.10
2391 4561 4.026356 AGCAACTGCCAAGAAACTATCT 57.974 40.909 0.00 0.00 43.38 1.98
2444 4614 7.660030 ACATATTGCTTGGCCTTTTTACTAT 57.340 32.000 3.32 0.00 0.00 2.12
2505 4675 1.125093 TTTCAGGTCGCTGAAGGGGA 61.125 55.000 5.76 0.00 43.21 4.81
2549 4719 5.181811 CGTGGGTATGCATCATCATATTGTT 59.818 40.000 0.19 0.00 32.24 2.83
2674 4890 1.202330 AAGGAGCAGGATCCAGTGAG 58.798 55.000 15.82 0.00 42.26 3.51
2747 4963 7.362662 TGCTTTTGTGAGACATGTTCTTAATC 58.637 34.615 0.00 0.00 33.22 1.75
3301 5534 7.394016 TGGCTTGACTCAAGATTATTAAGTCA 58.606 34.615 20.98 0.00 43.42 3.41
3305 5538 9.307121 CTTGACTCAAGATTATTAAGTCATCGT 57.693 33.333 12.82 0.00 44.08 3.73
3322 5558 1.402259 TCGTGTTGTCGCCATTTTGTT 59.598 42.857 0.00 0.00 0.00 2.83
3352 5588 3.680786 CGTGGACGACTGGGAGCA 61.681 66.667 0.00 0.00 43.02 4.26
3477 6039 2.307496 TGGCACAAGAATGGGTGAAT 57.693 45.000 0.00 0.00 37.18 2.57
3602 6207 3.993865 TAGGGGCGGCATGACAGGA 62.994 63.158 12.47 0.00 0.00 3.86
3629 6234 1.220477 GGAAGAGACTGAGCTGGGC 59.780 63.158 0.00 0.00 0.00 5.36
3743 6354 0.106519 CCTAATGGGTTGGCTCTGGG 60.107 60.000 0.00 0.00 0.00 4.45
3747 6358 0.846693 ATGGGTTGGCTCTGGGATAC 59.153 55.000 0.00 0.00 0.00 2.24
3765 6376 5.702266 GGATACCTATTGGGCCTAACTTTT 58.298 41.667 2.51 0.00 39.10 2.27
3852 6463 7.569599 ATTACTCCCTCCGTTCCATATTAAT 57.430 36.000 0.00 0.00 0.00 1.40
3853 6464 5.906772 ACTCCCTCCGTTCCATATTAATT 57.093 39.130 0.00 0.00 0.00 1.40
3854 6465 5.621193 ACTCCCTCCGTTCCATATTAATTG 58.379 41.667 0.00 0.00 0.00 2.32
3855 6466 5.132144 ACTCCCTCCGTTCCATATTAATTGT 59.868 40.000 0.00 0.00 0.00 2.71
3856 6467 5.617252 TCCCTCCGTTCCATATTAATTGTC 58.383 41.667 0.00 0.00 0.00 3.18
3857 6468 4.451096 CCCTCCGTTCCATATTAATTGTCG 59.549 45.833 0.00 0.00 0.00 4.35
3858 6469 4.084013 CCTCCGTTCCATATTAATTGTCGC 60.084 45.833 0.00 0.00 0.00 5.19
3859 6470 4.699637 TCCGTTCCATATTAATTGTCGCT 58.300 39.130 0.00 0.00 0.00 4.93
3860 6471 4.509970 TCCGTTCCATATTAATTGTCGCTG 59.490 41.667 0.00 0.00 0.00 5.18
3861 6472 4.509970 CCGTTCCATATTAATTGTCGCTGA 59.490 41.667 0.00 0.00 0.00 4.26
3862 6473 5.179368 CCGTTCCATATTAATTGTCGCTGAT 59.821 40.000 0.00 0.00 0.00 2.90
3863 6474 6.293407 CCGTTCCATATTAATTGTCGCTGATT 60.293 38.462 0.00 0.00 0.00 2.57
3864 6475 7.132213 CGTTCCATATTAATTGTCGCTGATTT 58.868 34.615 0.00 0.00 0.00 2.17
3865 6476 8.279800 CGTTCCATATTAATTGTCGCTGATTTA 58.720 33.333 0.00 0.00 0.00 1.40
3866 6477 9.599322 GTTCCATATTAATTGTCGCTGATTTAG 57.401 33.333 0.00 0.00 0.00 1.85
3867 6478 8.902540 TCCATATTAATTGTCGCTGATTTAGT 57.097 30.769 0.00 0.00 0.00 2.24
3868 6479 9.990360 TCCATATTAATTGTCGCTGATTTAGTA 57.010 29.630 0.00 0.00 0.00 1.82
3952 6563 1.429148 GGAGCACCTAATTGTCGCCG 61.429 60.000 0.00 0.00 0.00 6.46
3978 6589 1.291877 GCGCCATGTCGACTCAACTT 61.292 55.000 17.92 0.00 0.00 2.66
4011 6643 3.872771 AGCAACATGAAAACTTTGGCTTG 59.127 39.130 0.00 0.00 0.00 4.01
4042 6674 4.580167 TGGACAGTTGAAAGACTTGGATTG 59.420 41.667 0.00 0.00 0.00 2.67
4103 6735 6.103330 GTCTTGGTTTTCCTTGTGCTTTTTA 58.897 36.000 0.00 0.00 41.38 1.52
4131 6764 9.887629 AGCATAGATATAGATGACCAAATTGAG 57.112 33.333 0.00 0.00 0.00 3.02
4275 6915 5.878406 TTGCCCTTCTTGGTTTTCAAATA 57.122 34.783 0.00 0.00 34.56 1.40
4290 6935 8.799367 GGTTTTCAAATAACCACCTACTGTATT 58.201 33.333 0.00 0.00 43.63 1.89
4392 7055 4.344679 TCCATTGCACATTCCAGAAAAGTT 59.655 37.500 0.00 0.00 0.00 2.66
4954 8225 2.226437 GCAGAAGAATGAGCGTTTGGAA 59.774 45.455 0.00 0.00 0.00 3.53
5159 8435 6.667414 TCCTTACATTGGCAATATCTTTTGGT 59.333 34.615 13.23 6.60 0.00 3.67
5195 8471 8.364142 TGCAGCTTGGTTGTTATATTAAAACTT 58.636 29.630 0.00 0.00 0.00 2.66
5261 8538 6.145048 GCATTCATCAATATGCTTTTACTGGC 59.855 38.462 0.00 0.00 42.91 4.85
5318 8615 9.431887 GGAACACTGATTCTACTGTATTTGTTA 57.568 33.333 0.00 0.00 0.00 2.41
5427 8733 2.972625 TCACCTGCTATCCTTTTGACG 58.027 47.619 0.00 0.00 0.00 4.35
5617 8923 4.157472 GGAAAGGAAAGGAAGCTGATTCAG 59.843 45.833 9.40 9.40 39.91 3.02
5757 9063 2.952978 AGACGATCTTAGTTCTGGCGAT 59.047 45.455 0.00 0.00 0.00 4.58
6035 9341 2.357034 GAGGCAAAGACCGACGCA 60.357 61.111 0.00 0.00 33.69 5.24
6162 9468 6.766467 CCAAAGATGATCATCATTCAGAGTCA 59.234 38.462 31.99 0.00 37.20 3.41
6163 9469 7.445707 CCAAAGATGATCATCATTCAGAGTCAT 59.554 37.037 31.99 8.83 37.20 3.06
6199 9505 0.462759 GGAACCTGAAGATGGCTCCG 60.463 60.000 0.00 0.00 31.19 4.63
6204 9510 1.208052 CCTGAAGATGGCTCCGAAGAA 59.792 52.381 0.00 0.00 0.00 2.52
6231 9537 2.301009 TCATTCAGAGTCAGCTGCAGAA 59.699 45.455 20.43 8.52 35.86 3.02
6234 9540 2.177734 TCAGAGTCAGCTGCAGAATCT 58.822 47.619 20.43 17.45 40.67 2.40
6271 9577 4.653868 AGATGGCTCCAAAGATGATCATC 58.346 43.478 25.42 25.42 38.09 2.92
6288 9594 2.235402 TCATCATTCAGAGTCAGCTGCA 59.765 45.455 9.47 0.00 35.86 4.41
6322 9628 2.503895 ACCTGAAGATGGCTCCAAAG 57.496 50.000 0.00 0.00 0.00 2.77
6323 9629 1.988107 ACCTGAAGATGGCTCCAAAGA 59.012 47.619 0.00 0.00 0.00 2.52
6324 9630 2.579860 ACCTGAAGATGGCTCCAAAGAT 59.420 45.455 0.00 0.00 0.00 2.40
6357 9663 1.206610 TCAGAGTCAGCTGCAGATTCC 59.793 52.381 20.43 3.36 35.86 3.01
6396 9702 6.223351 TCTGAGTCGTCTTAGAGATGAGTA 57.777 41.667 7.33 0.00 42.37 2.59
6398 9704 7.953752 TCTGAGTCGTCTTAGAGATGAGTATA 58.046 38.462 7.33 1.32 42.37 1.47
6441 9747 3.266772 TGTGCTATGGATGGAAGGAAGTT 59.733 43.478 0.00 0.00 0.00 2.66
6493 9799 2.474816 GCTTCCACTTATACCAGCTCG 58.525 52.381 0.00 0.00 0.00 5.03
6548 9854 7.220741 AGTTTTATCTTCTCTTTTCTTGGCC 57.779 36.000 0.00 0.00 0.00 5.36
6634 9940 2.248280 ACATACTTGTCGTGTTGCCA 57.752 45.000 0.00 0.00 0.00 4.92
6660 9966 8.768019 AGACGGTTCACTTAAGTTATGTTTTAC 58.232 33.333 5.07 0.00 0.00 2.01
6661 9967 8.667076 ACGGTTCACTTAAGTTATGTTTTACT 57.333 30.769 5.07 0.00 0.00 2.24
6662 9968 9.762933 ACGGTTCACTTAAGTTATGTTTTACTA 57.237 29.630 5.07 0.00 0.00 1.82
6690 9996 7.516198 AACTTTAAACTGATCAAGCATGACT 57.484 32.000 0.00 0.00 38.69 3.41
6692 9998 6.939163 ACTTTAAACTGATCAAGCATGACTCT 59.061 34.615 0.00 0.00 38.69 3.24
6704 10010 2.096367 GCATGACTCTGCTTATGATGCG 60.096 50.000 0.00 0.00 39.12 4.73
6707 10013 2.094026 TGACTCTGCTTATGATGCGTGT 60.094 45.455 0.00 0.00 0.00 4.49
6718 10024 0.030638 GATGCGTGTTGTTGCAAGGT 59.969 50.000 0.00 0.00 45.45 3.50
