Multiple sequence alignment - TraesCS3A01G113500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G113500 chr3A 100.000 2543 0 0 1 2543 80687906 80685364 0.000000e+00 4697.0
1 TraesCS3A01G113500 chr3A 88.312 231 24 3 1918 2147 365823460 365823232 8.960000e-70 274.0
2 TraesCS3A01G113500 chr3A 87.931 232 27 1 1918 2148 634671943 634672174 3.220000e-69 272.0
3 TraesCS3A01G113500 chr3A 90.083 121 11 1 2308 2427 686909966 686910086 3.390000e-34 156.0
4 TraesCS3A01G113500 chr3A 88.525 122 13 1 2308 2428 597168430 597168551 2.040000e-31 147.0
5 TraesCS3A01G113500 chr3A 85.345 116 16 1 2313 2427 471354910 471355025 4.440000e-23 119.0
6 TraesCS3A01G113500 chr3A 93.243 74 4 1 2308 2380 629287940 629288013 9.620000e-20 108.0
7 TraesCS3A01G113500 chr3A 91.892 74 5 1 2308 2380 369525325 369525252 4.480000e-18 102.0
8 TraesCS3A01G113500 chr3D 92.600 1919 109 24 3 1900 69499220 69497314 0.000000e+00 2726.0
9 TraesCS3A01G113500 chr3D 88.841 233 21 5 1918 2149 524772522 524772750 5.360000e-72 281.0
10 TraesCS3A01G113500 chr3B 90.192 1927 117 45 6 1893 115396764 115394871 0.000000e+00 2446.0
11 TraesCS3A01G113500 chr3B 88.889 63 6 1 2369 2431 180885358 180885297 2.710000e-10 76.8
12 TraesCS3A01G113500 chr6A 90.909 231 20 1 1918 2147 28564075 28563845 2.460000e-80 309.0
13 TraesCS3A01G113500 chr6A 90.870 230 19 2 1918 2146 411145294 411145066 8.840000e-80 307.0
14 TraesCS3A01G113500 chr6A 89.655 232 23 1 1918 2148 9493572 9493341 6.880000e-76 294.0
15 TraesCS3A01G113500 chr6A 86.207 116 14 2 2314 2427 106716587 106716472 9.550000e-25 124.0
16 TraesCS3A01G113500 chr5A 91.743 218 17 1 1918 2134 167118765 167118982 4.110000e-78 302.0
17 TraesCS3A01G113500 chr5A 90.083 121 11 1 2308 2427 552521374 552521494 3.390000e-34 156.0
18 TraesCS3A01G113500 chr4A 89.224 232 23 2 1918 2148 452073729 452073499 3.200000e-74 289.0
19 TraesCS3A01G113500 chr2B 89.224 232 23 2 1918 2148 95502596 95502366 3.200000e-74 289.0
20 TraesCS3A01G113500 chr2A 92.241 116 8 1 2308 2422 610226712 610226597 2.020000e-36 163.0
21 TraesCS3A01G113500 chr2A 88.430 121 13 1 2308 2427 778637341 778637221 7.330000e-31 145.0
22 TraesCS3A01G113500 chr6B 86.667 105 13 1 2186 2290 30452807 30452910 5.750000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G113500 chr3A 80685364 80687906 2542 True 4697 4697 100.000 1 2543 1 chr3A.!!$R1 2542
1 TraesCS3A01G113500 chr3D 69497314 69499220 1906 True 2726 2726 92.600 3 1900 1 chr3D.!!$R1 1897
2 TraesCS3A01G113500 chr3B 115394871 115396764 1893 True 2446 2446 90.192 6 1893 1 chr3B.!!$R1 1887

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 978 0.332972 ATTCCCCACTTTCTCAGGCC 59.667 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2431 2484 0.107312 ATGGTGGCATGACTCTCTGC 60.107 55.0 0.0 0.0 37.66 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.756727 GAGACCCCGTCCGGACAC 61.757 72.222 32.80 17.58 37.50 3.67
244 245 1.282570 CATGTGCGCGTTCAACCTT 59.717 52.632 8.43 0.00 0.00 3.50
250 251 1.868997 CGCGTTCAACCTTGAGCAT 59.131 52.632 0.00 0.00 38.17 3.79
373 374 6.540551 GGTTAATCCCTTCTCTGAAGTGATTC 59.459 42.308 16.84 7.85 0.00 2.52
415 416 4.042560 ACTGGCGTGTACCTATATCCTAGA 59.957 45.833 0.00 0.00 0.00 2.43
432 433 3.119209 CCTAGAAACCGGTACTCTGAACC 60.119 52.174 23.20 1.44 0.00 3.62
433 434 2.322658 AGAAACCGGTACTCTGAACCA 58.677 47.619 8.00 0.00 36.78 3.67
435 436 1.713297 AACCGGTACTCTGAACCACT 58.287 50.000 8.00 0.00 36.78 4.00
438 439 2.560105 ACCGGTACTCTGAACCACTTAC 59.440 50.000 4.49 0.00 36.78 2.34
439 440 2.415090 CCGGTACTCTGAACCACTTACG 60.415 54.545 0.00 0.00 36.78 3.18
442 443 4.095483 CGGTACTCTGAACCACTTACGTAT 59.905 45.833 0.00 0.00 36.78 3.06
443 444 5.294306 CGGTACTCTGAACCACTTACGTATA 59.706 44.000 0.00 0.00 36.78 1.47
446 447 6.830873 ACTCTGAACCACTTACGTATAACT 57.169 37.500 0.00 0.00 0.00 2.24
447 448 7.928307 ACTCTGAACCACTTACGTATAACTA 57.072 36.000 0.00 0.00 0.00 2.24
448 449 7.983307 ACTCTGAACCACTTACGTATAACTAG 58.017 38.462 0.00 0.00 0.00 2.57
540 544 1.608822 GTCGTTGCGTGTGTTTGTTT 58.391 45.000 0.00 0.00 0.00 2.83
542 546 1.979469 TCGTTGCGTGTGTTTGTTTTG 59.021 42.857 0.00 0.00 0.00 2.44
593 600 8.524487 TGTGTTTTTGGACAAAGTTGTATTACT 58.476 29.630 0.00 0.00 42.43 2.24
607 614 5.687166 TGTATTACTAGTCCTGGGTTTGG 57.313 43.478 0.00 0.00 0.00 3.28
653 662 3.003068 GCCAGTGACACATGCAGAATATC 59.997 47.826 8.59 0.00 0.00 1.63
697 709 1.814394 GACATGAGCAGTGCATTTCCA 59.186 47.619 19.20 7.22 0.00 3.53
751 763 3.976169 TGGTTTCTTGCGAATTTGGAAG 58.024 40.909 18.38 18.38 38.51 3.46
781 793 2.275318 CTCGGTCAGGAATTCAGAAGC 58.725 52.381 7.93 0.44 0.00 3.86
791 803 2.568623 ATTCAGAAGCCGGAAGTGTT 57.431 45.000 5.05 0.00 30.42 3.32
793 805 0.884704 TCAGAAGCCGGAAGTGTTGC 60.885 55.000 5.05 0.00 0.00 4.17
798 810 2.280524 CCGGAAGTGTTGCCGTGA 60.281 61.111 0.00 0.00 45.85 4.35
799 811 2.317609 CCGGAAGTGTTGCCGTGAG 61.318 63.158 0.00 0.00 45.85 3.51
834 850 1.814248 GCCGATTATCCCCGCTTCTTT 60.814 52.381 0.00 0.00 0.00 2.52
835 851 2.143925 CCGATTATCCCCGCTTCTTTC 58.856 52.381 0.00 0.00 0.00 2.62
836 852 2.143925 CGATTATCCCCGCTTCTTTCC 58.856 52.381 0.00 0.00 0.00 3.13
921 943 0.669318 GAGATCAACCCAACGCGTCA 60.669 55.000 14.44 0.00 0.00 4.35
956 978 0.332972 ATTCCCCACTTTCTCAGGCC 59.667 55.000 0.00 0.00 0.00 5.19
984 1008 2.279120 CACCAGCTCGATCTCGCC 60.279 66.667 0.00 0.00 39.60 5.54
1213 1258 4.253257 GGAGCCTCGCCTACGTCG 62.253 72.222 0.00 0.00 41.18 5.12
1269 1314 2.186384 CTCGGGAAGCTGAGCCTG 59.814 66.667 0.00 0.00 0.00 4.85
1362 1407 3.115892 TTCGCCAACGTCATCGCC 61.116 61.111 0.00 0.00 41.18 5.54
1459 1504 3.172824 GTCGCCTTCTACTTCTTCTTCG 58.827 50.000 0.00 0.00 0.00 3.79
1709 1761 2.737376 GACGACGTGCTGGGGTTC 60.737 66.667 4.58 0.00 0.00 3.62
1734 1786 1.768684 AATCACTGACGTGTGGGGCT 61.769 55.000 0.00 0.00 41.89 5.19
1737 1789 4.624364 CTGACGTGTGGGGCTGCA 62.624 66.667 0.50 0.00 0.00 4.41
1740 1792 2.203480 ACGTGTGGGGCTGCAAAT 60.203 55.556 0.50 0.00 0.00 2.32
1762 1814 1.973281 CTGGCCCGCATGTCAGTTT 60.973 57.895 0.00 0.00 0.00 2.66
1763 1815 1.526575 CTGGCCCGCATGTCAGTTTT 61.527 55.000 0.00 0.00 0.00 2.43
1769 1821 3.331150 CCCGCATGTCAGTTTTACACTA 58.669 45.455 0.00 0.00 32.76 2.74
1785 1837 1.347707 CACTAGGTCACCTCAGCCAAA 59.652 52.381 0.00 0.00 34.61 3.28
1827 1879 7.179410 GGTGTAACATTTGTTTTCTTTTGCTG 58.821 34.615 0.63 0.00 39.98 4.41
1844 1897 1.862827 GCTGTAAAGTTTGACCGACGT 59.137 47.619 0.00 0.00 0.00 4.34
1845 1898 2.348218 GCTGTAAAGTTTGACCGACGTG 60.348 50.000 0.00 0.00 0.00 4.49
1886 1939 3.678072 TCTTCGTACTGCTGATTTTTCGG 59.322 43.478 0.00 0.00 0.00 4.30
1890 1943 0.238289 ACTGCTGATTTTTCGGTGCG 59.762 50.000 0.00 0.00 0.00 5.34
1893 1946 1.874231 TGCTGATTTTTCGGTGCGTTA 59.126 42.857 0.00 0.00 0.00 3.18
1897 1950 4.578601 CTGATTTTTCGGTGCGTTATCTC 58.421 43.478 0.00 0.00 0.00 2.75
1900 1953 4.657075 TTTTTCGGTGCGTTATCTCTTC 57.343 40.909 0.00 0.00 0.00 2.87
1901 1954 3.306917 TTTCGGTGCGTTATCTCTTCA 57.693 42.857 0.00 0.00 0.00 3.02
1902 1955 2.561733 TCGGTGCGTTATCTCTTCAG 57.438 50.000 0.00 0.00 0.00 3.02
1903 1956 1.134367 TCGGTGCGTTATCTCTTCAGG 59.866 52.381 0.00 0.00 0.00 3.86
1904 1957 1.802880 CGGTGCGTTATCTCTTCAGGG 60.803 57.143 0.00 0.00 0.00 4.45
1905 1958 1.291132 GTGCGTTATCTCTTCAGGGC 58.709 55.000 0.00 0.00 0.00 5.19
1906 1959 0.901827 TGCGTTATCTCTTCAGGGCA 59.098 50.000 0.00 0.00 0.00 5.36
1907 1960 1.277842 TGCGTTATCTCTTCAGGGCAA 59.722 47.619 0.00 0.00 0.00 4.52
