Multiple sequence alignment - TraesCS3A01G113000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G113000 chr3A 100.000 2691 0 0 1 2691 80290478 80287788 0.000000e+00 4970
1 TraesCS3A01G113000 chr3A 89.186 823 58 18 805 1610 80412894 80413702 0.000000e+00 998
2 TraesCS3A01G113000 chr3A 92.966 654 40 3 11 663 623905153 623905801 0.000000e+00 948
3 TraesCS3A01G113000 chr3A 84.478 393 32 16 1642 2020 80410186 80409809 7.080000e-96 361
4 TraesCS3A01G113000 chr3B 91.231 1357 80 21 684 2026 113503408 113504739 0.000000e+00 1810
5 TraesCS3A01G113000 chr3B 87.063 1260 97 35 805 2020 112836247 112835010 0.000000e+00 1363
6 TraesCS3A01G113000 chr3B 85.650 1115 96 34 805 1886 112948598 112947515 0.000000e+00 1114
7 TraesCS3A01G113000 chr3B 87.662 770 71 17 805 1557 112465856 112465094 0.000000e+00 874
8 TraesCS3A01G113000 chr3B 87.680 763 62 20 839 1581 112497323 112496573 0.000000e+00 859
9 TraesCS3A01G113000 chr3B 88.531 715 52 17 803 1501 113483291 113483991 0.000000e+00 839
10 TraesCS3A01G113000 chr3B 89.083 687 45 14 855 1512 113512752 113512067 0.000000e+00 826
11 TraesCS3A01G113000 chr3B 91.617 167 11 2 1854 2020 113298297 113298134 7.490000e-56 228
12 TraesCS3A01G113000 chr3B 80.597 335 28 19 1495 1802 113487282 113487606 9.700000e-55 224
13 TraesCS3A01G113000 chr3B 86.525 141 13 6 1882 2020 113487631 113487767 1.670000e-32 150
14 TraesCS3A01G113000 chr7B 91.748 1030 63 13 663 1683 603656889 603657905 0.000000e+00 1411
15 TraesCS3A01G113000 chr7B 89.134 681 63 9 1 673 556690618 556689941 0.000000e+00 837
16 TraesCS3A01G113000 chr4D 90.072 1118 68 22 742 1837 134563021 134564117 0.000000e+00 1410
17 TraesCS3A01G113000 chr4D 90.625 672 52 7 1 662 274216819 274217489 0.000000e+00 881
18 TraesCS3A01G113000 chr4D 90.448 670 56 4 1 662 47248492 47249161 0.000000e+00 876
19 TraesCS3A01G113000 chr3D 87.341 1256 90 36 805 2020 68430343 68431569 0.000000e+00 1375
20 TraesCS3A01G113000 chr3D 92.157 867 52 8 739 1603 68325859 68325007 0.000000e+00 1210
21 TraesCS3A01G113000 chr3D 88.185 931 62 21 841 1736 68388985 68389902 0.000000e+00 1066
22 TraesCS3A01G113000 chr3D 89.796 686 32 17 860 1512 68170085 68170765 0.000000e+00 845
23 TraesCS3A01G113000 chr3D 88.605 430 32 11 1645 2067 68325013 68324594 8.600000e-140 507
24 TraesCS3A01G113000 chr3D 84.889 225 17 9 1635 1852 68335236 68335022 7.550000e-51 211
25 TraesCS3A01G113000 chr3D 89.423 104 6 4 1921 2020 68329373 68329271 2.810000e-25 126
26 TraesCS3A01G113000 chr3D 91.304 92 5 2 1929 2020 68335018 68334930 3.640000e-24 122
27 TraesCS3A01G113000 chr6D 91.085 673 51 5 1 665 292036108 292035437 0.000000e+00 902
28 TraesCS3A01G113000 chr6D 89.231 195 18 2 2076 2267 7488356 7488550 9.630000e-60 241
29 TraesCS3A01G113000 chr6D 88.205 195 20 2 2076 2267 7497689 7497883 2.080000e-56 230
30 TraesCS3A01G113000 chr5D 91.085 673 49 7 1 663 526658342 526659013 0.000000e+00 900
31 TraesCS3A01G113000 chr5D 89.926 675 52 11 1 664 65978093 65978762 0.000000e+00 856
32 TraesCS3A01G113000 chr7D 90.667 675 51 8 1 665 34179395 34178723 0.000000e+00 887
33 TraesCS3A01G113000 chr7D 90.504 674 49 10 1 663 54987584 54988253 0.000000e+00 876
34 TraesCS3A01G113000 chr7D 90.055 181 16 1 2077 2255 17234415 17234595 1.610000e-57 233
35 TraesCS3A01G113000 chr7D 89.305 187 16 3 2078 2261 36619782 36619967 5.790000e-57 231
36 TraesCS3A01G113000 chr7D 90.341 176 15 1 2082 2255 499739408 499739583 2.080000e-56 230
37 TraesCS3A01G113000 chr6A 91.620 179 12 2 2082 2257 211932458 211932636 7.440000e-61 244
38 TraesCS3A01G113000 chrUn 87.692 195 21 2 2076 2267 364646097 364645903 9.700000e-55 224
39 TraesCS3A01G113000 chrUn 87.692 195 21 2 2076 2267 364651252 364651446 9.700000e-55 224
40 TraesCS3A01G113000 chr2B 89.130 184 15 4 2082 2261 17264601 17264419 9.700000e-55 224
41 TraesCS3A01G113000 chr2B 85.000 120 18 0 2572 2691 647745240 647745359 3.640000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G113000 chr3A 80287788 80290478 2690 True 4970.000000 4970 100.000000 1 2691 1 chr3A.!!$R1 2690
1 TraesCS3A01G113000 chr3A 80412894 80413702 808 False 998.000000 998 89.186000 805 1610 1 chr3A.!!$F1 805
2 TraesCS3A01G113000 chr3A 623905153 623905801 648 False 948.000000 948 92.966000 11 663 1 chr3A.!!$F2 652
3 TraesCS3A01G113000 chr3B 113503408 113504739 1331 False 1810.000000 1810 91.231000 684 2026 1 chr3B.!!$F1 1342
4 TraesCS3A01G113000 chr3B 112835010 112836247 1237 True 1363.000000 1363 87.063000 805 2020 1 chr3B.!!$R3 1215