6719 10025 0.030638 ATGCGTGTTGTTGCAAGGTC 59.969 50.000 0.00 0.00 45.45 3.85
6722 10028 1.069906 GCGTGTTGTTGCAAGGTCTAG 60.070 52.381 0.00 0.00 0.00 2.43
6723 10029 1.531149 CGTGTTGTTGCAAGGTCTAGG 59.469 52.381 0.00 0.00 0.00 3.02
6724 10030 1.880027 GTGTTGTTGCAAGGTCTAGGG 59.120 52.381 0.00 0.00 0.00 3.53
6725 10031 1.493022 TGTTGTTGCAAGGTCTAGGGT 59.507 47.619 0.00 0.00 0.00 4.34
6726 10032 2.706723 TGTTGTTGCAAGGTCTAGGGTA 59.293 45.455 0.00 0.00 0.00 3.69
6727 10033 3.136809 TGTTGTTGCAAGGTCTAGGGTAA 59.863 43.478 0.00 0.00 0.00 2.85
6735 10094 4.607239 CAAGGTCTAGGGTAAGGTAGTGA 58.393 47.826 0.00 0.00 0.00 3.41
6746 10105 4.341520 GGTAAGGTAGTGATGACGAGGAAT 59.658 45.833 0.00 0.00 0.00 3.01
6757 10116 5.594317 TGATGACGAGGAATGACAGATAAGA 59.406 40.000 0.00 0.00 0.00 2.10
6759 10118 4.339530 TGACGAGGAATGACAGATAAGAGG 59.660 45.833 0.00 0.00 0.00 3.69
6760 10119 3.068873 ACGAGGAATGACAGATAAGAGGC 59.931 47.826 0.00 0.00 0.00 4.70
6761 10120 3.068732 CGAGGAATGACAGATAAGAGGCA 59.931 47.826 0.00 0.00 0.00 4.75
6762 10121 4.262377 CGAGGAATGACAGATAAGAGGCAT 60.262 45.833 0.00 0.00 0.00 4.40
6763 10122 4.970711 AGGAATGACAGATAAGAGGCATG 58.029 43.478 0.00 0.00 0.00 4.06
6764 10123 3.501445 GGAATGACAGATAAGAGGCATGC 59.499 47.826 9.90 9.90 0.00 4.06
6765 10124 4.387598 GAATGACAGATAAGAGGCATGCT 58.612 43.478 18.92 3.20 0.00 3.79
6766 10125 3.189618 TGACAGATAAGAGGCATGCTG 57.810 47.619 18.92 7.72 0.00 4.41
6767 10126 1.872313 GACAGATAAGAGGCATGCTGC 59.128 52.381 18.92 9.91 44.08 5.25
6779 10811 2.384433 ATGCTGCCATGCTCCCTCT 61.384 57.895 0.00 0.00 0.00 3.69
6815 10888 1.612146 TCGTGGAGGAGCCCAATGA 60.612 57.895 0.00 0.00 38.06 2.57
6858 10931 1.739750 AGGGGATAATGGAGCAGGAG 58.260 55.000 0.00 0.00 0.00 3.69
6865 10938 0.322277 AATGGAGCAGGAGCAGTGTG 60.322 55.000 0.00 0.00 45.49 3.82
6871 10944 1.825281 GCAGGAGCAGTGTGGAGACT 61.825 60.000 0.00 0.00 41.58 3.24
6872 10945 0.683973 CAGGAGCAGTGTGGAGACTT 59.316 55.000 0.00 0.00 0.00 3.01
6873 10946 0.683973 AGGAGCAGTGTGGAGACTTG 59.316 55.000 0.00 0.00 0.00 3.16
6874 10947 0.321122 GGAGCAGTGTGGAGACTTGG 60.321 60.000 0.00 0.00 0.00 3.61
6875 10948 0.681733 GAGCAGTGTGGAGACTTGGA 59.318 55.000 0.00 0.00 0.00 3.53
6876 10949 0.683973 AGCAGTGTGGAGACTTGGAG 59.316 55.000 0.00 0.00 0.00 3.86
6878 10951 1.875576 GCAGTGTGGAGACTTGGAGTG 60.876 57.143 0.00 0.00 0.00 3.51
6879 10952 1.051812 AGTGTGGAGACTTGGAGTGG 58.948 55.000 0.00 0.00 0.00 4.00
6881 10954 1.001406 GTGTGGAGACTTGGAGTGGAG 59.999 57.143 0.00 0.00 0.00 3.86
6882 10955 0.036858 GTGGAGACTTGGAGTGGAGC 60.037 60.000 0.00 0.00 0.00 4.70
6883 10956 1.216710 GGAGACTTGGAGTGGAGCG 59.783 63.158 0.00 0.00 0.00 5.03
6884 10957 1.446966 GAGACTTGGAGTGGAGCGC 60.447 63.158 0.00 0.00 0.00 5.92
6910 11004 2.292559 TGGTAGTTGCCCGTACCCC 61.293 63.158 3.70 0.00 38.38 4.95
6949 11043 2.229690 AAATGCGATTGTGGGCAGGC 62.230 55.000 0.00 0.00 43.27 4.85
6959 11056 2.436824 GGGCAGGCGGTTTCTCTC 60.437 66.667 0.00 0.00 0.00 3.20
7044 11141 3.850454 GGGGATCCCATTCCTTTCC 57.150 57.895 32.07 7.65 44.65 3.13
7051 11148 1.786441 TCCCATTCCTTTCCTGTGGTT 59.214 47.619 0.00 0.00 0.00 3.67
7074 11178 4.770874 ATACGCGGGTGTGGTGGC 62.771 66.667 16.34 0.00 0.00 5.01
7099 11203 3.282885 GGAAGGATGAGGACAATTCCAC 58.717 50.000 0.00 0.00 45.72 4.02
7101 11205 1.017387 GGATGAGGACAATTCCACGC 58.983 55.000 0.00 0.00 45.72 5.34
7103 11207 0.744414 ATGAGGACAATTCCACGCCG 60.744 55.000 0.00 0.00 45.72 6.46
7106 11210 0.953960 AGGACAATTCCACGCCGAAC 60.954 55.000 0.00 0.00 45.72 3.95
7109 11213 0.591170 ACAATTCCACGCCGAACAAG 59.409 50.000 0.00 0.00 0.00 3.16
7110 11214 0.109781 CAATTCCACGCCGAACAAGG 60.110 55.000 0.00 0.00 0.00 3.61
7129 11233 3.555966 AGGTTGTCTTGGTTTTCTCCAG 58.444 45.455 0.00 0.00 38.80 3.86
7134 11238 2.952310 GTCTTGGTTTTCTCCAGTGCTT 59.048 45.455 0.00 0.00 38.80 3.91
7138 11242 2.172505 TGGTTTTCTCCAGTGCTTCTCA 59.827 45.455 0.00 0.00 33.19 3.27
7173 11277 1.421485 CATGACGGCGTTGAGAAGC 59.579 57.895 16.19 0.00 0.00 3.86
7174 11278 2.094659 ATGACGGCGTTGAGAAGCG 61.095 57.895 16.19 0.00 0.00 4.68
7180 11284 1.741770 GCGTTGAGAAGCGGATGGT 60.742 57.895 0.00 0.00 0.00 3.55
7190 11294 1.227002 GCGGATGGTCTCGTCTTCC 60.227 63.158 0.00 0.00 0.00 3.46
7214 11318 4.109675 CCGGTTGGGGCGGAGATT 62.110 66.667 0.00 0.00 0.00 2.40
7215 11319 2.737881 CCGGTTGGGGCGGAGATTA 61.738 63.158 0.00 0.00 0.00 1.75
7216 11320 1.227556 CGGTTGGGGCGGAGATTAG 60.228 63.158 0.00 0.00 0.00 1.73
7217 11321 1.148498 GGTTGGGGCGGAGATTAGG 59.852 63.158 0.00 0.00 0.00 2.69
7218 11322 1.526225 GTTGGGGCGGAGATTAGGC 60.526 63.158 0.00 0.00 0.00 3.93
7240 11345 4.081972 GCCTTCTTTTCCTCTCCATTTTCC 60.082 45.833 0.00 0.00 0.00 3.13
7241 11346 4.156739 CCTTCTTTTCCTCTCCATTTTCCG 59.843 45.833 0.00 0.00 0.00 4.30
7246 11357 5.897377 TTTCCTCTCCATTTTCCGAATTC 57.103 39.130 0.00 0.00 0.00 2.17
7250 11361 3.006940 TCTCCATTTTCCGAATTCGTGG 58.993 45.455 25.10 23.40 37.74 4.94
7254 11365 2.953640 TTTTCCGAATTCGTGGTTCG 57.046 45.000 25.10 9.84 45.83 3.95
7262 11373 2.806929 TCGTGGTTCGACGGTTGT 59.193 55.556 7.41 0.00 44.01 3.32
7269 11380 1.006571 TTCGACGGTTGTGGCTCTC 60.007 57.895 0.00 0.00 0.00 3.20
7279 11390 2.742372 TGGCTCTCGCGCTTTTCC 60.742 61.111 5.56 0.38 36.88 3.13
7280 11391 3.500642 GGCTCTCGCGCTTTTCCC 61.501 66.667 5.56 0.00 36.88 3.97
7285 11396 4.071875 TCGCGCTTTTCCCGGCTA 62.072 61.111 5.56 0.00 0.00 3.93
7286 11397 3.861263 CGCGCTTTTCCCGGCTAC 61.861 66.667 5.56 0.00 0.00 3.58
7287 11398 3.861263 GCGCTTTTCCCGGCTACG 61.861 66.667 0.00 0.00 40.55 3.51
7288 11399 2.433664 CGCTTTTCCCGGCTACGT 60.434 61.111 0.00 0.00 38.78 3.57
7289 11400 2.450345 CGCTTTTCCCGGCTACGTC 61.450 63.158 0.00 0.00 38.78 4.34
7290 11401 1.079336 GCTTTTCCCGGCTACGTCT 60.079 57.895 0.00 0.00 38.78 4.18
7291 11402 1.359459 GCTTTTCCCGGCTACGTCTG 61.359 60.000 0.00 0.00 38.78 3.51
7292 11403 0.037605 CTTTTCCCGGCTACGTCTGT 60.038 55.000 0.00 0.00 38.78 3.41
7293 11404 0.320073 TTTTCCCGGCTACGTCTGTG 60.320 55.000 0.00 0.00 38.78 3.66
7301 11421 1.226974 CTACGTCTGTGGGATGCGG 60.227 63.158 0.00 0.00 34.46 5.69
7313 11433 1.442017 GATGCGGCGGTTTTGTGTC 60.442 57.895 9.78 0.00 0.00 3.67
7324 11444 2.890945 GGTTTTGTGTCCAGGTTAGCAT 59.109 45.455 0.00 0.00 0.00 3.79