1908 1961 1.936547 GCGTTATCTCTTCAGGGCAAG 59.063 52.381 0.00 0.00 0.00 4.01
1909 1962 2.678190 GCGTTATCTCTTCAGGGCAAGT 60.678 50.000 0.00 0.00 0.00 3.16
1910 1963 3.430374 GCGTTATCTCTTCAGGGCAAGTA 60.430 47.826 0.00 0.00 0.00 2.24
1911 1964 4.363999 CGTTATCTCTTCAGGGCAAGTAG 58.636 47.826 0.00 0.00 0.00 2.57
1912 1965 4.142138 CGTTATCTCTTCAGGGCAAGTAGT 60.142 45.833 0.00 0.00 0.00 2.73
1913 1966 5.353111 GTTATCTCTTCAGGGCAAGTAGTC 58.647 45.833 0.00 0.00 0.00 2.59
1914 1967 2.180276 TCTCTTCAGGGCAAGTAGTCC 58.820 52.381 0.00 0.00 44.66 3.85
1919 1972 3.890674 GGGCAAGTAGTCCGCAAG 58.109 61.111 0.00 0.00 28.17 4.01
1936 1989 3.914364 CGCAAGGTTTGATAAAGTCAAGC 59.086 43.478 0.00 0.00 46.85 4.01
1937 1990 4.320494 CGCAAGGTTTGATAAAGTCAAGCT 60.320 41.667 4.97 0.00 46.85 3.74
1938 1991 5.532557 GCAAGGTTTGATAAAGTCAAGCTT 58.467 37.500 0.00 0.00 46.85 3.74
1939 1992 5.985530 GCAAGGTTTGATAAAGTCAAGCTTT 59.014 36.000 0.00 1.52 46.85 3.51
2019 2072 9.274065 CAATATTATCAGATGCATCATGAAACG 57.726 33.333 27.81 7.61 0.00 3.60
2020 2073 6.872628 ATTATCAGATGCATCATGAAACGT 57.127 33.333 27.81 14.55 0.00 3.99
2021 2074 7.967890 ATTATCAGATGCATCATGAAACGTA 57.032 32.000 27.81 13.72 0.00 3.57
2022 2075 7.967890 TTATCAGATGCATCATGAAACGTAT 57.032 32.000 27.81 13.68 0.00 3.06
2023 2076 5.662211 TCAGATGCATCATGAAACGTATG 57.338 39.130 27.81 13.24 0.00 2.39
2024 2077 5.118286 TCAGATGCATCATGAAACGTATGT 58.882 37.500 27.81 0.00 0.00 2.29
2025 2078 5.585844 TCAGATGCATCATGAAACGTATGTT 59.414 36.000 27.81 0.00 40.98 2.71
2026 2079 5.905733 CAGATGCATCATGAAACGTATGTTC 59.094 40.000 27.81 0.00 37.31 3.18
2027 2080 5.585844 AGATGCATCATGAAACGTATGTTCA 59.414 36.000 27.81 3.78 37.31 3.18
2028 2081 5.816449 TGCATCATGAAACGTATGTTCAT 57.184 34.783 7.91 7.91 37.31 2.57
2029 2082 6.917217 TGCATCATGAAACGTATGTTCATA 57.083 33.333 12.37 4.24 37.31 2.15
2030 2083 6.714492 TGCATCATGAAACGTATGTTCATAC 58.286 36.000 12.37 11.56 37.31 2.39
2031 2084 6.538381 TGCATCATGAAACGTATGTTCATACT 59.462 34.615 12.37 2.58 37.31 2.12
2032 2085 7.708752 TGCATCATGAAACGTATGTTCATACTA 59.291 33.333 12.37 4.07 37.31 1.82
2033 2086 8.712363 GCATCATGAAACGTATGTTCATACTAT 58.288 33.333 12.37 5.79 37.31 2.12
2099 2152 9.646427 AATTTAGTTAAACTTTGTGCAGTTTGA 57.354 25.926 11.00 1.71 44.92 2.69
2100 2153 9.816354 ATTTAGTTAAACTTTGTGCAGTTTGAT 57.184 25.926 11.00 1.74 44.92 2.57
2101 2154 9.646427 TTTAGTTAAACTTTGTGCAGTTTGATT 57.354 25.926 11.00 3.96 44.92 2.57
2102 2155 9.646427 TTAGTTAAACTTTGTGCAGTTTGATTT 57.354 25.926 11.00 0.76 44.92 2.17
2103 2156 8.546597 AGTTAAACTTTGTGCAGTTTGATTTT 57.453 26.923 11.00 0.00 44.92 1.82
2104 2157 8.655970 AGTTAAACTTTGTGCAGTTTGATTTTC 58.344 29.630 11.00 0.00 44.92 2.29
2105 2158 8.439286 GTTAAACTTTGTGCAGTTTGATTTTCA 58.561 29.630 11.00 0.00 44.92 2.69
2106 2159 7.614124 AAACTTTGTGCAGTTTGATTTTCAT 57.386 28.000 1.37 0.00 43.88 2.57
2107 2160 7.614124 AACTTTGTGCAGTTTGATTTTCATT 57.386 28.000 0.00 0.00 32.81 2.57
2108 2161 8.715191 AACTTTGTGCAGTTTGATTTTCATTA 57.285 26.923 0.00 0.00 32.81 1.90
2109 2162 8.715191 ACTTTGTGCAGTTTGATTTTCATTAA 57.285 26.923 0.00 0.00 0.00 1.40
2110 2163 9.160496 ACTTTGTGCAGTTTGATTTTCATTAAA 57.840 25.926 0.00 0.00 0.00 1.52
2161 2214 9.562583 CGAAAGGAATACAATAGTCTAGATAGC 57.437 37.037 0.00 0.00 0.00 2.97
2165 2218 9.196139 AGGAATACAATAGTCTAGATAGCATCC 57.804 37.037 0.00 0.00 0.00 3.51
2166 2219 8.132362 GGAATACAATAGTCTAGATAGCATCCG 58.868 40.741 0.00 0.00 0.00 4.18
2167 2220 8.582657 AATACAATAGTCTAGATAGCATCCGT 57.417 34.615 0.00 0.00 0.00 4.69
2168 2221 6.503589 ACAATAGTCTAGATAGCATCCGTC 57.496 41.667 0.00 0.00 0.00 4.79
2169 2222 6.242396 ACAATAGTCTAGATAGCATCCGTCT 58.758 40.000 0.00 0.00 0.00 4.18
2170 2223 7.395617 ACAATAGTCTAGATAGCATCCGTCTA 58.604 38.462 0.00 0.00 0.00 2.59
2171 2224 8.050325 ACAATAGTCTAGATAGCATCCGTCTAT 58.950 37.037 0.00 0.00 0.00 1.98
2172 2225 9.549078 CAATAGTCTAGATAGCATCCGTCTATA 57.451 37.037 0.00 0.00 0.00 1.31
2173 2226 9.772973 AATAGTCTAGATAGCATCCGTCTATAG 57.227 37.037 0.00 0.00 0.00 1.31
2174 2227 6.053005 AGTCTAGATAGCATCCGTCTATAGC 58.947 44.000 0.00 0.00 0.00 2.97
2175 2228 5.818336 GTCTAGATAGCATCCGTCTATAGCA 59.182 44.000 0.00 0.00 0.00 3.49
2176 2229 6.018262 GTCTAGATAGCATCCGTCTATAGCAG 60.018 46.154 0.00 0.00 0.00 4.24
2177 2230 3.380004 AGATAGCATCCGTCTATAGCAGC 59.620 47.826 0.00 0.00 0.00 5.25
2178 2231 1.626686 AGCATCCGTCTATAGCAGCT 58.373 50.000 0.00 0.00 0.00 4.24
2179 2232 1.543802 AGCATCCGTCTATAGCAGCTC 59.456 52.381 0.00 0.00 0.00 4.09
2180 2233 1.543802 GCATCCGTCTATAGCAGCTCT 59.456 52.381 0.00 0.00 0.00 4.09
2181 2234 2.415357 GCATCCGTCTATAGCAGCTCTC 60.415 54.545 0.00 0.00 0.00 3.20
2182 2235 1.898902 TCCGTCTATAGCAGCTCTCC 58.101 55.000 0.00 0.00 0.00 3.71
2183 2236 0.519519 CCGTCTATAGCAGCTCTCCG 59.480 60.000 0.00 0.00 0.00 4.63
2184 2237 1.231221 CGTCTATAGCAGCTCTCCGT 58.769 55.000 0.00 0.00 0.00 4.69
2185 2238 1.069568 CGTCTATAGCAGCTCTCCGTG 60.070 57.143 0.00 0.00 0.00 4.94
2186 2239 1.950909 GTCTATAGCAGCTCTCCGTGT 59.049 52.381 0.00 0.00 0.00 4.49
2187 2240 2.031508 GTCTATAGCAGCTCTCCGTGTC 60.032 54.545 0.00 0.00 0.00 3.67
2188 2241 1.950216 CTATAGCAGCTCTCCGTGTCA 59.050 52.381 0.00 0.00 0.00 3.58
2189 2242 1.407936 ATAGCAGCTCTCCGTGTCAT 58.592 50.000 0.00 0.00 0.00 3.06
2190 2243 0.741326 TAGCAGCTCTCCGTGTCATC 59.259 55.000 0.00 0.00 0.00 2.92
2191 2244 0.969917 AGCAGCTCTCCGTGTCATCT 60.970 55.000 0.00 0.00 0.00 2.90
2192 2245 0.805322 GCAGCTCTCCGTGTCATCTG 60.805 60.000 0.00 0.00 0.00 2.90
2193 2246 0.529833 CAGCTCTCCGTGTCATCTGT 59.470 55.000 0.00 0.00 0.00 3.41
2194 2247 1.745653 CAGCTCTCCGTGTCATCTGTA 59.254 52.381 0.00 0.00 0.00 2.74
2195 2248 2.020720 AGCTCTCCGTGTCATCTGTAG 58.979 52.381 0.00 0.00 0.00 2.74
2196 2249 1.066303 GCTCTCCGTGTCATCTGTAGG 59.934 57.143 0.00 0.00 0.00 3.18
2197 2250 2.370349 CTCTCCGTGTCATCTGTAGGT 58.630 52.381 0.00 0.00 0.00 3.08
2198 2251 3.542648 CTCTCCGTGTCATCTGTAGGTA 58.457 50.000 0.00 0.00 0.00 3.08
2199 2252 3.542648 TCTCCGTGTCATCTGTAGGTAG 58.457 50.000 0.00 0.00 0.00 3.18
2200 2253 2.022195 TCCGTGTCATCTGTAGGTAGC 58.978 52.381 0.00 0.00 0.00 3.58
2201 2254 1.268589 CCGTGTCATCTGTAGGTAGCG 60.269 57.143 0.00 0.00 0.00 4.26
2202 2255 1.268589 CGTGTCATCTGTAGGTAGCGG 60.269 57.143 0.00 0.00 0.00 5.52
2203 2256 1.749634 GTGTCATCTGTAGGTAGCGGT 59.250 52.381 0.00 0.00 0.00 5.68
2204 2257 2.947652 GTGTCATCTGTAGGTAGCGGTA 59.052 50.000 0.00 0.00 0.00 4.02
2205 2258 3.568853 GTGTCATCTGTAGGTAGCGGTAT 59.431 47.826 0.00 0.00 0.00 2.73
2206 2259 4.758674 GTGTCATCTGTAGGTAGCGGTATA 59.241 45.833 0.00 0.00 0.00 1.47
2207 2260 5.001874 TGTCATCTGTAGGTAGCGGTATAG 58.998 45.833 0.00 0.00 0.00 1.31
2208 2261 5.221783 TGTCATCTGTAGGTAGCGGTATAGA 60.222 44.000 0.00 0.00 0.00 1.98
2209 2262 5.881443 GTCATCTGTAGGTAGCGGTATAGAT 59.119 44.000 0.00 0.77 29.78 1.98
2210 2263 7.046652 GTCATCTGTAGGTAGCGGTATAGATA 58.953 42.308 0.00 0.00 29.00 1.98
2211 2264 7.225145 GTCATCTGTAGGTAGCGGTATAGATAG 59.775 44.444 0.00 0.00 29.00 2.08
2212 2265 5.426504 TCTGTAGGTAGCGGTATAGATAGC 58.573 45.833 0.00 0.00 0.00 2.97
2213 2266 5.189342 TCTGTAGGTAGCGGTATAGATAGCT 59.811 44.000 0.00 0.00 42.45 3.32
2214 2267 5.813383 TGTAGGTAGCGGTATAGATAGCTT 58.187 41.667 0.00 0.00 40.62 3.74
2215 2268 6.950842 TGTAGGTAGCGGTATAGATAGCTTA 58.049 40.000 0.00 0.00 40.62 3.09
2216 2269 7.571919 TGTAGGTAGCGGTATAGATAGCTTAT 58.428 38.462 0.00 0.00 40.62 1.73
2217 2270 8.708378 TGTAGGTAGCGGTATAGATAGCTTATA 58.292 37.037 0.00 0.00 40.62 0.98
