Multiple sequence alignment - TraesCS3A01G115900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G115900 chr3A 100.000 3968 0 0 1 3968 83729413 83725446 0.000000e+00 7328
1 TraesCS3A01G115900 chr3A 90.123 162 16 0 1217 1378 457664602 457664441 1.120000e-50 211
2 TraesCS3A01G115900 chr3A 91.358 81 7 0 1920 2000 83727385 83727305 1.170000e-20 111
3 TraesCS3A01G115900 chr3A 91.358 81 7 0 2029 2109 83727494 83727414 1.170000e-20 111
4 TraesCS3A01G115900 chr3B 93.487 2610 94 32 693 3273 117557427 117554865 0.000000e+00 3808
5 TraesCS3A01G115900 chr3B 87.800 500 45 14 3472 3968 117554533 117554047 4.450000e-159 571
6 TraesCS3A01G115900 chr3B 90.741 162 15 0 1217 1378 445202332 445202493 2.400000e-52 217
7 TraesCS3A01G115900 chr3B 83.254 209 30 5 6 210 117572838 117572631 1.880000e-43 187
8 TraesCS3A01G115900 chr3B 78.966 290 39 12 208 494 117563838 117563568 1.130000e-40 178
9 TraesCS3A01G115900 chr3B 93.000 100 6 1 3523 3621 116193512 116193611 1.150000e-30 145
10 TraesCS3A01G115900 chr3D 94.870 1267 45 11 1987 3248 71498957 71497706 0.000000e+00 1962
11 TraesCS3A01G115900 chr3D 93.360 1265 46 16 698 1942 71500201 71498955 0.000000e+00 1836
12 TraesCS3A01G115900 chr3D 87.661 543 39 19 3435 3968 71497160 71496637 1.220000e-169 606
13 TraesCS3A01G115900 chr3D 89.595 173 18 0 1217 1389 346060172 346060344 1.860000e-53 220
14 TraesCS3A01G115900 chr3D 84.472 161 12 6 3272 3422 71497643 71497486 3.200000e-31 147
15 TraesCS3A01G115900 chr6B 100.000 80 0 0 3536 3615 35636340 35636261 8.880000e-32 148
16 TraesCS3A01G115900 chr1D 100.000 80 0 0 3537 3616 478271243 478271322 8.880000e-32 148
17 TraesCS3A01G115900 chr1A 100.000 79 0 0 3537 3615 256826500 256826578 3.200000e-31 147
18 TraesCS3A01G115900 chr4D 97.647 85 1 1 3539 3622 334968071 334968155 1.150000e-30 145
19 TraesCS3A01G115900 chr6D 94.444 90 3 2 3527 3614 23621789 23621878 1.920000e-28 137
20 TraesCS3A01G115900 chr4B 92.079 101 2 5 3537 3632 9700502 9700403 1.920000e-28 137


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G115900 chr3A 83725446 83729413 3967 True 2516.666667 7328 94.238667 1 3968 3 chr3A.!!$R2 3967
1 TraesCS3A01G115900 chr3B 117554047 117557427 3380 True 2189.500000 3808 90.643500 693 3968 2 chr3B.!!$R3 3275
2 TraesCS3A01G115900 chr3D 71496637 71500201 3564 True 1137.750000 1962 90.090750 698 3968 4 chr3D.!!$R1 3270


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
100 101 0.034863 GCCCAAGGGGTCGATGTTTA 60.035 55.000 7.36 0.00 46.51 2.01 F
670 671 0.036765 GCGGTGTTCATGGGTGAGTA 60.037 55.000 0.00 0.00 35.39 2.59 F
876 879 0.106217 CGGCCATTCCAACCCCTAAT 60.106 55.000 2.24 0.00 34.01 1.73 F
884 887 1.203583 TCCAACCCCTAATACCCCACA 60.204 52.381 0.00 0.00 0.00 4.17 F
888 891 1.300927 CCCCTAATACCCCACACCAA 58.699 55.000 0.00 0.00 0.00 3.67 F
2333 2365 1.374252 ACCGCACGTGATGGACTTC 60.374 57.895 27.68 5.04 0.00 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1943 1974 0.105039 GCAACCAGGCGCTAGTCTAT 59.895 55.000 7.64 0.00 0.00 1.98 R
2256 2288 0.515127 TTCGCAATGTCGAACGCAAT 59.485 45.000 8.05 0.00 42.68 3.56 R
2462 2494 3.118112 AGAAATCTCCGCTGTTCATCCAT 60.118 43.478 0.00 0.00 0.00 3.41 R
2829 2861 3.381908 GCAGAGATAGAGGAAGAACCGAA 59.618 47.826 0.00 0.00 44.74 4.30 R
2956 2988 1.028330 CCGCATGATCAGCTGGTTGT 61.028 55.000 15.13 0.00 0.00 3.32 R
3465 3878 0.392193 ATTTCGAGCTGAGGCCACAG 60.392 55.000 24.36 24.36 39.73 3.66 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.992476 ATGCCGGGCTATAGGGTAG 58.008 57.895 21.46 0.00 0.00 3.18
19 20 1.265454 ATGCCGGGCTATAGGGTAGC 61.265 60.000 21.46 0.00 39.70 3.58
20 21 1.609794 GCCGGGCTATAGGGTAGCT 60.610 63.158 12.87 0.00 40.25 3.32
21 22 1.605971 GCCGGGCTATAGGGTAGCTC 61.606 65.000 12.87 2.21 40.25 4.09
22 23 0.251653 CCGGGCTATAGGGTAGCTCA 60.252 60.000 7.61 0.00 40.95 4.26
23 24 1.178276 CGGGCTATAGGGTAGCTCAG 58.822 60.000 7.61 0.00 40.95 3.35
24 25 0.899019 GGGCTATAGGGTAGCTCAGC 59.101 60.000 1.04 0.00 40.62 4.26
25 26 0.528470 GGCTATAGGGTAGCTCAGCG 59.472 60.000 1.04 0.00 40.25 5.18
26 27 1.249407 GCTATAGGGTAGCTCAGCGT 58.751 55.000 1.04 0.00 37.56 5.07
27 28 1.068194 GCTATAGGGTAGCTCAGCGTG 60.068 57.143 1.04 0.00 37.56 5.34
28 29 0.959553 TATAGGGTAGCTCAGCGTGC 59.040 55.000 0.00 0.00 0.00 5.34
29 30 1.043116 ATAGGGTAGCTCAGCGTGCA 61.043 55.000 0.00 0.00 0.00 4.57
30 31 1.254975 TAGGGTAGCTCAGCGTGCAA 61.255 55.000 0.00 0.00 0.00 4.08
31 32 2.391389 GGGTAGCTCAGCGTGCAAC 61.391 63.158 0.00 0.00 0.00 4.17
32 33 1.667830 GGTAGCTCAGCGTGCAACA 60.668 57.895 0.00 0.00 35.74 3.33
33 34 1.021390 GGTAGCTCAGCGTGCAACAT 61.021 55.000 0.00 0.00 35.74 2.71
34 35 1.640428 GTAGCTCAGCGTGCAACATA 58.360 50.000 0.00 0.00 35.74 2.29
35 36 2.205074 GTAGCTCAGCGTGCAACATAT 58.795 47.619 0.00 0.00 35.74 1.78
36 37 1.293924 AGCTCAGCGTGCAACATATC 58.706 50.000 0.00 0.00 35.74 1.63
37 38 1.134580 AGCTCAGCGTGCAACATATCT 60.135 47.619 0.00 0.00 35.74 1.98
38 39 2.101415 AGCTCAGCGTGCAACATATCTA 59.899 45.455 0.00 0.00 35.74 1.98
39 40 2.474359 GCTCAGCGTGCAACATATCTAG 59.526 50.000 0.00 0.00 35.74 2.43
40 41 3.055591 CTCAGCGTGCAACATATCTAGG 58.944 50.000 0.00 0.00 35.74 3.02
41 42 2.430694 TCAGCGTGCAACATATCTAGGT 59.569 45.455 0.00 0.00 35.74 3.08
42 43 2.797156 CAGCGTGCAACATATCTAGGTC 59.203 50.000 0.00 0.00 35.74 3.85
43 44 2.135933 GCGTGCAACATATCTAGGTCC 58.864 52.381 0.00 0.00 35.74 4.46
44 45 2.755650 CGTGCAACATATCTAGGTCCC 58.244 52.381 0.00 0.00 35.74 4.46
45 46 2.102420 CGTGCAACATATCTAGGTCCCA 59.898 50.000 0.00 0.00 35.74 4.37
46 47 3.431626 CGTGCAACATATCTAGGTCCCAA 60.432 47.826 0.00 0.00 35.74 4.12
47 48 4.718961 GTGCAACATATCTAGGTCCCAAT 58.281 43.478 0.00 0.00 36.32 3.16
48 49 4.516698 GTGCAACATATCTAGGTCCCAATG 59.483 45.833 0.00 0.00 36.32 2.82
49 50 4.165950 TGCAACATATCTAGGTCCCAATGT 59.834 41.667 0.00 0.00 0.00 2.71
50 51 5.133221 GCAACATATCTAGGTCCCAATGTT 58.867 41.667 0.00 0.00 37.89 2.71
51 52 5.594317 GCAACATATCTAGGTCCCAATGTTT 59.406 40.000 0.02 0.00 35.87 2.83
52 53 6.770785 GCAACATATCTAGGTCCCAATGTTTA 59.229 38.462 0.02 0.00 35.87 2.01
53 54 7.284489 GCAACATATCTAGGTCCCAATGTTTAA 59.716 37.037 0.02 0.00 35.87 1.52
54 55 8.621286 CAACATATCTAGGTCCCAATGTTTAAC 58.379 37.037 0.02 0.00 35.87 2.01
55 56 8.102484 ACATATCTAGGTCCCAATGTTTAACT 57.898 34.615 0.00 0.00 0.00 2.24
56 57 8.211629 ACATATCTAGGTCCCAATGTTTAACTC 58.788 37.037 0.00 0.00 0.00 3.01
57 58 6.893020 ATCTAGGTCCCAATGTTTAACTCT 57.107 37.500 0.00 0.00 0.00 3.24
58 59 7.989947 ATCTAGGTCCCAATGTTTAACTCTA 57.010 36.000 0.00 0.00 0.00 2.43
59 60 7.989947 TCTAGGTCCCAATGTTTAACTCTAT 57.010 36.000 0.00 0.00 0.00 1.98
60 61 8.388656 TCTAGGTCCCAATGTTTAACTCTATT 57.611 34.615 0.00 0.00 0.00 1.73
61 62 8.265055 TCTAGGTCCCAATGTTTAACTCTATTG 58.735 37.037 0.00 0.00 0.00 1.90
62 63 6.187682 AGGTCCCAATGTTTAACTCTATTGG 58.812 40.000 14.86 14.86 45.73 3.16
63 64 5.949952 GGTCCCAATGTTTAACTCTATTGGT 59.050 40.000 18.23 0.00 45.05 3.67
64 65 6.127730 GGTCCCAATGTTTAACTCTATTGGTG 60.128 42.308 18.23 12.50 45.05 4.17
65 66 5.949354 TCCCAATGTTTAACTCTATTGGTGG 59.051 40.000 18.23 8.95 45.05 4.61
66 67 5.714806 CCCAATGTTTAACTCTATTGGTGGT 59.285 40.000 18.23 0.00 45.05 4.16
67 68 6.887545 CCCAATGTTTAACTCTATTGGTGGTA 59.112 38.462 18.23 0.00 45.05 3.25
68 69 7.067008 CCCAATGTTTAACTCTATTGGTGGTAG 59.933 40.741 18.23 5.35 45.05 3.18
69 70 7.610305 CCAATGTTTAACTCTATTGGTGGTAGT 59.390 37.037 14.02 0.00 42.78 2.73
70 71 8.450964 CAATGTTTAACTCTATTGGTGGTAGTG 58.549 37.037 0.00 0.00 0.00 2.74
71 72 7.305813 TGTTTAACTCTATTGGTGGTAGTGA 57.694 36.000 0.00 0.00 0.00 3.41
72 73 7.913789 TGTTTAACTCTATTGGTGGTAGTGAT 58.086 34.615 0.00 0.00 0.00 3.06
73 74 7.822334 TGTTTAACTCTATTGGTGGTAGTGATG 59.178 37.037 0.00 0.00 0.00 3.07
74 75 7.727578 TTAACTCTATTGGTGGTAGTGATGA 57.272 36.000 0.00 0.00 0.00 2.92
75 76 6.814954 AACTCTATTGGTGGTAGTGATGAT 57.185 37.500 0.00 0.00 0.00 2.45
76 77 6.814954 ACTCTATTGGTGGTAGTGATGATT 57.185 37.500 0.00 0.00 0.00 2.57
77 78 6.586344 ACTCTATTGGTGGTAGTGATGATTG 58.414 40.000 0.00 0.00 0.00 2.67
78 79 6.384015 ACTCTATTGGTGGTAGTGATGATTGA 59.616 38.462 0.00 0.00 0.00 2.57
79 80 7.071698 ACTCTATTGGTGGTAGTGATGATTGAT 59.928 37.037 0.00 0.00 0.00 2.57
80 81 7.219322 TCTATTGGTGGTAGTGATGATTGATG 58.781 38.462 0.00 0.00 0.00 3.07
81 82 4.155063 TGGTGGTAGTGATGATTGATGG 57.845 45.455 0.00 0.00 0.00 3.51
82 83 2.880890 GGTGGTAGTGATGATTGATGGC 59.119 50.000 0.00 0.00 0.00 4.40
83 84 2.880890 GTGGTAGTGATGATTGATGGCC 59.119 50.000 0.00 0.00 0.00 5.36
84 85 2.158623 TGGTAGTGATGATTGATGGCCC 60.159 50.000 0.00 0.00 0.00 5.80
85 86 2.158623 GGTAGTGATGATTGATGGCCCA 60.159 50.000 0.00 0.00 0.00 5.36
86 87 2.832643 AGTGATGATTGATGGCCCAA 57.167 45.000 0.00 0.00 0.00 4.12
87 88 2.662866 AGTGATGATTGATGGCCCAAG 58.337 47.619 0.00 0.00 0.00 3.61
88 89 1.684983 GTGATGATTGATGGCCCAAGG 59.315 52.381 0.00 0.00 0.00 3.61
89 90 1.335145 GATGATTGATGGCCCAAGGG 58.665 55.000 0.00 0.00 38.57 3.95
91 92 1.311059 GATTGATGGCCCAAGGGGT 59.689 57.895 7.36 0.00 46.51 4.95
97 98 3.728373 GGCCCAAGGGGTCGATGT 61.728 66.667 7.36 0.00 46.51 3.06
98 99 2.355115 GCCCAAGGGGTCGATGTT 59.645 61.111 7.36 0.00 46.51 2.71
99 100 1.304134 GCCCAAGGGGTCGATGTTT 60.304 57.895 7.36 0.00 46.51 2.83
100 101 0.034863 GCCCAAGGGGTCGATGTTTA 60.035 55.000 7.36 0.00 46.51 2.01
101 102 1.409661 GCCCAAGGGGTCGATGTTTAT 60.410 52.381 7.36 0.00 46.51 1.40
102 103 2.948600 GCCCAAGGGGTCGATGTTTATT 60.949 50.000 7.36 0.00 46.51 1.40
103 104 2.949644 CCCAAGGGGTCGATGTTTATTC 59.050 50.000 0.00 0.00 38.25 1.75
104 105 2.612212 CCAAGGGGTCGATGTTTATTCG 59.388 50.000 0.00 0.00 37.94 3.34
105 106 2.612212 CAAGGGGTCGATGTTTATTCGG 59.388 50.000 0.00 0.00 37.22 4.30
106 107 0.942252 GGGGTCGATGTTTATTCGGC 59.058 55.000 0.00 0.00 40.35 5.54
107 108 0.580104 GGGTCGATGTTTATTCGGCG 59.420 55.000 0.00 0.00 41.93 6.46
108 109 0.580104 GGTCGATGTTTATTCGGCGG 59.420 55.000 7.21 0.00 41.93 6.13
109 110 0.580104 GTCGATGTTTATTCGGCGGG 59.420 55.000 7.21 0.00 37.22 6.13