7332 11452 1.922447 TCCAGGTTAGCATGGGATGTT 59.078 47.619 10.52 0.00 45.85 2.71
7333 11453 2.092429 TCCAGGTTAGCATGGGATGTTC 60.092 50.000 10.52 0.00 45.85 3.18
7334 11454 2.301346 CAGGTTAGCATGGGATGTTCC 58.699 52.381 0.00 0.00 35.23 3.62
7335 11455 2.092212 CAGGTTAGCATGGGATGTTCCT 60.092 50.000 0.00 0.00 36.57 3.36
7336 11456 2.092212 AGGTTAGCATGGGATGTTCCTG 60.092 50.000 0.00 0.00 36.57 3.86
7337 11457 1.678101 GTTAGCATGGGATGTTCCTGC 59.322 52.381 0.00 0.75 36.57 4.85
7338 11458 0.183492 TAGCATGGGATGTTCCTGCC 59.817 55.000 0.00 0.00 36.57 4.85
7339 11459 2.484062 GCATGGGATGTTCCTGCCG 61.484 63.158 0.00 0.00 36.57 5.69
7340 11460 1.077501 CATGGGATGTTCCTGCCGT 60.078 57.895 0.00 0.00 36.57 5.68
7341 11461 0.180171 CATGGGATGTTCCTGCCGTA 59.820 55.000 0.00 0.00 36.57 4.02
7342 11462 0.469917 ATGGGATGTTCCTGCCGTAG 59.530 55.000 0.00 0.00 36.57 3.51
7343 11463 0.907704 TGGGATGTTCCTGCCGTAGT 60.908 55.000 0.00 0.00 36.57 2.73
7344 11464 0.462047 GGGATGTTCCTGCCGTAGTG 60.462 60.000 0.00 0.00 36.57 2.74
7345 11465 0.462047 GGATGTTCCTGCCGTAGTGG 60.462 60.000 0.00 0.00 35.35 4.00
7354 11474 3.309582 CCGTAGTGGCATGTCCCT 58.690 61.111 0.00 0.00 0.00 4.20
7355 11475 1.602237 CCGTAGTGGCATGTCCCTT 59.398 57.895 0.00 0.00 0.00 3.95
7356 11476 0.744414 CCGTAGTGGCATGTCCCTTG 60.744 60.000 0.00 0.00 0.00 3.61
7357 11477 0.036388 CGTAGTGGCATGTCCCTTGT 60.036 55.000 0.00 0.00 0.00 3.16
7358 11478 1.206132 CGTAGTGGCATGTCCCTTGTA 59.794 52.381 0.00 0.00 0.00 2.41
7359 11479 2.354303 CGTAGTGGCATGTCCCTTGTAA 60.354 50.000 0.00 0.00 0.00 2.41
7360 11480 2.200373 AGTGGCATGTCCCTTGTAAC 57.800 50.000 0.00 0.00 0.00 2.50
7361 11481 0.802494 GTGGCATGTCCCTTGTAACG 59.198 55.000 0.00 0.00 0.00 3.18
7362 11482 0.322098 TGGCATGTCCCTTGTAACGG 60.322 55.000 0.00 0.00 0.00 4.44
7363 11483 1.029947 GGCATGTCCCTTGTAACGGG 61.030 60.000 0.00 0.00 43.38 5.28
7364 11484 0.322187 GCATGTCCCTTGTAACGGGT 60.322 55.000 0.00 0.00 42.56 5.28
7365 11485 1.884928 GCATGTCCCTTGTAACGGGTT 60.885 52.381 0.00 0.00 42.56 4.11
7366 11486 2.616001 GCATGTCCCTTGTAACGGGTTA 60.616 50.000 0.00 0.00 42.56 2.85
7367 11487 3.267483 CATGTCCCTTGTAACGGGTTAG 58.733 50.000 0.00 0.00 42.56 2.34
7368 11488 1.624813 TGTCCCTTGTAACGGGTTAGG 59.375 52.381 0.00 0.00 42.56 2.69
7369 11489 1.901833 GTCCCTTGTAACGGGTTAGGA 59.098 52.381 1.32 0.00 42.56 2.94
7370 11490 2.502947 GTCCCTTGTAACGGGTTAGGAT 59.497 50.000 1.32 0.00 42.56 3.24
7371 11491 2.767960 TCCCTTGTAACGGGTTAGGATC 59.232 50.000 1.32 0.00 42.56 3.36
7372 11492 2.158856 CCCTTGTAACGGGTTAGGATCC 60.159 54.545 2.48 2.48 36.91 3.36
7373 11493 2.770232 CCTTGTAACGGGTTAGGATCCT 59.230 50.000 20.48 20.48 0.00 3.24
7374 11494 3.199289 CCTTGTAACGGGTTAGGATCCTT 59.801 47.826 22.03 1.76 0.00 3.36
7375 11495 4.324022 CCTTGTAACGGGTTAGGATCCTTT 60.324 45.833 22.03 9.54 0.00 3.11
7376 11496 4.210724 TGTAACGGGTTAGGATCCTTTG 57.789 45.455 22.03 8.13 0.00 2.77
7377 11497 2.801077 AACGGGTTAGGATCCTTTGG 57.199 50.000 22.03 7.93 0.00 3.28
7378 11498 1.665137 ACGGGTTAGGATCCTTTGGT 58.335 50.000 22.03 8.59 0.00 3.67
7379 11499 1.280998 ACGGGTTAGGATCCTTTGGTG 59.719 52.381 22.03 10.34 0.00 4.17
7380 11500 1.280998 CGGGTTAGGATCCTTTGGTGT 59.719 52.381 22.03 0.00 0.00 4.16
7381 11501 2.502538 CGGGTTAGGATCCTTTGGTGTA 59.497 50.000 22.03 0.00 0.00 2.90
7382 11502 3.431766 CGGGTTAGGATCCTTTGGTGTAG 60.432 52.174 22.03 0.78 0.00 2.74
7383 11503 3.542648 GGTTAGGATCCTTTGGTGTAGC 58.457 50.000 22.03 1.24 0.00 3.58
7384 11504 3.195661 GTTAGGATCCTTTGGTGTAGCG 58.804 50.000 22.03 0.00 0.00 4.26
7385 11505 1.276622 AGGATCCTTTGGTGTAGCGT 58.723 50.000 9.02 0.00 0.00 5.07
7386 11506 2.463752 AGGATCCTTTGGTGTAGCGTA 58.536 47.619 9.02 0.00 0.00 4.42
7387 11507 3.039011 AGGATCCTTTGGTGTAGCGTAT 58.961 45.455 9.02 0.00 0.00 3.06
7388 11508 3.069729 AGGATCCTTTGGTGTAGCGTATC 59.930 47.826 9.02 0.00 0.00 2.24
7389 11509 3.181469 GGATCCTTTGGTGTAGCGTATCA 60.181 47.826 3.84 0.00 0.00 2.15
7390 11510 4.503296 GGATCCTTTGGTGTAGCGTATCAT 60.503 45.833 3.84 0.00 0.00 2.45
7391 11511 3.792401 TCCTTTGGTGTAGCGTATCATG 58.208 45.455 0.00 0.00 0.00 3.07
7392 11512 2.287915 CCTTTGGTGTAGCGTATCATGC 59.712 50.000 0.00 0.00 0.00 4.06
7393 11513 2.682155 TTGGTGTAGCGTATCATGCA 57.318 45.000 0.00 0.00 31.07 3.96
7394 11514 2.223537 TGGTGTAGCGTATCATGCAG 57.776 50.000 0.00 0.00 31.07 4.41
7395 11515 1.480545 TGGTGTAGCGTATCATGCAGT 59.519 47.619 0.00 0.00 31.07 4.40
7396 11516 2.691011 TGGTGTAGCGTATCATGCAGTA 59.309 45.455 0.00 0.00 31.07 2.74
7397 11517 3.050619 GGTGTAGCGTATCATGCAGTAC 58.949 50.000 0.00 0.00 31.07 2.73
7398 11518 2.719556 GTGTAGCGTATCATGCAGTACG 59.280 50.000 18.95 18.95 44.68 3.67
7399 11519 2.614983 TGTAGCGTATCATGCAGTACGA 59.385 45.455 24.38 6.79 44.67 3.43
7400 11520 3.252458 TGTAGCGTATCATGCAGTACGAT 59.748 43.478 24.38 21.68 44.67 3.73
7401 11521 2.935042 AGCGTATCATGCAGTACGATC 58.065 47.619 24.38 12.79 44.67 3.69
7402 11522 2.293399 AGCGTATCATGCAGTACGATCA 59.707 45.455 24.38 0.00 44.67 2.92
7403 11523 2.405357 GCGTATCATGCAGTACGATCAC 59.595 50.000 24.38 9.58 44.67 3.06
7404 11524 3.853676 GCGTATCATGCAGTACGATCACT 60.854 47.826 24.38 0.00 44.67 3.41
7406 11526 3.808466 ATCATGCAGTACGATCACTGT 57.192 42.857 13.14 0.00 46.31 3.55
7407 11527 3.150848 TCATGCAGTACGATCACTGTC 57.849 47.619 13.14 7.51 46.31 3.51
7408 11528 2.491693 TCATGCAGTACGATCACTGTCA 59.508 45.455 13.14 11.68 46.31 3.58
7409 11529 3.131046 TCATGCAGTACGATCACTGTCAT 59.869 43.478 13.14 12.99 46.31 3.06
7410 11530 4.338118 TCATGCAGTACGATCACTGTCATA 59.662 41.667 13.14 1.43 46.31 2.15
7411 11531 4.918810 TGCAGTACGATCACTGTCATAT 57.081 40.909 13.14 0.00 46.31 1.78
7412 11532 4.610945 TGCAGTACGATCACTGTCATATG 58.389 43.478 13.14 0.00 46.31 1.78
7413 11533 3.983988 GCAGTACGATCACTGTCATATGG 59.016 47.826 13.14 0.00 46.31 2.74
7414 11534 4.261614 GCAGTACGATCACTGTCATATGGA 60.262 45.833 13.14 0.00 46.31 3.41
7415 11535 6.295156 GCAGTACGATCACTGTCATATGGAC 61.295 48.000 13.14 0.89 46.31 4.02
7416 11536 3.735237 ACGATCACTGTCATATGGACC 57.265 47.619 2.13 0.00 46.38 4.46
7417 11537 2.365617 ACGATCACTGTCATATGGACCC 59.634 50.000 2.13 0.00 46.38 4.46
7418 11538 2.608016 CGATCACTGTCATATGGACCCG 60.608 54.545 2.13 0.00 46.38 5.28