2218 2271 8.987890 GTAGGTAGCGGTATAGATAGCTTATAC 58.012 40.741 0.00 0.00 40.62 1.47
2219 2272 7.571919 AGGTAGCGGTATAGATAGCTTATACA 58.428 38.462 13.51 0.00 37.53 2.29
2220 2273 8.051535 AGGTAGCGGTATAGATAGCTTATACAA 58.948 37.037 13.51 0.00 37.53 2.41
2221 2274 8.127954 GGTAGCGGTATAGATAGCTTATACAAC 58.872 40.741 13.51 6.82 40.73 3.32
2222 2275 7.698506 AGCGGTATAGATAGCTTATACAACA 57.301 36.000 13.51 0.00 36.41 3.33
2223 2276 7.763356 AGCGGTATAGATAGCTTATACAACAG 58.237 38.462 13.51 5.60 36.41 3.16
2224 2277 7.610692 AGCGGTATAGATAGCTTATACAACAGA 59.389 37.037 13.51 0.00 36.41 3.41
2225 2278 7.697291 GCGGTATAGATAGCTTATACAACAGAC 59.303 40.741 13.51 0.00 0.00 3.51
2226 2279 8.948145 CGGTATAGATAGCTTATACAACAGACT 58.052 37.037 13.51 0.00 0.00 3.24
2230 2283 7.889873 AGATAGCTTATACAACAGACTGTCT 57.110 36.000 8.93 4.06 0.00 3.41
2231 2284 8.299990 AGATAGCTTATACAACAGACTGTCTT 57.700 34.615 8.93 1.27 0.00 3.01
2232 2285 8.754080 AGATAGCTTATACAACAGACTGTCTTT 58.246 33.333 8.93 0.00 0.00 2.52
2233 2286 8.934507 ATAGCTTATACAACAGACTGTCTTTC 57.065 34.615 8.93 0.00 0.00 2.62
2234 2287 6.998802 AGCTTATACAACAGACTGTCTTTCT 58.001 36.000 8.93 0.00 0.00 2.52
2235 2288 8.123639 AGCTTATACAACAGACTGTCTTTCTA 57.876 34.615 8.93 0.00 0.00 2.10
2236 2289 8.247562 AGCTTATACAACAGACTGTCTTTCTAG 58.752 37.037 8.93 4.70 0.00 2.43
2237 2290 8.030106 GCTTATACAACAGACTGTCTTTCTAGT 58.970 37.037 8.93 0.00 0.00 2.57
2238 2291 9.915629 CTTATACAACAGACTGTCTTTCTAGTT 57.084 33.333 8.93 6.14 0.00 2.24
2239 2292 9.692749 TTATACAACAGACTGTCTTTCTAGTTG 57.307 33.333 24.60 24.60 37.70 3.16
2240 2293 5.978814 ACAACAGACTGTCTTTCTAGTTGT 58.021 37.500 25.52 25.52 38.76 3.32
2241 2294 6.043411 ACAACAGACTGTCTTTCTAGTTGTC 58.957 40.000 25.52 0.00 38.99 3.18
2242 2295 6.127310 ACAACAGACTGTCTTTCTAGTTGTCT 60.127 38.462 25.52 12.94 38.99 3.41
2243 2296 7.068348 ACAACAGACTGTCTTTCTAGTTGTCTA 59.932 37.037 25.52 0.00 38.99 2.59
2244 2297 7.768807 ACAGACTGTCTTTCTAGTTGTCTAT 57.231 36.000 7.77 0.00 32.86 1.98
2245 2298 8.865420 ACAGACTGTCTTTCTAGTTGTCTATA 57.135 34.615 7.77 0.00 32.86 1.31
2246 2299 9.298250 ACAGACTGTCTTTCTAGTTGTCTATAA 57.702 33.333 7.77 0.00 32.86 0.98
2247 2300 9.562583 CAGACTGTCTTTCTAGTTGTCTATAAC 57.437 37.037 7.77 0.00 32.86 1.89
2248 2301 9.298250 AGACTGTCTTTCTAGTTGTCTATAACA 57.702 33.333 4.06 0.00 35.59 2.41
2272 2325 9.883142 ACATTTAAAAATGAGAAAAACTCCACA 57.117 25.926 19.53 0.00 46.72 4.17
2275 2328 6.908870 AAAAATGAGAAAAACTCCACAAGC 57.091 33.333 0.00 0.00 44.34 4.01
2276 2329 5.859205 AAATGAGAAAAACTCCACAAGCT 57.141 34.783 0.00 0.00 44.34 3.74
2277 2330 5.444663 AATGAGAAAAACTCCACAAGCTC 57.555 39.130 0.00 0.00 44.34 4.09
2278 2331 3.884895 TGAGAAAAACTCCACAAGCTCA 58.115 40.909 0.00 0.00 44.34 4.26
2279 2332 3.879295 TGAGAAAAACTCCACAAGCTCAG 59.121 43.478 0.00 0.00 44.34 3.35
2280 2333 3.879892 GAGAAAAACTCCACAAGCTCAGT 59.120 43.478 0.00 0.00 39.53 3.41
2281 2334 4.273318 AGAAAAACTCCACAAGCTCAGTT 58.727 39.130 0.00 0.00 0.00 3.16
2282 2335 4.336713 AGAAAAACTCCACAAGCTCAGTTC 59.663 41.667 0.00 0.00 0.00 3.01
2283 2336 2.262423 AACTCCACAAGCTCAGTTCC 57.738 50.000 0.00 0.00 0.00 3.62
2284 2337 1.428869 ACTCCACAAGCTCAGTTCCT 58.571 50.000 0.00 0.00 0.00 3.36
2285 2338 2.609747 ACTCCACAAGCTCAGTTCCTA 58.390 47.619 0.00 0.00 0.00 2.94
2286 2339 2.972713 ACTCCACAAGCTCAGTTCCTAA 59.027 45.455 0.00 0.00 0.00 2.69
2287 2340 3.584848 ACTCCACAAGCTCAGTTCCTAAT 59.415 43.478 0.00 0.00 0.00 1.73
2288 2341 4.042187 ACTCCACAAGCTCAGTTCCTAATT 59.958 41.667 0.00 0.00 0.00 1.40
2289 2342 5.248477 ACTCCACAAGCTCAGTTCCTAATTA 59.752 40.000 0.00 0.00 0.00 1.40
2290 2343 6.121776 TCCACAAGCTCAGTTCCTAATTAA 57.878 37.500 0.00 0.00 0.00 1.40
2291 2344 6.721318 TCCACAAGCTCAGTTCCTAATTAAT 58.279 36.000 0.00 0.00 0.00 1.40
2292 2345 6.823689 TCCACAAGCTCAGTTCCTAATTAATC 59.176 38.462 0.00 0.00 0.00 1.75
2293 2346 6.599244 CCACAAGCTCAGTTCCTAATTAATCA 59.401 38.462 0.00 0.00 0.00 2.57
2294 2347 7.284034 CCACAAGCTCAGTTCCTAATTAATCAT 59.716 37.037 0.00 0.00 0.00 2.45
2295 2348 8.680903 CACAAGCTCAGTTCCTAATTAATCATT 58.319 33.333 0.00 0.00 0.00 2.57
2296 2349 8.897752 ACAAGCTCAGTTCCTAATTAATCATTC 58.102 33.333 0.00 0.00 0.00 2.67
2297 2350 8.348507 CAAGCTCAGTTCCTAATTAATCATTCC 58.651 37.037 0.00 0.00 0.00 3.01
2298 2351 7.577303 AGCTCAGTTCCTAATTAATCATTCCA 58.423 34.615 0.00 0.00 0.00 3.53
2299 2352 8.055181 AGCTCAGTTCCTAATTAATCATTCCAA 58.945 33.333 0.00 0.00 0.00 3.53
2300 2353 8.686334 GCTCAGTTCCTAATTAATCATTCCAAA 58.314 33.333 0.00 0.00 0.00 3.28
2303 2356 9.252962 CAGTTCCTAATTAATCATTCCAAATGC 57.747 33.333 0.00 0.00 0.00 3.56
2304 2357 8.980596 AGTTCCTAATTAATCATTCCAAATGCA 58.019 29.630 0.00 0.00 0.00 3.96
2305 2358 9.252962 GTTCCTAATTAATCATTCCAAATGCAG 57.747 33.333 0.00 0.00 0.00 4.41
2306 2359 7.954835 TCCTAATTAATCATTCCAAATGCAGG 58.045 34.615 0.00 0.00 0.00 4.85
2307 2360 6.647895 CCTAATTAATCATTCCAAATGCAGGC 59.352 38.462 0.00 0.00 0.00 4.85
2308 2361 5.881923 ATTAATCATTCCAAATGCAGGCT 57.118 34.783 0.00 0.00 0.00 4.58
2309 2362 3.814005 AATCATTCCAAATGCAGGCTC 57.186 42.857 0.00 0.00 0.00 4.70
2310 2363 1.477553 TCATTCCAAATGCAGGCTCC 58.522 50.000 0.00 0.00 0.00 4.70
2311 2364 1.006281 TCATTCCAAATGCAGGCTCCT 59.994 47.619 0.00 0.00 0.00 3.69
2312 2365 1.829222 CATTCCAAATGCAGGCTCCTT 59.171 47.619 0.00 0.00 0.00 3.36
2313 2366 2.014010 TTCCAAATGCAGGCTCCTTT 57.986 45.000 0.00 0.00 0.00 3.11
2314 2367 2.014010 TCCAAATGCAGGCTCCTTTT 57.986 45.000 0.00 0.00 0.00 2.27
2315 2368 1.895131 TCCAAATGCAGGCTCCTTTTC 59.105 47.619 0.00 0.00 0.00 2.29
2316 2369 1.403249 CCAAATGCAGGCTCCTTTTCG 60.403 52.381 0.00 0.00 0.00 3.46
2317 2370 1.541147 CAAATGCAGGCTCCTTTTCGA 59.459 47.619 0.00 0.00 0.00 3.71
2318 2371 1.909700 AATGCAGGCTCCTTTTCGAA 58.090 45.000 0.00 0.00 0.00 3.71
2319 2372 2.134789 ATGCAGGCTCCTTTTCGAAT 57.865 45.000 0.00 0.00 0.00 3.34
2320 2373 1.909700 TGCAGGCTCCTTTTCGAATT 58.090 45.000 0.00 0.00 0.00 2.17
2321 2374 3.066291 TGCAGGCTCCTTTTCGAATTA 57.934 42.857 0.00 0.00 0.00 1.40
2322 2375 2.747446 TGCAGGCTCCTTTTCGAATTAC 59.253 45.455 0.00 0.00 0.00 1.89
2323 2376 3.010420 GCAGGCTCCTTTTCGAATTACT 58.990 45.455 0.00 0.00 0.00 2.24
2324 2377 3.440522 GCAGGCTCCTTTTCGAATTACTT 59.559 43.478 0.00 0.00 0.00 2.24
2325 2378 4.672801 GCAGGCTCCTTTTCGAATTACTTG 60.673 45.833 0.00 0.00 0.00 3.16
2326 2379 4.455877 CAGGCTCCTTTTCGAATTACTTGT 59.544 41.667 0.00 0.00 0.00 3.16
2327 2380 4.695928 AGGCTCCTTTTCGAATTACTTGTC 59.304 41.667 0.00 0.00 0.00 3.18
2328 2381 4.695928 GGCTCCTTTTCGAATTACTTGTCT 59.304 41.667 0.00 0.00 0.00 3.41
2329 2382 5.181433 GGCTCCTTTTCGAATTACTTGTCTT 59.819 40.000 0.00 0.00 0.00 3.01
2330 2383 6.370718 GGCTCCTTTTCGAATTACTTGTCTTA 59.629 38.462 0.00 0.00 0.00 2.10
2331 2384 7.413109 GGCTCCTTTTCGAATTACTTGTCTTAG 60.413 40.741 0.00 0.00 0.00 2.18
2332 2385 7.331193 GCTCCTTTTCGAATTACTTGTCTTAGA 59.669 37.037 0.00 0.00 0.00 2.10
2333 2386 9.372369 CTCCTTTTCGAATTACTTGTCTTAGAT 57.628 33.333 0.00 0.00 0.00 1.98
2334 2387 9.720769 TCCTTTTCGAATTACTTGTCTTAGATT 57.279 29.630 0.00 0.00 0.00 2.40
2359 2412 9.594478 TTTGTTTAGATACGAAGATATCAAGCA 57.406 29.630 5.32 0.00 34.50 3.91
2360 2413 8.575565 TGTTTAGATACGAAGATATCAAGCAC 57.424 34.615 5.32 0.00 34.50 4.40
2361 2414 8.414003 TGTTTAGATACGAAGATATCAAGCACT 58.586 33.333 5.32 0.00 34.50 4.40
2362 2415 9.894783 GTTTAGATACGAAGATATCAAGCACTA 57.105 33.333 5.32 0.00 34.50 2.74
2366 2419 9.416794 AGATACGAAGATATCAAGCACTAAATG 57.583 33.333 5.32 0.00 34.50 2.32