110 111 0.460722 TCGATGTTTATTCGGCGGGA 59.539 50.000 7.21 0.00 37.22 5.14
111 112 0.859232 CGATGTTTATTCGGCGGGAG 59.141 55.000 7.21 0.00 33.05 4.30
112 113 1.537348 CGATGTTTATTCGGCGGGAGA 60.537 52.381 7.21 0.00 33.05 3.71
113 114 2.767505 GATGTTTATTCGGCGGGAGAT 58.232 47.619 7.21 0.00 0.00 2.75
114 115 1.948104 TGTTTATTCGGCGGGAGATG 58.052 50.000 7.21 0.00 0.00 2.90
115 116 1.226746 GTTTATTCGGCGGGAGATGG 58.773 55.000 7.21 0.00 0.00 3.51
116 117 0.834612 TTTATTCGGCGGGAGATGGT 59.165 50.000 7.21 0.00 0.00 3.55
117 118 0.105964 TTATTCGGCGGGAGATGGTG 59.894 55.000 7.21 0.00 0.00 4.17
118 119 1.754380 TATTCGGCGGGAGATGGTGG 61.754 60.000 7.21 0.00 0.00 4.61
120 121 4.838152 CGGCGGGAGATGGTGGTG 62.838 72.222 0.00 0.00 0.00 4.17
121 122 4.489771 GGCGGGAGATGGTGGTGG 62.490 72.222 0.00 0.00 0.00 4.61
122 123 3.717294 GCGGGAGATGGTGGTGGT 61.717 66.667 0.00 0.00 0.00 4.16
123 124 2.268920 CGGGAGATGGTGGTGGTG 59.731 66.667 0.00 0.00 0.00 4.17
124 125 2.677228 GGGAGATGGTGGTGGTGG 59.323 66.667 0.00 0.00 0.00 4.61
125 126 2.231380 GGGAGATGGTGGTGGTGGT 61.231 63.158 0.00 0.00 0.00 4.16
126 127 1.299976 GGAGATGGTGGTGGTGGTC 59.700 63.158 0.00 0.00 0.00 4.02
127 128 1.079127 GAGATGGTGGTGGTGGTCG 60.079 63.158 0.00 0.00 0.00 4.79
128 129 1.827399 GAGATGGTGGTGGTGGTCGT 61.827 60.000 0.00 0.00 0.00 4.34
129 130 0.543410 AGATGGTGGTGGTGGTCGTA 60.543 55.000 0.00 0.00 0.00 3.43
130 131 0.539986 GATGGTGGTGGTGGTCGTAT 59.460 55.000 0.00 0.00 0.00 3.06
131 132 0.539986 ATGGTGGTGGTGGTCGTATC 59.460 55.000 0.00 0.00 0.00 2.24
132 133 0.543410 TGGTGGTGGTGGTCGTATCT 60.543 55.000 0.00 0.00 0.00 1.98
133 134 1.272592 TGGTGGTGGTGGTCGTATCTA 60.273 52.381 0.00 0.00 0.00 1.98
134 135 1.826720 GGTGGTGGTGGTCGTATCTAA 59.173 52.381 0.00 0.00 0.00 2.10
135 136 2.417787 GGTGGTGGTGGTCGTATCTAAC 60.418 54.545 0.00 0.00 0.00 2.34
136 137 2.494870 GTGGTGGTGGTCGTATCTAACT 59.505 50.000 0.00 0.00 0.00 2.24
137 138 3.056322 GTGGTGGTGGTCGTATCTAACTT 60.056 47.826 0.00 0.00 0.00 2.66
138 139 3.056393 TGGTGGTGGTCGTATCTAACTTG 60.056 47.826 0.00 0.00 0.00 3.16
139 140 3.056322 GGTGGTGGTCGTATCTAACTTGT 60.056 47.826 0.00 0.00 0.00 3.16
140 141 4.171754 GTGGTGGTCGTATCTAACTTGTC 58.828 47.826 0.00 0.00 0.00 3.18
141 142 3.194116 TGGTGGTCGTATCTAACTTGTCC 59.806 47.826 0.00 0.00 0.00 4.02
142 143 3.429960 GGTGGTCGTATCTAACTTGTCCC 60.430 52.174 0.00 0.00 0.00 4.46
143 144 3.446516 GTGGTCGTATCTAACTTGTCCCT 59.553 47.826 0.00 0.00 0.00 4.20
144 145 3.446161 TGGTCGTATCTAACTTGTCCCTG 59.554 47.826 0.00 0.00 0.00 4.45
145 146 3.446516 GGTCGTATCTAACTTGTCCCTGT 59.553 47.826 0.00 0.00 0.00 4.00
146 147 4.439837 GGTCGTATCTAACTTGTCCCTGTC 60.440 50.000 0.00 0.00 0.00 3.51
147 148 4.157289 GTCGTATCTAACTTGTCCCTGTCA 59.843 45.833 0.00 0.00 0.00 3.58
148 149 4.954202 TCGTATCTAACTTGTCCCTGTCAT 59.046 41.667 0.00 0.00 0.00 3.06
149 150 5.067413 TCGTATCTAACTTGTCCCTGTCATC 59.933 44.000 0.00 0.00 0.00 2.92
150 151 5.163550 CGTATCTAACTTGTCCCTGTCATCA 60.164 44.000 0.00 0.00 0.00 3.07
151 152 4.537135 TCTAACTTGTCCCTGTCATCAC 57.463 45.455 0.00 0.00 0.00 3.06
152 153 3.901222 TCTAACTTGTCCCTGTCATCACA 59.099 43.478 0.00 0.00 0.00 3.58
153 154 3.576078 AACTTGTCCCTGTCATCACAA 57.424 42.857 0.00 0.00 29.82 3.33
155 156 1.808945 CTTGTCCCTGTCATCACAAGC 59.191 52.381 0.00 0.00 39.37 4.01
156 157 0.320683 TGTCCCTGTCATCACAAGCG 60.321 55.000 0.00 0.00 29.82 4.68
157 158 1.021390 GTCCCTGTCATCACAAGCGG 61.021 60.000 0.00 0.00 29.82 5.52
158 159 1.746615 CCCTGTCATCACAAGCGGG 60.747 63.158 0.00 0.00 31.02 6.13
159 160 1.003355 CCTGTCATCACAAGCGGGT 60.003 57.895 0.00 0.00 29.82 5.28
160 161 1.300971 CCTGTCATCACAAGCGGGTG 61.301 60.000 4.63 4.63 40.16 4.61
161 162 1.300971 CTGTCATCACAAGCGGGTGG 61.301 60.000 10.29 0.00 39.27 4.61
162 163 1.302511 GTCATCACAAGCGGGTGGT 60.303 57.895 10.29 1.13 39.27 4.16
163 164 0.889186 GTCATCACAAGCGGGTGGTT 60.889 55.000 10.29 0.00 39.27 3.67
164 165 0.687920 TCATCACAAGCGGGTGGTTA 59.312 50.000 10.29 0.00 39.27 2.85
165 166 1.086696 CATCACAAGCGGGTGGTTAG 58.913 55.000 10.29 0.00 39.27 2.34
166 167 0.676782 ATCACAAGCGGGTGGTTAGC 60.677 55.000 10.29 0.00 39.27 3.09
167 168 2.358247 ACAAGCGGGTGGTTAGCG 60.358 61.111 0.00 0.00 33.70 4.26
168 169 2.047655 CAAGCGGGTGGTTAGCGA 60.048 61.111 0.00 0.00 33.70 4.93
169 170 1.449601 CAAGCGGGTGGTTAGCGAT 60.450 57.895 0.00 0.00 33.70 4.58
170 171 1.449601 AAGCGGGTGGTTAGCGATG 60.450 57.895 0.00 0.00 33.14 3.84
171 172 3.573491 GCGGGTGGTTAGCGATGC 61.573 66.667 0.00 0.00 0.00 3.91
172 173 2.125310 CGGGTGGTTAGCGATGCA 60.125 61.111 0.00 0.00 0.00 3.96
173 174 1.523711 CGGGTGGTTAGCGATGCAT 60.524 57.895 0.00 0.00 0.00 3.96
174 175 0.249699 CGGGTGGTTAGCGATGCATA 60.250 55.000 0.00 0.00 0.00 3.14
175 176 1.512926 GGGTGGTTAGCGATGCATAG 58.487 55.000 0.00 0.00 0.00 2.23
176 177 1.202651 GGGTGGTTAGCGATGCATAGT 60.203 52.381 8.67 0.00 0.00 2.12
177 178 2.135933 GGTGGTTAGCGATGCATAGTC 58.864 52.381 8.67 1.37 0.00 2.59
178 179 1.787155 GTGGTTAGCGATGCATAGTCG 59.213 52.381 8.67 6.25 41.77 4.18
179 180 1.679153 TGGTTAGCGATGCATAGTCGA 59.321 47.619 12.18 0.00 41.40 4.20
180 181 2.287608 TGGTTAGCGATGCATAGTCGAG 60.288 50.000 12.18 0.00 41.40 4.04
181 182 2.287668 GGTTAGCGATGCATAGTCGAGT 60.288 50.000 12.18 0.00 41.40 4.18
182 183 2.688364 TAGCGATGCATAGTCGAGTG 57.312 50.000 12.18 0.00 41.40 3.51
183 184 1.025041 AGCGATGCATAGTCGAGTGA 58.975 50.000 12.18 0.00 41.40 3.41
184 185 1.405463 AGCGATGCATAGTCGAGTGAA 59.595 47.619 12.18 0.00 41.40 3.18
185 186 2.159240 AGCGATGCATAGTCGAGTGAAA 60.159 45.455 12.18 0.00 41.40 2.69
186 187 2.603110 GCGATGCATAGTCGAGTGAAAA 59.397 45.455 12.18 0.00 41.40 2.29
187 188 3.542291 GCGATGCATAGTCGAGTGAAAAC 60.542 47.826 12.18 0.00 41.40 2.43
188 189 3.000322 CGATGCATAGTCGAGTGAAAACC 60.000 47.826 0.00 0.00 41.40 3.27
189 190 3.678056 TGCATAGTCGAGTGAAAACCT 57.322 42.857 2.10 0.00 0.00 3.50
190 191 4.002906 TGCATAGTCGAGTGAAAACCTT 57.997 40.909 2.10 0.00 0.00 3.50
191 192 3.745975 TGCATAGTCGAGTGAAAACCTTG 59.254 43.478 2.10 0.00 0.00 3.61
192 193 3.424962 GCATAGTCGAGTGAAAACCTTGC 60.425 47.826 2.10 0.00 0.00 4.01
193 194 1.594331 AGTCGAGTGAAAACCTTGCC 58.406 50.000 0.00 0.00 0.00 4.52
194 195 1.141053 AGTCGAGTGAAAACCTTGCCT 59.859 47.619 0.00 0.00 0.00 4.75
195 196 1.531578 GTCGAGTGAAAACCTTGCCTC 59.468 52.381 0.00 0.00 0.00 4.70
196 197 0.875059 CGAGTGAAAACCTTGCCTCC 59.125 55.000 0.00 0.00 0.00 4.30
197 198 1.813862 CGAGTGAAAACCTTGCCTCCA 60.814 52.381 0.00 0.00 0.00 3.86
198 199 2.306847 GAGTGAAAACCTTGCCTCCAA 58.693 47.619 0.00 0.00 0.00 3.53
199 200 2.893489 GAGTGAAAACCTTGCCTCCAAT 59.107 45.455 0.00 0.00 0.00 3.16
200 201 3.308401 AGTGAAAACCTTGCCTCCAATT 58.692 40.909 0.00 0.00 0.00 2.32
201 202 3.070015 AGTGAAAACCTTGCCTCCAATTG 59.930 43.478 0.00 0.00 0.00 2.32
202 203 3.069443 GTGAAAACCTTGCCTCCAATTGA 59.931 43.478 7.12 0.00 0.00 2.57
203 204 3.903090 TGAAAACCTTGCCTCCAATTGAT 59.097 39.130 7.12 0.00 0.00 2.57
204 205 3.967332 AAACCTTGCCTCCAATTGATG 57.033 42.857 7.12 0.00 0.00 3.07
214 215 1.563111 CCAATTGATGGCAATGACGC 58.437 50.000 7.12 0.00 43.71 5.19
222 223 4.559502 GCAATGACGCCCATAGGT 57.440 55.556 0.00 0.00 34.45 3.08
254 255 4.533919 TTTTTGAATGCATCGTTGGGAT 57.466 36.364 0.00 0.00 35.09 3.85
255 256 3.781079 TTTGAATGCATCGTTGGGATC 57.219 42.857 0.00 0.00 31.28 3.36
256 257 2.715749 TGAATGCATCGTTGGGATCT 57.284 45.000 0.00 0.00 31.28 2.75
257 258 3.003394 TGAATGCATCGTTGGGATCTT 57.997 42.857 0.00 0.00 31.28 2.40
258 259 4.149511 TGAATGCATCGTTGGGATCTTA 57.850 40.909 0.00 0.00 31.28 2.10
259 260 4.129380 TGAATGCATCGTTGGGATCTTAG 58.871 43.478 0.00 0.00 31.28 2.18
260 261 4.141733 TGAATGCATCGTTGGGATCTTAGA 60.142 41.667 0.00 0.00 31.28 2.10
261 262 3.904800 TGCATCGTTGGGATCTTAGAA 57.095 42.857 0.00 0.00 31.28 2.10
262 263 3.531538 TGCATCGTTGGGATCTTAGAAC 58.468 45.455 0.00 0.00 31.28 3.01
263 264 3.055458 TGCATCGTTGGGATCTTAGAACA 60.055 43.478 0.00 0.00 31.28 3.18
264 265 3.938963 GCATCGTTGGGATCTTAGAACAA 59.061 43.478 0.00 0.00 31.28 2.83
265 266 4.034510 GCATCGTTGGGATCTTAGAACAAG 59.965 45.833 0.00 0.00 31.28 3.16
266 267 4.202245 TCGTTGGGATCTTAGAACAAGG 57.798 45.455 9.46 9.46 0.00 3.61
267 268 3.581332 TCGTTGGGATCTTAGAACAAGGT 59.419 43.478 13.01 0.00 0.00 3.50
268 269 4.041198 TCGTTGGGATCTTAGAACAAGGTT 59.959 41.667 13.01 0.00 0.00 3.50
269 270 5.246656 TCGTTGGGATCTTAGAACAAGGTTA 59.753 40.000 13.01 0.00 0.00 2.85
270 271 5.935789 CGTTGGGATCTTAGAACAAGGTTAA 59.064 40.000 0.00 0.00 0.00 2.01
271 272 6.598064 CGTTGGGATCTTAGAACAAGGTTAAT 59.402 38.462 0.00 0.00 0.00 1.40
272 273 7.767198 CGTTGGGATCTTAGAACAAGGTTAATA 59.233 37.037 0.00 0.00 0.00 0.98
273 274 9.110502 GTTGGGATCTTAGAACAAGGTTAATAG 57.889 37.037 0.00 0.00 0.00 1.73
274 275 8.388656 TGGGATCTTAGAACAAGGTTAATAGT 57.611 34.615 0.00 0.00 0.00 2.12
275 276 9.496710 TGGGATCTTAGAACAAGGTTAATAGTA 57.503 33.333 0.00 0.00 0.00 1.82
303 304 9.654663 AGATAATAACCGGCTAATGAAGTTATC 57.345 33.333 0.00 3.59 33.62 1.75
304 305 9.431887 GATAATAACCGGCTAATGAAGTTATCA 57.568 33.333 0.00 0.00 43.67 2.15
329 330 9.875691 CATGTTACTTATAGCCATATTAGCTCA 57.124 33.333 0.00 0.00 41.83 4.26
383 384 8.634444 TGTTATTATGTTATTAATGTGTGGGCC 58.366 33.333 0.00 0.00 0.00 5.80
384 385 8.634444 GTTATTATGTTATTAATGTGTGGGCCA 58.366 33.333 0.00 0.00 0.00 5.36
385 386 7.854166 ATTATGTTATTAATGTGTGGGCCAT 57.146 32.000 10.70 0.00 0.00 4.40
386 387 5.789643 ATGTTATTAATGTGTGGGCCATC 57.210 39.130 10.70 7.15 0.00 3.51
387 388 4.865905 TGTTATTAATGTGTGGGCCATCT 58.134 39.130 10.70 0.00 0.00 2.90
388 389 5.268387 TGTTATTAATGTGTGGGCCATCTT 58.732 37.500 10.70 3.75 0.00 2.40
389 390 5.719085 TGTTATTAATGTGTGGGCCATCTTT 59.281 36.000 10.70 12.87 0.00 2.52
390 391 6.212388 TGTTATTAATGTGTGGGCCATCTTTT 59.788 34.615 10.70 4.71 0.00 2.27
391 392 5.760484 ATTAATGTGTGGGCCATCTTTTT 57.240 34.783 10.70 3.18 0.00 1.94
392 393 3.683365 AATGTGTGGGCCATCTTTTTC 57.317 42.857 10.70 0.00 0.00 2.29