5 TraesCS3A01G113000 chr3B 112947515 112948598 1083 True 1114.000000 1114 85.650000 805 1886 1 chr3B.!!$R4 1081
6 TraesCS3A01G113000 chr3B 112465094 112465856 762 True 874.000000 874 87.662000 805 1557 1 chr3B.!!$R1 752
7 TraesCS3A01G113000 chr3B 112496573 112497323 750 True 859.000000 859 87.680000 839 1581 1 chr3B.!!$R2 742
8 TraesCS3A01G113000 chr3B 113512067 113512752 685 True 826.000000 826 89.083000 855 1512 1 chr3B.!!$R6 657
9 TraesCS3A01G113000 chr3B 113483291 113487767 4476 False 404.333333 839 85.217667 803 2020 3 chr3B.!!$F2 1217
10 TraesCS3A01G113000 chr7B 603656889 603657905 1016 False 1411.000000 1411 91.748000 663 1683 1 chr7B.!!$F1 1020
11 TraesCS3A01G113000 chr7B 556689941 556690618 677 True 837.000000 837 89.134000 1 673 1 chr7B.!!$R1 672
12 TraesCS3A01G113000 chr4D 134563021 134564117 1096 False 1410.000000 1410 90.072000 742 1837 1 chr4D.!!$F2 1095
13 TraesCS3A01G113000 chr4D 274216819 274217489 670 False 881.000000 881 90.625000 1 662 1 chr4D.!!$F3 661
14 TraesCS3A01G113000 chr4D 47248492 47249161 669 False 876.000000 876 90.448000 1 662 1 chr4D.!!$F1 661
15 TraesCS3A01G113000 chr3D 68430343 68431569 1226 False 1375.000000 1375 87.341000 805 2020 1 chr3D.!!$F3 1215
16 TraesCS3A01G113000 chr3D 68388985 68389902 917 False 1066.000000 1066 88.185000 841 1736 1 chr3D.!!$F2 895
17 TraesCS3A01G113000 chr3D 68170085 68170765 680 False 845.000000 845 89.796000 860 1512 1 chr3D.!!$F1 652
18 TraesCS3A01G113000 chr3D 68324594 68329373 4779 True 614.333333 1210 90.061667 739 2067 3 chr3D.!!$R1 1328
19 TraesCS3A01G113000 chr6D 292035437 292036108 671 True 902.000000 902 91.085000 1 665 1 chr6D.!!$R1 664
20 TraesCS3A01G113000 chr5D 526658342 526659013 671 False 900.000000 900 91.085000 1 663 1 chr5D.!!$F2 662
21 TraesCS3A01G113000 chr5D 65978093 65978762 669 False 856.000000 856 89.926000 1 664 1 chr5D.!!$F1 663
22 TraesCS3A01G113000 chr7D 34178723 34179395 672 True 887.000000 887 90.667000 1 665 1 chr7D.!!$R1 664
23 TraesCS3A01G113000 chr7D 54987584 54988253 669 False 876.000000 876 90.504000 1 663 1 chr7D.!!$F3 662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
654 665 0.109781 ATGCGCGCACACTTTTTAGG 60.11 50.0 39.05 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2558 8994 0.030235 CCCGCGTCATATCGTCTTGA 59.97 55.0 4.92 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
197 201 0.882927 CGGGCGAGTGGAGAAACAAA 60.883 55.000 0.00 0.00 0.00 2.83
200 204 1.880027 GGCGAGTGGAGAAACAAACAT 59.120 47.619 0.00 0.00 0.00 2.71
236 241 2.799371 GCGCGTAGGAGCAGTACT 59.201 61.111 8.43 0.00 38.98 2.73
356 363 1.925959 AGGGGGAAAGAGAAGGAATGG 59.074 52.381 0.00 0.00 0.00 3.16
359 366 1.686428 GGGAAAGAGAAGGAATGGGCC 60.686 57.143 0.00 0.00 0.00 5.80
364 371 2.897350 GAAGGAATGGGCCGCGAG 60.897 66.667 8.23 0.00 0.00 5.03
379 387 3.391382 GAGAGGTGGGGGTGGACG 61.391 72.222 0.00 0.00 0.00 4.79
391 399 1.747745 GTGGACGGGGTAATGGCAC 60.748 63.158 0.00 0.00 0.00 5.01
454 465 4.517285 GAACTGCCTAATCCTCAATGACA 58.483 43.478 0.00 0.00 0.00 3.58
467 478 0.391130 AATGACATGTGGGTCCGACG 60.391 55.000 1.15 0.00 36.97 5.12
471 482 3.075005 ATGTGGGTCCGACGGGAG 61.075 66.667 15.25 0.00 44.97 4.30
512 523 4.143333 AATCGGACCAGGCGACCG 62.143 66.667 12.45 12.45 46.71 4.79
576 587 2.258726 GGACACCTGGAAACCACGC 61.259 63.158 0.00 0.00 0.00 5.34
578 589 4.025401 CACCTGGAAACCACGCGC 62.025 66.667 5.73 0.00 0.00 6.86
604 615 2.278661 GGGACGAGATCGAACGGC 60.279 66.667 9.58 10.21 43.02 5.68
605 616 2.772691 GGGACGAGATCGAACGGCT 61.773 63.158 9.58 0.00 43.02 5.52
607 618 1.298488 GACGAGATCGAACGGCTCC 60.298 63.158 9.58 0.00 43.02 4.70
608 619 2.026301 CGAGATCGAACGGCTCCC 59.974 66.667 0.00 0.00 43.02 4.30
621 632 4.831307 CTCCCGTTCGACCGCTCG 62.831 72.222 0.00 0.00 41.65 5.03
623 634 4.712425 CCCGTTCGACCGCTCGTT 62.712 66.667 0.00 0.00 41.02 3.85
625 636 2.126965 CGTTCGACCGCTCGTTCT 60.127 61.111 0.00 0.00 41.02 3.01
626 637 2.144680 CGTTCGACCGCTCGTTCTC 61.145 63.158 0.00 0.00 41.02 2.87
627 638 1.209640 GTTCGACCGCTCGTTCTCT 59.790 57.895 0.00 0.00 41.02 3.10
628 639 0.793853 GTTCGACCGCTCGTTCTCTC 60.794 60.000 0.00 0.00 41.02 3.20
630 641 2.687805 CGACCGCTCGTTCTCTCCA 61.688 63.158 0.00 0.00 35.00 3.86
631 642 1.810532 GACCGCTCGTTCTCTCCAT 59.189 57.895 0.00 0.00 0.00 3.41
632 643 0.173708 GACCGCTCGTTCTCTCCATT 59.826 55.000 0.00 0.00 0.00 3.16
633 644 0.608640 ACCGCTCGTTCTCTCCATTT 59.391 50.000 0.00 0.00 0.00 2.32