2367 2420 9.411801 GATACGAAGATATCAAGCACTAAATGA 57.588 33.333 5.32 0.00 32.64 2.57
2368 2421 7.706281 ACGAAGATATCAAGCACTAAATGAG 57.294 36.000 5.32 0.00 0.00 2.90
2369 2422 7.268586 ACGAAGATATCAAGCACTAAATGAGT 58.731 34.615 5.32 0.00 39.82 3.41
2370 2423 7.436673 ACGAAGATATCAAGCACTAAATGAGTC 59.563 37.037 5.32 0.00 35.64 3.36
2371 2424 7.651304 CGAAGATATCAAGCACTAAATGAGTCT 59.349 37.037 5.32 0.00 35.64 3.24
2372 2425 9.973450 GAAGATATCAAGCACTAAATGAGTCTA 57.027 33.333 5.32 0.00 35.64 2.59
2373 2426 9.979578 AAGATATCAAGCACTAAATGAGTCTAG 57.020 33.333 5.32 0.00 35.64 2.43
2374 2427 9.360901 AGATATCAAGCACTAAATGAGTCTAGA 57.639 33.333 5.32 0.00 35.64 2.43
2378 2431 8.293699 TCAAGCACTAAATGAGTCTAGATACA 57.706 34.615 0.00 0.00 35.64 2.29
2379 2432 8.918116 TCAAGCACTAAATGAGTCTAGATACAT 58.082 33.333 0.00 2.28 35.64 2.29
2380 2433 9.190858 CAAGCACTAAATGAGTCTAGATACATC 57.809 37.037 12.66 3.61 35.64 3.06
2381 2434 7.891561 AGCACTAAATGAGTCTAGATACATCC 58.108 38.462 12.66 0.00 35.64 3.51
2382 2435 7.507277 AGCACTAAATGAGTCTAGATACATCCA 59.493 37.037 12.66 5.73 35.64 3.41
2383 2436 8.310382 GCACTAAATGAGTCTAGATACATCCAT 58.690 37.037 12.66 7.28 35.64 3.41
2402 2455 9.862371 ACATCCATATATAGACAAATCGAAGAC 57.138 33.333 0.00 0.00 42.51 3.01
2403 2456 9.860898 CATCCATATATAGACAAATCGAAGACA 57.139 33.333 0.00 0.00 42.51 3.41
2405 2458 9.914131 TCCATATATAGACAAATCGAAGACAAG 57.086 33.333 0.00 0.00 42.51 3.16
2406 2459 9.698309 CCATATATAGACAAATCGAAGACAAGT 57.302 33.333 0.00 0.00 42.51 3.16
2412 2465 7.133891 AGACAAATCGAAGACAAGTAATTGG 57.866 36.000 7.93 0.00 42.51 3.16
2413 2466 6.149474 AGACAAATCGAAGACAAGTAATTGGG 59.851 38.462 7.93 0.00 42.51 4.12
2414 2467 6.001460 ACAAATCGAAGACAAGTAATTGGGA 58.999 36.000 7.93 0.00 42.51 4.37
2415 2468 6.488683 ACAAATCGAAGACAAGTAATTGGGAA 59.511 34.615 7.93 0.00 42.51 3.97
2416 2469 6.496338 AATCGAAGACAAGTAATTGGGAAC 57.504 37.500 7.93 0.00 42.51 3.62
2417 2470 3.991773 TCGAAGACAAGTAATTGGGAACG 59.008 43.478 7.93 7.91 0.00 3.95
2418 2471 3.124636 CGAAGACAAGTAATTGGGAACGG 59.875 47.826 7.93 0.00 0.00 4.44
2419 2472 4.320870 GAAGACAAGTAATTGGGAACGGA 58.679 43.478 7.93 0.00 0.00 4.69
2420 2473 3.939066 AGACAAGTAATTGGGAACGGAG 58.061 45.455 7.93 0.00 0.00 4.63
2421 2474 3.007635 GACAAGTAATTGGGAACGGAGG 58.992 50.000 7.93 0.00 0.00 4.30
2422 2475 2.640826 ACAAGTAATTGGGAACGGAGGA 59.359 45.455 7.93 0.00 0.00 3.71
2423 2476 3.073356 ACAAGTAATTGGGAACGGAGGAA 59.927 43.478 7.93 0.00 0.00 3.36
2424 2477 3.629142 AGTAATTGGGAACGGAGGAAG 57.371 47.619 0.00 0.00 0.00 3.46
2425 2478 2.910977 AGTAATTGGGAACGGAGGAAGT 59.089 45.455 0.00 0.00 0.00 3.01
2426 2479 4.098894 AGTAATTGGGAACGGAGGAAGTA 58.901 43.478 0.00 0.00 0.00 2.24
2427 2480 4.533311 AGTAATTGGGAACGGAGGAAGTAA 59.467 41.667 0.00 0.00 0.00 2.24
2428 2481 4.586306 AATTGGGAACGGAGGAAGTAAT 57.414 40.909 0.00 0.00 0.00 1.89
2429 2482 4.586306 ATTGGGAACGGAGGAAGTAATT 57.414 40.909 0.00 0.00 0.00 1.40
2430 2483 4.376225 TTGGGAACGGAGGAAGTAATTT 57.624 40.909 0.00 0.00 0.00 1.82
2431 2484 3.681593 TGGGAACGGAGGAAGTAATTTG 58.318 45.455 0.00 0.00 0.00 2.32
2432 2485 2.422479 GGGAACGGAGGAAGTAATTTGC 59.578 50.000 0.00 0.00 0.00 3.68
2433 2486 3.078837 GGAACGGAGGAAGTAATTTGCA 58.921 45.455 0.00 0.00 0.00 4.08
2434 2487 3.127030 GGAACGGAGGAAGTAATTTGCAG 59.873 47.826 0.00 0.00 0.00 4.41
2435 2488 3.695830 ACGGAGGAAGTAATTTGCAGA 57.304 42.857 0.00 0.00 0.00 4.26
2436 2489 3.600388 ACGGAGGAAGTAATTTGCAGAG 58.400 45.455 0.00 0.00 0.00 3.35
2437 2490 3.260884 ACGGAGGAAGTAATTTGCAGAGA 59.739 43.478 0.00 0.00 0.00 3.10
2438 2491 3.868077 CGGAGGAAGTAATTTGCAGAGAG 59.132 47.826 0.00 0.00 0.00 3.20
2439 2492 4.621747 CGGAGGAAGTAATTTGCAGAGAGT 60.622 45.833 0.00 0.00 0.00 3.24
2440 2493 4.873259 GGAGGAAGTAATTTGCAGAGAGTC 59.127 45.833 0.00 0.00 0.00 3.36
2441 2494 5.482908 GAGGAAGTAATTTGCAGAGAGTCA 58.517 41.667 0.00 0.00 0.00 3.41
2442 2495 6.059787 AGGAAGTAATTTGCAGAGAGTCAT 57.940 37.500 0.00 0.00 0.00 3.06
2443 2496 5.879223 AGGAAGTAATTTGCAGAGAGTCATG 59.121 40.000 0.00 0.00 0.00 3.07
2444 2497 5.448360 GGAAGTAATTTGCAGAGAGTCATGC 60.448 44.000 12.16 12.16 42.86 4.06
2445 2498 3.944015 AGTAATTTGCAGAGAGTCATGCC 59.056 43.478 15.38 2.19 41.85 4.40
2446 2499 2.502142 ATTTGCAGAGAGTCATGCCA 57.498 45.000 15.38 4.38 41.85 4.92
2447 2500 1.527034 TTTGCAGAGAGTCATGCCAC 58.473 50.000 15.38 0.00 41.85 5.01
2448 2501 0.321919 TTGCAGAGAGTCATGCCACC 60.322 55.000 15.38 0.00 41.85 4.61
2449 2502 1.297689 GCAGAGAGTCATGCCACCA 59.702 57.895 8.73 0.00 36.41 4.17
2450 2503 0.107312 GCAGAGAGTCATGCCACCAT 60.107 55.000 8.73 0.00 36.41 3.55
2452 2505 0.107312 AGAGAGTCATGCCACCATGC 60.107 55.000 0.00 0.00 46.69 4.06
2453 2506 1.434622 GAGAGTCATGCCACCATGCG 61.435 60.000 0.00 0.00 46.69 4.73
2454 2507 3.117175 GAGTCATGCCACCATGCGC 62.117 63.158 0.00 0.00 46.69 6.09
2455 2508 3.442167 GTCATGCCACCATGCGCA 61.442 61.111 14.96 14.96 46.69 6.09
2456 2509 3.135457 TCATGCCACCATGCGCAG 61.135 61.111 18.32 5.51 46.69 5.18
2457 2510 3.445687 CATGCCACCATGCGCAGT 61.446 61.111 18.32 6.31 42.08 4.40
2458 2511 3.445687 ATGCCACCATGCGCAGTG 61.446 61.111 18.32 19.18 38.64 3.66
2470 2523 4.530857 GCAGTGCCGGCTCCGTAT 62.531 66.667 29.70 4.90 37.81 3.06
2471 2524 2.279517 CAGTGCCGGCTCCGTATC 60.280 66.667 29.70 8.96 37.81 2.24
2472 2525 2.758327 AGTGCCGGCTCCGTATCA 60.758 61.111 29.70 0.07 37.81 2.15
2473 2526 2.585247 GTGCCGGCTCCGTATCAC 60.585 66.667 29.70 11.08 37.81 3.06
2474 2527 4.201679 TGCCGGCTCCGTATCACG 62.202 66.667 29.70 0.00 42.11 4.35
2476 2529 4.201679 CCGGCTCCGTATCACGCA 62.202 66.667 7.59 0.00 40.91 5.24
2477 2530 2.655364 CGGCTCCGTATCACGCAG 60.655 66.667 0.00 0.00 40.91 5.18
2480 2533 4.814900 CTCCGTATCACGCAGCTT 57.185 55.556 0.00 0.00 40.91 3.74
2481 2534 2.582959 CTCCGTATCACGCAGCTTC 58.417 57.895 0.00 0.00 40.91 3.86
2482 2535 0.872021 CTCCGTATCACGCAGCTTCC 60.872 60.000 0.00 0.00 40.91 3.46
2483 2536 1.153647 CCGTATCACGCAGCTTCCA 60.154 57.895 0.00 0.00 40.91 3.53
2484 2537 1.421410 CCGTATCACGCAGCTTCCAC 61.421 60.000 0.00 0.00 40.91 4.02
2485 2538 1.742900 CGTATCACGCAGCTTCCACG 61.743 60.000 0.00 0.00 33.65 4.94
2486 2539 0.457853 GTATCACGCAGCTTCCACGA 60.458 55.000 0.00 0.00 0.00 4.35
2487 2540 0.245266 TATCACGCAGCTTCCACGAA 59.755 50.000 0.00 0.00 0.00 3.85
2488 2541 1.016130 ATCACGCAGCTTCCACGAAG 61.016 55.000 0.00 0.00 42.03 3.79
2489 2542 1.664649 CACGCAGCTTCCACGAAGA 60.665 57.895 5.58 0.00 41.71 2.87
2490 2543 1.664965 ACGCAGCTTCCACGAAGAC 60.665 57.895 5.58 0.00 41.71 3.01
2491 2544 2.720758 CGCAGCTTCCACGAAGACG 61.721 63.158 5.58 2.34 41.71 4.18
2492 2545 1.372997 GCAGCTTCCACGAAGACGA 60.373 57.895 5.58 0.00 41.71 4.20
2493 2546 0.944311 GCAGCTTCCACGAAGACGAA 60.944 55.000 5.58 0.00 41.71 3.85
2494 2547 1.497991 CAGCTTCCACGAAGACGAAA 58.502 50.000 5.58 0.00 41.71 3.46
2495 2548 1.864711 CAGCTTCCACGAAGACGAAAA 59.135 47.619 5.58 0.00 41.71 2.29
2496 2549 2.480419 CAGCTTCCACGAAGACGAAAAT 59.520 45.455 5.58 0.00 41.71 1.82
2497 2550 3.058914 CAGCTTCCACGAAGACGAAAATT 60.059 43.478 5.58 0.00 41.71 1.82
2498 2551 3.564225 AGCTTCCACGAAGACGAAAATTT 59.436 39.130 5.58 0.00 41.71 1.82
2499 2552 3.664025 GCTTCCACGAAGACGAAAATTTG 59.336 43.478 5.58 0.00 41.71 2.32
2500 2553 4.788521 GCTTCCACGAAGACGAAAATTTGT 60.789 41.667 5.58 0.00 41.71 2.83
2501 2554 5.559417 GCTTCCACGAAGACGAAAATTTGTA 60.559 40.000 5.58 0.00 41.71 2.41
2502 2555 5.987777 TCCACGAAGACGAAAATTTGTAA 57.012 34.783 0.00 0.00 42.66 2.41
2503 2556 6.360844 TCCACGAAGACGAAAATTTGTAAA 57.639 33.333 0.00 0.00 42.66 2.01