393 394 2.380064 TGTGTGGGCCATCTTTTTCT 57.620 45.000 10.70 0.00 0.00 2.52
394 395 2.238521 TGTGTGGGCCATCTTTTTCTC 58.761 47.619 10.70 0.00 0.00 2.87
395 396 2.158475 TGTGTGGGCCATCTTTTTCTCT 60.158 45.455 10.70 0.00 0.00 3.10
396 397 2.489722 GTGTGGGCCATCTTTTTCTCTC 59.510 50.000 10.70 0.00 0.00 3.20
397 398 2.108075 TGTGGGCCATCTTTTTCTCTCA 59.892 45.455 10.70 0.00 0.00 3.27
398 399 3.245371 TGTGGGCCATCTTTTTCTCTCAT 60.245 43.478 10.70 0.00 0.00 2.90
399 400 4.018506 TGTGGGCCATCTTTTTCTCTCATA 60.019 41.667 10.70 0.00 0.00 2.15
400 401 4.949856 GTGGGCCATCTTTTTCTCTCATAA 59.050 41.667 10.70 0.00 0.00 1.90
401 402 5.067023 GTGGGCCATCTTTTTCTCTCATAAG 59.933 44.000 10.70 0.00 0.00 1.73
402 403 4.582240 GGGCCATCTTTTTCTCTCATAAGG 59.418 45.833 4.39 0.00 0.00 2.69
403 404 4.582240 GGCCATCTTTTTCTCTCATAAGGG 59.418 45.833 0.00 0.00 0.00 3.95
404 405 5.440610 GCCATCTTTTTCTCTCATAAGGGA 58.559 41.667 0.00 0.00 0.00 4.20
405 406 6.067350 GCCATCTTTTTCTCTCATAAGGGAT 58.933 40.000 0.00 0.00 30.10 3.85
406 407 6.016443 GCCATCTTTTTCTCTCATAAGGGATG 60.016 42.308 0.00 0.00 30.10 3.51
407 408 6.016443 CCATCTTTTTCTCTCATAAGGGATGC 60.016 42.308 0.00 0.00 35.29 3.91
408 409 6.319048 TCTTTTTCTCTCATAAGGGATGCT 57.681 37.500 0.00 0.00 35.29 3.79
409 410 7.437713 TCTTTTTCTCTCATAAGGGATGCTA 57.562 36.000 0.00 0.00 35.29 3.49
410 411 7.504403 TCTTTTTCTCTCATAAGGGATGCTAG 58.496 38.462 0.00 0.00 35.29 3.42
411 412 7.345653 TCTTTTTCTCTCATAAGGGATGCTAGA 59.654 37.037 0.00 0.00 35.29 2.43
412 413 7.437713 TTTTCTCTCATAAGGGATGCTAGAA 57.562 36.000 0.00 0.00 35.72 2.10
413 414 6.412362 TTCTCTCATAAGGGATGCTAGAAC 57.588 41.667 0.00 0.00 34.07 3.01
414 415 4.835615 TCTCTCATAAGGGATGCTAGAACC 59.164 45.833 0.00 0.00 35.29 3.62
415 416 3.904339 TCTCATAAGGGATGCTAGAACCC 59.096 47.826 10.16 10.16 43.55 4.11
416 417 3.648067 CTCATAAGGGATGCTAGAACCCA 59.352 47.826 17.40 3.13 45.43 4.51
417 418 4.242811 TCATAAGGGATGCTAGAACCCAT 58.757 43.478 17.40 10.62 45.43 4.00
418 419 5.411493 TCATAAGGGATGCTAGAACCCATA 58.589 41.667 17.40 12.06 45.43 2.74
419 420 5.849475 TCATAAGGGATGCTAGAACCCATAA 59.151 40.000 17.40 6.47 45.43 1.90
420 421 6.331572 TCATAAGGGATGCTAGAACCCATAAA 59.668 38.462 17.40 4.89 45.43 1.40
421 422 4.713792 AGGGATGCTAGAACCCATAAAG 57.286 45.455 17.40 0.00 45.43 1.85
422 423 3.149981 GGGATGCTAGAACCCATAAAGC 58.850 50.000 12.41 0.00 42.81 3.51
423 424 3.181439 GGGATGCTAGAACCCATAAAGCT 60.181 47.826 12.41 0.00 42.81 3.74
424 425 3.817647 GGATGCTAGAACCCATAAAGCTG 59.182 47.826 0.00 0.00 34.28 4.24
425 426 4.444876 GGATGCTAGAACCCATAAAGCTGA 60.445 45.833 0.00 0.00 34.28 4.26
426 427 3.873910 TGCTAGAACCCATAAAGCTGAC 58.126 45.455 0.00 0.00 34.28 3.51
427 428 3.519510 TGCTAGAACCCATAAAGCTGACT 59.480 43.478 0.00 0.00 34.28 3.41
428 429 3.873952 GCTAGAACCCATAAAGCTGACTG 59.126 47.826 0.00 0.00 0.00 3.51
429 430 4.624125 GCTAGAACCCATAAAGCTGACTGT 60.624 45.833 0.00 0.00 0.00 3.55
430 431 5.395324 GCTAGAACCCATAAAGCTGACTGTA 60.395 44.000 0.00 0.00 0.00 2.74
431 432 5.499004 AGAACCCATAAAGCTGACTGTAA 57.501 39.130 0.00 0.00 0.00 2.41
432 433 5.876357 AGAACCCATAAAGCTGACTGTAAA 58.124 37.500 0.00 0.00 0.00 2.01
433 434 6.485171 AGAACCCATAAAGCTGACTGTAAAT 58.515 36.000 0.00 0.00 0.00 1.40
434 435 6.948309 AGAACCCATAAAGCTGACTGTAAATT 59.052 34.615 0.00 0.00 0.00 1.82
435 436 7.451566 AGAACCCATAAAGCTGACTGTAAATTT 59.548 33.333 0.00 0.00 0.00 1.82
436 437 8.644374 AACCCATAAAGCTGACTGTAAATTTA 57.356 30.769 0.00 0.00 0.00 1.40
437 438 8.823220 ACCCATAAAGCTGACTGTAAATTTAT 57.177 30.769 0.31 0.00 0.00 1.40
438 439 9.914834 ACCCATAAAGCTGACTGTAAATTTATA 57.085 29.630 0.31 0.00 0.00 0.98
444 445 8.863872 AAGCTGACTGTAAATTTATAACCTGT 57.136 30.769 0.31 0.00 0.00 4.00
445 446 8.863872 AGCTGACTGTAAATTTATAACCTGTT 57.136 30.769 0.31 0.00 0.00 3.16
446 447 9.297037 AGCTGACTGTAAATTTATAACCTGTTT 57.703 29.630 0.31 0.00 0.00 2.83
447 448 9.908152 GCTGACTGTAAATTTATAACCTGTTTT 57.092 29.630 0.31 0.00 0.00 2.43
459 460 8.631480 TTATAACCTGTTTTTCTTCTCTTCCC 57.369 34.615 0.00 0.00 0.00 3.97
460 461 4.797912 ACCTGTTTTTCTTCTCTTCCCT 57.202 40.909 0.00 0.00 0.00 4.20
461 462 4.720046 ACCTGTTTTTCTTCTCTTCCCTC 58.280 43.478 0.00 0.00 0.00 4.30
462 463 4.413851 ACCTGTTTTTCTTCTCTTCCCTCT 59.586 41.667 0.00 0.00 0.00 3.69
463 464 5.607171 ACCTGTTTTTCTTCTCTTCCCTCTA 59.393 40.000 0.00 0.00 0.00 2.43
464 465 6.101296 ACCTGTTTTTCTTCTCTTCCCTCTAA 59.899 38.462 0.00 0.00 0.00 2.10
465 466 6.428465 CCTGTTTTTCTTCTCTTCCCTCTAAC 59.572 42.308 0.00 0.00 0.00 2.34
466 467 6.296803 TGTTTTTCTTCTCTTCCCTCTAACC 58.703 40.000 0.00 0.00 0.00 2.85
467 468 6.126594 TGTTTTTCTTCTCTTCCCTCTAACCA 60.127 38.462 0.00 0.00 0.00 3.67
468 469 6.509523 TTTTCTTCTCTTCCCTCTAACCAA 57.490 37.500 0.00 0.00 0.00 3.67
469 470 6.509523 TTTCTTCTCTTCCCTCTAACCAAA 57.490 37.500 0.00 0.00 0.00 3.28
470 471 5.485209 TCTTCTCTTCCCTCTAACCAAAC 57.515 43.478 0.00 0.00 0.00 2.93
471 472 4.905456 TCTTCTCTTCCCTCTAACCAAACA 59.095 41.667 0.00 0.00 0.00 2.83
472 473 5.368523 TCTTCTCTTCCCTCTAACCAAACAA 59.631 40.000 0.00 0.00 0.00 2.83
473 474 5.640158 TCTCTTCCCTCTAACCAAACAAA 57.360 39.130 0.00 0.00 0.00 2.83
474 475 6.008696 TCTCTTCCCTCTAACCAAACAAAA 57.991 37.500 0.00 0.00 0.00 2.44
475 476 6.428295 TCTCTTCCCTCTAACCAAACAAAAA 58.572 36.000 0.00 0.00 0.00 1.94
476 477 7.066781 TCTCTTCCCTCTAACCAAACAAAAAT 58.933 34.615 0.00 0.00 0.00 1.82
477 478 7.563556 TCTCTTCCCTCTAACCAAACAAAAATT 59.436 33.333 0.00 0.00 0.00 1.82
478 479 8.084985 TCTTCCCTCTAACCAAACAAAAATTT 57.915 30.769 0.00 0.00 0.00 1.82
479 480 9.203163 TCTTCCCTCTAACCAAACAAAAATTTA 57.797 29.630 0.00 0.00 0.00 1.40
480 481 9.825109 CTTCCCTCTAACCAAACAAAAATTTAA 57.175 29.630 0.00 0.00 0.00 1.52
515 516 8.900781 TCTTATAGATTACCTATATCACCGTGC 58.099 37.037 0.00 0.00 39.40 5.34
516 517 8.818622 TTATAGATTACCTATATCACCGTGCT 57.181 34.615 0.00 0.00 39.40 4.40
517 518 9.910267 TTATAGATTACCTATATCACCGTGCTA 57.090 33.333 0.00 0.00 39.40 3.49
518 519 8.998277 ATAGATTACCTATATCACCGTGCTAT 57.002 34.615 0.83 0.83 36.35 2.97
520 521 8.998277 AGATTACCTATATCACCGTGCTATAT 57.002 34.615 3.21 1.54 0.00 0.86
521 522 9.422681 AGATTACCTATATCACCGTGCTATATT 57.577 33.333 3.21 0.00 0.00 1.28
526 527 9.871238 ACCTATATCACCGTGCTATATTTTTAG 57.129 33.333 3.21 0.00 0.00 1.85
527 528 9.871238 CCTATATCACCGTGCTATATTTTTAGT 57.129 33.333 3.21 0.00 0.00 2.24
560 561 5.890110 CGTAAGAACTGAACGCATATCAT 57.110 39.130 0.00 0.00 43.02 2.45
561 562 6.274001 CGTAAGAACTGAACGCATATCATT 57.726 37.500 0.00 0.00 43.02 2.57
562 563 6.122782 CGTAAGAACTGAACGCATATCATTG 58.877 40.000 0.00 0.00 43.02 2.82
563 564 6.019881 CGTAAGAACTGAACGCATATCATTGA 60.020 38.462 0.00 0.00 43.02 2.57
564 565 6.741992 AAGAACTGAACGCATATCATTGAA 57.258 33.333 0.00 0.00 0.00 2.69
565 566 6.741992 AGAACTGAACGCATATCATTGAAA 57.258 33.333 0.00 0.00 0.00 2.69
566 567 7.144722 AGAACTGAACGCATATCATTGAAAA 57.855 32.000 0.00 0.00 0.00 2.29
567 568 7.246311 AGAACTGAACGCATATCATTGAAAAG 58.754 34.615 0.00 0.00 0.00 2.27
568 569 6.500684 ACTGAACGCATATCATTGAAAAGT 57.499 33.333 0.00 0.00 0.00 2.66
569 570 7.609760 ACTGAACGCATATCATTGAAAAGTA 57.390 32.000 0.00 0.00 0.00 2.24
570 571 8.213518 ACTGAACGCATATCATTGAAAAGTAT 57.786 30.769 0.00 0.00 0.00 2.12
571 572 9.325198 ACTGAACGCATATCATTGAAAAGTATA 57.675 29.630 0.00 0.00 0.00 1.47
608 609 2.455674 TGCGAACACTAGCATCAAGT 57.544 45.000 0.00 0.00 38.59 3.16
609 610 2.337583 TGCGAACACTAGCATCAAGTC 58.662 47.619 0.00 0.00 38.59 3.01
610 611 2.029020 TGCGAACACTAGCATCAAGTCT 60.029 45.455 0.00 0.00 38.59 3.24
611 612 3.192633 TGCGAACACTAGCATCAAGTCTA 59.807 43.478 0.00 0.00 38.59 2.59
612 613 3.794028 GCGAACACTAGCATCAAGTCTAG 59.206 47.826 0.00 0.00 38.52 2.43
613 614 3.794028 CGAACACTAGCATCAAGTCTAGC 59.206 47.826 0.00 0.00 36.60 3.42
614 615 4.675408 CGAACACTAGCATCAAGTCTAGCA 60.675 45.833 0.00 0.00 36.60 3.49
615 616 4.116747 ACACTAGCATCAAGTCTAGCAC 57.883 45.455 0.00 0.00 36.60 4.40
616 617 3.766591 ACACTAGCATCAAGTCTAGCACT 59.233 43.478 0.00 0.00 36.60 4.40
618 619 5.419155 ACACTAGCATCAAGTCTAGCACTTA 59.581 40.000 7.10 0.08 44.14 2.24
619 620 6.071334 ACACTAGCATCAAGTCTAGCACTTAA 60.071 38.462 7.10 0.00 44.14 1.85
620 621 6.813649 CACTAGCATCAAGTCTAGCACTTAAA 59.186 38.462 7.10 1.67 44.14 1.52
621 622 7.493971 CACTAGCATCAAGTCTAGCACTTAAAT 59.506 37.037 7.10 3.37 44.14 1.40
622 623 6.917217 AGCATCAAGTCTAGCACTTAAATC 57.083 37.500 7.10 0.85 44.14 2.17
623 624 6.648192 AGCATCAAGTCTAGCACTTAAATCT 58.352 36.000 7.10 2.48 44.14 2.40
624 625 7.108847 AGCATCAAGTCTAGCACTTAAATCTT 58.891 34.615 7.10 0.00 44.14 2.40
625 626 7.065563 AGCATCAAGTCTAGCACTTAAATCTTG 59.934 37.037 7.10 0.00 44.14 3.02
626 627 7.065085 GCATCAAGTCTAGCACTTAAATCTTGA 59.935 37.037 0.00 0.00 44.14 3.02
627 628 9.107177 CATCAAGTCTAGCACTTAAATCTTGAT 57.893 33.333 10.08 10.08 44.14 2.57
628 629 8.484641 TCAAGTCTAGCACTTAAATCTTGATG 57.515 34.615 7.10 0.00 44.14 3.07
629 630 8.314021 TCAAGTCTAGCACTTAAATCTTGATGA 58.686 33.333 7.10 0.00 44.14 2.92
630 631 8.602328 CAAGTCTAGCACTTAAATCTTGATGAG 58.398 37.037 7.10 0.00 44.14 2.90
631 632 6.760770 AGTCTAGCACTTAAATCTTGATGAGC 59.239 38.462 0.00 0.00 26.56 4.26
632 633 6.760770 GTCTAGCACTTAAATCTTGATGAGCT 59.239 38.462 0.00 0.00 0.00 4.09
633 634 5.814764 AGCACTTAAATCTTGATGAGCTG 57.185 39.130 0.00 0.00 0.00 4.24
634 635 5.494724 AGCACTTAAATCTTGATGAGCTGA 58.505 37.500 0.00 0.00 0.00 4.26
635 636 6.120905 AGCACTTAAATCTTGATGAGCTGAT 58.879 36.000 0.00 0.00 0.00 2.90
636 637 7.278135 AGCACTTAAATCTTGATGAGCTGATA 58.722 34.615 0.00 0.00 0.00 2.15
637 638 7.441760 AGCACTTAAATCTTGATGAGCTGATAG 59.558 37.037 0.00 0.00 0.00 2.08
638 639 7.226325 GCACTTAAATCTTGATGAGCTGATAGT 59.774 37.037 0.00 0.00 0.00 2.12
639 640 9.755804 CACTTAAATCTTGATGAGCTGATAGTA 57.244 33.333 0.00 0.00 0.00 1.82
640 641 9.757227 ACTTAAATCTTGATGAGCTGATAGTAC 57.243 33.333 0.00 0.00 0.00 2.73
641 642 9.979578 CTTAAATCTTGATGAGCTGATAGTACT 57.020 33.333 0.00 0.00 0.00 2.73
644 645 8.704849 AATCTTGATGAGCTGATAGTACTAGT 57.295 34.615 8.85 0.00 0.00 2.57