7419 11539 1.119684 TCACTGTCATATGGACCCGG 58.880 55.000 2.13 0.00 46.38 5.73
7420 11540 0.830648 CACTGTCATATGGACCCGGT 59.169 55.000 0.00 0.00 46.38 5.28
7421 11541 1.120530 ACTGTCATATGGACCCGGTC 58.879 55.000 9.30 9.30 46.38 4.79
7429 11549 2.045340 GGACCCGGTCCCATGTTG 60.045 66.667 24.59 0.00 46.19 3.33
7430 11550 2.754375 GACCCGGTCCCATGTTGT 59.246 61.111 6.25 0.00 0.00 3.32
7431 11551 1.376812 GACCCGGTCCCATGTTGTC 60.377 63.158 6.25 0.00 0.00 3.18
7432 11552 2.119484 GACCCGGTCCCATGTTGTCA 62.119 60.000 6.25 0.00 0.00 3.58
7433 11553 1.302949 CCCGGTCCCATGTTGTCAT 59.697 57.895 0.00 0.00 34.21 3.06
7434 11554 0.748005 CCCGGTCCCATGTTGTCATC 60.748 60.000 0.00 0.00 31.15 2.92
7435 11555 0.748005 CCGGTCCCATGTTGTCATCC 60.748 60.000 0.00 0.00 31.15 3.51
7436 11556 1.089481 CGGTCCCATGTTGTCATCCG 61.089 60.000 0.00 0.00 33.64 4.18
7437 11557 1.376609 GGTCCCATGTTGTCATCCGC 61.377 60.000 0.00 0.00 31.15 5.54
7438 11558 0.676466 GTCCCATGTTGTCATCCGCA 60.676 55.000 0.00 0.00 31.15 5.69
7439 11559 0.676466 TCCCATGTTGTCATCCGCAC 60.676 55.000 0.00 0.00 31.15 5.34
7440 11560 0.677731 CCCATGTTGTCATCCGCACT 60.678 55.000 0.00 0.00 31.15 4.40
7441 11561 1.406751 CCCATGTTGTCATCCGCACTA 60.407 52.381 0.00 0.00 31.15 2.74
7442 11562 1.665679 CCATGTTGTCATCCGCACTAC 59.334 52.381 0.00 0.00 31.15 2.73
7443 11563 2.345876 CATGTTGTCATCCGCACTACA 58.654 47.619 0.00 0.00 34.66 2.74
7444 11564 2.078849 TGTTGTCATCCGCACTACAG 57.921 50.000 0.00 0.00 0.00 2.74
7445 11565 1.343142 TGTTGTCATCCGCACTACAGT 59.657 47.619 0.00 0.00 0.00 3.55
7446 11566 2.559231 TGTTGTCATCCGCACTACAGTA 59.441 45.455 0.00 0.00 0.00 2.74
7447 11567 2.921754 GTTGTCATCCGCACTACAGTAC 59.078 50.000 0.00 0.00 0.00 2.73
7448 11568 1.131693 TGTCATCCGCACTACAGTACG 59.868 52.381 0.00 0.00 34.77 3.67
7449 11569 1.399440 GTCATCCGCACTACAGTACGA 59.601 52.381 3.58 0.00 36.98 3.43
7450 11570 2.033049 GTCATCCGCACTACAGTACGAT 59.967 50.000 3.58 0.00 36.98 3.73
7451 11571 3.249320 GTCATCCGCACTACAGTACGATA 59.751 47.826 3.58 0.00 36.98 2.92
7452 11572 3.249320 TCATCCGCACTACAGTACGATAC 59.751 47.826 3.58 0.00 36.98 2.24
7453 11573 2.631267 TCCGCACTACAGTACGATACA 58.369 47.619 3.58 0.00 36.98 2.29
7454 11574 2.610833 TCCGCACTACAGTACGATACAG 59.389 50.000 3.58 0.00 36.98 2.74
7455 11575 2.353889 CCGCACTACAGTACGATACAGT 59.646 50.000 3.58 0.00 36.98 3.55
7456 11576 3.557185 CCGCACTACAGTACGATACAGTA 59.443 47.826 3.58 0.00 36.98 2.74
7457 11577 4.512657 CGCACTACAGTACGATACAGTAC 58.487 47.826 0.00 0.00 45.31 2.73
7465 11585 4.212213 GTACGATACAGTACTGCAGAGG 57.788 50.000 23.35 10.81 42.58 3.69
7466 11586 3.000684 ACGATACAGTACTGCAGAGGA 57.999 47.619 23.35 4.04 0.00 3.71
7467 11587 3.556999 ACGATACAGTACTGCAGAGGAT 58.443 45.455 23.35 9.14 0.00 3.24
7468 11588 3.566322 ACGATACAGTACTGCAGAGGATC 59.434 47.826 23.35 16.24 0.00 3.36
7469 11589 7.457740 GTACGATACAGTACTGCAGAGGATCT 61.458 46.154 23.35 7.80 44.43 2.75
7470 11590 9.154928 GTACGATACAGTACTGCAGAGGATCTC 62.155 48.148 23.35 7.64 43.03 2.75
7484 11604 5.230323 GAGGATCTCAACCCCCTTATAAC 57.770 47.826 0.00 0.00 0.00 1.89
7485 11605 4.641868 AGGATCTCAACCCCCTTATAACA 58.358 43.478 0.00 0.00 0.00 2.41
7486 11606 5.235534 AGGATCTCAACCCCCTTATAACAT 58.764 41.667 0.00 0.00 0.00 2.71
7487 11607 5.073691 AGGATCTCAACCCCCTTATAACATG 59.926 44.000 0.00 0.00 0.00 3.21
7488 11608 5.073144 GGATCTCAACCCCCTTATAACATGA 59.927 44.000 0.00 0.00 0.00 3.07
7489 11609 6.410388 GGATCTCAACCCCCTTATAACATGAA 60.410 42.308 0.00 0.00 0.00 2.57
7490 11610 6.590656 TCTCAACCCCCTTATAACATGAAT 57.409 37.500 0.00 0.00 0.00 2.57
7491 11611 6.364701 TCTCAACCCCCTTATAACATGAATG 58.635 40.000 0.00 0.00 0.00 2.67
7492 11612 6.069088 TCTCAACCCCCTTATAACATGAATGT 60.069 38.462 0.00 0.00 44.20 2.71
7515 11635 9.793259 ATGTTTAACTTAGAAACTCTTCATGGA 57.207 29.630 0.00 0.00 37.62 3.41
7516 11636 9.273016 TGTTTAACTTAGAAACTCTTCATGGAG 57.727 33.333 0.00 0.00 37.62 3.86
7517 11637 9.490379 GTTTAACTTAGAAACTCTTCATGGAGA 57.510 33.333 3.02 3.02 37.13 3.71
7519 11639 9.658799 TTAACTTAGAAACTCTTCATGGAGATG 57.341 33.333 3.55 1.64 37.13 2.90
7520 11640 6.648192 ACTTAGAAACTCTTCATGGAGATGG 58.352 40.000 3.55 0.00 37.13 3.51
7521 11641 6.214412 ACTTAGAAACTCTTCATGGAGATGGT 59.786 38.462 3.55 0.00 37.13 3.55
7522 11642 4.841422 AGAAACTCTTCATGGAGATGGTG 58.159 43.478 3.55 0.00 37.13 4.17
7523 11643 4.288105 AGAAACTCTTCATGGAGATGGTGT 59.712 41.667 3.55 0.00 37.13 4.16
7524 11644 4.647564 AACTCTTCATGGAGATGGTGTT 57.352 40.909 3.55 2.28 37.13 3.32
7525 11645 5.762179 AACTCTTCATGGAGATGGTGTTA 57.238 39.130 3.55 0.00 37.13 2.41
7526 11646 5.762179 ACTCTTCATGGAGATGGTGTTAA 57.238 39.130 3.55 0.00 37.13 2.01
7527 11647 5.738909 ACTCTTCATGGAGATGGTGTTAAG 58.261 41.667 3.55 0.00 37.13 1.85
7528 11648 5.249393 ACTCTTCATGGAGATGGTGTTAAGT 59.751 40.000 3.55 0.00 37.13 2.24
7529 11649 5.491070 TCTTCATGGAGATGGTGTTAAGTG 58.509 41.667 0.00 0.00 0.00 3.16
7530 11650 4.908601 TCATGGAGATGGTGTTAAGTGT 57.091 40.909 0.00 0.00 0.00 3.55
7531 11651 4.832248 TCATGGAGATGGTGTTAAGTGTC 58.168 43.478 0.00 0.00 0.00 3.67
7532 11652 4.285775 TCATGGAGATGGTGTTAAGTGTCA 59.714 41.667 0.00 0.00 0.00 3.58
7533 11653 4.002906 TGGAGATGGTGTTAAGTGTCAC 57.997 45.455 0.00 0.00 0.00 3.67
7534 11654 2.993899 GGAGATGGTGTTAAGTGTCACG 59.006 50.000 0.00 0.00 35.67 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.991121 AGGGTGGCATGCATATGAAG 58.009 50.000 21.36 0.00 36.36 3.02
66 67 6.375174 CAGATTCATGGAATTGTCTACACCAA 59.625 38.462 0.00 0.00 31.89 3.67
84 85 9.770097 GATAGTATGGATTTGAAGTCAGATTCA 57.230 33.333 0.00 0.00 37.41 2.57
88 89 8.762645 AGTTGATAGTATGGATTTGAAGTCAGA 58.237 33.333 0.00 0.00 0.00 3.27
89 90 8.954950 AGTTGATAGTATGGATTTGAAGTCAG 57.045 34.615 0.00 0.00 0.00 3.51
118 120 6.730960 TCAACAAGAAGTACGTTGTCTTTT 57.269 33.333 10.50 0.00 40.65 2.27
122 124 5.459110 TGTTCAACAAGAAGTACGTTGTC 57.541 39.130 10.50 6.65 40.65 3.18
142 144 2.576648 GGACCTAATTGACTCCCCTTGT 59.423 50.000 0.00 0.00 0.00 3.16
159 161 0.605319 TGCTCCATCGTGTTTGGACC 60.605 55.000 0.00 0.00 38.35 4.46
169 171 1.026584 TCATGCCAAATGCTCCATCG 58.973 50.000 0.00 0.00 42.00 3.84
170 172 2.891580 AGATCATGCCAAATGCTCCATC 59.108 45.455 0.00 0.00 42.00 3.51