2504 2557 6.783162 TCCACGAAGACGAAAATTTGTAAAA 58.217 32.000 0.00 0.00 42.66 1.52
2505 2558 7.419204 TCCACGAAGACGAAAATTTGTAAAAT 58.581 30.769 0.00 0.00 42.66 1.82
2506 2559 7.588488 TCCACGAAGACGAAAATTTGTAAAATC 59.412 33.333 0.00 0.00 42.66 2.17
2507 2560 7.377397 CCACGAAGACGAAAATTTGTAAAATCA 59.623 33.333 0.00 0.00 42.66 2.57
2508 2561 8.738554 CACGAAGACGAAAATTTGTAAAATCAA 58.261 29.630 0.00 0.00 42.66 2.57
2509 2562 9.458374 ACGAAGACGAAAATTTGTAAAATCAAT 57.542 25.926 0.00 0.00 42.66 2.57
2529 2582 9.859152 AATCAATTAAGGGAGGAAAATCTAGAG 57.141 33.333 0.00 0.00 0.00 2.43
2530 2583 8.624019 TCAATTAAGGGAGGAAAATCTAGAGA 57.376 34.615 0.00 0.00 0.00 3.10
2531 2584 8.709308 TCAATTAAGGGAGGAAAATCTAGAGAG 58.291 37.037 0.00 0.00 0.00 3.20
2532 2585 8.709308 CAATTAAGGGAGGAAAATCTAGAGAGA 58.291 37.037 0.00 0.00 35.71 3.10
2533 2586 7.663043 TTAAGGGAGGAAAATCTAGAGAGAC 57.337 40.000 0.00 0.00 33.41 3.36
2534 2587 4.211920 AGGGAGGAAAATCTAGAGAGACG 58.788 47.826 0.00 0.00 33.41 4.18
2535 2588 3.319689 GGGAGGAAAATCTAGAGAGACGG 59.680 52.174 0.00 0.00 33.41 4.79
2536 2589 4.208746 GGAGGAAAATCTAGAGAGACGGA 58.791 47.826 0.00 0.00 33.41 4.69
2537 2590 4.277423 GGAGGAAAATCTAGAGAGACGGAG 59.723 50.000 0.00 0.00 33.41 4.63
2538 2591 5.118729 AGGAAAATCTAGAGAGACGGAGA 57.881 43.478 0.00 0.00 33.41 3.71
2539 2592 5.511363 AGGAAAATCTAGAGAGACGGAGAA 58.489 41.667 0.00 0.00 33.41 2.87
2540 2593 5.592688 AGGAAAATCTAGAGAGACGGAGAAG 59.407 44.000 0.00 0.00 33.41 2.85
2541 2594 5.591067 GGAAAATCTAGAGAGACGGAGAAGA 59.409 44.000 0.00 0.00 33.41 2.87
2542 2595 6.238648 GGAAAATCTAGAGAGACGGAGAAGAG 60.239 46.154 0.00 0.00 33.41 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.066143 CGCTTGACCCTTATGAGGTGT 60.066 52.381 2.39 0.17 41.85 4.16
26 27 1.656652 CGCTTGACCCTTATGAGGTG 58.343 55.000 2.39 0.00 41.85 4.00
28 29 0.815615 GGCGCTTGACCCTTATGAGG 60.816 60.000 7.64 0.00 43.15 3.86
244 245 1.993653 CTCCTTGGTCCCATGCTCA 59.006 57.895 0.00 0.00 0.00 4.26
250 251 0.970937 CTACGAGCTCCTTGGTCCCA 60.971 60.000 8.47 0.00 39.84 4.37
373 374 0.027455 TTTCAGCTTCGCACACGTTG 59.973 50.000 0.00 0.00 41.18 4.10
415 416 2.044758 AGTGGTTCAGAGTACCGGTTT 58.955 47.619 15.04 0.32 38.55 3.27
551 555 5.920193 AAACACAAGCCAGTTGCATATAT 57.080 34.783 0.00 0.00 44.83 0.86
552 556 5.720371 AAAACACAAGCCAGTTGCATATA 57.280 34.783 0.00 0.00 44.83 0.86
593 600 1.992557 AGAATGCCAAACCCAGGACTA 59.007 47.619 0.00 0.00 0.00 2.59
594 601 0.779997 AGAATGCCAAACCCAGGACT 59.220 50.000 0.00 0.00 0.00 3.85
597 604 2.583472 GGAGAATGCCAAACCCAGG 58.417 57.895 0.00 0.00 0.00 4.45
607 614 0.106967 GGGACAAGGAGGGAGAATGC 60.107 60.000 0.00 0.00 0.00 3.56
653 662 1.575244 CCACACAGATATGCGACCAG 58.425 55.000 0.00 0.00 0.00 4.00
751 763 1.891150 TCCTGACCGAGTGGAAGTTAC 59.109 52.381 0.00 0.00 39.21 2.50
836 852 3.788766 CTGCTCGGAAAACGCGGG 61.789 66.667 12.47 0.00 43.86 6.13
862 878 3.565902 GGTTGGCTTATATTGGACAGAGC 59.434 47.826 0.00 0.00 0.00 4.09
921 943 2.438385 GAATGGCGACGCACGTGTTT 62.438 55.000 23.09 3.83 44.60 2.83
933 955 0.322456 TGAGAAAGTGGGGAATGGCG 60.322 55.000 0.00 0.00 0.00 5.69
965 989 2.279120 CGAGATCGAGCTGGTGCC 60.279 66.667 8.50 0.00 43.02 5.01
1213 1258 2.801679 CGAGGAGATAGTAGGTGACGAC 59.198 54.545 0.00 0.00 36.03 4.34
1227 1272 2.113433 GTAGAGCACGGCGAGGAGA 61.113 63.158 16.62 0.00 0.00 3.71
1506 1551 1.915769 GGACACCTGGTGGAGCTCT 60.916 63.158 29.05 8.43 37.94 4.09
1557 1602 2.286872 CATCCATGGCAGAGTTGACTC 58.713 52.381 6.96 2.93 43.17 3.36
1637 1689 3.181514 GCTCGCCGAAAATAACAAGCTTA 60.182 43.478 0.00 0.00 0.00 3.09
1644 1696 0.727398 AGCAGCTCGCCGAAAATAAC 59.273 50.000 0.00 0.00 44.04 1.89
1655 1707 3.420606 CAGCCACACAGCAGCTCG 61.421 66.667 0.00 0.00 33.70 5.03
1696 1748 4.988598 CAGCGAACCCCAGCACGT 62.989 66.667 0.00 0.00 35.48 4.49
1709 1761 4.578913 ACGTCAGTGATTCCAGCG 57.421 55.556 0.00 0.00 0.00 5.18
1734 1786 3.063704 CGGGCCAGCTGATTTGCA 61.064 61.111 17.39 0.00 34.99 4.08
1737 1789 2.043652 ATGCGGGCCAGCTGATTT 60.044 55.556 28.31 5.79 38.13 2.17
1740 1792 4.783621 GACATGCGGGCCAGCTGA 62.784 66.667 28.31 10.08 38.13 4.26
1762 1814 2.176889 GGCTGAGGTGACCTAGTGTAA 58.823 52.381 2.97 0.00 31.76 2.41
1763 1815 1.076513 TGGCTGAGGTGACCTAGTGTA 59.923 52.381 2.97 0.00 31.76 2.90
1769 1821 1.004044 CAGATTTGGCTGAGGTGACCT 59.996 52.381 2.41 2.41 38.14 3.85
1785 1837 1.112113 ACCGAGTATGGCGTTCAGAT 58.888 50.000 0.00 0.00 0.00 2.90
1808 1860 8.546597 ACTTTACAGCAAAAGAAAACAAATGT 57.453 26.923 11.70 0.00 38.50 2.71
1827 1879 2.604462 ACACACGTCGGTCAAACTTTAC 59.396 45.455 0.00 0.00 0.00 2.01
1844 1897 3.943381 AGACGTGGTCGAATAGATACACA 59.057 43.478 0.00 0.00 38.60 3.72
1845 1898 4.548991 AGACGTGGTCGAATAGATACAC 57.451 45.455 0.00 0.00 37.67 2.90
1870 1923 1.463056 CGCACCGAAAAATCAGCAGTA 59.537 47.619 0.00 0.00 0.00 2.74
1886 1939 1.291132 GCCCTGAAGAGATAACGCAC 58.709 55.000 0.00 0.00 0.00 5.34
1890 1943 5.346181 ACTACTTGCCCTGAAGAGATAAC 57.654 43.478 0.00 0.00 0.00 1.89
1893 1946 2.769095 GGACTACTTGCCCTGAAGAGAT 59.231 50.000 0.00 0.00 0.00 2.75
1897 1950 0.741221 GCGGACTACTTGCCCTGAAG 60.741 60.000 0.00 0.00 0.00 3.02
1900 1953 1.003839 TTGCGGACTACTTGCCCTG 60.004 57.895 0.00 0.00 0.00 4.45
1901 1954 1.296715 CTTGCGGACTACTTGCCCT 59.703 57.895 0.00 0.00 0.00 5.19
1902 1955 1.745489 CCTTGCGGACTACTTGCCC 60.745 63.158 0.00 0.00 0.00 5.36
1903 1956 0.605589 AACCTTGCGGACTACTTGCC 60.606 55.000 0.00 0.00 0.00 4.52
1904 1957 1.069227 CAAACCTTGCGGACTACTTGC 60.069 52.381 0.00 0.00 0.00 4.01
1905 1958 2.489971 TCAAACCTTGCGGACTACTTG 58.510 47.619 0.00 0.00 0.00 3.16
1906 1959 2.922740 TCAAACCTTGCGGACTACTT 57.077 45.000 0.00 0.00 0.00 2.24
1907 1960 4.546829 TTATCAAACCTTGCGGACTACT 57.453 40.909 0.00 0.00 0.00 2.57
1908 1961 4.694037 ACTTTATCAAACCTTGCGGACTAC 59.306 41.667 0.00 0.00 0.00 2.73
1909 1962 4.901868 ACTTTATCAAACCTTGCGGACTA 58.098 39.130 0.00 0.00 0.00 2.59
1910 1963 3.751518 ACTTTATCAAACCTTGCGGACT 58.248 40.909 0.00 0.00 0.00 3.85
1911 1964 3.500680 TGACTTTATCAAACCTTGCGGAC 59.499 43.478 0.00 0.00 33.02 4.79
1912 1965 3.745799 TGACTTTATCAAACCTTGCGGA 58.254 40.909 0.00 0.00 33.02 5.54
1913 1966 4.475944 CTTGACTTTATCAAACCTTGCGG 58.524 43.478 0.00 0.00 46.80 5.69
1914 1967 3.914364 GCTTGACTTTATCAAACCTTGCG 59.086 43.478 0.00 0.00 46.80 4.85
1915 1968 5.126396 AGCTTGACTTTATCAAACCTTGC 57.874 39.130 0.00 0.00 46.80 4.01
1928 1981 9.998106 TTAGTCAAACTCTATAAAGCTTGACTT 57.002 29.630 23.23 12.05 41.70 3.01
1993 2046 9.274065 CGTTTCATGATGCATCTGATAATATTG 57.726 33.333 26.32 10.34 0.00 1.90
1994 2047 9.006839 ACGTTTCATGATGCATCTGATAATATT 57.993 29.630 26.32 8.29 0.00 1.28
1995 2048 8.557592 ACGTTTCATGATGCATCTGATAATAT 57.442 30.769 26.32 7.86 0.00 1.28
1996 2049 7.967890 ACGTTTCATGATGCATCTGATAATA 57.032 32.000 26.32 5.68 0.00 0.98
1997 2050 6.872628 ACGTTTCATGATGCATCTGATAAT 57.127 33.333 26.32 9.30 0.00 1.28
1998 2051 7.442062 ACATACGTTTCATGATGCATCTGATAA 59.558 33.333 26.32 17.90 0.00 1.75
1999 2052 6.930722 ACATACGTTTCATGATGCATCTGATA 59.069 34.615 26.32 17.86 0.00 2.15
2000 2053 5.761726 ACATACGTTTCATGATGCATCTGAT 59.238 36.000 26.32 10.77 0.00 2.90
2001 2054 5.118286 ACATACGTTTCATGATGCATCTGA 58.882 37.500 26.32 22.04 0.00 3.27
2002 2055 5.413969 ACATACGTTTCATGATGCATCTG 57.586 39.130 26.32 20.36 0.00 2.90
2003 2056 5.585844 TGAACATACGTTTCATGATGCATCT 59.414 36.000 26.32 10.21 34.75 2.90
2004 2057 5.809464 TGAACATACGTTTCATGATGCATC 58.191 37.500 20.14 20.14 34.75 3.91