645 646 9.800572 AATCTTGATGAGCTGATAGTACTAGTA 57.199 33.333 8.85 0.00 0.00 1.82
646 647 8.610248 TCTTGATGAGCTGATAGTACTAGTAC 57.390 38.462 23.03 23.03 36.35 2.73
647 648 7.662258 TCTTGATGAGCTGATAGTACTAGTACC 59.338 40.741 25.97 13.66 36.75 3.34
648 649 6.838382 TGATGAGCTGATAGTACTAGTACCA 58.162 40.000 25.97 15.80 36.75 3.25
649 650 6.711194 TGATGAGCTGATAGTACTAGTACCAC 59.289 42.308 25.97 18.12 36.75 4.16
650 651 6.249911 TGAGCTGATAGTACTAGTACCACT 57.750 41.667 25.97 14.56 36.75 4.00
651 652 6.056236 TGAGCTGATAGTACTAGTACCACTG 58.944 44.000 25.97 20.24 36.75 3.66
652 653 4.822896 AGCTGATAGTACTAGTACCACTGC 59.177 45.833 25.97 26.22 36.75 4.40
653 654 4.319622 GCTGATAGTACTAGTACCACTGCG 60.320 50.000 25.97 13.35 36.75 5.18
654 655 4.132336 TGATAGTACTAGTACCACTGCGG 58.868 47.826 25.97 0.00 42.50 5.69
663 664 3.266964 CCACTGCGGTGTTCATGG 58.733 61.111 23.77 3.99 41.53 3.66
664 665 2.334946 CCACTGCGGTGTTCATGGG 61.335 63.158 23.77 3.14 41.53 4.00
665 666 1.600636 CACTGCGGTGTTCATGGGT 60.601 57.895 17.96 0.00 38.54 4.51
666 667 1.600636 ACTGCGGTGTTCATGGGTG 60.601 57.895 0.00 0.00 0.00 4.61
667 668 1.302431 CTGCGGTGTTCATGGGTGA 60.302 57.895 0.00 0.00 0.00 4.02
668 669 1.300971 CTGCGGTGTTCATGGGTGAG 61.301 60.000 0.00 0.00 35.39 3.51
669 670 1.302511 GCGGTGTTCATGGGTGAGT 60.303 57.895 0.00 0.00 35.39 3.41
670 671 0.036765 GCGGTGTTCATGGGTGAGTA 60.037 55.000 0.00 0.00 35.39 2.59
671 672 2.007049 GCGGTGTTCATGGGTGAGTAG 61.007 57.143 0.00 0.00 35.39 2.57
672 673 1.739067 GGTGTTCATGGGTGAGTAGC 58.261 55.000 0.00 0.00 35.39 3.58
673 674 1.359848 GTGTTCATGGGTGAGTAGCG 58.640 55.000 0.00 0.00 35.39 4.26
674 675 0.973632 TGTTCATGGGTGAGTAGCGT 59.026 50.000 0.00 0.00 35.39 5.07
675 676 1.346395 TGTTCATGGGTGAGTAGCGTT 59.654 47.619 0.00 0.00 35.39 4.84
676 677 2.000447 GTTCATGGGTGAGTAGCGTTC 59.000 52.381 0.00 0.00 35.39 3.95
677 678 0.172578 TCATGGGTGAGTAGCGTTCG 59.827 55.000 0.00 0.00 0.00 3.95
678 679 1.153628 ATGGGTGAGTAGCGTTCGC 60.154 57.895 9.24 9.24 0.00 4.70
679 680 2.879462 GGGTGAGTAGCGTTCGCG 60.879 66.667 11.40 0.00 44.73 5.87
680 681 2.126580 GGTGAGTAGCGTTCGCGT 60.127 61.111 5.77 0.83 43.62 6.01
681 682 2.150837 GGTGAGTAGCGTTCGCGTC 61.151 63.158 5.77 10.11 43.62 5.19
682 683 2.150837 GTGAGTAGCGTTCGCGTCC 61.151 63.158 5.77 0.00 43.62 4.79
683 684 2.943034 GAGTAGCGTTCGCGTCCG 60.943 66.667 5.77 11.02 43.62 4.79
684 685 3.657835 GAGTAGCGTTCGCGTCCGT 62.658 63.158 18.17 9.87 43.62 4.69
685 686 2.098298 GTAGCGTTCGCGTCCGTA 59.902 61.111 18.17 9.12 43.62 4.02
686 687 2.098298 TAGCGTTCGCGTCCGTAC 59.902 61.111 18.17 6.04 43.62 3.67
687 688 2.390599 TAGCGTTCGCGTCCGTACT 61.391 57.895 18.17 11.70 43.62 2.73
688 689 2.567470 TAGCGTTCGCGTCCGTACTG 62.567 60.000 18.17 0.00 43.62 2.74
689 690 2.127118 CGTTCGCGTCCGTACTGT 60.127 61.111 5.77 0.00 33.31 3.55
690 691 2.423031 CGTTCGCGTCCGTACTGTG 61.423 63.158 5.77 0.00 33.31 3.66
691 692 1.370900 GTTCGCGTCCGTACTGTGT 60.371 57.895 5.77 0.00 32.82 3.72
692 693 0.110238 GTTCGCGTCCGTACTGTGTA 60.110 55.000 5.77 0.00 32.82 2.90
693 694 0.590682 TTCGCGTCCGTACTGTGTAA 59.409 50.000 5.77 0.00 35.54 2.41
694 695 0.590682 TCGCGTCCGTACTGTGTAAA 59.409 50.000 5.77 0.00 35.54 2.01
695 696 0.979811 CGCGTCCGTACTGTGTAAAG 59.020 55.000 0.00 0.00 0.00 1.85
696 697 1.664016 CGCGTCCGTACTGTGTAAAGT 60.664 52.381 0.00 0.00 0.00 2.66
704 705 5.008613 TCCGTACTGTGTAAAGTAAACTCGT 59.991 40.000 0.00 0.00 34.50 4.18
711 712 9.224267 ACTGTGTAAAGTAAACTCGTATCTCTA 57.776 33.333 0.00 0.00 0.00 2.43
780 781 5.163652 GGCTCCTCGTGCAATTATTAACTTT 60.164 40.000 0.00 0.00 0.00 2.66
812 813 3.564345 CTCCTGCCAGCTGCCACTT 62.564 63.158 8.66 0.00 40.16 3.16
856 859 1.977009 CCGATCCGATCCGATCCCA 60.977 63.158 15.61 0.00 36.13 4.37
870 873 2.854300 ATCCCACGGCCATTCCAACC 62.854 60.000 2.24 0.00 34.01 3.77
873 876 3.264845 ACGGCCATTCCAACCCCT 61.265 61.111 2.24 0.00 34.01 4.79
876 879 0.106217 CGGCCATTCCAACCCCTAAT 60.106 55.000 2.24 0.00 34.01 1.73
884 887 1.203583 TCCAACCCCTAATACCCCACA 60.204 52.381 0.00 0.00 0.00 4.17
888 891 1.300927 CCCCTAATACCCCACACCAA 58.699 55.000 0.00 0.00 0.00 3.67
889 892 1.856920 CCCCTAATACCCCACACCAAT 59.143 52.381 0.00 0.00 0.00 3.16
890 893 2.158519 CCCCTAATACCCCACACCAATC 60.159 54.545 0.00 0.00 0.00 2.67
892 895 2.783510 CCTAATACCCCACACCAATCCT 59.216 50.000 0.00 0.00 0.00 3.24
894 897 2.286935 ATACCCCACACCAATCCTCT 57.713 50.000 0.00 0.00 0.00 3.69
895 898 1.580059 TACCCCACACCAATCCTCTC 58.420 55.000 0.00 0.00 0.00 3.20
942 954 2.741211 GGGAAACGACTCACGCCC 60.741 66.667 0.00 0.00 46.94 6.13
943 955 2.741211 GGAAACGACTCACGCCCC 60.741 66.667 0.00 0.00 46.94 5.80
944 956 2.741211 GAAACGACTCACGCCCCC 60.741 66.667 0.00 0.00 46.94 5.40
1605 1632 2.292794 TAGGCCTGGTGAATCGCGAC 62.293 60.000 17.99 0.00 0.00 5.19
1613 1643 2.167693 TGGTGAATCGCGACTCCTTATT 59.832 45.455 15.75 1.26 0.00 1.40
1654 1685 2.472695 ATTGCGACCAGAAGCTAACA 57.527 45.000 0.00 0.00 0.00 2.41
1671 1702 2.742428 ACAGCAGGGCATTGTATGAT 57.258 45.000 0.00 0.00 0.00 2.45
1913 1944 7.691993 ACCTGACCTTGTTTATATGGATACT 57.308 36.000 0.00 0.00 37.61 2.12
1973 2004 3.548818 GCGCCTGGTTGCATATTTAGAAG 60.549 47.826 0.00 0.00 0.00 2.85
1980 2011 5.709631 TGGTTGCATATTTAGAAGAGCACAA 59.290 36.000 0.00 0.00 0.00 3.33
2026 2057 8.774586 GGTTATAGTCAATACTGCTTACCAATG 58.225 37.037 0.00 0.00 36.36 2.82
2088 2119 5.252547 TGGTTGCATATTTAGAAGAGCACA 58.747 37.500 0.00 0.00 0.00 4.57
2161 2193 5.465056 GCTGCTTAGTGATTCTAGGAACATC 59.535 44.000 0.00 0.00 0.00 3.06
2190 2222 7.708752 CAGTTTGGTTTGCCTGTTTATTTTCTA 59.291 33.333 0.00 0.00 35.27 2.10
2243 2275 4.215908 TCCTTCAGGACTATGAATACGCT 58.784 43.478 0.00 0.00 39.78 5.07
2256 2288 8.917088 ACTATGAATACGCTAGTTTTAACCCTA 58.083 33.333 0.00 0.00 0.00 3.53
2333 2365 1.374252 ACCGCACGTGATGGACTTC 60.374 57.895 27.68 5.04 0.00 3.01
2462 2494 4.314522 TTCCCCTGCATAATTTCAGACA 57.685 40.909 0.00 0.00 32.26 3.41
2777 2809 2.545106 CTCCACAACAAAAGGCAATTGC 59.455 45.455 22.47 22.47 41.14 3.56
2849 2881 6.607004 TTTTTCGGTTCTTCCTCTATCTCT 57.393 37.500 0.00 0.00 0.00 3.10
2934 2966 1.445582 GTACTGGGACACGAAGCCG 60.446 63.158 0.00 0.00 42.50 5.52
2975 3007 1.028330 ACAACCAGCTGATCATGCGG 61.028 55.000 17.39 17.48 35.28 5.69
3008 3045 6.545504 TCTTTTTCTTATAGCATCCATCGC 57.454 37.500 0.00 0.00 0.00 4.58
3023 3060 0.466555 ATCGCCCTCTCGAGTAGCTT 60.467 55.000 13.13 2.13 42.14 3.74
3164 3204 1.070577 CACAAGCTTCTTTCCGTGTCG 60.071 52.381 0.00 0.00 0.00 4.35
3185 3225 2.351726 GCCTGTTACATCGTTCATGTCC 59.648 50.000 0.00 0.00 42.62 4.02
3186 3226 2.603110 CCTGTTACATCGTTCATGTCCG 59.397 50.000 0.00 0.00 42.62 4.79
3248 3288 1.270550 CTGTGAACCCTGAAACCATGC 59.729 52.381 0.00 0.00 0.00 4.06
3249 3289 1.327303 GTGAACCCTGAAACCATGCA 58.673 50.000 0.00 0.00 0.00 3.96
3273 3313 2.424956 GACCAGATTGTCCAAAGGATGC 59.575 50.000 0.00 0.00 32.73 3.91
3274 3314 1.753073 CCAGATTGTCCAAAGGATGCC 59.247 52.381 0.00 0.00 32.73 4.40
3275 3315 1.402968 CAGATTGTCCAAAGGATGCCG 59.597 52.381 0.00 0.00 32.73 5.69
3276 3316 0.101219 GATTGTCCAAAGGATGCCGC 59.899 55.000 0.00 0.00 32.73 6.53
3277 3317 0.611618 ATTGTCCAAAGGATGCCGCA 60.612 50.000 0.00 0.00 32.73 5.69
3278 3318 0.611618 TTGTCCAAAGGATGCCGCAT 60.612 50.000 5.28 5.28 32.73 4.73
3279 3319 1.031571 TGTCCAAAGGATGCCGCATC 61.032 55.000 22.92 22.92 39.87 3.91
3280 3320 0.749454 GTCCAAAGGATGCCGCATCT 60.749 55.000 28.09 14.44 40.39 2.90
3282 3322 1.065273 CAAAGGATGCCGCATCTGC 59.935 57.895 28.09 15.48 40.39 4.26
3285 3373 4.575973 GGATGCCGCATCTGCCCT 62.576 66.667 28.09 0.00 40.39 5.19
3322 3410 1.169034 TGTGTTTGCCGTGCTGCATA 61.169 50.000 5.27 0.00 41.70 3.14
3331 3419 1.643880 CGTGCTGCATACTGTCATCA 58.356 50.000 5.27 0.00 0.00 3.07
3383 3473 0.537143 TTGATGCCTTGCTTCACCGT 60.537 50.000 4.38 0.00 41.25 4.83
3386 3476 1.526575 ATGCCTTGCTTCACCGTTGG 61.527 55.000 0.00 0.00 0.00 3.77
3427 3525 2.202878 GCACTTGCCGGCGATCTA 60.203 61.111 23.90 0.00 34.31 1.98
3428 3526 2.240500 GCACTTGCCGGCGATCTAG 61.241 63.158 23.90 15.45 34.31 2.43
3429 3527 1.141881 CACTTGCCGGCGATCTAGT 59.858 57.895 23.90 16.10 0.00 2.57
3430 3528 0.384309 CACTTGCCGGCGATCTAGTA 59.616 55.000 23.90 0.00 0.00 1.82
3431 3529 0.384669 ACTTGCCGGCGATCTAGTAC 59.615 55.000 23.90 0.00 0.00 2.73
3432 3530 0.384309 CTTGCCGGCGATCTAGTACA 59.616 55.000 23.90 0.00 0.00 2.90
3433 3531 0.384309 TTGCCGGCGATCTAGTACAG 59.616 55.000 23.90 0.00 0.00 2.74
3446 3859 5.593679 TCTAGTACAGCCCATGTTAAGAC 57.406 43.478 0.00 0.00 39.96 3.01
3455 3868 1.398390 CCATGTTAAGACGGAAGCTGC 59.602 52.381 0.00 0.00 0.00 5.25
3458 3871 1.070134 TGTTAAGACGGAAGCTGCTGT 59.930 47.619 5.62 5.62 0.00 4.40
3486 3902 0.674895 GTGGCCTCAGCTCGAAATGT 60.675 55.000 3.32 0.00 39.73 2.71
3488 3904 1.168714 GGCCTCAGCTCGAAATGTTT 58.831 50.000 0.00 0.00 39.73 2.83
3489 3905 1.131315 GGCCTCAGCTCGAAATGTTTC 59.869 52.381 0.00 0.00 39.73 2.78
3490 3906 1.806542 GCCTCAGCTCGAAATGTTTCA 59.193 47.619 6.33 0.00 34.83 2.69
3491 3907 2.421424 GCCTCAGCTCGAAATGTTTCAT 59.579 45.455 6.33 0.00 34.83 2.57
3503 3919 5.281376 CGAAATGTTTCATCAGTGCGTAAAG 59.719 40.000 6.33 0.00 37.01 1.85
3505 3921 4.990543 TGTTTCATCAGTGCGTAAAGAG 57.009 40.909 0.00 0.00 0.00 2.85
3506 3922 4.627058 TGTTTCATCAGTGCGTAAAGAGA 58.373 39.130 0.00 0.00 0.00 3.10
3513 3929 4.237724 TCAGTGCGTAAAGAGACAATGAG 58.762 43.478 0.00 0.00 32.77 2.90
3530 3946 4.946784 ATGAGTCACGAGGCATAAAAAC 57.053 40.909 0.00 0.00 0.00 2.43
3531 3947 4.002906 TGAGTCACGAGGCATAAAAACT 57.997 40.909 0.00 0.00 0.00 2.66
3532 3948 3.745975 TGAGTCACGAGGCATAAAAACTG 59.254 43.478 0.00 0.00 0.00 3.16
3533 3949 3.994392 GAGTCACGAGGCATAAAAACTGA 59.006 43.478 0.00 0.00 0.00 3.41
3534 3950 3.997021 AGTCACGAGGCATAAAAACTGAG 59.003 43.478 0.00 0.00 0.00 3.35
3535 3951 2.742053 TCACGAGGCATAAAAACTGAGC 59.258 45.455 0.00 0.00 0.00 4.26
3623 4041 2.821969 GACCACTGGTGCTGATGATTTT 59.178 45.455 5.10 0.00 35.25 1.82
3626 4044 4.641989 ACCACTGGTGCTGATGATTTTATC 59.358 41.667 0.00 0.00 32.98 1.75