175 177 4.726583 AGTCATAGATCATGCCAAATGCT 58.273 39.130 0.00 0.00 42.00 3.79
202 204 2.757868 GGTGGCTATGTGTTGGCAATAA 59.242 45.455 1.92 0.00 40.35 1.40
244 246 9.260002 CACACACACACACACACATATATATAT 57.740 33.333 0.00 0.00 0.00 0.86
247 249 6.367422 CACACACACACACACACACATATATA 59.633 38.462 0.00 0.00 0.00 0.86
248 250 5.179182 CACACACACACACACACACATATAT 59.821 40.000 0.00 0.00 0.00 0.86
249 251 4.509600 CACACACACACACACACACATATA 59.490 41.667 0.00 0.00 0.00 0.86
250 252 3.312146 CACACACACACACACACACATAT 59.688 43.478 0.00 0.00 0.00 1.78
251 253 2.675348 CACACACACACACACACACATA 59.325 45.455 0.00 0.00 0.00 2.29
252 254 1.468127 CACACACACACACACACACAT 59.532 47.619 0.00 0.00 0.00 3.21
253 255 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
254 256 1.152510 TCACACACACACACACACAC 58.847 50.000 0.00 0.00 0.00 3.82
255 257 1.884235 TTCACACACACACACACACA 58.116 45.000 0.00 0.00 0.00 3.72
256 258 2.979401 TTTCACACACACACACACAC 57.021 45.000 0.00 0.00 0.00 3.82
257 259 5.412904 TCTTATTTTCACACACACACACACA 59.587 36.000 0.00 0.00 0.00 3.72
258 260 5.737290 GTCTTATTTTCACACACACACACAC 59.263 40.000 0.00 0.00 0.00 3.82
259 261 5.645929 AGTCTTATTTTCACACACACACACA 59.354 36.000 0.00 0.00 0.00 3.72
260 262 5.965334 CAGTCTTATTTTCACACACACACAC 59.035 40.000 0.00 0.00 0.00 3.82
261 263 5.645929 ACAGTCTTATTTTCACACACACACA 59.354 36.000 0.00 0.00 0.00 3.72
262 264 5.965334 CACAGTCTTATTTTCACACACACAC 59.035 40.000 0.00 0.00 0.00 3.82
263 265 5.645929 ACACAGTCTTATTTTCACACACACA 59.354 36.000 0.00 0.00 0.00 3.72
264 266 6.119144 ACACAGTCTTATTTTCACACACAC 57.881 37.500 0.00 0.00 0.00 3.82
265 267 5.295787 GGACACAGTCTTATTTTCACACACA 59.704 40.000 0.00 0.00 32.47 3.72
266 268 5.527582 AGGACACAGTCTTATTTTCACACAC 59.472 40.000 0.00 0.00 32.47 3.82
267 269 5.680619 AGGACACAGTCTTATTTTCACACA 58.319 37.500 0.00 0.00 32.47 3.72
268 270 5.107453 CGAGGACACAGTCTTATTTTCACAC 60.107 44.000 0.00 0.00 32.47 3.82
269 271 4.988540 CGAGGACACAGTCTTATTTTCACA 59.011 41.667 0.00 0.00 32.47 3.58
270 272 4.389077 CCGAGGACACAGTCTTATTTTCAC 59.611 45.833 0.00 0.00 32.47 3.18
271 273 4.039973 ACCGAGGACACAGTCTTATTTTCA 59.960 41.667 0.00 0.00 32.47 2.69
272 274 4.389077 CACCGAGGACACAGTCTTATTTTC 59.611 45.833 0.00 0.00 32.47 2.29
277 279 2.281539 TCACCGAGGACACAGTCTTA 57.718 50.000 0.00 0.00 32.47 2.10
282 284 1.248486 TCTCTTCACCGAGGACACAG 58.752 55.000 0.00 0.00 0.00 3.66
338 340 1.523154 GGTGAACGCCATTGAGCCAA 61.523 55.000 0.00 0.00 0.00 4.52
390 392 5.705609 TTTATTCCTCTTTTGTGACTGGC 57.294 39.130 0.00 0.00 0.00 4.85
412 414 6.546484 TCAGGTGATTTCATCTCTCCTTTTT 58.454 36.000 0.00 0.00 34.53 1.94
457 459 1.351017 TGAGCCCTTCTGGATTCGTTT 59.649 47.619 0.00 0.00 35.39 3.60
468 470 6.455360 TCATTTGTTATGAATGAGCCCTTC 57.545 37.500 0.00 0.00 38.29 3.46
524 526 7.750229 TTCTGAAAAGCAATCTTGTATCACT 57.250 32.000 0.00 0.00 31.78 3.41
532 534 6.292488 CGCAAACATTTCTGAAAAGCAATCTT 60.292 34.615 6.95 0.00 0.00 2.40
560 562 4.345257 ACTTAGATCTCACACGGGCATATT 59.655 41.667 0.00 0.00 0.00 1.28
567 569 7.706607 TGATATTCAAACTTAGATCTCACACGG 59.293 37.037 0.00 0.00 0.00 4.94
589 2350 6.127168 ACCGATGTATTCCTCACAACTTGATA 60.127 38.462 0.00 0.00 32.17 2.15
626 2387 1.134788 AGACCCCAAGCGTCTAAATCG 60.135 52.381 0.00 0.00 38.82 3.34
675 2436 2.170607 CCCTCCGTCCATAGTGAACATT 59.829 50.000 0.00 0.00 0.00 2.71
705 2466 8.757982 ATCTAAAACAATAATCCATGAGTGCT 57.242 30.769 0.00 0.00 0.00 4.40
796 2687 3.568430 ACCTCCGTCCAGAAAAATTGTTC 59.432 43.478 0.00 0.00 0.00 3.18
807 2699 4.451900 AGCATTTTATTACCTCCGTCCAG 58.548 43.478 0.00 0.00 0.00 3.86
808 2700 4.497291 AGCATTTTATTACCTCCGTCCA 57.503 40.909 0.00 0.00 0.00 4.02
899 2791 3.796178 CACACATTTCGTTTTGAACCCTG 59.204 43.478 0.00 0.00 35.97 4.45
906 2798 1.127701 CGGCCACACATTTCGTTTTG 58.872 50.000 2.24 0.00 0.00 2.44
956 2848 4.389576 GCGCTTGCGAGTGGTTGG 62.390 66.667 19.55 0.00 33.93 3.77
1377 3270 2.654912 CGAGGTCGTCGTTGTTGGC 61.655 63.158 6.77 0.00 44.20 4.52
1603 3496 6.471519 GTGAATCAGATTGCATCAGCTTAAAC 59.528 38.462 0.00 0.00 42.74 2.01
2066 4003 3.504906 CACATGTCCTGTTGAGAAATGCT 59.495 43.478 0.00 0.00 35.29 3.79
2172 4340 5.497474 AGTTGTAGGGACATAAAATCGCTT 58.503 37.500 0.00 0.00 39.77 4.68
2173 4341 5.099042 AGTTGTAGGGACATAAAATCGCT 57.901 39.130 0.00 0.00 41.73 4.93
2464 4634 5.899631 ACCAAAACTTAGTAAGGTCTGGA 57.100 39.130 24.33 0.00 32.15 3.86
2469 4639 6.429151 ACCTGAAACCAAAACTTAGTAAGGT 58.571 36.000 14.36 4.57 0.00 3.50
2549 4719 6.210784 AGAGTACAACACACAGAGCCTTATTA 59.789 38.462 0.00 0.00 0.00 0.98
2674 4890 4.669283 GCGCTTTGAGTATAAATAAACGGC 59.331 41.667 0.00 0.00 0.00 5.68
2747 4963 3.683581 GCTGGCTAAAACTTCAGCG 57.316 52.632 0.00 0.00 42.24 5.18
3157 5378 3.564225 GGACTATTAAATGAGCAACCCCG 59.436 47.826 0.00 0.00 0.00 5.73
3162 5383 8.090788 AGGAGTAAGGACTATTAAATGAGCAA 57.909 34.615 0.00 0.00 35.45 3.91
3322 5558 2.137528 TCCACGTCAGAGCACCCAA 61.138 57.895 0.00 0.00 0.00 4.12
3352 5588 5.103515 ACCTAACTGATAAATCCTGGGCATT 60.104 40.000 0.00 0.00 0.00 3.56
3477 6039 0.692756 TCCCGCCCAGATCCAATGTA 60.693 55.000 0.00 0.00 0.00 2.29
3602 6207 1.115467 CAGTCTCTTCCCCGTATGCT 58.885 55.000 0.00 0.00 0.00 3.79
3629 6234 1.300233 GCTCCCTTCTACCGCATCG 60.300 63.158 0.00 0.00 0.00 3.84
3743 6354 6.262496 GTCAAAAGTTAGGCCCAATAGGTATC 59.738 42.308 0.00 0.00 38.26 2.24
3747 6358 4.340617 TGTCAAAAGTTAGGCCCAATAGG 58.659 43.478 0.00 0.00 39.47 2.57
3750 6361 6.440328 ACATTATGTCAAAAGTTAGGCCCAAT 59.560 34.615 0.00 0.00 0.00 3.16
3765 6376 6.435591 TGGTAGCAAATTCCAACATTATGTCA 59.564 34.615 0.00 0.00 0.00 3.58
3811 6422 7.017551 AGGGAGTAATATATCACATGGCAAGAA 59.982 37.037 0.00 0.00 0.00 2.52
3867 6478 4.868171 CCGCTGATTTAGTACAAAGCTGTA 59.132 41.667 0.00 0.00 36.96 2.74
3868 6479 3.684788 CCGCTGATTTAGTACAAAGCTGT 59.315 43.478 0.00 0.00 39.75 4.40
3869 6480 3.485877 GCCGCTGATTTAGTACAAAGCTG 60.486 47.826 0.00 2.65 0.00 4.24
3870 6481 2.678336 GCCGCTGATTTAGTACAAAGCT 59.322 45.455 0.00 0.00 0.00 3.74
3871 6482 2.418628 TGCCGCTGATTTAGTACAAAGC 59.581 45.455 0.00 0.00 0.00 3.51
3872 6483 4.678509 TTGCCGCTGATTTAGTACAAAG 57.321 40.909 0.00 0.00 0.00 2.77
3915 6526 8.579863 AGGTGCTCCATGAAAATAATAATAAGC 58.420 33.333 7.70 0.00 35.89 3.09