2005 2058 5.816449 TGAACATACGTTTCATGATGCAT 57.184 34.783 0.00 0.00 34.75 3.96
2006 2059 5.816449 ATGAACATACGTTTCATGATGCA 57.184 34.783 12.06 0.00 34.75 3.96
2007 2060 6.948353 AGTATGAACATACGTTTCATGATGC 58.052 36.000 19.46 9.90 46.18 3.91
2073 2126 9.646427 TCAAACTGCACAAAGTTTAACTAAATT 57.354 25.926 0.00 0.00 46.19 1.82
2074 2127 9.816354 ATCAAACTGCACAAAGTTTAACTAAAT 57.184 25.926 0.00 0.00 46.19 1.40
2075 2128 9.646427 AATCAAACTGCACAAAGTTTAACTAAA 57.354 25.926 0.00 0.00 46.19 1.85
2076 2129 9.646427 AAATCAAACTGCACAAAGTTTAACTAA 57.354 25.926 0.00 0.00 46.19 2.24
2077 2130 9.646427 AAAATCAAACTGCACAAAGTTTAACTA 57.354 25.926 0.00 0.00 46.19 2.24
2078 2131 8.546597 AAAATCAAACTGCACAAAGTTTAACT 57.453 26.923 1.90 0.00 46.19 2.24
2079 2132 8.439286 TGAAAATCAAACTGCACAAAGTTTAAC 58.561 29.630 1.90 0.00 46.19 2.01
2080 2133 8.539770 TGAAAATCAAACTGCACAAAGTTTAA 57.460 26.923 1.90 0.00 46.19 1.52
2081 2134 8.715191 ATGAAAATCAAACTGCACAAAGTTTA 57.285 26.923 1.90 0.00 46.19 2.01
2083 2136 7.614124 AATGAAAATCAAACTGCACAAAGTT 57.386 28.000 0.00 0.00 42.21 2.66
2084 2137 8.715191 TTAATGAAAATCAAACTGCACAAAGT 57.285 26.923 0.00 0.00 0.00 2.66
2135 2188 9.562583 GCTATCTAGACTATTGTATTCCTTTCG 57.437 37.037 0.00 0.00 0.00 3.46
2139 2192 9.196139 GGATGCTATCTAGACTATTGTATTCCT 57.804 37.037 0.00 0.00 0.00 3.36
2140 2193 8.132362 CGGATGCTATCTAGACTATTGTATTCC 58.868 40.741 0.00 0.00 0.00 3.01
2141 2194 8.679100 ACGGATGCTATCTAGACTATTGTATTC 58.321 37.037 0.00 0.00 0.00 1.75
2142 2195 8.582657 ACGGATGCTATCTAGACTATTGTATT 57.417 34.615 0.00 0.00 0.00 1.89
2143 2196 8.050325 AGACGGATGCTATCTAGACTATTGTAT 58.950 37.037 0.00 0.00 0.00 2.29
2144 2197 7.395617 AGACGGATGCTATCTAGACTATTGTA 58.604 38.462 0.00 0.00 0.00 2.41
2145 2198 6.242396 AGACGGATGCTATCTAGACTATTGT 58.758 40.000 0.00 0.00 0.00 2.71
2146 2199 6.751514 AGACGGATGCTATCTAGACTATTG 57.248 41.667 0.00 0.00 0.00 1.90
2147 2200 9.772973 CTATAGACGGATGCTATCTAGACTATT 57.227 37.037 0.00 0.00 32.63 1.73
2148 2201 7.876068 GCTATAGACGGATGCTATCTAGACTAT 59.124 40.741 3.21 0.00 33.70 2.12
2149 2202 7.147707 TGCTATAGACGGATGCTATCTAGACTA 60.148 40.741 3.21 0.00 31.43 2.59
2150 2203 6.053005 GCTATAGACGGATGCTATCTAGACT 58.947 44.000 3.21 0.00 31.43 3.24
2151 2204 5.818336 TGCTATAGACGGATGCTATCTAGAC 59.182 44.000 3.21 0.00 31.43 2.59
2152 2205 5.990668 TGCTATAGACGGATGCTATCTAGA 58.009 41.667 3.21 0.00 31.43 2.43
2153 2206 5.277779 GCTGCTATAGACGGATGCTATCTAG 60.278 48.000 3.21 0.00 31.43 2.43
2154 2207 4.576873 GCTGCTATAGACGGATGCTATCTA 59.423 45.833 3.21 0.00 31.43 1.98
2155 2208 3.380004 GCTGCTATAGACGGATGCTATCT 59.620 47.826 3.21 0.00 31.43 1.98
2156 2209 3.380004 AGCTGCTATAGACGGATGCTATC 59.620 47.826 0.00 0.00 31.43 2.08
2157 2210 3.360867 AGCTGCTATAGACGGATGCTAT 58.639 45.455 0.00 0.00 33.42 2.97
2158 2211 2.750166 GAGCTGCTATAGACGGATGCTA 59.250 50.000 0.15 0.00 0.00 3.49
2159 2212 1.543802 GAGCTGCTATAGACGGATGCT 59.456 52.381 0.15 2.94 0.00 3.79
2160 2213 1.543802 AGAGCTGCTATAGACGGATGC 59.456 52.381 0.15 0.00 0.00 3.91
2161 2214 2.163412 GGAGAGCTGCTATAGACGGATG 59.837 54.545 0.15 0.00 0.00 3.51
2162 2215 2.442413 GGAGAGCTGCTATAGACGGAT 58.558 52.381 0.15 0.00 0.00 4.18
2163 2216 1.878525 CGGAGAGCTGCTATAGACGGA 60.879 57.143 0.15 0.00 0.00 4.69
2164 2217 0.519519 CGGAGAGCTGCTATAGACGG 59.480 60.000 0.15 1.38 0.00 4.79
2165 2218 1.069568 CACGGAGAGCTGCTATAGACG 60.070 57.143 0.15 8.01 0.00 4.18
2166 2219 1.950909 ACACGGAGAGCTGCTATAGAC 59.049 52.381 0.15 0.00 0.00 2.59
2167 2220 2.222886 GACACGGAGAGCTGCTATAGA 58.777 52.381 0.15 0.00 0.00 1.98
2168 2221 1.950216 TGACACGGAGAGCTGCTATAG 59.050 52.381 0.15 0.00 0.00 1.31
2169 2222 2.052782 TGACACGGAGAGCTGCTATA 57.947 50.000 0.15 0.00 0.00 1.31
2170 2223 1.339610 GATGACACGGAGAGCTGCTAT 59.660 52.381 0.15 0.00 0.00 2.97
2171 2224 0.741326 GATGACACGGAGAGCTGCTA 59.259 55.000 0.15 0.00 0.00 3.49
2172 2225 0.969917 AGATGACACGGAGAGCTGCT 60.970 55.000 0.00 0.00 0.00 4.24
2173 2226 0.805322 CAGATGACACGGAGAGCTGC 60.805 60.000 0.00 0.00 0.00 5.25
2174 2227 0.529833 ACAGATGACACGGAGAGCTG 59.470 55.000 0.00 0.00 0.00 4.24
2175 2228 2.020720 CTACAGATGACACGGAGAGCT 58.979 52.381 0.00 0.00 0.00 4.09
2176 2229 1.066303 CCTACAGATGACACGGAGAGC 59.934 57.143 0.00 0.00 0.00 4.09
2177 2230 2.370349 ACCTACAGATGACACGGAGAG 58.630 52.381 0.00 0.00 0.00 3.20
2178 2231 2.509166 ACCTACAGATGACACGGAGA 57.491 50.000 0.00 0.00 0.00 3.71
2179 2232 2.033550 GCTACCTACAGATGACACGGAG 59.966 54.545 0.00 0.00 0.00 4.63
2180 2233 2.022195 GCTACCTACAGATGACACGGA 58.978 52.381 0.00 0.00 0.00 4.69
2181 2234 1.268589 CGCTACCTACAGATGACACGG 60.269 57.143 0.00 0.00 0.00 4.94
2182 2235 1.268589 CCGCTACCTACAGATGACACG 60.269 57.143 0.00 0.00 0.00 4.49
2183 2236 1.749634 ACCGCTACCTACAGATGACAC 59.250 52.381 0.00 0.00 0.00 3.67
2184 2237 2.139323 ACCGCTACCTACAGATGACA 57.861 50.000 0.00 0.00 0.00 3.58
2185 2238 5.243981 TCTATACCGCTACCTACAGATGAC 58.756 45.833 0.00 0.00 0.00 3.06
2186 2239 5.494390 TCTATACCGCTACCTACAGATGA 57.506 43.478 0.00 0.00 0.00 2.92
2187 2240 6.017770 GCTATCTATACCGCTACCTACAGATG 60.018 46.154 0.00 0.00 0.00 2.90
2188 2241 6.056884 GCTATCTATACCGCTACCTACAGAT 58.943 44.000 0.00 0.00 0.00 2.90
2189 2242 5.189342 AGCTATCTATACCGCTACCTACAGA 59.811 44.000 0.00 0.00 0.00 3.41
2190 2243 5.430007 AGCTATCTATACCGCTACCTACAG 58.570 45.833 0.00 0.00 0.00 2.74
2191 2244 5.432680 AGCTATCTATACCGCTACCTACA 57.567 43.478 0.00 0.00 0.00 2.74
2192 2245 8.987890 GTATAAGCTATCTATACCGCTACCTAC 58.012 40.741 3.56 0.00 31.48 3.18
2193 2246 8.708378 TGTATAAGCTATCTATACCGCTACCTA 58.292 37.037 10.26 0.00 31.48 3.08
2194 2247 7.571919 TGTATAAGCTATCTATACCGCTACCT 58.428 38.462 10.26 0.00 31.48 3.08
2195 2248 7.798596 TGTATAAGCTATCTATACCGCTACC 57.201 40.000 10.26 0.00 31.48 3.18
2196 2249 8.671921 TGTTGTATAAGCTATCTATACCGCTAC 58.328 37.037 10.26 5.71 31.48 3.58
2197 2250 8.797350 TGTTGTATAAGCTATCTATACCGCTA 57.203 34.615 10.26 0.00 31.48 4.26
2198 2251 7.610692 TCTGTTGTATAAGCTATCTATACCGCT 59.389 37.037 10.26 0.00 0.00 5.52
2199 2252 7.697291 GTCTGTTGTATAAGCTATCTATACCGC 59.303 40.741 10.26 5.40 0.00 5.68
2200 2253 8.948145 AGTCTGTTGTATAAGCTATCTATACCG 58.052 37.037 10.26 0.43 0.00 4.02
2204 2257 9.581289 AGACAGTCTGTTGTATAAGCTATCTAT 57.419 33.333 7.00 0.00 0.00 1.98
2205 2258 8.982091 AGACAGTCTGTTGTATAAGCTATCTA 57.018 34.615 7.00 0.00 0.00 1.98
2206 2259 7.889873 AGACAGTCTGTTGTATAAGCTATCT 57.110 36.000 7.00 0.00 0.00 1.98
2207 2260 8.934507 AAAGACAGTCTGTTGTATAAGCTATC 57.065 34.615 7.00 0.00 0.00 2.08
2208 2261 8.754080 AGAAAGACAGTCTGTTGTATAAGCTAT 58.246 33.333 7.00 0.00 0.00 2.97
2209 2262 8.123639 AGAAAGACAGTCTGTTGTATAAGCTA 57.876 34.615 7.00 0.00 0.00 3.32
2210 2263 6.998802 AGAAAGACAGTCTGTTGTATAAGCT 58.001 36.000 7.00 0.00 0.00 3.74
2211 2264 8.030106 ACTAGAAAGACAGTCTGTTGTATAAGC 58.970 37.037 7.00 0.00 0.00 3.09
2212 2265 9.915629 AACTAGAAAGACAGTCTGTTGTATAAG 57.084 33.333 7.00 4.63 0.00 1.73
2213 2266 9.692749 CAACTAGAAAGACAGTCTGTTGTATAA 57.307 33.333 17.07 0.00 33.82 0.98
2214 2267 8.857098 ACAACTAGAAAGACAGTCTGTTGTATA 58.143 33.333 24.57 6.38 40.92 1.47
2215 2268 7.727181 ACAACTAGAAAGACAGTCTGTTGTAT 58.273 34.615 24.57 9.80 40.92 2.29
2216 2269 7.068348 AGACAACTAGAAAGACAGTCTGTTGTA 59.932 37.037 25.31 14.59 41.72 2.41
2217 2270 5.978814 ACAACTAGAAAGACAGTCTGTTGT 58.021 37.500 22.05 22.05 39.62 3.32
2218 2271 6.276847 AGACAACTAGAAAGACAGTCTGTTG 58.723 40.000 21.09 21.09 38.57 3.33
2219 2272 6.472686 AGACAACTAGAAAGACAGTCTGTT 57.527 37.500 7.00 0.42 33.60 3.16