3652 4070 3.374988 TGTTGAGCGAATTCACATGGATC 59.625 43.478 6.22 0.00 0.00 3.36
3655 4073 3.873361 TGAGCGAATTCACATGGATCTTC 59.127 43.478 6.22 0.00 0.00 2.87
3657 4075 3.244670 CGAATTCACATGGATCTTCGC 57.755 47.619 6.22 0.00 35.58 4.70
3661 4079 0.107703 TCACATGGATCTTCGCACCC 60.108 55.000 0.00 0.00 0.00 4.61
3662 4080 0.107508 CACATGGATCTTCGCACCCT 60.108 55.000 0.00 0.00 0.00 4.34
3664 4082 0.178767 CATGGATCTTCGCACCCTCA 59.821 55.000 0.00 0.00 0.00 3.86
3665 4083 0.179000 ATGGATCTTCGCACCCTCAC 59.821 55.000 0.00 0.00 0.00 3.51
3713 4132 2.284150 TGCGACTGTGTTTTCTTCTTCG 59.716 45.455 0.00 0.00 0.00 3.79
3726 4145 9.280174 TGTTTTCTTCTTCGGAGTAAATTGTAT 57.720 29.630 0.00 0.00 0.00 2.29
3730 4149 8.703604 TCTTCTTCGGAGTAAATTGTATTCTG 57.296 34.615 0.00 0.00 0.00 3.02
3734 4153 8.533657 TCTTCGGAGTAAATTGTATTCTGGTAA 58.466 33.333 0.00 0.00 0.00 2.85
3735 4154 8.483307 TTCGGAGTAAATTGTATTCTGGTAAC 57.517 34.615 0.00 0.00 0.00 2.50
3738 4157 7.980099 CGGAGTAAATTGTATTCTGGTAACTCT 59.020 37.037 0.00 0.00 32.29 3.24
3742 4161 7.923414 AAATTGTATTCTGGTAACTCTCCAC 57.077 36.000 0.00 0.00 37.61 4.02
3774 4193 5.680408 GCCGTACAAATGAGAGGTATGTGTA 60.680 44.000 0.00 0.00 29.24 2.90
3778 4197 7.544566 CGTACAAATGAGAGGTATGTGTAGTTT 59.455 37.037 0.00 0.00 30.87 2.66
3828 4247 2.049802 CAGCCTGCGCAAACAAGG 60.050 61.111 13.05 10.27 37.52 3.61
3832 4251 2.127118 CTGCGCAAACAAGGCTCG 60.127 61.111 13.05 0.00 0.00 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.911766 GCTACCCTATAGCCCGGCA 60.912 63.158 13.15 0.00 34.65 5.69
2 3 1.605971 GAGCTACCCTATAGCCCGGC 61.606 65.000 0.00 0.00 41.25 6.13
3 4 0.251653 TGAGCTACCCTATAGCCCGG 60.252 60.000 0.00 0.00 41.25 5.73
4 5 1.178276 CTGAGCTACCCTATAGCCCG 58.822 60.000 2.35 0.00 41.25 6.13
6 7 0.528470 CGCTGAGCTACCCTATAGCC 59.472 60.000 1.78 0.00 41.25 3.93
7 8 1.068194 CACGCTGAGCTACCCTATAGC 60.068 57.143 1.78 0.00 40.67 2.97
8 9 1.068194 GCACGCTGAGCTACCCTATAG 60.068 57.143 1.78 0.00 0.00 1.31
9 10 0.959553 GCACGCTGAGCTACCCTATA 59.040 55.000 1.78 0.00 0.00 1.31
10 11 1.043116 TGCACGCTGAGCTACCCTAT 61.043 55.000 1.78 0.00 0.00 2.57
11 12 1.254975 TTGCACGCTGAGCTACCCTA 61.255 55.000 1.78 0.00 0.00 3.53
12 13 2.583441 TTGCACGCTGAGCTACCCT 61.583 57.895 1.78 0.00 0.00 4.34
13 14 2.047274 TTGCACGCTGAGCTACCC 60.047 61.111 1.78 0.00 0.00 3.69
14 15 1.021390 ATGTTGCACGCTGAGCTACC 61.021 55.000 1.78 0.00 37.01 3.18
15 16 1.640428 TATGTTGCACGCTGAGCTAC 58.360 50.000 1.78 0.00 38.05 3.58
16 17 2.101415 AGATATGTTGCACGCTGAGCTA 59.899 45.455 1.78 0.00 0.00 3.32
17 18 1.134580 AGATATGTTGCACGCTGAGCT 60.135 47.619 1.78 0.00 0.00 4.09
18 19 1.293924 AGATATGTTGCACGCTGAGC 58.706 50.000 0.00 0.00 0.00 4.26
19 20 3.055591 CCTAGATATGTTGCACGCTGAG 58.944 50.000 0.00 0.00 0.00 3.35
20 21 2.430694 ACCTAGATATGTTGCACGCTGA 59.569 45.455 0.00 0.00 0.00 4.26
21 22 2.797156 GACCTAGATATGTTGCACGCTG 59.203 50.000 0.00 0.00 0.00 5.18
22 23 2.224066 GGACCTAGATATGTTGCACGCT 60.224 50.000 0.00 0.00 0.00 5.07
23 24 2.135933 GGACCTAGATATGTTGCACGC 58.864 52.381 0.00 0.00 0.00 5.34
24 25 2.102420 TGGGACCTAGATATGTTGCACG 59.898 50.000 0.00 0.00 0.00 5.34
25 26 3.838244 TGGGACCTAGATATGTTGCAC 57.162 47.619 0.00 0.00 0.00 4.57
26 27 4.165950 ACATTGGGACCTAGATATGTTGCA 59.834 41.667 0.00 0.00 0.00 4.08
27 28 4.718961 ACATTGGGACCTAGATATGTTGC 58.281 43.478 0.00 0.00 0.00 4.17
28 29 8.621286 GTTAAACATTGGGACCTAGATATGTTG 58.379 37.037 7.04 0.00 36.61 3.33
29 30 8.557450 AGTTAAACATTGGGACCTAGATATGTT 58.443 33.333 1.60 1.60 37.70 2.71
30 31 8.102484 AGTTAAACATTGGGACCTAGATATGT 57.898 34.615 0.00 0.00 0.00 2.29
31 32 8.432805 AGAGTTAAACATTGGGACCTAGATATG 58.567 37.037 0.00 0.00 0.00 1.78
32 33 8.568617 AGAGTTAAACATTGGGACCTAGATAT 57.431 34.615 0.00 0.00 0.00 1.63
33 34 7.989947 AGAGTTAAACATTGGGACCTAGATA 57.010 36.000 0.00 0.00 0.00 1.98
34 35 6.893020 AGAGTTAAACATTGGGACCTAGAT 57.107 37.500 0.00 0.00 0.00 1.98
35 36 7.989947 ATAGAGTTAAACATTGGGACCTAGA 57.010 36.000 0.00 0.00 0.00 2.43
36 37 7.499232 CCAATAGAGTTAAACATTGGGACCTAG 59.501 40.741 4.59 0.00 42.40 3.02
37 38 7.343357 CCAATAGAGTTAAACATTGGGACCTA 58.657 38.462 4.59 0.00 42.40 3.08
38 39 6.187682 CCAATAGAGTTAAACATTGGGACCT 58.812 40.000 4.59 0.00 42.40 3.85
39 40 6.451064 CCAATAGAGTTAAACATTGGGACC 57.549 41.667 4.59 0.00 42.40 4.46
44 45 8.450964 CACTACCACCAATAGAGTTAAACATTG 58.549 37.037 0.00 0.00 0.00 2.82
45 46 8.380099 TCACTACCACCAATAGAGTTAAACATT 58.620 33.333 0.00 0.00 0.00 2.71
46 47 7.913789 TCACTACCACCAATAGAGTTAAACAT 58.086 34.615 0.00 0.00 0.00 2.71
47 48 7.305813 TCACTACCACCAATAGAGTTAAACA 57.694 36.000 0.00 0.00 0.00 2.83
48 49 8.038944 TCATCACTACCACCAATAGAGTTAAAC 58.961 37.037 0.00 0.00 0.00 2.01
49 50 8.141298 TCATCACTACCACCAATAGAGTTAAA 57.859 34.615 0.00 0.00 0.00 1.52
50 51 7.727578 TCATCACTACCACCAATAGAGTTAA 57.272 36.000 0.00 0.00 0.00 2.01
51 52 7.914427 ATCATCACTACCACCAATAGAGTTA 57.086 36.000 0.00 0.00 0.00 2.24
52 53 6.814954 ATCATCACTACCACCAATAGAGTT 57.185 37.500 0.00 0.00 0.00 3.01
53 54 6.384015 TCAATCATCACTACCACCAATAGAGT 59.616 38.462 0.00 0.00 0.00 3.24
54 55 6.820335 TCAATCATCACTACCACCAATAGAG 58.180 40.000 0.00 0.00 0.00 2.43
55 56 6.806668 TCAATCATCACTACCACCAATAGA 57.193 37.500 0.00 0.00 0.00 1.98
56 57 6.429078 CCATCAATCATCACTACCACCAATAG 59.571 42.308 0.00 0.00 0.00 1.73
57 58 6.298361 CCATCAATCATCACTACCACCAATA 58.702 40.000 0.00 0.00 0.00 1.90
58 59 5.135383 CCATCAATCATCACTACCACCAAT 58.865 41.667 0.00 0.00 0.00 3.16
59 60 4.525996 CCATCAATCATCACTACCACCAA 58.474 43.478 0.00 0.00 0.00 3.67
60 61 3.685265 GCCATCAATCATCACTACCACCA 60.685 47.826 0.00 0.00 0.00 4.17
61 62 2.880890 GCCATCAATCATCACTACCACC 59.119 50.000 0.00 0.00 0.00 4.61
62 63 2.880890 GGCCATCAATCATCACTACCAC 59.119 50.000 0.00 0.00 0.00 4.16
63 64 2.158623 GGGCCATCAATCATCACTACCA 60.159 50.000 4.39 0.00 0.00 3.25
64 65 2.158623 TGGGCCATCAATCATCACTACC 60.159 50.000 0.00 0.00 0.00 3.18
65 66 3.213206 TGGGCCATCAATCATCACTAC 57.787 47.619 0.00 0.00 0.00 2.73
66 67 3.435457 CCTTGGGCCATCAATCATCACTA 60.435 47.826 7.26 0.00 0.00 2.74
67 68 2.662866 CTTGGGCCATCAATCATCACT 58.337 47.619 7.26 0.00 0.00 3.41
68 69 1.684983 CCTTGGGCCATCAATCATCAC 59.315 52.381 7.26 0.00 0.00 3.06
69 70 1.411930 CCCTTGGGCCATCAATCATCA 60.412 52.381 7.26 0.00 0.00 3.07
70 71 1.335145 CCCTTGGGCCATCAATCATC 58.665 55.000 7.26 0.00 0.00 2.92
71 72 0.105349 CCCCTTGGGCCATCAATCAT 60.105 55.000 7.26 0.00 35.35 2.45
72 73 1.310715 CCCCTTGGGCCATCAATCA 59.689 57.895 7.26 0.00 35.35 2.57
73 74 4.282881 CCCCTTGGGCCATCAATC 57.717 61.111 7.26 0.00 35.35 2.67
83 84 2.612212 CGAATAAACATCGACCCCTTGG 59.388 50.000 0.00 0.00 42.76 3.61
84 85 2.612212 CCGAATAAACATCGACCCCTTG 59.388 50.000 0.00 0.00 42.76 3.61
85 86 2.914059 CCGAATAAACATCGACCCCTT 58.086 47.619 0.00 0.00 42.76 3.95
86 87 1.474498 GCCGAATAAACATCGACCCCT 60.474 52.381 0.00 0.00 42.76 4.79
87 88 0.942252 GCCGAATAAACATCGACCCC 59.058 55.000 0.00 0.00 42.76 4.95
88 89 0.580104 CGCCGAATAAACATCGACCC 59.420 55.000 0.00 0.00 42.76 4.46
89 90 0.580104 CCGCCGAATAAACATCGACC 59.420 55.000 0.00 0.00 42.76 4.79
90 91 0.580104 CCCGCCGAATAAACATCGAC 59.420 55.000 0.00 0.00 42.76 4.20
91 92 0.460722 TCCCGCCGAATAAACATCGA 59.539 50.000 0.00 0.00 42.76 3.59
92 93 0.859232 CTCCCGCCGAATAAACATCG 59.141 55.000 0.00 0.00 39.92 3.84
93 94 2.234300 TCTCCCGCCGAATAAACATC 57.766 50.000 0.00 0.00 0.00 3.06
94 95 2.494059 CATCTCCCGCCGAATAAACAT 58.506 47.619 0.00 0.00 0.00 2.71
95 96 1.474320 CCATCTCCCGCCGAATAAACA 60.474 52.381 0.00 0.00 0.00 2.83
96 97 1.226746 CCATCTCCCGCCGAATAAAC 58.773 55.000 0.00 0.00 0.00 2.01
97 98 0.834612 ACCATCTCCCGCCGAATAAA 59.165 50.000 0.00 0.00 0.00 1.40
98 99 0.105964 CACCATCTCCCGCCGAATAA 59.894 55.000 0.00 0.00 0.00 1.40
99 100 1.745890 CACCATCTCCCGCCGAATA 59.254 57.895 0.00 0.00 0.00 1.75
100 101 2.505982 CACCATCTCCCGCCGAAT 59.494 61.111 0.00 0.00 0.00 3.34
101 102 3.781307 CCACCATCTCCCGCCGAA 61.781 66.667 0.00 0.00 0.00 4.30
103 104 4.838152 CACCACCATCTCCCGCCG 62.838 72.222 0.00 0.00 0.00 6.46
104 105 4.489771 CCACCACCATCTCCCGCC 62.490 72.222 0.00 0.00 0.00 6.13
105 106 3.717294 ACCACCACCATCTCCCGC 61.717 66.667 0.00 0.00 0.00 6.13
106 107 2.268920 CACCACCACCATCTCCCG 59.731 66.667 0.00 0.00 0.00 5.14
107 108 2.198304 GACCACCACCACCATCTCCC 62.198 65.000 0.00 0.00 0.00 4.30
108 109 1.299976 GACCACCACCACCATCTCC 59.700 63.158 0.00 0.00 0.00 3.71
109 110 1.079127 CGACCACCACCACCATCTC 60.079 63.158 0.00 0.00 0.00 2.75
110 111 0.543410 TACGACCACCACCACCATCT 60.543 55.000 0.00 0.00 0.00 2.90
111 112 0.539986 ATACGACCACCACCACCATC 59.460 55.000 0.00 0.00 0.00 3.51
112 113 0.539986 GATACGACCACCACCACCAT 59.460 55.000 0.00 0.00 0.00 3.55
113 114 0.543410 AGATACGACCACCACCACCA 60.543 55.000 0.00 0.00 0.00 4.17
114 115 1.477553 TAGATACGACCACCACCACC 58.522 55.000 0.00 0.00 0.00 4.61
115 116 2.494870 AGTTAGATACGACCACCACCAC 59.505 50.000 0.00 0.00 0.00 4.16
116 117 2.811410 AGTTAGATACGACCACCACCA 58.189 47.619 0.00 0.00 0.00 4.17
117 118 3.056322 ACAAGTTAGATACGACCACCACC 60.056 47.826 0.00 0.00 0.00 4.61
118 119 4.171754 GACAAGTTAGATACGACCACCAC 58.828 47.826 0.00 0.00 0.00 4.16
119 120 3.194116 GGACAAGTTAGATACGACCACCA 59.806 47.826 0.00 0.00 0.00 4.17
120 121 3.429960 GGGACAAGTTAGATACGACCACC 60.430 52.174 0.00 0.00 0.00 4.61
121 122 3.446516 AGGGACAAGTTAGATACGACCAC 59.553 47.826 0.00 0.00 0.00 4.16
122 123 3.446161 CAGGGACAAGTTAGATACGACCA 59.554 47.826 0.00 0.00 0.00 4.02
123 124 3.446516 ACAGGGACAAGTTAGATACGACC 59.553 47.826 0.00 0.00 0.00 4.79
124 125 4.157289 TGACAGGGACAAGTTAGATACGAC 59.843 45.833 0.00 0.00 0.00 4.34
125 126 4.338012 TGACAGGGACAAGTTAGATACGA 58.662 43.478 0.00 0.00 0.00 3.43
126 127 4.713824 TGACAGGGACAAGTTAGATACG 57.286 45.455 0.00 0.00 0.00 3.06
127 128 6.043411 GTGATGACAGGGACAAGTTAGATAC 58.957 44.000 0.00 0.00 0.00 2.24
128 129 5.719563 TGTGATGACAGGGACAAGTTAGATA 59.280 40.000 0.00 0.00 0.00 1.98
129 130 4.532126 TGTGATGACAGGGACAAGTTAGAT 59.468 41.667 0.00 0.00 0.00 1.98