634 645 1.822990 ACCGCTCGTTCTCTCCATTTA 59.177 47.619 0.00 0.00 0.00 1.40
635 646 2.232941 ACCGCTCGTTCTCTCCATTTAA 59.767 45.455 0.00 0.00 0.00 1.52
637 648 3.246226 CCGCTCGTTCTCTCCATTTAATG 59.754 47.826 0.00 0.00 0.00 1.90
641 652 2.597505 CGTTCTCTCCATTTAATGCGCG 60.598 50.000 0.00 0.00 0.00 6.86
643 654 0.657312 CTCTCCATTTAATGCGCGCA 59.343 50.000 38.27 38.27 0.00 6.09
646 657 0.179176 TCCATTTAATGCGCGCACAC 60.179 50.000 39.05 4.91 0.00 3.82
647 658 0.179166 CCATTTAATGCGCGCACACT 60.179 50.000 39.05 25.43 0.00 3.55
649 660 1.984990 CATTTAATGCGCGCACACTTT 59.015 42.857 39.05 28.18 0.00 2.66
650 661 2.126914 TTTAATGCGCGCACACTTTT 57.873 40.000 39.05 27.78 0.00 2.27
651 662 2.126914 TTAATGCGCGCACACTTTTT 57.873 40.000 39.05 27.01 0.00 1.94
652 663 2.971430 TAATGCGCGCACACTTTTTA 57.029 40.000 39.05 25.86 0.00 1.52
653 664 1.685302 AATGCGCGCACACTTTTTAG 58.315 45.000 39.05 0.00 0.00 1.85
654 665 0.109781 ATGCGCGCACACTTTTTAGG 60.110 50.000 39.05 0.00 0.00 2.69
656 667 0.317519 GCGCGCACACTTTTTAGGTT 60.318 50.000 29.10 0.00 0.00 3.50
657 668 1.862411 GCGCGCACACTTTTTAGGTTT 60.862 47.619 29.10 0.00 0.00 3.27
658 669 2.456010 CGCGCACACTTTTTAGGTTTT 58.544 42.857 8.75 0.00 0.00 2.43
659 670 3.619729 CGCGCACACTTTTTAGGTTTTA 58.380 40.909 8.75 0.00 0.00 1.52
665 676 6.921307 CGCACACTTTTTAGGTTTTAGGAAAT 59.079 34.615 0.00 0.00 0.00 2.17
695 706 4.775236 ACCTCTCGGTAAGTATCGTAGTT 58.225 43.478 0.00 0.00 43.29 2.24
697 708 4.024218 CCTCTCGGTAAGTATCGTAGTTGG 60.024 50.000 0.00 0.00 0.00 3.77
698 709 4.769688 TCTCGGTAAGTATCGTAGTTGGA 58.230 43.478 0.00 0.00 0.00 3.53
701 712 6.150976 TCTCGGTAAGTATCGTAGTTGGAAAA 59.849 38.462 0.00 0.00 0.00 2.29
702 713 6.686630 TCGGTAAGTATCGTAGTTGGAAAAA 58.313 36.000 0.00 0.00 0.00 1.94
728 740 2.433145 TCTCTTGCTTGCCGCTCG 60.433 61.111 0.00 0.00 40.11 5.03
733 745 3.529341 TTGCTTGCCGCTCGGAAGA 62.529 57.895 13.11 0.00 40.11 2.87
778 3557 2.757099 GTCATGCCTGCCCCCAAG 60.757 66.667 0.00 0.00 0.00 3.61
785 3564 1.998530 CCTGCCCCCAAGTGACATA 59.001 57.895 0.00 0.00 0.00 2.29
826 3605 5.418676 GCTCTAGAACTTTCTTCATCAGCT 58.581 41.667 0.00 0.00 38.70 4.24
834 3613 1.186200 TCTTCATCAGCTGCGGTAGT 58.814 50.000 9.47 0.00 0.00 2.73
835 3614 2.375146 TCTTCATCAGCTGCGGTAGTA 58.625 47.619 9.47 0.00 0.00 1.82
836 3615 2.099263 TCTTCATCAGCTGCGGTAGTAC 59.901 50.000 9.47 0.00 0.00 2.73
902 3690 0.176680 CATCACCTTCCAGACTCCCG 59.823 60.000 0.00 0.00 0.00 5.14
969 3764 3.054802 ACAACCAAAGCATCCCACAAAAA 60.055 39.130 0.00 0.00 0.00 1.94
1013 3839 4.449131 GAGGAGATCAATCACAATCAGCA 58.551 43.478 0.00 0.00 0.00 4.41
1207 4042 3.282745 GACGTGAAGGAGCTGCCGA 62.283 63.158 0.00 0.00 43.43 5.54
1270 4105 0.320683 CGACATCAAGGTGCAGGTGA 60.321 55.000 0.00 0.00 0.00 4.02
1413 4249 1.601663 GCCGACATGGAGAAGATCTCG 60.602 57.143 0.00 0.00 44.28 4.04
1585 7967 0.038251 TGTGACGAGTGATGGAGTGC 60.038 55.000 0.00 0.00 0.00 4.40
1656 8069 5.639931 TGATGGTTCGATGTTTCGTTAATGA 59.360 36.000 0.00 0.00 45.65 2.57
1658 8071 5.681880 TGGTTCGATGTTTCGTTAATGAAC 58.318 37.500 9.67 6.38 45.65 3.18
1668 8081 2.948979 TCGTTAATGAACATGGGGATGC 59.051 45.455 0.00 0.00 35.06 3.91
1695 8108 2.860136 GGCTTCGCCTGAATAAAAATGC 59.140 45.455 0.00 0.00 46.69 3.56
1754 8176 8.221766 CCAAGATGTTCGTTTAAGTTCTAAGAC 58.778 37.037 0.00 0.00 0.00 3.01
1850 8278 5.068591 AGCAAAATTAGGTGGAAAACGAACT 59.931 36.000 0.00 0.00 0.00 3.01
1851 8279 6.263617 AGCAAAATTAGGTGGAAAACGAACTA 59.736 34.615 0.00 0.00 0.00 2.24
1916 8346 4.524316 TGTCTTGGCATTTTCATCTTGG 57.476 40.909 0.00 0.00 0.00 3.61
1931 8361 1.614903 TCTTGGCAAATGTCTGGCTTG 59.385 47.619 0.00 0.00 42.21 4.01
2003 8439 4.082081 TGTTAATTCTGCTTTGCCTGATGG 60.082 41.667 0.00 0.00 0.00 3.51
2034 8470 7.025963 GTGAGAATCTCTTGGCTACATTTTTG 58.974 38.462 11.92 0.00 34.92 2.44
2035 8471 6.716628 TGAGAATCTCTTGGCTACATTTTTGT 59.283 34.615 11.92 0.00 34.92 2.83
2038 8474 8.515414 AGAATCTCTTGGCTACATTTTTGTTAC 58.485 33.333 0.00 0.00 0.00 2.50
2039 8475 7.759489 ATCTCTTGGCTACATTTTTGTTACA 57.241 32.000 0.00 0.00 0.00 2.41
2040 8476 7.759489 TCTCTTGGCTACATTTTTGTTACAT 57.241 32.000 0.00 0.00 0.00 2.29
2041 8477 8.177119 TCTCTTGGCTACATTTTTGTTACATT 57.823 30.769 0.00 0.00 0.00 2.71
2042 8478 9.290988 TCTCTTGGCTACATTTTTGTTACATTA 57.709 29.630 0.00 0.00 0.00 1.90
2044 8480 9.073475 TCTTGGCTACATTTTTGTTACATTACT 57.927 29.630 0.00 0.00 0.00 2.24
2045 8481 9.341899 CTTGGCTACATTTTTGTTACATTACTC 57.658 33.333 0.00 0.00 0.00 2.59
2046 8482 8.630054 TGGCTACATTTTTGTTACATTACTCT 57.370 30.769 0.00 0.00 0.00 3.24