2220 2273 7.768807 ATAGACAACTAGAAAGACAGTCTGT 57.231 36.000 4.81 4.81 35.20 3.41
2221 2274 9.562583 GTTATAGACAACTAGAAAGACAGTCTG 57.437 37.037 3.05 0.00 35.20 3.51
2222 2275 9.298250 TGTTATAGACAACTAGAAAGACAGTCT 57.702 33.333 0.00 0.00 34.69 3.24
2246 2299 9.883142 TGTGGAGTTTTTCTCATTTTTAAATGT 57.117 25.926 13.28 0.00 44.66 2.71
2249 2302 8.878769 GCTTGTGGAGTTTTTCTCATTTTTAAA 58.121 29.630 0.00 0.00 44.40 1.52
2250 2303 8.257306 AGCTTGTGGAGTTTTTCTCATTTTTAA 58.743 29.630 0.00 0.00 44.40 1.52
2251 2304 7.781056 AGCTTGTGGAGTTTTTCTCATTTTTA 58.219 30.769 0.00 0.00 44.40 1.52
2252 2305 6.643388 AGCTTGTGGAGTTTTTCTCATTTTT 58.357 32.000 0.00 0.00 44.40 1.94
2253 2306 6.127366 TGAGCTTGTGGAGTTTTTCTCATTTT 60.127 34.615 0.00 0.00 44.40 1.82
2254 2307 5.360714 TGAGCTTGTGGAGTTTTTCTCATTT 59.639 36.000 0.00 0.00 44.40 2.32
2255 2308 4.889409 TGAGCTTGTGGAGTTTTTCTCATT 59.111 37.500 0.00 0.00 44.40 2.57
2256 2309 4.464008 TGAGCTTGTGGAGTTTTTCTCAT 58.536 39.130 0.00 0.00 44.40 2.90
2257 2310 3.879295 CTGAGCTTGTGGAGTTTTTCTCA 59.121 43.478 0.00 0.00 44.40 3.27
2258 2311 3.879892 ACTGAGCTTGTGGAGTTTTTCTC 59.120 43.478 0.00 0.00 42.07 2.87
2259 2312 3.891049 ACTGAGCTTGTGGAGTTTTTCT 58.109 40.909 0.00 0.00 0.00 2.52
2260 2313 4.498177 GGAACTGAGCTTGTGGAGTTTTTC 60.498 45.833 0.00 0.00 0.00 2.29
2261 2314 3.381590 GGAACTGAGCTTGTGGAGTTTTT 59.618 43.478 0.00 0.00 0.00 1.94
2262 2315 2.952310 GGAACTGAGCTTGTGGAGTTTT 59.048 45.455 0.00 0.00 0.00 2.43
2263 2316 2.173569 AGGAACTGAGCTTGTGGAGTTT 59.826 45.455 0.00 0.00 37.18 2.66
2264 2317 1.771255 AGGAACTGAGCTTGTGGAGTT 59.229 47.619 0.00 0.00 37.18 3.01
2265 2318 1.428869 AGGAACTGAGCTTGTGGAGT 58.571 50.000 0.00 0.00 37.18 3.85
2266 2319 3.685139 TTAGGAACTGAGCTTGTGGAG 57.315 47.619 0.00 0.00 41.52 3.86
2267 2320 4.640771 AATTAGGAACTGAGCTTGTGGA 57.359 40.909 0.00 0.00 41.52 4.02
2268 2321 6.599244 TGATTAATTAGGAACTGAGCTTGTGG 59.401 38.462 0.00 0.00 41.52 4.17
2269 2322 7.615582 TGATTAATTAGGAACTGAGCTTGTG 57.384 36.000 0.00 0.00 41.52 3.33
2270 2323 8.814038 AATGATTAATTAGGAACTGAGCTTGT 57.186 30.769 0.00 0.00 41.52 3.16
2271 2324 8.348507 GGAATGATTAATTAGGAACTGAGCTTG 58.651 37.037 0.00 0.00 41.52 4.01
2272 2325 8.055181 TGGAATGATTAATTAGGAACTGAGCTT 58.945 33.333 0.00 0.00 41.52 3.74
2273 2326 7.577303 TGGAATGATTAATTAGGAACTGAGCT 58.423 34.615 0.00 0.00 41.52 4.09
2274 2327 7.807977 TGGAATGATTAATTAGGAACTGAGC 57.192 36.000 0.00 0.00 41.52 4.26
2277 2330 9.252962 GCATTTGGAATGATTAATTAGGAACTG 57.747 33.333 4.92 0.00 41.52 3.16
2278 2331 8.980596 TGCATTTGGAATGATTAATTAGGAACT 58.019 29.630 4.92 0.00 46.37 3.01
2279 2332 9.252962 CTGCATTTGGAATGATTAATTAGGAAC 57.747 33.333 4.92 0.00 0.00 3.62
2280 2333 8.423349 CCTGCATTTGGAATGATTAATTAGGAA 58.577 33.333 4.92 0.00 0.00 3.36
2281 2334 7.471819 GCCTGCATTTGGAATGATTAATTAGGA 60.472 37.037 4.92 0.00 0.00 2.94
2282 2335 6.647895 GCCTGCATTTGGAATGATTAATTAGG 59.352 38.462 4.92 0.00 0.00 2.69
2283 2336 7.439381 AGCCTGCATTTGGAATGATTAATTAG 58.561 34.615 4.92 0.00 0.00 1.73
2284 2337 7.364149 AGCCTGCATTTGGAATGATTAATTA 57.636 32.000 4.92 0.00 0.00 1.40
2285 2338 6.243216 AGCCTGCATTTGGAATGATTAATT 57.757 33.333 4.92 0.00 0.00 1.40
2286 2339 5.221581 GGAGCCTGCATTTGGAATGATTAAT 60.222 40.000 4.92 0.00 0.00 1.40
2287 2340 4.099881 GGAGCCTGCATTTGGAATGATTAA 59.900 41.667 4.92 0.00 0.00 1.40
2288 2341 3.638160 GGAGCCTGCATTTGGAATGATTA 59.362 43.478 4.92 0.00 0.00 1.75
2289 2342 2.433239 GGAGCCTGCATTTGGAATGATT 59.567 45.455 4.92 0.00 0.00 2.57
2290 2343 2.037144 GGAGCCTGCATTTGGAATGAT 58.963 47.619 4.92 0.00 0.00 2.45
2291 2344 1.006281 AGGAGCCTGCATTTGGAATGA 59.994 47.619 4.92 0.00 0.00 2.57
2292 2345 1.481871 AGGAGCCTGCATTTGGAATG 58.518 50.000 0.00 0.00 0.00 2.67
2293 2346 2.242882 AAGGAGCCTGCATTTGGAAT 57.757 45.000 0.00 0.00 0.00 3.01
2294 2347 2.014010 AAAGGAGCCTGCATTTGGAA 57.986 45.000 0.00 0.00 0.00 3.53
2295 2348 1.895131 GAAAAGGAGCCTGCATTTGGA 59.105 47.619 0.00 0.00 0.00 3.53
2296 2349 1.403249 CGAAAAGGAGCCTGCATTTGG 60.403 52.381 0.00 0.00 0.00 3.28
2297 2350 1.541147 TCGAAAAGGAGCCTGCATTTG 59.459 47.619 0.00 0.00 0.00 2.32
2298 2351 1.909700 TCGAAAAGGAGCCTGCATTT 58.090 45.000 0.00 0.00 0.00 2.32
2299 2352 1.909700 TTCGAAAAGGAGCCTGCATT 58.090 45.000 0.00 0.00 0.00 3.56
2300 2353 2.134789 ATTCGAAAAGGAGCCTGCAT 57.865 45.000 0.00 0.00 0.00 3.96
2301 2354 1.909700 AATTCGAAAAGGAGCCTGCA 58.090 45.000 0.00 0.00 0.00 4.41
2302 2355 3.010420 AGTAATTCGAAAAGGAGCCTGC 58.990 45.455 0.00 0.00 0.00 4.85
2303 2356 4.455877 ACAAGTAATTCGAAAAGGAGCCTG 59.544 41.667 0.00 0.00 0.00 4.85
2304 2357 4.652822 ACAAGTAATTCGAAAAGGAGCCT 58.347 39.130 0.00 0.00 0.00 4.58
2305 2358 4.695928 AGACAAGTAATTCGAAAAGGAGCC 59.304 41.667 0.00 0.00 0.00 4.70
2306 2359 5.864628 AGACAAGTAATTCGAAAAGGAGC 57.135 39.130 0.00 0.00 0.00 4.70
2307 2360 8.758633 TCTAAGACAAGTAATTCGAAAAGGAG 57.241 34.615 0.00 0.00 0.00 3.69
2308 2361 9.720769 AATCTAAGACAAGTAATTCGAAAAGGA 57.279 29.630 0.00 0.00 0.00 3.36
2333 2386 9.594478 TGCTTGATATCTTCGTATCTAAACAAA 57.406 29.630 3.98 0.00 33.26 2.83
2334 2387 9.031360 GTGCTTGATATCTTCGTATCTAAACAA 57.969 33.333 3.98 0.00 33.26 2.83
2335 2388 8.414003 AGTGCTTGATATCTTCGTATCTAAACA 58.586 33.333 3.98 0.00 33.26 2.83
2336 2389 8.804688 AGTGCTTGATATCTTCGTATCTAAAC 57.195 34.615 3.98 0.00 33.26 2.01
2340 2393 9.416794 CATTTAGTGCTTGATATCTTCGTATCT 57.583 33.333 3.98 0.00 33.26 1.98
2341 2394 9.411801 TCATTTAGTGCTTGATATCTTCGTATC 57.588 33.333 3.98 0.00 0.00 2.24
2342 2395 9.416794 CTCATTTAGTGCTTGATATCTTCGTAT 57.583 33.333 3.98 0.00 0.00 3.06
2343 2396 8.414003 ACTCATTTAGTGCTTGATATCTTCGTA 58.586 33.333 3.98 0.00 36.93 3.43
2344 2397 7.268586 ACTCATTTAGTGCTTGATATCTTCGT 58.731 34.615 3.98 0.00 36.93 3.85
2345 2398 7.651304 AGACTCATTTAGTGCTTGATATCTTCG 59.349 37.037 3.98 0.00 39.07 3.79
2346 2399 8.885494 AGACTCATTTAGTGCTTGATATCTTC 57.115 34.615 3.98 0.00 39.07 2.87
2347 2400 9.979578 CTAGACTCATTTAGTGCTTGATATCTT 57.020 33.333 3.98 0.00 39.07 2.40
2348 2401 9.360901 TCTAGACTCATTTAGTGCTTGATATCT 57.639 33.333 3.98 0.00 39.07 1.98
2352 2405 8.918116 TGTATCTAGACTCATTTAGTGCTTGAT 58.082 33.333 0.00 0.00 39.07 2.57
2353 2406 8.293699 TGTATCTAGACTCATTTAGTGCTTGA 57.706 34.615 0.00 0.00 39.07 3.02
2354 2407 9.190858 GATGTATCTAGACTCATTTAGTGCTTG 57.809 37.037 11.25 0.00 39.07 4.01
2355 2408 8.364142 GGATGTATCTAGACTCATTTAGTGCTT 58.636 37.037 11.25 0.00 39.07 3.91
2356 2409 7.507277 TGGATGTATCTAGACTCATTTAGTGCT 59.493 37.037 11.25 0.00 39.07 4.40
2357 2410 7.661968 TGGATGTATCTAGACTCATTTAGTGC 58.338 38.462 11.25 1.07 39.07 4.40
2376 2429 9.862371 GTCTTCGATTTGTCTATATATGGATGT 57.138 33.333 1.74 0.00 0.00 3.06
2377 2430 9.860898 TGTCTTCGATTTGTCTATATATGGATG 57.139 33.333 1.74 0.00 0.00 3.51
2379 2432 9.914131 CTTGTCTTCGATTTGTCTATATATGGA 57.086 33.333 0.00 0.00 0.00 3.41
2380 2433 9.698309 ACTTGTCTTCGATTTGTCTATATATGG 57.302 33.333 0.00 0.00 0.00 2.74
2386 2439 8.883731 CCAATTACTTGTCTTCGATTTGTCTAT 58.116 33.333 0.00 0.00 0.00 1.98
2387 2440 7.333423 CCCAATTACTTGTCTTCGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
2388 2441 6.149474 CCCAATTACTTGTCTTCGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
2389 2442 6.148811 TCCCAATTACTTGTCTTCGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
2390 2443 6.001460 TCCCAATTACTTGTCTTCGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
2391 2444 6.494893 TCCCAATTACTTGTCTTCGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