130 131 3.901222 TGTGATGACAGGGACAAGTTAGA 59.099 43.478 0.00 0.00 0.00 2.10
131 132 4.271696 TGTGATGACAGGGACAAGTTAG 57.728 45.455 0.00 0.00 0.00 2.34
132 133 4.641396 CTTGTGATGACAGGGACAAGTTA 58.359 43.478 12.62 0.00 32.26 2.24
133 134 3.480470 CTTGTGATGACAGGGACAAGTT 58.520 45.455 12.62 0.00 32.26 2.66
134 135 2.811873 GCTTGTGATGACAGGGACAAGT 60.812 50.000 18.24 0.00 37.48 3.16
135 136 1.808945 GCTTGTGATGACAGGGACAAG 59.191 52.381 15.05 15.05 38.00 3.16
136 137 1.877680 CGCTTGTGATGACAGGGACAA 60.878 52.381 0.00 0.00 32.26 3.18
137 138 0.320683 CGCTTGTGATGACAGGGACA 60.321 55.000 0.00 0.00 32.26 4.02
138 139 1.021390 CCGCTTGTGATGACAGGGAC 61.021 60.000 0.00 0.00 32.26 4.46
139 140 1.296392 CCGCTTGTGATGACAGGGA 59.704 57.895 0.00 0.00 32.26 4.20
140 141 1.746615 CCCGCTTGTGATGACAGGG 60.747 63.158 0.00 0.00 32.26 4.45
141 142 1.003355 ACCCGCTTGTGATGACAGG 60.003 57.895 0.00 0.00 32.26 4.00
142 143 1.300971 CCACCCGCTTGTGATGACAG 61.301 60.000 4.23 0.00 38.55 3.51
143 144 1.302431 CCACCCGCTTGTGATGACA 60.302 57.895 4.23 0.00 38.55 3.58
144 145 0.889186 AACCACCCGCTTGTGATGAC 60.889 55.000 4.23 0.00 38.55 3.06
145 146 0.687920 TAACCACCCGCTTGTGATGA 59.312 50.000 4.23 0.00 38.55 2.92
146 147 1.086696 CTAACCACCCGCTTGTGATG 58.913 55.000 4.23 0.00 38.55 3.07
147 148 0.676782 GCTAACCACCCGCTTGTGAT 60.677 55.000 4.23 0.00 38.55 3.06
148 149 1.302192 GCTAACCACCCGCTTGTGA 60.302 57.895 4.23 0.00 38.55 3.58
149 150 2.677003 CGCTAACCACCCGCTTGTG 61.677 63.158 0.00 0.00 35.98 3.33
150 151 2.180159 ATCGCTAACCACCCGCTTGT 62.180 55.000 0.00 0.00 0.00 3.16
151 152 1.449601 ATCGCTAACCACCCGCTTG 60.450 57.895 0.00 0.00 0.00 4.01
152 153 1.449601 CATCGCTAACCACCCGCTT 60.450 57.895 0.00 0.00 0.00 4.68
153 154 2.186903 CATCGCTAACCACCCGCT 59.813 61.111 0.00 0.00 0.00 5.52
154 155 3.573491 GCATCGCTAACCACCCGC 61.573 66.667 0.00 0.00 0.00 6.13
155 156 0.249699 TATGCATCGCTAACCACCCG 60.250 55.000 0.19 0.00 0.00 5.28
156 157 1.202651 ACTATGCATCGCTAACCACCC 60.203 52.381 0.19 0.00 0.00 4.61
157 158 2.135933 GACTATGCATCGCTAACCACC 58.864 52.381 0.19 0.00 0.00 4.61
158 159 1.787155 CGACTATGCATCGCTAACCAC 59.213 52.381 0.19 0.00 31.96 4.16
159 160 1.679153 TCGACTATGCATCGCTAACCA 59.321 47.619 0.19 0.00 39.46 3.67
160 161 2.287668 ACTCGACTATGCATCGCTAACC 60.288 50.000 0.19 0.00 39.46 2.85
161 162 2.721603 CACTCGACTATGCATCGCTAAC 59.278 50.000 0.19 0.00 39.46 2.34
162 163 2.616842 TCACTCGACTATGCATCGCTAA 59.383 45.455 0.19 0.00 39.46 3.09
163 164 2.218603 TCACTCGACTATGCATCGCTA 58.781 47.619 0.19 0.00 39.46 4.26
164 165 1.025041 TCACTCGACTATGCATCGCT 58.975 50.000 0.19 0.00 39.46 4.93
165 166 1.840181 TTCACTCGACTATGCATCGC 58.160 50.000 0.19 0.00 39.46 4.58
166 167 3.000322 GGTTTTCACTCGACTATGCATCG 60.000 47.826 0.19 1.13 41.00 3.84
167 168 4.184629 AGGTTTTCACTCGACTATGCATC 58.815 43.478 0.19 0.00 0.00 3.91
168 169 4.207891 AGGTTTTCACTCGACTATGCAT 57.792 40.909 3.79 3.79 0.00 3.96
169 170 3.678056 AGGTTTTCACTCGACTATGCA 57.322 42.857 0.00 0.00 0.00 3.96
170 171 3.424962 GCAAGGTTTTCACTCGACTATGC 60.425 47.826 0.00 0.00 0.00 3.14
171 172 3.125316 GGCAAGGTTTTCACTCGACTATG 59.875 47.826 0.00 0.00 0.00 2.23
172 173 3.008049 AGGCAAGGTTTTCACTCGACTAT 59.992 43.478 0.00 0.00 0.00 2.12
173 174 2.367567 AGGCAAGGTTTTCACTCGACTA 59.632 45.455 0.00 0.00 0.00 2.59
174 175 1.141053 AGGCAAGGTTTTCACTCGACT 59.859 47.619 0.00 0.00 0.00 4.18
175 176 1.531578 GAGGCAAGGTTTTCACTCGAC 59.468 52.381 0.00 0.00 0.00 4.20
176 177 1.542547 GGAGGCAAGGTTTTCACTCGA 60.543 52.381 0.00 0.00 0.00 4.04
177 178 0.875059 GGAGGCAAGGTTTTCACTCG 59.125 55.000 0.00 0.00 0.00 4.18
178 179 1.981256 TGGAGGCAAGGTTTTCACTC 58.019 50.000 0.00 0.00 0.00 3.51
179 180 2.452600 TTGGAGGCAAGGTTTTCACT 57.547 45.000 0.00 0.00 0.00 3.41
180 181 3.069443 TCAATTGGAGGCAAGGTTTTCAC 59.931 43.478 5.42 0.00 0.00 3.18
181 182 3.303938 TCAATTGGAGGCAAGGTTTTCA 58.696 40.909 5.42 0.00 0.00 2.69
182 183 4.248058 CATCAATTGGAGGCAAGGTTTTC 58.752 43.478 5.42 0.00 0.00 2.29
183 184 4.276058 CATCAATTGGAGGCAAGGTTTT 57.724 40.909 5.42 0.00 0.00 2.43
184 185 3.967332 CATCAATTGGAGGCAAGGTTT 57.033 42.857 5.42 0.00 0.00 3.27
205 206 0.748005 ACACCTATGGGCGTCATTGC 60.748 55.000 0.00 0.00 37.30 3.56
206 207 1.401552 CAACACCTATGGGCGTCATTG 59.598 52.381 0.00 0.00 37.30 2.82
207 208 1.004277 ACAACACCTATGGGCGTCATT 59.996 47.619 0.00 0.00 37.30 2.57
208 209 0.618458 ACAACACCTATGGGCGTCAT 59.382 50.000 0.00 0.00 39.78 3.06
209 210 0.398696 AACAACACCTATGGGCGTCA 59.601 50.000 0.00 0.00 35.63 4.35
210 211 1.530323 AAACAACACCTATGGGCGTC 58.470 50.000 0.00 0.00 35.63 5.19
211 212 1.989706 AAAACAACACCTATGGGCGT 58.010 45.000 0.00 0.00 35.63 5.68
233 234 4.220382 AGATCCCAACGATGCATTCAAAAA 59.780 37.500 0.00 0.00 0.00 1.94
234 235 3.763360 AGATCCCAACGATGCATTCAAAA 59.237 39.130 0.00 0.00 0.00 2.44
235 236 3.355378 AGATCCCAACGATGCATTCAAA 58.645 40.909 0.00 0.00 0.00 2.69
236 237 3.003394 AGATCCCAACGATGCATTCAA 57.997 42.857 0.00 0.00 0.00 2.69
237 238 2.715749 AGATCCCAACGATGCATTCA 57.284 45.000 0.00 0.00 0.00 2.57
238 239 4.380531 TCTAAGATCCCAACGATGCATTC 58.619 43.478 0.00 0.00 0.00 2.67
239 240 4.422073 TCTAAGATCCCAACGATGCATT 57.578 40.909 0.00 0.00 0.00 3.56
240 241 4.130118 GTTCTAAGATCCCAACGATGCAT 58.870 43.478 0.00 0.00 0.00 3.96
241 242 3.055458 TGTTCTAAGATCCCAACGATGCA 60.055 43.478 0.00 0.00 0.00 3.96
242 243 3.531538 TGTTCTAAGATCCCAACGATGC 58.468 45.455 0.00 0.00 0.00 3.91
243 244 4.572389 CCTTGTTCTAAGATCCCAACGATG 59.428 45.833 0.00 0.00 0.00 3.84
244 245 4.225267 ACCTTGTTCTAAGATCCCAACGAT 59.775 41.667 0.00 0.00 0.00 3.73
245 246 3.581332 ACCTTGTTCTAAGATCCCAACGA 59.419 43.478 0.00 0.00 0.00 3.85
246 247 3.939066 ACCTTGTTCTAAGATCCCAACG 58.061 45.455 0.00 0.00 0.00 4.10
247 248 7.939784 ATTAACCTTGTTCTAAGATCCCAAC 57.060 36.000 0.00 0.00 0.00 3.77
248 249 8.832735 ACTATTAACCTTGTTCTAAGATCCCAA 58.167 33.333 0.00 0.00 0.00 4.12
249 250 8.388656 ACTATTAACCTTGTTCTAAGATCCCA 57.611 34.615 0.00 0.00 0.00 4.37
277 278 9.654663 GATAACTTCATTAGCCGGTTATTATCT 57.345 33.333 14.78 1.54 34.54 1.98
278 279 9.431887 TGATAACTTCATTAGCCGGTTATTATC 57.568 33.333 15.01 15.01 34.54 1.75
279 280 9.959721 ATGATAACTTCATTAGCCGGTTATTAT 57.040 29.630 1.90 1.19 42.62 1.28
280 281 9.214957 CATGATAACTTCATTAGCCGGTTATTA 57.785 33.333 1.90 0.00 42.62 0.98
281 282 7.719633 ACATGATAACTTCATTAGCCGGTTATT 59.280 33.333 1.90 0.00 42.62 1.40
282 283 7.224297 ACATGATAACTTCATTAGCCGGTTAT 58.776 34.615 1.90 0.00 42.62 1.89
283 284 6.588204 ACATGATAACTTCATTAGCCGGTTA 58.412 36.000 1.90 0.00 42.62 2.85
284 285 5.437060 ACATGATAACTTCATTAGCCGGTT 58.563 37.500 1.90 0.00 42.62 4.44
285 286 5.036117 ACATGATAACTTCATTAGCCGGT 57.964 39.130 1.90 0.00 42.62 5.28
286 287 6.706270 AGTAACATGATAACTTCATTAGCCGG 59.294 38.462 0.00 0.00 42.62 6.13
287 288 7.715265 AGTAACATGATAACTTCATTAGCCG 57.285 36.000 0.00 0.00 42.62 5.52
303 304 9.875691 TGAGCTAATATGGCTATAAGTAACATG 57.124 33.333 0.00 0.00 40.40 3.21
357 358 8.634444 GGCCCACACATTAATAACATAATAACA 58.366 33.333 0.00 0.00 0.00 2.41
358 359 8.634444 TGGCCCACACATTAATAACATAATAAC 58.366 33.333 0.00 0.00 0.00 1.89
359 360 8.768501 TGGCCCACACATTAATAACATAATAA 57.231 30.769 0.00 0.00 0.00 1.40
360 361 8.948401 ATGGCCCACACATTAATAACATAATA 57.052 30.769 0.00 0.00 0.00 0.98
361 362 7.729881 AGATGGCCCACACATTAATAACATAAT 59.270 33.333 0.00 0.00 0.00 1.28
362 363 7.066142 AGATGGCCCACACATTAATAACATAA 58.934 34.615 0.00 0.00 0.00 1.90
363 364 6.609876 AGATGGCCCACACATTAATAACATA 58.390 36.000 0.00 0.00 0.00 2.29
364 365 5.457686 AGATGGCCCACACATTAATAACAT 58.542 37.500 0.00 0.00 0.00 2.71
365 366 4.865905 AGATGGCCCACACATTAATAACA 58.134 39.130 0.00 0.00 0.00 2.41
366 367 5.852282 AAGATGGCCCACACATTAATAAC 57.148 39.130 0.00 0.00 0.00 1.89
367 368 6.865834 AAAAGATGGCCCACACATTAATAA 57.134 33.333 0.00 0.00 0.00 1.40
368 369 6.667414 AGAAAAAGATGGCCCACACATTAATA 59.333 34.615 0.00 0.00 0.00 0.98
369 370 5.484998 AGAAAAAGATGGCCCACACATTAAT 59.515 36.000 0.00 0.00 0.00 1.40
370 371 4.837860 AGAAAAAGATGGCCCACACATTAA 59.162 37.500 0.00 0.00 0.00 1.40
371 372 4.415596 AGAAAAAGATGGCCCACACATTA 58.584 39.130 0.00 0.00 0.00 1.90
372 373 3.242011 AGAAAAAGATGGCCCACACATT 58.758 40.909 0.00 0.00 0.00 2.71
373 374 2.827921 GAGAAAAAGATGGCCCACACAT 59.172 45.455 0.00 0.00 0.00 3.21
374 375 2.158475 AGAGAAAAAGATGGCCCACACA 60.158 45.455 0.00 0.00 0.00 3.72
375 376 2.489722 GAGAGAAAAAGATGGCCCACAC 59.510 50.000 0.00 0.00 0.00 3.82
376 377 2.108075 TGAGAGAAAAAGATGGCCCACA 59.892 45.455 0.00 0.00 0.00 4.17
377 378 2.795329 TGAGAGAAAAAGATGGCCCAC 58.205 47.619 0.00 0.00 0.00 4.61
378 379 3.744940 ATGAGAGAAAAAGATGGCCCA 57.255 42.857 0.00 0.00 0.00 5.36
379 380 4.582240 CCTTATGAGAGAAAAAGATGGCCC 59.418 45.833 0.00 0.00 0.00 5.80
380 381 4.582240 CCCTTATGAGAGAAAAAGATGGCC 59.418 45.833 0.00 0.00 0.00 5.36
381 382 5.440610 TCCCTTATGAGAGAAAAAGATGGC 58.559 41.667 0.00 0.00 0.00 4.40
382 383 6.016443 GCATCCCTTATGAGAGAAAAAGATGG 60.016 42.308 0.00 0.00 37.86 3.51
383 384 6.771749 AGCATCCCTTATGAGAGAAAAAGATG 59.228 38.462 0.00 0.00 37.86 2.90
384 385 6.909076 AGCATCCCTTATGAGAGAAAAAGAT 58.091 36.000 0.00 0.00 37.86 2.40
385 386 6.319048 AGCATCCCTTATGAGAGAAAAAGA 57.681 37.500 0.00 0.00 37.86 2.52
386 387 7.504403 TCTAGCATCCCTTATGAGAGAAAAAG 58.496 38.462 0.00 0.00 37.86 2.27
387 388 7.437713 TCTAGCATCCCTTATGAGAGAAAAA 57.562 36.000 0.00 0.00 37.86 1.94
388 389 7.275920 GTTCTAGCATCCCTTATGAGAGAAAA 58.724 38.462 0.00 0.00 38.51 2.29
389 390 6.183361 GGTTCTAGCATCCCTTATGAGAGAAA 60.183 42.308 0.00 0.00 38.51 2.52
390 391 5.305644 GGTTCTAGCATCCCTTATGAGAGAA 59.694 44.000 0.00 0.00 37.86 2.87
391 392 4.835615 GGTTCTAGCATCCCTTATGAGAGA 59.164 45.833 0.00 0.00 37.86 3.10
392 393 4.020662 GGGTTCTAGCATCCCTTATGAGAG 60.021 50.000 8.73 0.00 37.86 3.20
393 394 3.904339 GGGTTCTAGCATCCCTTATGAGA 59.096 47.826 8.73 0.00 37.86 3.27
394 395 3.648067 TGGGTTCTAGCATCCCTTATGAG 59.352 47.826 14.58 0.00 41.58 2.90