2060 8496 9.908152 GTTACATTACTCTTTGGCTACATTTTT 57.092 29.630 0.00 0.00 0.00 1.94
2061 8497 9.906660 TTACATTACTCTTTGGCTACATTTTTG 57.093 29.630 0.00 0.00 0.00 2.44
2062 8498 7.951591 ACATTACTCTTTGGCTACATTTTTGT 58.048 30.769 0.00 0.00 0.00 2.83
2067 8503 8.177119 ACTCTTTGGCTACATTTTTGTTATCA 57.823 30.769 0.00 0.00 0.00 2.15
2068 8504 8.299570 ACTCTTTGGCTACATTTTTGTTATCAG 58.700 33.333 0.00 0.00 0.00 2.90
2069 8505 8.402798 TCTTTGGCTACATTTTTGTTATCAGA 57.597 30.769 0.00 0.00 0.00 3.27
2070 8506 9.023962 TCTTTGGCTACATTTTTGTTATCAGAT 57.976 29.630 0.00 0.00 0.00 2.90
2071 8507 9.643693 CTTTGGCTACATTTTTGTTATCAGATT 57.356 29.630 0.00 0.00 0.00 2.40
2074 8510 9.679661 TGGCTACATTTTTGTTATCAGATTAGA 57.320 29.630 0.00 0.00 0.00 2.10
2118 8554 4.717188 GCTACAGAAAATAGCGTCATCC 57.283 45.455 0.00 0.00 36.02 3.51
2119 8555 4.372656 GCTACAGAAAATAGCGTCATCCT 58.627 43.478 0.00 0.00 36.02 3.24
2120 8556 4.811557 GCTACAGAAAATAGCGTCATCCTT 59.188 41.667 0.00 0.00 36.02 3.36
2121 8557 5.277058 GCTACAGAAAATAGCGTCATCCTTG 60.277 44.000 0.00 0.00 36.02 3.61
2122 8558 4.832248 ACAGAAAATAGCGTCATCCTTGA 58.168 39.130 0.00 0.00 0.00 3.02
2123 8559 5.245531 ACAGAAAATAGCGTCATCCTTGAA 58.754 37.500 0.00 0.00 32.48 2.69
2124 8560 5.705441 ACAGAAAATAGCGTCATCCTTGAAA 59.295 36.000 0.00 0.00 32.48 2.69
2125 8561 6.206634 ACAGAAAATAGCGTCATCCTTGAAAA 59.793 34.615 0.00 0.00 32.48 2.29
2126 8562 7.094205 ACAGAAAATAGCGTCATCCTTGAAAAT 60.094 33.333 0.00 0.00 32.48 1.82
2127 8563 8.397906 CAGAAAATAGCGTCATCCTTGAAAATA 58.602 33.333 0.00 0.00 32.48 1.40
2128 8564 9.125026 AGAAAATAGCGTCATCCTTGAAAATAT 57.875 29.630 0.00 0.00 32.48 1.28
2129 8565 9.173939 GAAAATAGCGTCATCCTTGAAAATATG 57.826 33.333 0.00 0.00 32.48 1.78
2130 8566 4.558538 AGCGTCATCCTTGAAAATATGC 57.441 40.909 0.00 0.00 32.48 3.14
2131 8567 4.202441 AGCGTCATCCTTGAAAATATGCT 58.798 39.130 0.00 0.00 32.48 3.79
2132 8568 5.368145 AGCGTCATCCTTGAAAATATGCTA 58.632 37.500 0.00 0.00 32.48 3.49
2133 8569 6.000219 AGCGTCATCCTTGAAAATATGCTAT 59.000 36.000 0.00 0.00 32.48 2.97
2134 8570 6.488006 AGCGTCATCCTTGAAAATATGCTATT 59.512 34.615 0.00 0.00 32.48 1.73
2135 8571 7.661437 AGCGTCATCCTTGAAAATATGCTATTA 59.339 33.333 0.00 0.00 32.48 0.98
2136 8572 7.959651 GCGTCATCCTTGAAAATATGCTATTAG 59.040 37.037 0.00 0.00 32.48 1.73
2137 8573 7.959651 CGTCATCCTTGAAAATATGCTATTAGC 59.040 37.037 8.80 8.80 36.13 3.09
2138 8574 7.959651 GTCATCCTTGAAAATATGCTATTAGCG 59.040 37.037 10.94 0.00 37.59 4.26
2139 8575 7.661437 TCATCCTTGAAAATATGCTATTAGCGT 59.339 33.333 14.53 14.53 46.26 5.07
2140 8576 7.189693 TCCTTGAAAATATGCTATTAGCGTG 57.810 36.000 18.61 1.55 46.26 5.34
2141 8577 6.765989 TCCTTGAAAATATGCTATTAGCGTGT 59.234 34.615 18.61 10.54 46.26 4.49
2142 8578 7.282224 TCCTTGAAAATATGCTATTAGCGTGTT 59.718 33.333 18.61 15.48 46.26 3.32
2143 8579 8.556194 CCTTGAAAATATGCTATTAGCGTGTTA 58.444 33.333 18.61 1.44 46.26 2.41
2159 8595 4.936396 GTGTTATAACGCGCTATAACGT 57.064 40.909 31.45 6.42 43.33 3.99
2160 8596 4.670952 GTGTTATAACGCGCTATAACGTG 58.329 43.478 31.45 7.51 43.33 4.49
2167 8603 3.865428 CGCGCTATAACGTGCTATTAG 57.135 47.619 5.56 0.00 38.23 1.73
2168 8604 2.026507 CGCGCTATAACGTGCTATTAGC 59.973 50.000 5.56 8.80 42.82 3.09
2185 8621 8.044060 GCTATTAGCAAGGCATTGTATATTGA 57.956 34.615 13.30 0.00 41.89 2.57
2186 8622 8.680903 GCTATTAGCAAGGCATTGTATATTGAT 58.319 33.333 13.30 0.84 41.89 2.57
2208 8644 8.948631 TGATTTATTTAGCGAGACAATTCTCT 57.051 30.769 0.46 0.00 45.61 3.10
2214 8650 7.875316 TTTAGCGAGACAATTCTCTATATGC 57.125 36.000 0.46 0.00 45.61 3.14
2215 8651 5.720371 AGCGAGACAATTCTCTATATGCT 57.280 39.130 0.46 0.00 45.61 3.79
2216 8652 6.825944 AGCGAGACAATTCTCTATATGCTA 57.174 37.500 0.46 0.00 45.61 3.49
2217 8653 7.403312 AGCGAGACAATTCTCTATATGCTAT 57.597 36.000 0.46 0.00 45.61 2.97
2218 8654 8.512966 AGCGAGACAATTCTCTATATGCTATA 57.487 34.615 0.46 0.00 45.61 1.31
2219 8655 8.620416 AGCGAGACAATTCTCTATATGCTATAG 58.380 37.037 0.00 0.00 45.61 1.31
2220 8656 7.378461 GCGAGACAATTCTCTATATGCTATAGC 59.622 40.741 18.18 18.18 45.61 2.97
2221 8657 7.585936 CGAGACAATTCTCTATATGCTATAGCG 59.414 40.741 19.55 5.29 45.61 4.26
2222 8658 8.287439 AGACAATTCTCTATATGCTATAGCGT 57.713 34.615 22.53 22.53 45.83 5.07
2223 8659 8.187480 AGACAATTCTCTATATGCTATAGCGTG 58.813 37.037 26.43 12.19 45.83 5.34
2224 8660 7.831753 ACAATTCTCTATATGCTATAGCGTGT 58.168 34.615 26.43 22.47 45.83 4.49
2225 8661 8.307483 ACAATTCTCTATATGCTATAGCGTGTT 58.693 33.333 26.43 16.80 45.83 3.32
2226 8662 9.788960 CAATTCTCTATATGCTATAGCGTGTTA 57.211 33.333 26.43 16.99 45.83 2.41