2392 2445 6.348213 CGTTCCCAATTACTTGTCTTCGATTT 60.348 38.462 0.00 0.00 0.00 2.17
2393 2446 5.121768 CGTTCCCAATTACTTGTCTTCGATT 59.878 40.000 0.00 0.00 0.00 3.34
2394 2447 4.630069 CGTTCCCAATTACTTGTCTTCGAT 59.370 41.667 0.00 0.00 0.00 3.59
2395 2448 3.991773 CGTTCCCAATTACTTGTCTTCGA 59.008 43.478 0.00 0.00 0.00 3.71
2396 2449 3.124636 CCGTTCCCAATTACTTGTCTTCG 59.875 47.826 0.00 0.00 0.00 3.79
2397 2450 4.320870 TCCGTTCCCAATTACTTGTCTTC 58.679 43.478 0.00 0.00 0.00 2.87
2398 2451 4.324267 CTCCGTTCCCAATTACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
2399 2452 3.307480 CCTCCGTTCCCAATTACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
2400 2453 3.007635 CCTCCGTTCCCAATTACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
2401 2454 2.640826 TCCTCCGTTCCCAATTACTTGT 59.359 45.455 0.00 0.00 0.00 3.16
2402 2455 3.343941 TCCTCCGTTCCCAATTACTTG 57.656 47.619 0.00 0.00 0.00 3.16
2403 2456 3.329814 ACTTCCTCCGTTCCCAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
2404 2457 2.910977 ACTTCCTCCGTTCCCAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2405 2458 3.345508 ACTTCCTCCGTTCCCAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2406 2459 5.703730 ATTACTTCCTCCGTTCCCAATTA 57.296 39.130 0.00 0.00 0.00 1.40
2407 2460 4.586306 ATTACTTCCTCCGTTCCCAATT 57.414 40.909 0.00 0.00 0.00 2.32
2408 2461 4.586306 AATTACTTCCTCCGTTCCCAAT 57.414 40.909 0.00 0.00 0.00 3.16
2409 2462 4.076394 CAAATTACTTCCTCCGTTCCCAA 58.924 43.478 0.00 0.00 0.00 4.12
2410 2463 3.681593 CAAATTACTTCCTCCGTTCCCA 58.318 45.455 0.00 0.00 0.00 4.37
2411 2464 2.422479 GCAAATTACTTCCTCCGTTCCC 59.578 50.000 0.00 0.00 0.00 3.97
2412 2465 3.078837 TGCAAATTACTTCCTCCGTTCC 58.921 45.455 0.00 0.00 0.00 3.62
2413 2466 4.000988 TCTGCAAATTACTTCCTCCGTTC 58.999 43.478 0.00 0.00 0.00 3.95
2414 2467 4.003648 CTCTGCAAATTACTTCCTCCGTT 58.996 43.478 0.00 0.00 0.00 4.44
2415 2468 3.260884 TCTCTGCAAATTACTTCCTCCGT 59.739 43.478 0.00 0.00 0.00 4.69
2416 2469 3.861840 TCTCTGCAAATTACTTCCTCCG 58.138 45.455 0.00 0.00 0.00 4.63
2417 2470 4.837972 ACTCTCTGCAAATTACTTCCTCC 58.162 43.478 0.00 0.00 0.00 4.30
2418 2471 5.482908 TGACTCTCTGCAAATTACTTCCTC 58.517 41.667 0.00 0.00 0.00 3.71
2419 2472 5.489792 TGACTCTCTGCAAATTACTTCCT 57.510 39.130 0.00 0.00 0.00 3.36
2420 2473 5.448360 GCATGACTCTCTGCAAATTACTTCC 60.448 44.000 0.00 0.00 38.28 3.46
2421 2474 5.448360 GGCATGACTCTCTGCAAATTACTTC 60.448 44.000 0.00 0.00 40.18 3.01
2422 2475 4.397417 GGCATGACTCTCTGCAAATTACTT 59.603 41.667 0.00 0.00 40.18 2.24
2423 2476 3.944015 GGCATGACTCTCTGCAAATTACT 59.056 43.478 0.00 0.00 40.18 2.24
2424 2477 3.691118 TGGCATGACTCTCTGCAAATTAC 59.309 43.478 0.00 0.00 40.18 1.89
2425 2478 3.691118 GTGGCATGACTCTCTGCAAATTA 59.309 43.478 0.00 0.00 40.18 1.40
2426 2479 2.490903 GTGGCATGACTCTCTGCAAATT 59.509 45.455 0.00 0.00 40.18 1.82
2427 2480 2.089980 GTGGCATGACTCTCTGCAAAT 58.910 47.619 0.00 0.00 40.18 2.32
2428 2481 1.527034 GTGGCATGACTCTCTGCAAA 58.473 50.000 0.00 0.00 40.18 3.68
2429 2482 0.321919 GGTGGCATGACTCTCTGCAA 60.322 55.000 0.00 0.00 40.18 4.08
2430 2483 1.297689 GGTGGCATGACTCTCTGCA 59.702 57.895 0.00 0.00 40.18 4.41
2431 2484 0.107312 ATGGTGGCATGACTCTCTGC 60.107 55.000 0.00 0.00 37.66 4.26
2432 2485 1.664873 CATGGTGGCATGACTCTCTG 58.335 55.000 0.00 0.00 34.66 3.35
2433 2486 0.107312 GCATGGTGGCATGACTCTCT 60.107 55.000 0.00 0.00 34.66 3.10
2434 2487 1.434622 CGCATGGTGGCATGACTCTC 61.435 60.000 0.00 0.00 34.66 3.20
2435 2488 1.450848 CGCATGGTGGCATGACTCT 60.451 57.895 0.00 0.00 34.66 3.24
2436 2489 3.104766 CGCATGGTGGCATGACTC 58.895 61.111 0.00 0.00 34.66 3.36
2437 2490 3.136123 GCGCATGGTGGCATGACT 61.136 61.111 0.30 0.00 34.66 3.41
2438 2491 3.405592 CTGCGCATGGTGGCATGAC 62.406 63.158 12.24 0.00 38.69 3.06
2439 2492 3.135457 CTGCGCATGGTGGCATGA 61.135 61.111 12.24 0.00 38.69 3.07
2440 2493 3.445687 ACTGCGCATGGTGGCATG 61.446 61.111 12.24 0.00 38.69 4.06
2441 2494 3.445687 CACTGCGCATGGTGGCAT 61.446 61.111 19.13 0.00 38.69 4.40
2453 2506 4.530857 ATACGGAGCCGGCACTGC 62.531 66.667 29.73 14.69 44.69 4.40
2454 2507 2.279517 GATACGGAGCCGGCACTG 60.280 66.667 31.54 29.83 44.69 3.66
2455 2508 2.758327 TGATACGGAGCCGGCACT 60.758 61.111 31.54 9.09 44.69 4.40
2456 2509 2.585247 GTGATACGGAGCCGGCAC 60.585 66.667 31.54 23.95 44.69 5.01
2457 2510 4.201679 CGTGATACGGAGCCGGCA 62.202 66.667 31.54 7.75 44.69 5.69
2459 2512 4.201679 TGCGTGATACGGAGCCGG 62.202 66.667 14.07 0.00 42.82 6.13
2464 2517 1.141019 GGAAGCTGCGTGATACGGA 59.859 57.895 3.41 0.00 42.82 4.69
2465 2518 1.153647 TGGAAGCTGCGTGATACGG 60.154 57.895 3.41 0.00 42.82 4.02
2466 2519 1.742900 CGTGGAAGCTGCGTGATACG 61.743 60.000 0.00 0.00 45.88 3.06
2467 2520 0.457853 TCGTGGAAGCTGCGTGATAC 60.458 55.000 0.00 0.00 0.00 2.24
2468 2521 0.245266 TTCGTGGAAGCTGCGTGATA 59.755 50.000 0.00 0.00 0.00 2.15
2469 2522 1.005037 TTCGTGGAAGCTGCGTGAT 60.005 52.632 0.00 0.00 0.00 3.06
2470 2523 1.664649 CTTCGTGGAAGCTGCGTGA 60.665 57.895 0.00 0.00 32.78 4.35
2471 2524 1.664649 TCTTCGTGGAAGCTGCGTG 60.665 57.895 0.00 0.00 39.29 5.34
2472 2525 1.664965 GTCTTCGTGGAAGCTGCGT 60.665 57.895 0.53 0.00 39.29 5.24
2473 2526 2.720758 CGTCTTCGTGGAAGCTGCG 61.721 63.158 0.53 2.50 39.29 5.18
2474 2527 0.944311 TTCGTCTTCGTGGAAGCTGC 60.944 55.000 0.53 0.00 39.29 5.25
2475 2528 1.497991 TTTCGTCTTCGTGGAAGCTG 58.502 50.000 0.53 0.00 39.29 4.24
2476 2529 2.234300 TTTTCGTCTTCGTGGAAGCT 57.766 45.000 0.53 0.00 39.29 3.74
2477 2530 3.537793 AATTTTCGTCTTCGTGGAAGC 57.462 42.857 0.53 0.00 39.29 3.86
2478 2531 4.844267 ACAAATTTTCGTCTTCGTGGAAG 58.156 39.130 0.00 0.00 40.65 3.46
2479 2532 4.886247 ACAAATTTTCGTCTTCGTGGAA 57.114 36.364 0.00 0.00 38.33 3.53
2480 2533 5.987777 TTACAAATTTTCGTCTTCGTGGA 57.012 34.783 0.00 0.00 38.33 4.02
2481 2534 7.377397 TGATTTTACAAATTTTCGTCTTCGTGG 59.623 33.333 0.00 0.00 38.33 4.94
2482 2535 8.264022 TGATTTTACAAATTTTCGTCTTCGTG 57.736 30.769 0.00 0.00 38.33 4.35
2483 2536 8.844441 TTGATTTTACAAATTTTCGTCTTCGT 57.156 26.923 0.00 0.00 38.33 3.85
2503 2556 9.859152 CTCTAGATTTTCCTCCCTTAATTGATT 57.141 33.333 0.00 0.00 0.00 2.57
2504 2557 9.230477 TCTCTAGATTTTCCTCCCTTAATTGAT 57.770 33.333 0.00 0.00 0.00 2.57
2505 2558 8.624019 TCTCTAGATTTTCCTCCCTTAATTGA 57.376 34.615 0.00 0.00 0.00 2.57
2506 2559 8.709308 TCTCTCTAGATTTTCCTCCCTTAATTG 58.291 37.037 0.00 0.00 0.00 2.32
2507 2560 8.710239 GTCTCTCTAGATTTTCCTCCCTTAATT 58.290 37.037 0.00 0.00 33.30 1.40
2508 2561 7.014808 CGTCTCTCTAGATTTTCCTCCCTTAAT 59.985 40.741 0.00 0.00 33.30 1.40
2509 2562 6.321690 CGTCTCTCTAGATTTTCCTCCCTTAA 59.678 42.308 0.00 0.00 33.30 1.85
2510 2563 5.828859 CGTCTCTCTAGATTTTCCTCCCTTA 59.171 44.000 0.00 0.00 33.30 2.69
2511 2564 4.647399 CGTCTCTCTAGATTTTCCTCCCTT 59.353 45.833 0.00 0.00 33.30 3.95
2512 2565 4.211920 CGTCTCTCTAGATTTTCCTCCCT 58.788 47.826 0.00 0.00 33.30 4.20
2513 2566 3.319689 CCGTCTCTCTAGATTTTCCTCCC 59.680 52.174 0.00 0.00 33.30 4.30
2514 2567 4.208746 TCCGTCTCTCTAGATTTTCCTCC 58.791 47.826 0.00 0.00 33.30 4.30
2515 2568 5.127491 TCTCCGTCTCTCTAGATTTTCCTC 58.873 45.833 0.00 0.00 33.30 3.71
2516 2569 5.118729 TCTCCGTCTCTCTAGATTTTCCT 57.881 43.478 0.00 0.00 33.30 3.36
2517 2570 5.591067 TCTTCTCCGTCTCTCTAGATTTTCC 59.409 44.000 0.00 0.00 33.30 3.13
2518 2571 6.687081 TCTTCTCCGTCTCTCTAGATTTTC 57.313 41.667 0.00 0.00 33.30 2.29
2519 2572 6.693315 CTCTTCTCCGTCTCTCTAGATTTT 57.307 41.667 0.00 0.00 33.30 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.