395 396 3.664320 TGGGTTCTAGCATCCCTTATGA 58.336 45.455 14.58 0.00 41.58 2.15
396 397 4.647564 ATGGGTTCTAGCATCCCTTATG 57.352 45.455 14.58 0.00 41.58 1.90
397 398 6.748332 GCTTTATGGGTTCTAGCATCCCTTAT 60.748 42.308 14.58 6.55 41.58 1.73
398 399 5.456186 GCTTTATGGGTTCTAGCATCCCTTA 60.456 44.000 14.58 10.97 41.58 2.69
399 400 4.689983 GCTTTATGGGTTCTAGCATCCCTT 60.690 45.833 14.58 11.70 41.58 3.95
400 401 3.181439 GCTTTATGGGTTCTAGCATCCCT 60.181 47.826 14.58 0.00 41.58 4.20
401 402 3.149981 GCTTTATGGGTTCTAGCATCCC 58.850 50.000 8.97 8.97 41.41 3.85
402 403 3.817647 CAGCTTTATGGGTTCTAGCATCC 59.182 47.826 0.00 0.00 34.37 3.51
403 404 4.513318 GTCAGCTTTATGGGTTCTAGCATC 59.487 45.833 0.00 0.00 34.37 3.91
404 405 4.164988 AGTCAGCTTTATGGGTTCTAGCAT 59.835 41.667 0.00 0.00 34.37 3.79
405 406 3.519510 AGTCAGCTTTATGGGTTCTAGCA 59.480 43.478 0.00 0.00 34.37 3.49
406 407 3.873952 CAGTCAGCTTTATGGGTTCTAGC 59.126 47.826 0.00 0.00 0.00 3.42
407 408 5.091261 ACAGTCAGCTTTATGGGTTCTAG 57.909 43.478 0.00 0.00 0.00 2.43
408 409 6.614694 TTACAGTCAGCTTTATGGGTTCTA 57.385 37.500 0.00 0.00 0.00 2.10
409 410 5.499004 TTACAGTCAGCTTTATGGGTTCT 57.501 39.130 0.00 0.00 0.00 3.01
410 411 6.759497 ATTTACAGTCAGCTTTATGGGTTC 57.241 37.500 0.00 0.00 0.00 3.62
411 412 7.539034 AAATTTACAGTCAGCTTTATGGGTT 57.461 32.000 0.00 0.00 0.00 4.11
412 413 8.823220 ATAAATTTACAGTCAGCTTTATGGGT 57.177 30.769 0.00 0.00 0.00 4.51
418 419 9.297037 ACAGGTTATAAATTTACAGTCAGCTTT 57.703 29.630 0.00 0.00 0.00 3.51
419 420 8.863872 ACAGGTTATAAATTTACAGTCAGCTT 57.136 30.769 0.00 0.00 0.00 3.74
420 421 8.863872 AACAGGTTATAAATTTACAGTCAGCT 57.136 30.769 0.00 0.00 0.00 4.24
421 422 9.908152 AAAACAGGTTATAAATTTACAGTCAGC 57.092 29.630 0.00 0.00 0.00 4.26
433 434 9.074576 GGGAAGAGAAGAAAAACAGGTTATAAA 57.925 33.333 0.00 0.00 0.00 1.40
434 435 8.445588 AGGGAAGAGAAGAAAAACAGGTTATAA 58.554 33.333 0.00 0.00 0.00 0.98
435 436 7.985589 AGGGAAGAGAAGAAAAACAGGTTATA 58.014 34.615 0.00 0.00 0.00 0.98
436 437 6.853490 AGGGAAGAGAAGAAAAACAGGTTAT 58.147 36.000 0.00 0.00 0.00 1.89
437 438 6.101296 AGAGGGAAGAGAAGAAAAACAGGTTA 59.899 38.462 0.00 0.00 0.00 2.85
438 439 5.103898 AGAGGGAAGAGAAGAAAAACAGGTT 60.104 40.000 0.00 0.00 0.00 3.50
439 440 4.413851 AGAGGGAAGAGAAGAAAAACAGGT 59.586 41.667 0.00 0.00 0.00 4.00
440 441 4.979335 AGAGGGAAGAGAAGAAAAACAGG 58.021 43.478 0.00 0.00 0.00 4.00
441 442 6.428465 GGTTAGAGGGAAGAGAAGAAAAACAG 59.572 42.308 0.00 0.00 0.00 3.16
442 443 6.126594 TGGTTAGAGGGAAGAGAAGAAAAACA 60.127 38.462 0.00 0.00 0.00 2.83
443 444 6.296803 TGGTTAGAGGGAAGAGAAGAAAAAC 58.703 40.000 0.00 0.00 0.00 2.43
444 445 6.509523 TGGTTAGAGGGAAGAGAAGAAAAA 57.490 37.500 0.00 0.00 0.00 1.94
445 446 6.509523 TTGGTTAGAGGGAAGAGAAGAAAA 57.490 37.500 0.00 0.00 0.00 2.29
446 447 6.126594 TGTTTGGTTAGAGGGAAGAGAAGAAA 60.127 38.462 0.00 0.00 0.00 2.52
447 448 5.368523 TGTTTGGTTAGAGGGAAGAGAAGAA 59.631 40.000 0.00 0.00 0.00 2.52
448 449 4.905456 TGTTTGGTTAGAGGGAAGAGAAGA 59.095 41.667 0.00 0.00 0.00 2.87
449 450 5.228945 TGTTTGGTTAGAGGGAAGAGAAG 57.771 43.478 0.00 0.00 0.00 2.85
450 451 5.640158 TTGTTTGGTTAGAGGGAAGAGAA 57.360 39.130 0.00 0.00 0.00 2.87
451 452 5.640158 TTTGTTTGGTTAGAGGGAAGAGA 57.360 39.130 0.00 0.00 0.00 3.10
452 453 6.709018 TTTTTGTTTGGTTAGAGGGAAGAG 57.291 37.500 0.00 0.00 0.00 2.85
453 454 7.669089 AATTTTTGTTTGGTTAGAGGGAAGA 57.331 32.000 0.00 0.00 0.00 2.87
454 455 9.825109 TTAAATTTTTGTTTGGTTAGAGGGAAG 57.175 29.630 0.00 0.00 0.00 3.46
489 490 8.900781 GCACGGTGATATAGGTAATCTATAAGA 58.099 37.037 13.29 0.00 42.36 2.10
490 491 8.904834 AGCACGGTGATATAGGTAATCTATAAG 58.095 37.037 13.29 0.00 42.36 1.73
491 492 8.818622 AGCACGGTGATATAGGTAATCTATAA 57.181 34.615 13.29 0.00 42.36 0.98
493 494 8.998277 ATAGCACGGTGATATAGGTAATCTAT 57.002 34.615 16.62 4.32 41.31 1.98
495 496 8.998277 ATATAGCACGGTGATATAGGTAATCT 57.002 34.615 24.88 9.15 35.08 2.40
500 501 9.871238 CTAAAAATATAGCACGGTGATATAGGT 57.129 33.333 24.88 15.69 35.08 3.08
501 502 9.871238 ACTAAAAATATAGCACGGTGATATAGG 57.129 33.333 24.88 14.94 35.08 2.57
527 528 9.764870 GCGTTCAGTTCTTACGATATATACATA 57.235 33.333 0.00 0.00 37.47 2.29
528 529 8.294577 TGCGTTCAGTTCTTACGATATATACAT 58.705 33.333 0.00 0.00 37.47 2.29
529 530 7.641760 TGCGTTCAGTTCTTACGATATATACA 58.358 34.615 0.00 0.00 37.47 2.29
530 531 8.670804 ATGCGTTCAGTTCTTACGATATATAC 57.329 34.615 0.00 0.00 37.47 1.47
532 533 9.504710 GATATGCGTTCAGTTCTTACGATATAT 57.495 33.333 0.00 0.00 37.47 0.86
533 534 8.508875 TGATATGCGTTCAGTTCTTACGATATA 58.491 33.333 0.00 0.00 37.47 0.86
534 535 7.368059 TGATATGCGTTCAGTTCTTACGATAT 58.632 34.615 0.00 0.00 37.47 1.63
535 536 6.731164 TGATATGCGTTCAGTTCTTACGATA 58.269 36.000 0.00 0.00 37.47 2.92
536 537 5.588240 TGATATGCGTTCAGTTCTTACGAT 58.412 37.500 0.00 0.00 37.47 3.73
537 538 4.989044 TGATATGCGTTCAGTTCTTACGA 58.011 39.130 0.00 0.00 37.47 3.43
538 539 5.890110 ATGATATGCGTTCAGTTCTTACG 57.110 39.130 0.00 0.00 38.26 3.18
539 540 7.234187 TCAATGATATGCGTTCAGTTCTTAC 57.766 36.000 0.00 0.00 0.00 2.34
540 541 7.841915 TTCAATGATATGCGTTCAGTTCTTA 57.158 32.000 0.00 0.00 0.00 2.10
541 542 6.741992 TTCAATGATATGCGTTCAGTTCTT 57.258 33.333 0.00 0.00 0.00 2.52
542 543 6.741992 TTTCAATGATATGCGTTCAGTTCT 57.258 33.333 0.00 0.00 0.00 3.01
543 544 7.023575 ACTTTTCAATGATATGCGTTCAGTTC 58.976 34.615 0.00 0.00 0.00 3.01
544 545 6.913170 ACTTTTCAATGATATGCGTTCAGTT 58.087 32.000 0.00 0.00 0.00 3.16
545 546 6.500684 ACTTTTCAATGATATGCGTTCAGT 57.499 33.333 0.00 0.00 0.00 3.41
582 583 6.435430 TGATGCTAGTGTTCGCATATTTTT 57.565 33.333 0.00 0.00 46.06 1.94
583 584 6.094048 ACTTGATGCTAGTGTTCGCATATTTT 59.906 34.615 0.00 0.00 46.06 1.82
584 585 5.586243 ACTTGATGCTAGTGTTCGCATATTT 59.414 36.000 0.00 0.00 46.06 1.40
585 586 5.118990 ACTTGATGCTAGTGTTCGCATATT 58.881 37.500 0.00 0.00 46.06 1.28
586 587 4.697514 ACTTGATGCTAGTGTTCGCATAT 58.302 39.130 0.00 0.00 46.06 1.78
587 588 4.112634 GACTTGATGCTAGTGTTCGCATA 58.887 43.478 0.00 0.00 46.06 3.14
589 590 2.029020 AGACTTGATGCTAGTGTTCGCA 60.029 45.455 0.00 0.00 40.87 5.10
590 591 2.611518 AGACTTGATGCTAGTGTTCGC 58.388 47.619 0.00 0.00 0.00 4.70
591 592 3.794028 GCTAGACTTGATGCTAGTGTTCG 59.206 47.826 0.00 0.00 37.13 3.95
592 593 4.564769 GTGCTAGACTTGATGCTAGTGTTC 59.435 45.833 0.00 0.00 37.13 3.18
593 594 4.221703 AGTGCTAGACTTGATGCTAGTGTT 59.778 41.667 0.00 0.00 37.13 3.32
594 595 3.766591 AGTGCTAGACTTGATGCTAGTGT 59.233 43.478 0.00 0.00 37.13 3.55
595 596 4.383850 AGTGCTAGACTTGATGCTAGTG 57.616 45.455 0.00 0.00 37.13 2.74
596 597 6.531503 TTAAGTGCTAGACTTGATGCTAGT 57.468 37.500 14.24 0.00 45.05 2.57
597 598 7.925483 AGATTTAAGTGCTAGACTTGATGCTAG 59.075 37.037 14.24 0.00 45.05 3.42
598 599 7.786030 AGATTTAAGTGCTAGACTTGATGCTA 58.214 34.615 14.24 0.00 45.05 3.49
599 600 6.648192 AGATTTAAGTGCTAGACTTGATGCT 58.352 36.000 14.24 6.85 45.05 3.79
600 601 6.917217 AGATTTAAGTGCTAGACTTGATGC 57.083 37.500 14.24 0.00 45.05 3.91
601 602 8.484641 TCAAGATTTAAGTGCTAGACTTGATG 57.515 34.615 14.24 5.48 45.05 3.07
603 604 8.314021 TCATCAAGATTTAAGTGCTAGACTTGA 58.686 33.333 14.24 0.00 45.05 3.02
604 605 8.484641 TCATCAAGATTTAAGTGCTAGACTTG 57.515 34.615 14.24 0.00 45.05 3.16
606 607 6.760770 GCTCATCAAGATTTAAGTGCTAGACT 59.239 38.462 0.00 0.00 35.94 3.24
607 608 6.760770 AGCTCATCAAGATTTAAGTGCTAGAC 59.239 38.462 0.00 0.00 0.00 2.59
608 609 6.760298 CAGCTCATCAAGATTTAAGTGCTAGA 59.240 38.462 0.00 0.00 0.00 2.43
609 610 6.760298 TCAGCTCATCAAGATTTAAGTGCTAG 59.240 38.462 0.00 0.00 0.00 3.42
610 611 6.643388 TCAGCTCATCAAGATTTAAGTGCTA 58.357 36.000 0.00 0.00 0.00 3.49
611 612 5.494724 TCAGCTCATCAAGATTTAAGTGCT 58.505 37.500 0.00 0.00 0.00 4.40
612 613 5.808042 TCAGCTCATCAAGATTTAAGTGC 57.192 39.130 0.00 0.00 0.00 4.40
613 614 8.659925 ACTATCAGCTCATCAAGATTTAAGTG 57.340 34.615 0.00 0.00 0.00 3.16
614 615 9.757227 GTACTATCAGCTCATCAAGATTTAAGT 57.243 33.333 0.00 0.00 0.00 2.24
615 616 9.979578 AGTACTATCAGCTCATCAAGATTTAAG 57.020 33.333 0.00 0.00 0.00 1.85
618 619 9.142014 ACTAGTACTATCAGCTCATCAAGATTT 57.858 33.333 2.33 0.00 0.00 2.17
619 620 8.704849 ACTAGTACTATCAGCTCATCAAGATT 57.295 34.615 2.33 0.00 0.00 2.40
620 621 9.226606 GTACTAGTACTATCAGCTCATCAAGAT 57.773 37.037 23.17 0.00 33.45 2.40
621 622 7.662258 GGTACTAGTACTATCAGCTCATCAAGA 59.338 40.741 27.71 0.00 36.36 3.02
622 623 7.445707 TGGTACTAGTACTATCAGCTCATCAAG 59.554 40.741 27.71 0.00 36.36 3.02
623 624 7.228906 GTGGTACTAGTACTATCAGCTCATCAA 59.771 40.741 27.71 0.00 36.36 2.57
624 625 6.711194 GTGGTACTAGTACTATCAGCTCATCA 59.289 42.308 27.71 12.85 36.36 3.07
625 626 6.938030 AGTGGTACTAGTACTATCAGCTCATC 59.062 42.308 27.71 10.40 36.36 2.92
626 627 6.712998 CAGTGGTACTAGTACTATCAGCTCAT 59.287 42.308 27.71 6.81 36.36 2.90
627 628 6.056236 CAGTGGTACTAGTACTATCAGCTCA 58.944 44.000 27.71 14.52 36.36 4.26
628 629 5.049267 GCAGTGGTACTAGTACTATCAGCTC 60.049 48.000 27.71 12.26 36.36 4.09
629 630 4.822896 GCAGTGGTACTAGTACTATCAGCT 59.177 45.833 27.71 15.00 36.36 4.24
630 631 4.319622 CGCAGTGGTACTAGTACTATCAGC 60.320 50.000 27.71 23.54 36.36 4.26
631 632 4.213694 CCGCAGTGGTACTAGTACTATCAG 59.786 50.000 27.71 17.79 36.36 2.90
632 633 4.132336 CCGCAGTGGTACTAGTACTATCA 58.868 47.826 27.71 17.02 36.36 2.15
633 634 4.745837 CCGCAGTGGTACTAGTACTATC 57.254 50.000 27.71 17.72 36.36 2.08
648 649 1.600636 CACCCATGAACACCGCAGT 60.601 57.895 0.00 0.00 0.00 4.40
649 650 1.300971 CTCACCCATGAACACCGCAG 61.301 60.000 0.00 0.00 33.30 5.18
650 651 1.302431 CTCACCCATGAACACCGCA 60.302 57.895 0.00 0.00 33.30 5.69
651 652 0.036765 TACTCACCCATGAACACCGC 60.037 55.000 0.00 0.00 33.30 5.68
652 653 2.007049 GCTACTCACCCATGAACACCG 61.007 57.143 0.00 0.00 33.30 4.94
653 654 1.739067 GCTACTCACCCATGAACACC 58.261 55.000 0.00 0.00 33.30 4.16
654 655 1.337823 ACGCTACTCACCCATGAACAC 60.338 52.381 0.00 0.00 33.30 3.32
655 656 0.973632 ACGCTACTCACCCATGAACA 59.026 50.000 0.00 0.00 33.30 3.18
656 657 2.000447 GAACGCTACTCACCCATGAAC 59.000 52.381 0.00 0.00 33.30 3.18