3932 6543 0.392461 GGCGACAATTAGGTGCTCCA 60.392 55.000 7.70 0.00 35.89 3.86
3936 6547 1.423845 CACGGCGACAATTAGGTGC 59.576 57.895 16.62 0.00 0.00 5.01
3978 6589 1.202794 TCATGTTGCTGAGTCAAGGCA 60.203 47.619 3.07 3.07 0.00 4.75
4131 6764 0.321919 TTGCCTGACAGCTGACCATC 60.322 55.000 23.35 8.02 0.00 3.51
4290 6935 8.887036 AATGAAGCGTATGTGTCATATTAGAA 57.113 30.769 3.75 0.00 30.60 2.10
4392 7055 5.402054 AGATACAAAGGGGGCAATCAATA 57.598 39.130 0.00 0.00 0.00 1.90
4954 8225 6.419710 GGAAAACATTAGCAAAAGCTAAACGT 59.580 34.615 13.18 10.71 36.13 3.99
5159 8435 1.537814 CCAAGCTGCAGGCCATGAAA 61.538 55.000 17.12 0.00 43.05 2.69
5195 8471 2.238521 GAGGGATGCCAAAAGAACACA 58.761 47.619 5.86 0.00 0.00 3.72
5241 8517 6.261603 TCAGAGCCAGTAAAAGCATATTGATG 59.738 38.462 0.00 0.00 36.02 3.07
5318 8615 6.097270 AGCAACCTACATCACATATTGCAAAT 59.903 34.615 1.71 0.00 42.60 2.32
5427 8733 3.414549 AAACAAACACATGGTGTCGAC 57.585 42.857 9.11 9.11 46.79 4.20
5617 8923 2.866726 TTTTTGCCGCCTCCTTGCC 61.867 57.895 0.00 0.00 0.00 4.52
5669 8975 4.920340 CGATGTCAGCACCTATATCAGTTC 59.080 45.833 0.00 0.00 0.00 3.01
5757 9063 6.604795 TGTCATCATAGTCTGAGACTTCATCA 59.395 38.462 21.49 2.04 40.28 3.07
6035 9341 4.469227 ACATAGAGAACTGCTTGGAGATGT 59.531 41.667 0.00 0.00 0.00 3.06
6162 9468 3.043465 TCCTCCTCAGAATCTGCAGAT 57.957 47.619 23.75 23.75 36.07 2.90
6163 9469 2.499289 GTTCCTCCTCAGAATCTGCAGA 59.501 50.000 20.79 20.79 0.00 4.26
6199 9505 6.201425 GCTGACTCTGAATGATGATCTTCTTC 59.799 42.308 9.75 10.45 0.00 2.87
6204 9510 4.741235 GCAGCTGACTCTGAATGATGATCT 60.741 45.833 20.43 0.00 36.19 2.75
6231 9537 3.481559 TCTTCAGGTTCCTCCTCAGAT 57.518 47.619 0.00 0.00 46.24 2.90
6234 9540 2.191400 CCATCTTCAGGTTCCTCCTCA 58.809 52.381 0.00 0.00 46.24 3.86
6271 9577 2.381725 TCTGCAGCTGACTCTGAATG 57.618 50.000 20.43 0.00 36.19 2.67
6288 9594 3.481559 TCAGGTTCCTCCTCAGAATCT 57.518 47.619 0.00 0.00 46.24 2.40
6324 9630 6.960620 CAGCTGACTCTGAATGATGATCATCA 60.961 42.308 34.35 34.35 42.61 3.07
6357 9663 2.618241 CTCAGAGTCAGATTCCTCCTCG 59.382 54.545 0.00 0.00 0.00 4.63
6396 9702 7.919091 CACAAAATGCTAAAGAGATGCACATAT 59.081 33.333 0.00 0.00 39.63 1.78
6398 9704 6.097356 CACAAAATGCTAAAGAGATGCACAT 58.903 36.000 0.00 0.00 39.63 3.21
6441 9747 2.100252 CCTAAACCTATCGAACTCGCCA 59.900 50.000 0.00 0.00 39.60 5.69
6493 9799 0.252103 TGTCTGACTCCCACTACCCC 60.252 60.000 9.51 0.00 0.00 4.95
6548 9854 2.154462 AGACAACCAGCCAATTCTTCG 58.846 47.619 0.00 0.00 0.00 3.79
6558 9864 1.269831 ACGACTCTGAAGACAACCAGC 60.270 52.381 0.00 0.00 0.00 4.85
6562 9868 1.340248 TCCCACGACTCTGAAGACAAC 59.660 52.381 0.00 0.00 0.00 3.32
6634 9940 7.797038 AAAACATAACTTAAGTGAACCGTCT 57.203 32.000 9.34 0.00 0.00 4.18
6661 9967 9.844790 CATGCTTGATCAGTTTAAAGTTTCATA 57.155 29.630 0.00 0.13 0.00 2.15
6662 9968 8.579006 TCATGCTTGATCAGTTTAAAGTTTCAT 58.421 29.630 0.00 0.00 0.00 2.57
6690 9996 2.698803 ACAACACGCATCATAAGCAGA 58.301 42.857 0.00 0.00 0.00 4.26
6692 9998 2.668001 GCAACAACACGCATCATAAGCA 60.668 45.455 0.00 0.00 0.00 3.91
6704 10010 1.880027 CCCTAGACCTTGCAACAACAC 59.120 52.381 0.00 0.00 0.00 3.32
6707 10013 3.244770 CCTTACCCTAGACCTTGCAACAA 60.245 47.826 0.00 0.00 0.00 2.83
6718 10024 4.164796 TCGTCATCACTACCTTACCCTAGA 59.835 45.833 0.00 0.00 0.00 2.43
6719 10025 4.458397 TCGTCATCACTACCTTACCCTAG 58.542 47.826 0.00 0.00 0.00 3.02
6722 10028 2.361438 CCTCGTCATCACTACCTTACCC 59.639 54.545 0.00 0.00 0.00 3.69
6723 10029 3.285484 TCCTCGTCATCACTACCTTACC 58.715 50.000 0.00 0.00 0.00 2.85
6724 10030 4.978083 TTCCTCGTCATCACTACCTTAC 57.022 45.455 0.00 0.00 0.00 2.34
6725 10031 5.067413 GTCATTCCTCGTCATCACTACCTTA 59.933 44.000 0.00 0.00 0.00 2.69
6726 10032 4.023980 TCATTCCTCGTCATCACTACCTT 58.976 43.478 0.00 0.00 0.00 3.50
6727 10033 3.381908 GTCATTCCTCGTCATCACTACCT 59.618 47.826 0.00 0.00 0.00 3.08
6735 10094 5.010516 CCTCTTATCTGTCATTCCTCGTCAT 59.989 44.000 0.00 0.00 0.00 3.06
6746 10105 3.189618 CAGCATGCCTCTTATCTGTCA 57.810 47.619 15.66 0.00 0.00 3.58
6760 10119 2.123854 AGGGAGCATGGCAGCATG 60.124 61.111 10.71 0.00 40.87 4.06
6761 10120 2.195139 GAGGGAGCATGGCAGCAT 59.805 61.111 10.71 0.00 36.85 3.79
6762 10121 3.013327 AGAGGGAGCATGGCAGCA 61.013 61.111 10.71 0.00 36.85 4.41
6763 10122 2.516460 CAGAGGGAGCATGGCAGC 60.516 66.667 0.00 0.00 0.00 5.25
6764 10123 2.516460 GCAGAGGGAGCATGGCAG 60.516 66.667 0.00 0.00 0.00 4.85
6765 10124 3.332385 TGCAGAGGGAGCATGGCA 61.332 61.111 0.00 0.00 37.02 4.92
6766 10125 2.516460 CTGCAGAGGGAGCATGGC 60.516 66.667 8.42 0.00 41.82 4.40
6767 10126 2.192443 CCTGCAGAGGGAGCATGG 59.808 66.667 17.39 0.00 41.82 3.66
6779 10811 0.610174 GAGACACACATCCTCCTGCA 59.390 55.000 0.00 0.00 0.00 4.41
6815 10888 2.873427 AGGGGCTTCCTCCTCTGT 59.127 61.111 0.00 0.00 44.06 3.41
6844 10917 1.842562 ACACTGCTCCTGCTCCATTAT 59.157 47.619 0.00 0.00 40.48 1.28
6845 10918 1.065926 CACACTGCTCCTGCTCCATTA 60.066 52.381 0.00 0.00 40.48 1.90
6846 10919 0.322277 CACACTGCTCCTGCTCCATT 60.322 55.000 0.00 0.00 40.48 3.16
6858 10931 0.394565 ACTCCAAGTCTCCACACTGC 59.605 55.000 0.00 0.00 0.00 4.40
6865 10938 1.216710 CGCTCCACTCCAAGTCTCC 59.783 63.158 0.00 0.00 0.00 3.71
6871 10944 0.108186 CTATGTGCGCTCCACTCCAA 60.108 55.000 9.73 0.00 44.92 3.53
6872 10945 1.517361 CTATGTGCGCTCCACTCCA 59.483 57.895 9.73 0.00 44.92 3.86
6873 10946 1.227380 CCTATGTGCGCTCCACTCC 60.227 63.158 9.73 0.00 44.92 3.85
6874 10947 0.807667 CACCTATGTGCGCTCCACTC 60.808 60.000 9.73 0.00 44.92 3.51
6875 10948 1.219124 CACCTATGTGCGCTCCACT 59.781 57.895 9.73 0.00 44.92 4.00
6876 10949 1.815421 CCACCTATGTGCGCTCCAC 60.815 63.158 9.73 0.00 44.90 4.02
6878 10951 0.249489 CTACCACCTATGTGCGCTCC 60.249 60.000 9.73 0.00 41.35 4.70
6879 10952 0.460311 ACTACCACCTATGTGCGCTC 59.540 55.000 9.73 5.51 41.35 5.03
6881 10954 1.006832 CAACTACCACCTATGTGCGC 58.993 55.000 0.00 0.00 41.35 6.09
6882 10955 1.006832 GCAACTACCACCTATGTGCG 58.993 55.000 0.00 0.00 41.35 5.34
6883 10956 1.379527 GGCAACTACCACCTATGTGC 58.620 55.000 0.00 0.00 41.35 4.57
6884 10957 1.742411 CGGGCAACTACCACCTATGTG 60.742 57.143 0.00 0.00 42.39 3.21
6910 11004 2.443016 CTCCTGGGGAGGGAGTCG 60.443 72.222 5.73 0.00 45.43 4.18
6927 11021 1.994779 CTGCCCACAATCGCATTTTTC 59.005 47.619 0.00 0.00 33.78 2.29