2233 8669 9.452065 CTATATGCTATAGCGTGTTATTAGTGG 57.548 37.037 26.43 4.92 45.83 4.00
2234 8670 4.304110 TGCTATAGCGTGTTATTAGTGGC 58.696 43.478 19.55 0.00 45.83 5.01
2235 8671 4.202172 TGCTATAGCGTGTTATTAGTGGCA 60.202 41.667 19.55 0.00 45.83 4.92
2236 8672 4.748102 GCTATAGCGTGTTATTAGTGGCAA 59.252 41.667 9.40 0.00 0.00 4.52
2237 8673 5.408604 GCTATAGCGTGTTATTAGTGGCAAT 59.591 40.000 9.40 0.00 0.00 3.56
2238 8674 6.588756 GCTATAGCGTGTTATTAGTGGCAATA 59.411 38.462 9.40 0.00 0.00 1.90
2239 8675 7.277981 GCTATAGCGTGTTATTAGTGGCAATAT 59.722 37.037 9.40 0.00 0.00 1.28
2240 8676 9.797556 CTATAGCGTGTTATTAGTGGCAATATA 57.202 33.333 0.00 0.00 0.00 0.86
2241 8677 8.703604 ATAGCGTGTTATTAGTGGCAATATAG 57.296 34.615 0.00 0.00 0.00 1.31
2242 8678 5.408604 AGCGTGTTATTAGTGGCAATATAGC 59.591 40.000 0.00 0.00 0.00 2.97
2243 8679 5.667888 GCGTGTTATTAGTGGCAATATAGCG 60.668 44.000 0.00 0.00 34.64 4.26
2244 8680 5.618561 GTGTTATTAGTGGCAATATAGCGC 58.381 41.667 0.00 0.00 34.64 5.92
2245 8681 4.387559 TGTTATTAGTGGCAATATAGCGCG 59.612 41.667 0.00 0.00 34.64 6.86
2246 8682 1.144969 TTAGTGGCAATATAGCGCGC 58.855 50.000 26.66 26.66 34.64 6.86
2247 8683 0.317160 TAGTGGCAATATAGCGCGCT 59.683 50.000 38.01 38.01 34.64 5.92
2248 8684 0.317160 AGTGGCAATATAGCGCGCTA 59.683 50.000 39.72 39.72 34.64 4.26
2249 8685 1.066858 AGTGGCAATATAGCGCGCTAT 60.067 47.619 44.16 44.16 41.58 2.97
2250 8686 1.732259 GTGGCAATATAGCGCGCTATT 59.268 47.619 46.76 34.20 39.65 1.73
2251 8687 2.159627 GTGGCAATATAGCGCGCTATTT 59.840 45.455 46.76 38.48 39.65 1.40
2252 8688 2.811431 TGGCAATATAGCGCGCTATTTT 59.189 40.909 46.76 40.80 39.65 1.82
2253 8689 3.252215 TGGCAATATAGCGCGCTATTTTT 59.748 39.130 46.76 36.74 39.65 1.94
2288 8724 9.659830 AAATACTCAAAACAACTATTGTCGAAC 57.340 29.630 0.00 0.00 44.59 3.95
2289 8725 6.056428 ACTCAAAACAACTATTGTCGAACC 57.944 37.500 0.00 0.00 44.59 3.62
2290 8726 5.820947 ACTCAAAACAACTATTGTCGAACCT 59.179 36.000 0.00 0.00 44.59 3.50
2291 8727 6.018180 ACTCAAAACAACTATTGTCGAACCTC 60.018 38.462 0.00 0.00 44.59 3.85
2292 8728 6.053005 TCAAAACAACTATTGTCGAACCTCT 58.947 36.000 0.00 0.00 44.59 3.69
2293 8729 6.540914 TCAAAACAACTATTGTCGAACCTCTT 59.459 34.615 0.00 0.00 44.59 2.85
2294 8730 6.937436 AAACAACTATTGTCGAACCTCTTT 57.063 33.333 0.00 0.00 44.59 2.52
2295 8731 8.339714 CAAAACAACTATTGTCGAACCTCTTTA 58.660 33.333 0.00 0.00 44.59 1.85
2296 8732 8.617290 AAACAACTATTGTCGAACCTCTTTAT 57.383 30.769 0.00 0.00 44.59 1.40
2297 8733 9.715121 AAACAACTATTGTCGAACCTCTTTATA 57.285 29.630 0.00 0.00 44.59 0.98
2298 8734 9.886132 AACAACTATTGTCGAACCTCTTTATAT 57.114 29.630 0.00 0.00 44.59 0.86
2299 8735 9.530633 ACAACTATTGTCGAACCTCTTTATATC 57.469 33.333 0.00 0.00 40.56 1.63
2300 8736 8.691727 CAACTATTGTCGAACCTCTTTATATCG 58.308 37.037 0.00 0.00 34.98 2.92
2301 8737 8.162878 ACTATTGTCGAACCTCTTTATATCGA 57.837 34.615 0.00 0.00 39.91 3.59
2308 8744 8.162878 TCGAACCTCTTTATATCGACATAACT 57.837 34.615 0.00 0.00 37.59 2.24
2309 8745 8.627403 TCGAACCTCTTTATATCGACATAACTT 58.373 33.333 0.00 0.00 37.59 2.66
2310 8746 9.245962 CGAACCTCTTTATATCGACATAACTTT 57.754 33.333 0.00 0.00 35.65 2.66
2336 8772 6.567687 TTTTTGCGAGGAATATTGACAGAA 57.432 33.333 0.00 0.00 0.00 3.02
2337 8773 5.545658 TTTGCGAGGAATATTGACAGAAC 57.454 39.130 0.00 0.00 0.00 3.01
2338 8774 4.471904 TGCGAGGAATATTGACAGAACT 57.528 40.909 0.00 0.00 0.00 3.01
2339 8775 4.832248 TGCGAGGAATATTGACAGAACTT 58.168 39.130 0.00 0.00 0.00 2.66
2340 8776 4.631377 TGCGAGGAATATTGACAGAACTTG 59.369 41.667 0.00 0.00 0.00 3.16
2341 8777 4.631813 GCGAGGAATATTGACAGAACTTGT 59.368 41.667 0.00 0.00 44.55 3.16
2342 8778 5.810587 GCGAGGAATATTGACAGAACTTGTA 59.189 40.000 0.00 0.00 41.05 2.41
2343 8779 6.312918 GCGAGGAATATTGACAGAACTTGTAA 59.687 38.462 0.00 0.00 41.05 2.41
2344 8780 7.148474 GCGAGGAATATTGACAGAACTTGTAAA 60.148 37.037 0.00 0.00 41.05 2.01
2345 8781 8.883731 CGAGGAATATTGACAGAACTTGTAAAT 58.116 33.333 0.00 0.00 42.45 1.40
2346 8782 9.994432 GAGGAATATTGACAGAACTTGTAAATG 57.006 33.333 0.00 0.00 40.45 2.32
2347 8783 8.462016 AGGAATATTGACAGAACTTGTAAATGC 58.538 33.333 0.00 0.00 40.45 3.56
2348 8784 7.702348 GGAATATTGACAGAACTTGTAAATGCC 59.298 37.037 0.00 0.00 40.45 4.40
2349 8785 7.701539 ATATTGACAGAACTTGTAAATGCCA 57.298 32.000 1.06 0.00 40.45 4.92
2350 8786 6.594788 ATTGACAGAACTTGTAAATGCCAT 57.405 33.333 0.00 0.00 39.07 4.40
2351 8787 5.375417 TGACAGAACTTGTAAATGCCATG 57.625 39.130 0.00 0.00 41.05 3.66
2352 8788 4.168760 GACAGAACTTGTAAATGCCATGC 58.831 43.478 0.00 0.00 41.05 4.06