657 658 1.403647 CGAACGCTACTCACCCATGAA 60.404 52.381 0.00 0.00 33.30 2.57
658 659 0.172578 CGAACGCTACTCACCCATGA 59.827 55.000 0.00 0.00 0.00 3.07
659 660 1.421410 GCGAACGCTACTCACCCATG 61.421 60.000 11.97 0.00 38.26 3.66
660 661 1.153628 GCGAACGCTACTCACCCAT 60.154 57.895 11.97 0.00 38.26 4.00
661 662 2.260434 GCGAACGCTACTCACCCA 59.740 61.111 11.97 0.00 38.26 4.51
662 663 2.879462 CGCGAACGCTACTCACCC 60.879 66.667 16.66 0.00 39.32 4.61
663 664 2.126580 ACGCGAACGCTACTCACC 60.127 61.111 15.93 0.00 45.53 4.02
664 665 2.150837 GGACGCGAACGCTACTCAC 61.151 63.158 15.93 2.62 45.53 3.51
665 666 2.177531 GGACGCGAACGCTACTCA 59.822 61.111 15.93 0.00 45.53 3.41
666 667 2.296692 TACGGACGCGAACGCTACTC 62.297 60.000 15.93 0.00 45.53 2.59
667 668 2.390599 TACGGACGCGAACGCTACT 61.391 57.895 15.93 3.18 45.53 2.57
668 669 2.098298 TACGGACGCGAACGCTAC 59.902 61.111 15.93 10.03 45.53 3.58
669 670 2.098298 GTACGGACGCGAACGCTA 59.902 61.111 15.93 8.94 45.53 4.26
670 671 3.730761 AGTACGGACGCGAACGCT 61.731 61.111 15.93 7.30 45.53 5.07
671 672 3.530104 CAGTACGGACGCGAACGC 61.530 66.667 15.93 9.20 45.53 4.84
673 674 0.110238 TACACAGTACGGACGCGAAC 60.110 55.000 15.93 6.28 0.00 3.95
674 675 0.590682 TTACACAGTACGGACGCGAA 59.409 50.000 15.93 0.00 0.00 4.70
675 676 0.590682 TTTACACAGTACGGACGCGA 59.409 50.000 15.93 0.00 0.00 5.87
676 677 0.979811 CTTTACACAGTACGGACGCG 59.020 55.000 3.53 3.53 0.00 6.01
677 678 2.056094 ACTTTACACAGTACGGACGC 57.944 50.000 0.00 0.00 0.00 5.19
678 679 5.215160 AGTTTACTTTACACAGTACGGACG 58.785 41.667 0.00 0.00 0.00 4.79
679 680 5.340667 CGAGTTTACTTTACACAGTACGGAC 59.659 44.000 0.00 0.00 0.00 4.79
680 681 5.008613 ACGAGTTTACTTTACACAGTACGGA 59.991 40.000 0.00 0.00 0.00 4.69
681 682 5.215160 ACGAGTTTACTTTACACAGTACGG 58.785 41.667 0.00 0.00 0.00 4.02
682 683 7.959651 AGATACGAGTTTACTTTACACAGTACG 59.040 37.037 0.00 0.00 0.00 3.67
683 684 9.271738 GAGATACGAGTTTACTTTACACAGTAC 57.728 37.037 0.00 0.00 0.00 2.73
684 685 9.224267 AGAGATACGAGTTTACTTTACACAGTA 57.776 33.333 0.00 0.00 0.00 2.74
685 686 8.108551 AGAGATACGAGTTTACTTTACACAGT 57.891 34.615 0.00 0.00 0.00 3.55
688 689 9.662545 GGATAGAGATACGAGTTTACTTTACAC 57.337 37.037 0.00 0.00 0.00 2.90
689 690 8.844244 GGGATAGAGATACGAGTTTACTTTACA 58.156 37.037 0.00 0.00 0.00 2.41
690 691 9.065798 AGGGATAGAGATACGAGTTTACTTTAC 57.934 37.037 0.00 0.00 0.00 2.01
691 692 9.282569 GAGGGATAGAGATACGAGTTTACTTTA 57.717 37.037 0.00 0.00 0.00 1.85
692 693 7.231115 GGAGGGATAGAGATACGAGTTTACTTT 59.769 40.741 0.00 0.00 0.00 2.66
693 694 6.716173 GGAGGGATAGAGATACGAGTTTACTT 59.284 42.308 0.00 0.00 0.00 2.24
694 695 6.240145 GGAGGGATAGAGATACGAGTTTACT 58.760 44.000 0.00 0.00 0.00 2.24
695 696 5.415389 GGGAGGGATAGAGATACGAGTTTAC 59.585 48.000 0.00 0.00 0.00 2.01
696 697 5.074102 TGGGAGGGATAGAGATACGAGTTTA 59.926 44.000 0.00 0.00 0.00 2.01
704 705 2.445905 ACACGTGGGAGGGATAGAGATA 59.554 50.000 21.57 0.00 0.00 1.98
711 712 2.121832 TGGACACGTGGGAGGGAT 59.878 61.111 21.57 0.00 0.00 3.85
780 781 0.987294 CAGGAGAAGCTTCCAGGGAA 59.013 55.000 22.81 0.09 39.84 3.97
812 813 2.247358 GGATTGTTGCTGGGGAAAAGA 58.753 47.619 0.00 0.00 0.00 2.52
856 859 1.502527 TTAGGGGTTGGAATGGCCGT 61.503 55.000 0.00 0.00 40.66 5.68
870 873 2.158519 GGATTGGTGTGGGGTATTAGGG 60.159 54.545 0.00 0.00 0.00 3.53
873 876 3.714798 GAGAGGATTGGTGTGGGGTATTA 59.285 47.826 0.00 0.00 0.00 0.98
876 879 1.580059 GAGAGGATTGGTGTGGGGTA 58.420 55.000 0.00 0.00 0.00 3.69
884 887 0.046242 TGATGGGGGAGAGGATTGGT 59.954 55.000 0.00 0.00 0.00 3.67
888 891 1.849039 CTGTTTGATGGGGGAGAGGAT 59.151 52.381 0.00 0.00 0.00 3.24
889 892 1.289160 CTGTTTGATGGGGGAGAGGA 58.711 55.000 0.00 0.00 0.00 3.71
890 893 0.394899 GCTGTTTGATGGGGGAGAGG 60.395 60.000 0.00 0.00 0.00 3.69
892 895 0.620556 GAGCTGTTTGATGGGGGAGA 59.379 55.000 0.00 0.00 0.00 3.71
894 897 0.620556 GAGAGCTGTTTGATGGGGGA 59.379 55.000 0.00 0.00 0.00 4.81
895 898 0.745845 CGAGAGCTGTTTGATGGGGG 60.746 60.000 0.00 0.00 0.00 5.40
950 962 3.234730 GATCTGCGGGGGTCGGAT 61.235 66.667 0.00 0.00 38.83 4.18
1134 1149 3.343788 GAGCTGGGACACGACGAGG 62.344 68.421 0.00 0.00 0.00 4.63
1390 1410 2.260743 GCAAGGAGCAGCAAAGCC 59.739 61.111 0.00 0.00 44.79 4.35
1400 1427 3.462021 GCATTACAGTAGGAGCAAGGAG 58.538 50.000 0.00 0.00 0.00 3.69
1591 1618 0.108615 AAGGAGTCGCGATTCACCAG 60.109 55.000 29.25 0.00 0.00 4.00
1605 1632 3.648067 TCTGCCACCCATAGAATAAGGAG 59.352 47.826 0.00 0.00 28.83 3.69
1613 1643 0.181114 GCACATCTGCCACCCATAGA 59.819 55.000 0.00 0.00 37.45 1.98
1654 1685 3.220110 CTGAATCATACAATGCCCTGCT 58.780 45.455 0.00 0.00 0.00 4.24
1671 1702 2.032528 CTCAAGCCACCGCCTGAA 59.967 61.111 0.00 0.00 35.04 3.02
1712 1743 1.153086 CAATTCCCTGGCCTCCTCG 60.153 63.158 3.32 0.00 0.00 4.63
1887 1918 8.557450 AGTATCCATATAAACAAGGTCAGGTTT 58.443 33.333 0.00 0.00 40.15 3.27
1888 1919 8.102484 AGTATCCATATAAACAAGGTCAGGTT 57.898 34.615 0.00 0.00 0.00 3.50
1943 1974 0.105039 GCAACCAGGCGCTAGTCTAT 59.895 55.000 7.64 0.00 0.00 1.98
1953 1984 4.261363 GCTCTTCTAAATATGCAACCAGGC 60.261 45.833 0.00 0.00 0.00 4.85
2095 2126 8.511604 AGTCGACCATCAATAATTGAGAATTT 57.488 30.769 13.01 0.00 43.98 1.82
2161 2193 0.738389 ACAGGCAAACCAAACTGTCG 59.262 50.000 0.00 0.00 39.84 4.35
2190 2222 8.059798 AGATTAACAAAAGTGCAATCAGCTAT 57.940 30.769 0.00 0.00 45.94 2.97
2256 2288 0.515127 TTCGCAATGTCGAACGCAAT 59.485 45.000 8.05 0.00 42.68 3.56
2333 2365 9.757227 TTGAAAAACTAACCAGGATATTTTGTG 57.243 29.630 0.00 0.00 0.00 3.33
2462 2494 3.118112 AGAAATCTCCGCTGTTCATCCAT 60.118 43.478 0.00 0.00 0.00 3.41
2615 2647 3.445096 GGAAGCATTTAGGAACAGCACAT 59.555 43.478 0.00 0.00 0.00 3.21
2829 2861 3.381908 GCAGAGATAGAGGAAGAACCGAA 59.618 47.826 0.00 0.00 44.74 4.30
2956 2988 1.028330 CCGCATGATCAGCTGGTTGT 61.028 55.000 15.13 0.00 0.00 3.32
2975 3007 6.037172 TGCTATAAGAAAAAGAACGAGCCATC 59.963 38.462 0.00 0.00 0.00 3.51
3008 3045 1.134965 CCACAAAGCTACTCGAGAGGG 60.135 57.143 21.68 9.40 37.84 4.30
3070 3107 5.651139 TCAACTACTAGCCTAAACGATCTGT 59.349 40.000 0.00 0.00 0.00 3.41
3073 3110 5.280164 GGTCAACTACTAGCCTAAACGATC 58.720 45.833 0.00 0.00 0.00 3.69
3164 3204 2.351726 GGACATGAACGATGTAACAGGC 59.648 50.000 0.00 0.00 45.90 4.85
3217 3257 3.376234 CAGGGTTCACAGCACAATATCTG 59.624 47.826 0.00 0.00 36.45 2.90
3273 3313 1.078214 TGAGAAAGGGCAGATGCGG 60.078 57.895 0.00 0.00 43.26 5.69
3274 3314 1.372087 GGTGAGAAAGGGCAGATGCG 61.372 60.000 0.00 0.00 43.26 4.73
3275 3315 1.372087 CGGTGAGAAAGGGCAGATGC 61.372 60.000 0.00 0.00 41.14 3.91
3276 3316 0.745845 CCGGTGAGAAAGGGCAGATG 60.746 60.000 0.00 0.00 0.00 2.90
3277 3317 0.909610 TCCGGTGAGAAAGGGCAGAT 60.910 55.000 0.00 0.00 0.00 2.90
3278 3318 0.909610 ATCCGGTGAGAAAGGGCAGA 60.910 55.000 0.00 0.00 0.00 4.26
3279 3319 0.745845 CATCCGGTGAGAAAGGGCAG 60.746 60.000 0.00 0.00 0.00 4.85
3280 3320 1.299648 CATCCGGTGAGAAAGGGCA 59.700 57.895 0.00 0.00 0.00 5.36
3282 3322 1.815421 CGCATCCGGTGAGAAAGGG 60.815 63.158 0.00 0.00 0.00 3.95
3285 3373 1.206132 ACATACGCATCCGGTGAGAAA 59.794 47.619 13.01 3.53 39.22 2.52
3331 3419 2.974698 GCAGCTTCACGCACCACT 60.975 61.111 0.00 0.00 42.61 4.00
3338 3426 4.099170 GCCTGCAGCAGCTTCACG 62.099 66.667 17.81 3.22 42.97 4.35
3383 3473 2.693074 GTCAGGAAAAAGAACAGGCCAA 59.307 45.455 5.01 0.00 0.00 4.52
3386 3476 1.947456 ACGTCAGGAAAAAGAACAGGC 59.053 47.619 0.00 0.00 0.00 4.85
3422 3520 6.217294 GTCTTAACATGGGCTGTACTAGATC 58.783 44.000 0.00 0.00 36.98 2.75
3423 3521 5.221263 CGTCTTAACATGGGCTGTACTAGAT 60.221 44.000 0.00 0.00 36.98 1.98
3425 3523 4.360563 CGTCTTAACATGGGCTGTACTAG 58.639 47.826 0.00 0.00 36.98 2.57
3426 3524 3.131577 CCGTCTTAACATGGGCTGTACTA 59.868 47.826 0.00 0.00 36.98 1.82
3427 3525 2.093658 CCGTCTTAACATGGGCTGTACT 60.094 50.000 0.00 0.00 36.98 2.73
3428 3526 2.093869 TCCGTCTTAACATGGGCTGTAC 60.094 50.000 0.00 0.00 36.98 2.90
3429 3527 2.181125 TCCGTCTTAACATGGGCTGTA 58.819 47.619 0.00 0.00 36.98 2.74
3430 3528 0.981183 TCCGTCTTAACATGGGCTGT 59.019 50.000 0.00 0.00 40.84 4.40
3431 3529 2.009774 CTTCCGTCTTAACATGGGCTG 58.990 52.381 0.00 0.00 0.00 4.85
3432 3530 1.679032 GCTTCCGTCTTAACATGGGCT 60.679 52.381 0.00 0.00 0.00 5.19
3433 3531 0.733150 GCTTCCGTCTTAACATGGGC 59.267 55.000 0.00 0.00 0.00 5.36
3465 3878 0.392193 ATTTCGAGCTGAGGCCACAG 60.392 55.000 24.36 24.36 39.73 3.66
3479 3895 3.187478 ACGCACTGATGAAACATTTCG 57.813 42.857 0.18 0.00 40.01 3.46
3486 3902 4.627058 TGTCTCTTTACGCACTGATGAAA 58.373 39.130 0.00 0.00 0.00 2.69
3488 3904 3.934457 TGTCTCTTTACGCACTGATGA 57.066 42.857 0.00 0.00 0.00 2.92
3489 3905 4.627035 TCATTGTCTCTTTACGCACTGATG 59.373 41.667 0.00 0.00 0.00 3.07
3490 3906 4.820897 TCATTGTCTCTTTACGCACTGAT 58.179 39.130 0.00 0.00 0.00 2.90
3491 3907 4.237724 CTCATTGTCTCTTTACGCACTGA 58.762 43.478 0.00 0.00 0.00 3.41
3503 3919 1.067565 TGCCTCGTGACTCATTGTCTC 60.068 52.381 0.00 0.00 45.54 3.36
3505 3921 2.015736 ATGCCTCGTGACTCATTGTC 57.984 50.000 0.00 0.00 45.54 3.18
3506 3922 3.610040 TTATGCCTCGTGACTCATTGT 57.390 42.857 0.00 0.00 0.00 2.71
3513 3929 3.424962 GCTCAGTTTTTATGCCTCGTGAC 60.425 47.826 0.00 0.00 0.00 3.67
3623 4041 6.493449 TGTGAATTCGCTCAACAAATGATA 57.507 33.333 19.21 0.00 37.44 2.15
3626 4044 4.325204 CCATGTGAATTCGCTCAACAAATG 59.675 41.667 19.21 12.04 0.00 2.32
3640 4058 2.292267 GGTGCGAAGATCCATGTGAAT 58.708 47.619 0.00 0.00 0.00 2.57
3641 4059 1.678728 GGGTGCGAAGATCCATGTGAA 60.679 52.381 0.00 0.00 0.00 3.18
3671 4089 4.453136 GCATTTTTGCAAATCACCTGTGAT 59.547 37.500 13.65 6.96 42.17 3.06
3681 4099 3.456280 ACACAGTCGCATTTTTGCAAAT 58.544 36.364 13.65 0.00 32.36 2.32
3685 4103 3.551485 AGAAAACACAGTCGCATTTTTGC 59.449 39.130 0.00 0.00 0.00 3.68
3713 4132 9.315525 GAGAGTTACCAGAATACAATTTACTCC 57.684 37.037 0.00 0.00 31.14 3.85
3742 4161 2.416547 CTCATTTGTACGGCCACTCAAG 59.583 50.000 2.24 0.00 0.00 3.02
3795 4214 3.704231 CTGCCGCTGTTGCCCCTAT 62.704 63.158 0.00 0.00 35.36 2.57
3832 4251 2.887568 CACATCGCACCCTCTCGC 60.888 66.667 0.00 0.00 0.00 5.03



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.