6949 11043 0.790814 GCTTTCACCGAGAGAAACCG 59.209 55.000 0.00 0.00 32.09 4.44
7051 11148 0.875728 CCACACCCGCGTATGAAAAA 59.124 50.000 13.20 0.00 0.00 1.94
7067 11171 3.310860 ATCCTTCCGTCGCCACCAC 62.311 63.158 0.00 0.00 0.00 4.16
7074 11178 0.530744 TTGTCCTCATCCTTCCGTCG 59.469 55.000 0.00 0.00 0.00 5.12
7076 11180 2.092914 GGAATTGTCCTCATCCTTCCGT 60.093 50.000 0.00 0.00 41.24 4.69
7099 11203 0.041312 CAAGACAACCTTGTTCGGCG 60.041 55.000 0.00 0.00 45.52 6.46
7109 11213 3.066760 CACTGGAGAAAACCAAGACAACC 59.933 47.826 0.00 0.00 39.59 3.77
7110 11214 3.489229 GCACTGGAGAAAACCAAGACAAC 60.489 47.826 0.00 0.00 39.59 3.32
7129 11233 1.071605 GTCGTCATGGTGAGAAGCAC 58.928 55.000 0.00 0.00 46.98 4.40
7134 11238 1.813178 GAGAGTGTCGTCATGGTGAGA 59.187 52.381 0.00 0.00 0.00 3.27
7138 11242 1.205655 CATGGAGAGTGTCGTCATGGT 59.794 52.381 0.00 0.00 32.37 3.55
7173 11277 1.320344 TGGGAAGACGAGACCATCCG 61.320 60.000 0.00 0.00 0.00 4.18
7174 11278 0.175989 GTGGGAAGACGAGACCATCC 59.824 60.000 0.00 0.00 35.13 3.51
7180 11284 1.975407 GGACGGTGGGAAGACGAGA 60.975 63.158 0.00 0.00 0.00 4.04
7210 11314 4.165180 GGAGAGGAAAAGAAGGCCTAATCT 59.835 45.833 5.16 2.53 30.70 2.40
7213 11317 3.256704 TGGAGAGGAAAAGAAGGCCTAA 58.743 45.455 5.16 0.00 30.70 2.69
7214 11318 2.915869 TGGAGAGGAAAAGAAGGCCTA 58.084 47.619 5.16 0.00 30.70 3.93
7215 11319 1.747444 TGGAGAGGAAAAGAAGGCCT 58.253 50.000 0.00 0.00 33.97 5.19
7216 11320 2.816777 ATGGAGAGGAAAAGAAGGCC 57.183 50.000 0.00 0.00 0.00 5.19
7217 11321 4.081972 GGAAAATGGAGAGGAAAAGAAGGC 60.082 45.833 0.00 0.00 0.00 4.35
7218 11322 4.156739 CGGAAAATGGAGAGGAAAAGAAGG 59.843 45.833 0.00 0.00 0.00 3.46
7219 11323 5.003804 TCGGAAAATGGAGAGGAAAAGAAG 58.996 41.667 0.00 0.00 0.00 2.85
7246 11357 2.591311 CCACAACCGTCGAACCACG 61.591 63.158 0.00 0.00 44.09 4.94
7250 11361 1.282930 GAGAGCCACAACCGTCGAAC 61.283 60.000 0.00 0.00 0.00 3.95
7279 11390 2.423898 ATCCCACAGACGTAGCCGG 61.424 63.158 0.00 0.00 38.78 6.13
7280 11391 1.226974 CATCCCACAGACGTAGCCG 60.227 63.158 0.00 0.00 40.83 5.52
7283 11394 1.226974 CCGCATCCCACAGACGTAG 60.227 63.158 0.00 0.00 0.00 3.51
7284 11395 2.889617 CCGCATCCCACAGACGTA 59.110 61.111 0.00 0.00 0.00 3.57
7285 11396 4.760047 GCCGCATCCCACAGACGT 62.760 66.667 0.00 0.00 0.00 4.34
7290 11401 4.652131 AAACCGCCGCATCCCACA 62.652 61.111 0.00 0.00 0.00 4.17
7291 11402 3.370231 AAAACCGCCGCATCCCAC 61.370 61.111 0.00 0.00 0.00 4.61
7292 11403 3.369400 CAAAACCGCCGCATCCCA 61.369 61.111 0.00 0.00 0.00 4.37
7293 11404 3.370231 ACAAAACCGCCGCATCCC 61.370 61.111 0.00 0.00 0.00 3.85
7301 11421 1.265905 CTAACCTGGACACAAAACCGC 59.734 52.381 0.00 0.00 0.00 5.68
7313 11433 2.301346 GAACATCCCATGCTAACCTGG 58.699 52.381 0.00 0.00 0.00 4.45
7324 11444 0.907704 ACTACGGCAGGAACATCCCA 60.908 55.000 0.00 0.00 37.19 4.37
7326 11446 0.462047 CCACTACGGCAGGAACATCC 60.462 60.000 0.00 0.00 36.58 3.51
7337 11457 0.744414 CAAGGGACATGCCACTACGG 60.744 60.000 8.20 0.00 38.95 4.02
7338 11458 0.036388 ACAAGGGACATGCCACTACG 60.036 55.000 8.20 0.00 38.95 3.51
7339 11459 3.007635 GTTACAAGGGACATGCCACTAC 58.992 50.000 8.20 0.00 38.95 2.73
7340 11460 2.354303 CGTTACAAGGGACATGCCACTA 60.354 50.000 8.20 0.00 38.95 2.74
7341 11461 1.610624 CGTTACAAGGGACATGCCACT 60.611 52.381 8.20 0.00 38.95 4.00
7342 11462 0.802494 CGTTACAAGGGACATGCCAC 59.198 55.000 8.20 0.00 38.95 5.01
7343 11463 0.322098 CCGTTACAAGGGACATGCCA 60.322 55.000 8.20 0.00 38.95 4.92
7344 11464 2.477880 CCGTTACAAGGGACATGCC 58.522 57.895 0.00 0.00 36.04 4.40
7352 11472 2.770232 AGGATCCTAACCCGTTACAAGG 59.230 50.000 14.27 0.00 0.00 3.61
7353 11473 4.482952 AAGGATCCTAACCCGTTACAAG 57.517 45.455 16.55 0.00 0.00 3.16
7354 11474 4.566070 CCAAAGGATCCTAACCCGTTACAA 60.566 45.833 16.55 0.00 0.00 2.41
7355 11475 3.054948 CCAAAGGATCCTAACCCGTTACA 60.055 47.826 16.55 0.00 0.00 2.41
7356 11476 3.054875 ACCAAAGGATCCTAACCCGTTAC 60.055 47.826 16.55 0.00 0.00 2.50
7357 11477 3.054948 CACCAAAGGATCCTAACCCGTTA 60.055 47.826 16.55 0.00 0.00 3.18
7358 11478 1.990327 ACCAAAGGATCCTAACCCGTT 59.010 47.619 16.55 0.77 0.00 4.44
7359 11479 1.280998 CACCAAAGGATCCTAACCCGT 59.719 52.381 16.55 4.40 0.00 5.28
7360 11480 1.280998 ACACCAAAGGATCCTAACCCG 59.719 52.381 16.55 6.78 0.00 5.28
7361 11481 3.684697 GCTACACCAAAGGATCCTAACCC 60.685 52.174 16.55 0.00 0.00 4.11
7362 11482 3.542648 GCTACACCAAAGGATCCTAACC 58.457 50.000 16.55 0.00 0.00 2.85
7363 11483 3.195661 CGCTACACCAAAGGATCCTAAC 58.804 50.000 16.55 0.00 0.00 2.34
7364 11484 2.835764 ACGCTACACCAAAGGATCCTAA 59.164 45.455 16.55 0.00 0.00 2.69
7365 11485 2.463752 ACGCTACACCAAAGGATCCTA 58.536 47.619 16.55 0.00 0.00 2.94
7366 11486 1.276622 ACGCTACACCAAAGGATCCT 58.723 50.000 9.02 9.02 0.00 3.24
7367 11487 2.973694 TACGCTACACCAAAGGATCC 57.026 50.000 2.48 2.48 0.00 3.36
7368 11488 4.054780 TGATACGCTACACCAAAGGATC 57.945 45.455 0.00 0.00 0.00 3.36
7369 11489 4.380531 CATGATACGCTACACCAAAGGAT 58.619 43.478 0.00 0.00 0.00 3.24
7370 11490 3.792401 CATGATACGCTACACCAAAGGA 58.208 45.455 0.00 0.00 0.00 3.36
7371 11491 2.287915 GCATGATACGCTACACCAAAGG 59.712 50.000 0.00 0.00 0.00 3.11
7372 11492 2.935849 TGCATGATACGCTACACCAAAG 59.064 45.455 0.00 0.00 0.00 2.77
7373 11493 2.935849 CTGCATGATACGCTACACCAAA 59.064 45.455 0.00 0.00 0.00 3.28
7374 11494 2.093711 ACTGCATGATACGCTACACCAA 60.094 45.455 0.00 0.00 0.00 3.67
7375 11495 1.480545 ACTGCATGATACGCTACACCA 59.519 47.619 0.00 0.00 0.00 4.17
7376 11496 2.225068 ACTGCATGATACGCTACACC 57.775 50.000 0.00 0.00 0.00 4.16
7377 11497 2.719556 CGTACTGCATGATACGCTACAC 59.280 50.000 11.03 0.00 37.91 2.90
7378 11498 2.614983 TCGTACTGCATGATACGCTACA 59.385 45.455 16.36 2.01 43.02 2.74
7379 11499 3.263602 TCGTACTGCATGATACGCTAC 57.736 47.619 16.36 0.00 43.02 3.58
7380 11500 3.500680 TGATCGTACTGCATGATACGCTA 59.499 43.478 16.36 5.30 43.02 4.26
7381 11501 2.293399 TGATCGTACTGCATGATACGCT 59.707 45.455 16.36 9.80 43.02 5.07
7382 11502 2.405357 GTGATCGTACTGCATGATACGC 59.595 50.000 16.36 7.71 43.02 4.42
7383 11503 3.665871 CAGTGATCGTACTGCATGATACG 59.334 47.826 15.46 15.46 44.34 3.06
7393 11513 4.278669 GGTCCATATGACAGTGATCGTACT 59.721 45.833 3.65 0.00 46.38 2.73
7394 11514 4.547532 GGTCCATATGACAGTGATCGTAC 58.452 47.826 3.65 0.00 46.38 3.67