2353 8789 3.828451 ACAGAACTTGTAAATGCCATGCT 59.172 39.130 0.00 0.00 38.56 3.79
2354 8790 5.009631 ACAGAACTTGTAAATGCCATGCTA 58.990 37.500 0.00 0.00 38.56 3.49
2355 8791 5.106157 ACAGAACTTGTAAATGCCATGCTAC 60.106 40.000 0.00 0.00 38.56 3.58
2356 8792 5.124457 CAGAACTTGTAAATGCCATGCTACT 59.876 40.000 0.00 0.00 0.00 2.57
2357 8793 5.355350 AGAACTTGTAAATGCCATGCTACTC 59.645 40.000 0.00 0.00 0.00 2.59
2358 8794 3.947834 ACTTGTAAATGCCATGCTACTCC 59.052 43.478 0.00 0.00 0.00 3.85
2359 8795 2.930950 TGTAAATGCCATGCTACTCCC 58.069 47.619 0.00 0.00 0.00 4.30
2360 8796 1.873591 GTAAATGCCATGCTACTCCCG 59.126 52.381 0.00 0.00 0.00 5.14
2361 8797 0.466189 AAATGCCATGCTACTCCCGG 60.466 55.000 0.00 0.00 0.00 5.73
2362 8798 1.344953 AATGCCATGCTACTCCCGGA 61.345 55.000 0.73 0.00 0.00 5.14
2363 8799 1.130054 ATGCCATGCTACTCCCGGAT 61.130 55.000 0.73 0.00 0.00 4.18
2364 8800 1.302033 GCCATGCTACTCCCGGATG 60.302 63.158 0.73 0.00 0.00 3.51
2365 8801 2.044806 GCCATGCTACTCCCGGATGT 62.045 60.000 0.73 3.38 0.00 3.06
2366 8802 1.338107 CCATGCTACTCCCGGATGTA 58.662 55.000 0.73 4.56 0.00 2.29
2367 8803 1.273606 CCATGCTACTCCCGGATGTAG 59.726 57.143 21.67 21.67 39.15 2.74
2368 8804 1.273606 CATGCTACTCCCGGATGTAGG 59.726 57.143 24.81 12.06 37.28 3.18
2369 8805 0.260816 TGCTACTCCCGGATGTAGGT 59.739 55.000 24.81 9.75 37.28 3.08
2370 8806 1.496001 TGCTACTCCCGGATGTAGGTA 59.504 52.381 24.81 10.23 37.28 3.08
2371 8807 1.885233 GCTACTCCCGGATGTAGGTAC 59.115 57.143 24.81 12.06 37.28 3.34
2372 8808 2.750807 GCTACTCCCGGATGTAGGTACA 60.751 54.545 24.81 0.00 40.98 2.90
2386 8822 3.806949 AGGTACATCCTGCCAAGAAAA 57.193 42.857 0.00 0.00 46.19 2.29
2387 8823 4.112634 AGGTACATCCTGCCAAGAAAAA 57.887 40.909 0.00 0.00 46.19 1.94
2388 8824 4.677182 AGGTACATCCTGCCAAGAAAAAT 58.323 39.130 0.00 0.00 46.19 1.82
2389 8825 4.463891 AGGTACATCCTGCCAAGAAAAATG 59.536 41.667 0.00 0.00 46.19 2.32
2390 8826 4.462483 GGTACATCCTGCCAAGAAAAATGA 59.538 41.667 0.00 0.00 0.00 2.57
2391 8827 4.525912 ACATCCTGCCAAGAAAAATGAC 57.474 40.909 0.00 0.00 0.00 3.06
2392 8828 3.896888 ACATCCTGCCAAGAAAAATGACA 59.103 39.130 0.00 0.00 0.00 3.58
2393 8829 4.344679 ACATCCTGCCAAGAAAAATGACAA 59.655 37.500 0.00 0.00 0.00 3.18
2394 8830 5.163322 ACATCCTGCCAAGAAAAATGACAAA 60.163 36.000 0.00 0.00 0.00 2.83
2395 8831 5.350504 TCCTGCCAAGAAAAATGACAAAA 57.649 34.783 0.00 0.00 0.00 2.44
2396 8832 5.738909 TCCTGCCAAGAAAAATGACAAAAA 58.261 33.333 0.00 0.00 0.00 1.94
2423 8859 9.978044 ACGTGAATAATAACTTATACTCCCTTC 57.022 33.333 0.00 0.00 0.00 3.46
2424 8860 9.125906 CGTGAATAATAACTTATACTCCCTTCG 57.874 37.037 0.00 0.00 0.00 3.79
2425 8861 9.978044 GTGAATAATAACTTATACTCCCTTCGT 57.022 33.333 0.00 0.00 0.00 3.85
2431 8867 9.729281 AATAACTTATACTCCCTTCGTCAAAAA 57.271 29.630 0.00 0.00 0.00 1.94
2455 8891 7.707774 AAATTTGTCCTTTAAATGAACGTGG 57.292 32.000 0.00 0.00 0.00 4.94
2456 8892 5.838531 TTTGTCCTTTAAATGAACGTGGT 57.161 34.783 0.00 0.00 0.00 4.16
2457 8893 4.822036 TGTCCTTTAAATGAACGTGGTG 57.178 40.909 0.00 0.00 0.00 4.17
2458 8894 3.003897 TGTCCTTTAAATGAACGTGGTGC 59.996 43.478 0.00 0.00 0.00 5.01
2459 8895 3.252458 GTCCTTTAAATGAACGTGGTGCT 59.748 43.478 0.00 0.00 0.00 4.40
2460 8896 4.453136 GTCCTTTAAATGAACGTGGTGCTA 59.547 41.667 0.00 0.00 0.00 3.49
2461 8897 4.453136 TCCTTTAAATGAACGTGGTGCTAC 59.547 41.667 0.00 0.00 0.00 3.58
2462 8898 4.214545 CCTTTAAATGAACGTGGTGCTACA 59.785 41.667 0.00 0.00 0.00 2.74
2463 8899 5.106317 CCTTTAAATGAACGTGGTGCTACAT 60.106 40.000 0.00 0.00 0.00 2.29
2464 8900 6.092944 CCTTTAAATGAACGTGGTGCTACATA 59.907 38.462 0.00 0.00 0.00 2.29
2465 8901 4.939509 AAATGAACGTGGTGCTACATAC 57.060 40.909 0.00 0.00 0.00 2.39
2466 8902 1.985334 TGAACGTGGTGCTACATACG 58.015 50.000 0.00 0.00 41.86 3.06
2467 8903 1.540707 TGAACGTGGTGCTACATACGA 59.459 47.619 16.04 0.00 39.61 3.43
2468 8904 1.916000 GAACGTGGTGCTACATACGAC 59.084 52.381 16.04 0.92 39.61 4.34
2469 8905 2.562489 CGTGGTGCTACATACGACG 58.438 57.895 0.00 0.00 42.15 5.12
2471 8907 2.267188 GTGGTGCTACATACGACGAA 57.733 50.000 0.00 0.00 0.00 3.85
2472 8908 2.182825 GTGGTGCTACATACGACGAAG 58.817 52.381 0.00 0.00 0.00 3.79
2473 8909 1.133598 TGGTGCTACATACGACGAAGG 59.866 52.381 0.00 0.00 0.00 3.46
2474 8910 1.535437 GGTGCTACATACGACGAAGGG 60.535 57.143 0.00 0.00 0.00 3.95
2475 8911 1.402968 GTGCTACATACGACGAAGGGA 59.597 52.381 0.00 0.00 0.00 4.20
2476 8912 1.674441 TGCTACATACGACGAAGGGAG 59.326 52.381 0.00 0.00 0.00 4.30
2477 8913 1.674962 GCTACATACGACGAAGGGAGT 59.325 52.381 0.00 0.00 0.00 3.85