7395 11515 3.572682 GGGTCCATATGACAGTGATCGTA 59.427 47.826 3.65 0.00 46.38 3.43
7396 11516 2.365617 GGGTCCATATGACAGTGATCGT 59.634 50.000 3.65 0.00 46.38 3.73
7397 11517 2.608016 CGGGTCCATATGACAGTGATCG 60.608 54.545 3.65 0.00 46.38 3.69
7398 11518 2.289072 CCGGGTCCATATGACAGTGATC 60.289 54.545 3.65 0.00 46.38 2.92
7399 11519 1.694150 CCGGGTCCATATGACAGTGAT 59.306 52.381 3.65 0.00 46.38 3.06
7400 11520 1.119684 CCGGGTCCATATGACAGTGA 58.880 55.000 3.65 0.00 46.38 3.41
7401 11521 0.830648 ACCGGGTCCATATGACAGTG 59.169 55.000 6.32 0.00 46.38 3.66
7402 11522 1.120530 GACCGGGTCCATATGACAGT 58.879 55.000 16.55 0.46 46.38 3.55
7403 11523 3.989104 GACCGGGTCCATATGACAG 57.011 57.895 16.55 0.00 46.38 3.51
7413 11533 1.376812 GACAACATGGGACCGGGTC 60.377 63.158 19.06 19.06 0.00 4.46
7414 11534 1.497309 ATGACAACATGGGACCGGGT 61.497 55.000 6.32 0.00 35.21 5.28
7415 11535 0.748005 GATGACAACATGGGACCGGG 60.748 60.000 6.32 0.00 36.82 5.73
7416 11536 0.748005 GGATGACAACATGGGACCGG 60.748 60.000 0.00 0.00 36.82 5.28
7417 11537 1.089481 CGGATGACAACATGGGACCG 61.089 60.000 0.00 0.00 36.82 4.79
7418 11538 1.376609 GCGGATGACAACATGGGACC 61.377 60.000 0.00 0.00 36.82 4.46
7419 11539 0.676466 TGCGGATGACAACATGGGAC 60.676 55.000 0.00 0.00 36.82 4.46
7420 11540 0.676466 GTGCGGATGACAACATGGGA 60.676 55.000 0.00 0.00 36.82 4.37
7421 11541 0.677731 AGTGCGGATGACAACATGGG 60.678 55.000 0.00 0.00 36.82 4.00
7422 11542 1.665679 GTAGTGCGGATGACAACATGG 59.334 52.381 0.00 0.00 36.82 3.66
7423 11543 2.345876 TGTAGTGCGGATGACAACATG 58.654 47.619 0.00 0.00 36.82 3.21
7424 11544 2.028112 ACTGTAGTGCGGATGACAACAT 60.028 45.455 0.00 0.00 39.67 2.71
7425 11545 1.343142 ACTGTAGTGCGGATGACAACA 59.657 47.619 0.00 0.00 0.00 3.33
7426 11546 2.080286 ACTGTAGTGCGGATGACAAC 57.920 50.000 0.00 0.00 0.00 3.32
7427 11547 3.226346 GTACTGTAGTGCGGATGACAA 57.774 47.619 0.00 0.00 0.00 3.18
7428 11548 2.933495 GTACTGTAGTGCGGATGACA 57.067 50.000 0.00 0.00 0.00 3.58
7436 11556 5.731599 AGTACTGTATCGTACTGTAGTGC 57.268 43.478 15.14 0.00 46.08 4.40
7444 11564 3.875727 TCCTCTGCAGTACTGTATCGTAC 59.124 47.826 23.44 6.13 39.97 3.67
7445 11565 4.146745 TCCTCTGCAGTACTGTATCGTA 57.853 45.455 23.44 4.11 0.00 3.43
7446 11566 3.000684 TCCTCTGCAGTACTGTATCGT 57.999 47.619 23.44 0.00 0.00 3.73
7447 11567 3.818210 AGATCCTCTGCAGTACTGTATCG 59.182 47.826 23.44 12.51 0.00 2.92
7448 11568 4.824537 TGAGATCCTCTGCAGTACTGTATC 59.175 45.833 23.44 13.08 0.00 2.24
7449 11569 4.797743 TGAGATCCTCTGCAGTACTGTAT 58.202 43.478 23.44 4.21 0.00 2.29
7450 11570 4.236527 TGAGATCCTCTGCAGTACTGTA 57.763 45.455 23.44 18.51 0.00 2.74
7451 11571 3.093057 TGAGATCCTCTGCAGTACTGT 57.907 47.619 23.44 2.01 0.00 3.55
7452 11572 3.430098 GGTTGAGATCCTCTGCAGTACTG 60.430 52.174 18.93 18.93 0.00 2.74
7453 11573 2.763448 GGTTGAGATCCTCTGCAGTACT 59.237 50.000 14.67 7.05 0.00 2.73
7454 11574 2.159028 GGGTTGAGATCCTCTGCAGTAC 60.159 54.545 14.67 2.25 0.00 2.73
7455 11575 2.111384 GGGTTGAGATCCTCTGCAGTA 58.889 52.381 14.67 0.81 0.00 2.74
7456 11576 0.908198 GGGTTGAGATCCTCTGCAGT 59.092 55.000 14.67 0.00 0.00 4.40
7457 11577 0.179936 GGGGTTGAGATCCTCTGCAG 59.820 60.000 7.63 7.63 0.00 4.41
7458 11578 1.274703 GGGGGTTGAGATCCTCTGCA 61.275 60.000 0.00 0.00 0.00 4.41
7459 11579 0.985490 AGGGGGTTGAGATCCTCTGC 60.985 60.000 0.00 0.00 31.52 4.26
7460 11580 1.589414 AAGGGGGTTGAGATCCTCTG 58.411 55.000 0.00 0.00 33.40 3.35
7461 11581 3.734344 ATAAGGGGGTTGAGATCCTCT 57.266 47.619 0.00 0.00 34.84 3.69
7462 11582 4.658901 TGTTATAAGGGGGTTGAGATCCTC 59.341 45.833 0.00 0.00 0.00 3.71
7463 11583 4.641868 TGTTATAAGGGGGTTGAGATCCT 58.358 43.478 0.00 0.00 0.00 3.24
7464 11584 5.073144 TCATGTTATAAGGGGGTTGAGATCC 59.927 44.000 0.00 0.00 0.00 3.36
7465 11585 6.187727 TCATGTTATAAGGGGGTTGAGATC 57.812 41.667 0.00 0.00 0.00 2.75
7466 11586 6.590656 TTCATGTTATAAGGGGGTTGAGAT 57.409 37.500 0.00 0.00 0.00 2.75
7467 11587 6.069088 ACATTCATGTTATAAGGGGGTTGAGA 60.069 38.462 0.00 0.00 37.90 3.27
7468 11588 6.129179 ACATTCATGTTATAAGGGGGTTGAG 58.871 40.000 0.00 0.00 37.90 3.02
7469 11589 6.086011 ACATTCATGTTATAAGGGGGTTGA 57.914 37.500 0.00 0.00 37.90 3.18
7489 11609 9.793259 TCCATGAAGAGTTTCTAAGTTAAACAT 57.207 29.630 0.00 0.00 38.92 2.71
7490 11610 9.273016 CTCCATGAAGAGTTTCTAAGTTAAACA 57.727 33.333 0.00 0.00 38.92 2.83
7491 11611 9.490379 TCTCCATGAAGAGTTTCTAAGTTAAAC 57.510 33.333 0.00 0.00 37.14 2.01
7493 11613 9.658799 CATCTCCATGAAGAGTTTCTAAGTTAA 57.341 33.333 0.00 0.00 35.28 2.01
7494 11614 8.260818 CCATCTCCATGAAGAGTTTCTAAGTTA 58.739 37.037 0.00 0.00 35.28 2.24
7495 11615 7.108847 CCATCTCCATGAAGAGTTTCTAAGTT 58.891 38.462 0.00 0.00 35.28 2.66
7496 11616 6.214412 ACCATCTCCATGAAGAGTTTCTAAGT 59.786 38.462 0.00 0.00 35.28 2.24
7497 11617 6.538021 CACCATCTCCATGAAGAGTTTCTAAG 59.462 42.308 0.00 0.00 35.28 2.18
7498 11618 6.013379 ACACCATCTCCATGAAGAGTTTCTAA 60.013 38.462 0.00 0.00 35.28 2.10
7499 11619 5.485353 ACACCATCTCCATGAAGAGTTTCTA 59.515 40.000 0.00 0.00 35.28 2.10
7500 11620 4.288105 ACACCATCTCCATGAAGAGTTTCT 59.712 41.667 0.00 0.00 35.28 2.52
7501 11621 4.583871 ACACCATCTCCATGAAGAGTTTC 58.416 43.478 0.00 0.00 35.28 2.78
7502 11622 4.647564 ACACCATCTCCATGAAGAGTTT 57.352 40.909 0.00 0.00 35.28 2.66
7503 11623 4.647564 AACACCATCTCCATGAAGAGTT 57.352 40.909 0.00 0.00 35.28 3.01
7504 11624 5.249393 ACTTAACACCATCTCCATGAAGAGT 59.751 40.000 0.00 0.00 35.28 3.24
7505 11625 5.583854 CACTTAACACCATCTCCATGAAGAG 59.416 44.000 0.00 0.00 35.04 2.85
7506 11626 5.013079 ACACTTAACACCATCTCCATGAAGA 59.987 40.000 0.00 0.00 30.57 2.87
7507 11627 5.248640 ACACTTAACACCATCTCCATGAAG 58.751 41.667 0.00 0.00 30.57 3.02
7508 11628 5.221823 TGACACTTAACACCATCTCCATGAA 60.222 40.000 0.00 0.00 30.57 2.57
7509 11629 4.285775 TGACACTTAACACCATCTCCATGA 59.714 41.667 0.00 0.00 30.57 3.07
7510 11630 4.393062 GTGACACTTAACACCATCTCCATG 59.607 45.833 0.00 0.00 0.00 3.66
7511 11631 4.579869 GTGACACTTAACACCATCTCCAT 58.420 43.478 0.00 0.00 0.00 3.41
7512 11632 3.554129 CGTGACACTTAACACCATCTCCA 60.554 47.826 3.68 0.00 34.05 3.86
7513 11633 2.993899 CGTGACACTTAACACCATCTCC 59.006 50.000 3.68 0.00 34.05 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.