2478 8914 2.874701 GCTACATACGACGAAGGGAGTA 59.125 50.000 0.00 0.00 0.00 2.59
2479 8915 3.501445 GCTACATACGACGAAGGGAGTAT 59.499 47.826 0.00 0.00 0.00 2.12
2480 8916 3.984508 ACATACGACGAAGGGAGTATG 57.015 47.619 0.00 11.47 46.90 2.39
2481 8917 3.984508 CATACGACGAAGGGAGTATGT 57.015 47.619 0.00 0.00 40.64 2.29
2482 8918 3.629058 CATACGACGAAGGGAGTATGTG 58.371 50.000 0.00 0.00 40.64 3.21
2483 8919 1.542492 ACGACGAAGGGAGTATGTGT 58.458 50.000 0.00 0.00 0.00 3.72
2484 8920 1.891150 ACGACGAAGGGAGTATGTGTT 59.109 47.619 0.00 0.00 0.00 3.32
2485 8921 2.259618 CGACGAAGGGAGTATGTGTTG 58.740 52.381 0.00 0.00 0.00 3.33
2486 8922 2.094906 CGACGAAGGGAGTATGTGTTGA 60.095 50.000 0.00 0.00 0.00 3.18
2487 8923 3.428999 CGACGAAGGGAGTATGTGTTGAT 60.429 47.826 0.00 0.00 0.00 2.57
2488 8924 4.504858 GACGAAGGGAGTATGTGTTGATT 58.495 43.478 0.00 0.00 0.00 2.57
2489 8925 4.906618 ACGAAGGGAGTATGTGTTGATTT 58.093 39.130 0.00 0.00 0.00 2.17
2490 8926 5.313712 ACGAAGGGAGTATGTGTTGATTTT 58.686 37.500 0.00 0.00 0.00 1.82
2491 8927 5.768164 ACGAAGGGAGTATGTGTTGATTTTT 59.232 36.000 0.00 0.00 0.00 1.94
2512 8948 5.578005 TTTTTCACCAACAATACCGTGAA 57.422 34.783 0.00 0.00 42.01 3.18
2514 8950 5.776173 TTTCACCAACAATACCGTGAAAT 57.224 34.783 9.48 0.00 45.45 2.17
2515 8951 5.776173 TTCACCAACAATACCGTGAAATT 57.224 34.783 0.00 0.00 41.08 1.82
2516 8952 5.114785 TCACCAACAATACCGTGAAATTG 57.885 39.130 0.00 0.00 38.71 2.32
2517 8953 4.822350 TCACCAACAATACCGTGAAATTGA 59.178 37.500 2.30 0.00 36.73 2.57
2518 8954 5.475220 TCACCAACAATACCGTGAAATTGAT 59.525 36.000 2.30 0.00 36.73 2.57
2519 8955 5.799936 CACCAACAATACCGTGAAATTGATC 59.200 40.000 2.30 0.00 36.73 2.92
2520 8956 5.105917 ACCAACAATACCGTGAAATTGATCC 60.106 40.000 2.30 0.00 36.73 3.36
2521 8957 4.875544 ACAATACCGTGAAATTGATCCG 57.124 40.909 2.30 0.00 36.73 4.18
2522 8958 4.258543 ACAATACCGTGAAATTGATCCGT 58.741 39.130 2.30 0.00 36.73 4.69
2523 8959 4.698304 ACAATACCGTGAAATTGATCCGTT 59.302 37.500 2.30 0.00 36.73 4.44
2524 8960 5.182380 ACAATACCGTGAAATTGATCCGTTT 59.818 36.000 2.30 0.00 36.73 3.60
2525 8961 6.372103 ACAATACCGTGAAATTGATCCGTTTA 59.628 34.615 2.30 0.00 36.73 2.01
2526 8962 4.673534 ACCGTGAAATTGATCCGTTTAC 57.326 40.909 0.00 0.00 0.00 2.01
2527 8963 4.320870 ACCGTGAAATTGATCCGTTTACT 58.679 39.130 0.00 0.00 0.00 2.24
2528 8964 5.481105 ACCGTGAAATTGATCCGTTTACTA 58.519 37.500 0.00 0.00 0.00 1.82
2529 8965 5.933463 ACCGTGAAATTGATCCGTTTACTAA 59.067 36.000 0.00 0.00 0.00 2.24
2530 8966 6.596497 ACCGTGAAATTGATCCGTTTACTAAT 59.404 34.615 0.00 0.00 0.00 1.73
2531 8967 7.765360 ACCGTGAAATTGATCCGTTTACTAATA 59.235 33.333 0.00 0.00 0.00 0.98
2532 8968 8.060090 CCGTGAAATTGATCCGTTTACTAATAC 58.940 37.037 0.00 0.00 0.00 1.89
2533 8969 8.597227 CGTGAAATTGATCCGTTTACTAATACA 58.403 33.333 0.00 0.00 0.00 2.29
2538 8974 9.661563 AATTGATCCGTTTACTAATACAACAGA 57.338 29.630 0.00 0.00 0.00 3.41
2539 8975 9.661563 ATTGATCCGTTTACTAATACAACAGAA 57.338 29.630 0.00 0.00 0.00 3.02
2540 8976 8.697846 TGATCCGTTTACTAATACAACAGAAG 57.302 34.615 0.00 0.00 0.00 2.85
2541 8977 7.762615 TGATCCGTTTACTAATACAACAGAAGG 59.237 37.037 0.00 0.00 0.00 3.46
2542 8978 6.996509 TCCGTTTACTAATACAACAGAAGGT 58.003 36.000 0.00 0.00 0.00 3.50
2543 8979 7.444299 TCCGTTTACTAATACAACAGAAGGTT 58.556 34.615 0.00 0.00 41.47 3.50
2555 8991 5.413309 AACAGAAGGTTGAGTAGATGAGG 57.587 43.478 0.00 0.00 38.60 3.86
2556 8992 3.196685 ACAGAAGGTTGAGTAGATGAGGC 59.803 47.826 0.00 0.00 0.00 4.70
2557 8993 3.196469 CAGAAGGTTGAGTAGATGAGGCA 59.804 47.826 0.00 0.00 0.00 4.75
2558 8994 4.036518 AGAAGGTTGAGTAGATGAGGCAT 58.963 43.478 0.00 0.00 0.00 4.40
2559 8995 4.100808 AGAAGGTTGAGTAGATGAGGCATC 59.899 45.833 0.00 0.00 40.80 3.91
2560 8996 3.378512 AGGTTGAGTAGATGAGGCATCA 58.621 45.455 2.36 2.36 42.72 3.07
2561 8997 3.776969 AGGTTGAGTAGATGAGGCATCAA 59.223 43.478 4.62 0.00 42.72 2.57
2562 8998 4.125703 GGTTGAGTAGATGAGGCATCAAG 58.874 47.826 4.62 0.00 42.72 3.02
2563 8999 4.141846 GGTTGAGTAGATGAGGCATCAAGA 60.142 45.833 4.62 0.00 42.72 3.02
2564 9000 4.662468 TGAGTAGATGAGGCATCAAGAC 57.338 45.455 4.62 3.80 42.72 3.01
2565 9001 3.067320 TGAGTAGATGAGGCATCAAGACG 59.933 47.826 4.62 0.00 42.72 4.18
2566 9002 3.291584 AGTAGATGAGGCATCAAGACGA 58.708 45.455 4.62 0.00 42.72 4.20
2567 9003 3.894427 AGTAGATGAGGCATCAAGACGAT 59.106 43.478 4.62 0.00 42.72 3.73
2568 9004 5.073428 AGTAGATGAGGCATCAAGACGATA 58.927 41.667 4.62 0.00 42.72 2.92
2569 9005 5.714333 AGTAGATGAGGCATCAAGACGATAT 59.286 40.000 4.62 0.00 42.72 1.63
2570 9006 4.818642 AGATGAGGCATCAAGACGATATG 58.181 43.478 4.62 0.00 42.72 1.78
2571 9007 4.525874 AGATGAGGCATCAAGACGATATGA 59.474 41.667 4.62 0.00 42.72 2.15
2572 9008 3.982475 TGAGGCATCAAGACGATATGAC 58.018 45.455 0.00 0.00 31.20 3.06
2573 9009 2.983136 GAGGCATCAAGACGATATGACG 59.017 50.000 0.00 0.00 33.68 4.35
2574 9010 1.457303 GGCATCAAGACGATATGACGC 59.543 52.381 0.00 0.00 34.25 5.19
2575 9011 1.123217 GCATCAAGACGATATGACGCG 59.877 52.381 3.53 3.53 36.70 6.01
2576 9012 1.716050 CATCAAGACGATATGACGCGG 59.284 52.381 12.47 0.00 36.70 6.46
2577 9013 0.030235 TCAAGACGATATGACGCGGG 59.970 55.000 12.47 0.00 36.70 6.13
2578 9014 1.299926 AAGACGATATGACGCGGGC 60.300 57.895 12.47 1.95 36.70 6.13
2579 9015 3.097728 GACGATATGACGCGGGCG 61.098 66.667 12.47 12.04 46.03 6.13
2580 9016 3.531920 GACGATATGACGCGGGCGA 62.532 63.158 20.98 0.00 42.83 5.54
2581 9017 3.097728 CGATATGACGCGGGCGAC 61.098 66.667 20.98 14.39 42.83 5.19
2627 9063 4.883354 GCCTCCATCGGCCTTGGG 62.883 72.222 18.59 9.07 44.41 4.12
2628 9064 3.411517 CCTCCATCGGCCTTGGGT 61.412 66.667 18.59 0.00 34.85 4.51
2629 9065 2.124570 CTCCATCGGCCTTGGGTG 60.125 66.667 18.59 10.16 34.85 4.61
2630 9066 2.933287 TCCATCGGCCTTGGGTGT 60.933 61.111 18.59 0.00 34.85 4.16
2631 9067 2.751436 CCATCGGCCTTGGGTGTG 60.751 66.667 12.66 0.00 0.00 3.82
2632 9068 2.751436 CATCGGCCTTGGGTGTGG 60.751 66.667 0.00 0.00 0.00 4.17
2633 9069 4.047125 ATCGGCCTTGGGTGTGGG 62.047 66.667 0.00 0.00 0.00 4.61
2638 9074 4.579384 CCTTGGGTGTGGGCACGT 62.579 66.667 0.00 0.00 46.13 4.49
2639 9075 2.978010 CTTGGGTGTGGGCACGTC 60.978 66.667 0.00 0.00 46.13 4.34
2640 9076 4.920112 TTGGGTGTGGGCACGTCG 62.920 66.667 0.00 0.00 46.13 5.12
2652 9088 4.590522 ACGTCGGCGGTCGGTTTT 62.591 61.111 16.39 5.68 43.45 2.43
2653 9089 4.067016 CGTCGGCGGTCGGTTTTG 62.067 66.667 7.21 0.00 39.77 2.44
2654 9090 3.719144 GTCGGCGGTCGGTTTTGG 61.719 66.667 7.21 0.00 39.77 3.28
2655 9091 4.992511 TCGGCGGTCGGTTTTGGG 62.993 66.667 7.21 0.00 39.77 4.12
2660 9096 2.358984 GGTCGGTTTTGGGCGCTA 60.359 61.111 7.64 0.00 0.00 4.26
2661 9097 2.396157 GGTCGGTTTTGGGCGCTAG 61.396 63.158 7.64 0.00 0.00 3.42
2662 9098 2.744709 TCGGTTTTGGGCGCTAGC 60.745 61.111 7.64 4.06 44.18 3.42
2663 9099 4.160635 CGGTTTTGGGCGCTAGCG 62.161 66.667 32.22 32.22 46.35 4.26
2664 9100 3.810896 GGTTTTGGGCGCTAGCGG 61.811 66.667 35.86 19.18 46.35 5.52
2665 9101 2.744709 GTTTTGGGCGCTAGCGGA 60.745 61.111 35.86 1.08 46.35 5.54
2666 9102 2.435938 TTTTGGGCGCTAGCGGAG 60.436 61.111 35.86 11.52 46.35 4.63
2667 9103 3.248446 TTTTGGGCGCTAGCGGAGT 62.248 57.895 35.86 0.00 46.35 3.85
2668 9104 3.659089 TTTGGGCGCTAGCGGAGTC 62.659 63.158 35.86 20.20 46.35 3.36
2670 9106 4.577246 GGGCGCTAGCGGAGTCAG 62.577 72.222 35.86 9.20 46.35 3.51
2671 9107 3.518998 GGCGCTAGCGGAGTCAGA 61.519 66.667 35.86 0.00 46.35 3.27
2672 9108 2.025441 GCGCTAGCGGAGTCAGAG 59.975 66.667 35.86 7.67 40.19 3.35
2673 9109 2.473760 GCGCTAGCGGAGTCAGAGA 61.474 63.158 35.86 0.00 40.19 3.10
2674 9110 1.994507 GCGCTAGCGGAGTCAGAGAA 61.995 60.000 35.86 0.00 40.19 2.87
2675 9111 0.665835 CGCTAGCGGAGTCAGAGAAT 59.334 55.000 29.29 0.00 35.56 2.40
2676 9112 1.599171 CGCTAGCGGAGTCAGAGAATG 60.599 57.143 29.29 0.00 35.56 2.67
2677 9113 1.678627 GCTAGCGGAGTCAGAGAATGA 59.321 52.381 0.00 0.00 34.79 2.57
2678 9114 2.287547 GCTAGCGGAGTCAGAGAATGAG 60.288 54.545 0.00 0.00 39.07 2.90
2679 9115 1.110442 AGCGGAGTCAGAGAATGAGG 58.890 55.000 0.00 0.00 39.07 3.86
2680 9116 1.107114 GCGGAGTCAGAGAATGAGGA 58.893 55.000 0.00 0.00 39.07 3.71
2681 9117 1.202359 GCGGAGTCAGAGAATGAGGAC 60.202 57.143 0.00 0.00 39.07 3.85
2682 9118 1.064803 CGGAGTCAGAGAATGAGGACG 59.935 57.143 0.00 0.00 39.07 4.79
2683 9119 2.370349 GGAGTCAGAGAATGAGGACGA 58.630 52.381 0.00 0.00 39.07 4.20
2684 9120 2.098443 GGAGTCAGAGAATGAGGACGAC 59.902 54.545 0.00 0.00 39.07 4.34
2685 9121 1.740585 AGTCAGAGAATGAGGACGACG 59.259 52.381 0.00 0.00 39.07 5.12
2686 9122 1.738350 GTCAGAGAATGAGGACGACGA 59.262 52.381 0.00 0.00 39.07 4.20
2687 9123 1.738350 TCAGAGAATGAGGACGACGAC 59.262 52.381 0.00 0.00 32.77 4.34
2688 9124 0.727970 AGAGAATGAGGACGACGACG 59.272 55.000 5.58 5.58 45.75 5.12
2689 9125 0.725686 GAGAATGAGGACGACGACGA 59.274 55.000 15.32 0.00 42.66 4.20
2690 9126 0.447011 AGAATGAGGACGACGACGAC 59.553 55.000 15.32 7.84 42.66 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 4.126437 CCTTTTGGAAAACTGCCGAATTT 58.874 39.130 0.00 0.00 44.07 1.82
197 201 1.189524 TCCCCGTTCTTCGTCCATGT 61.190 55.000 0.00 0.00 37.94 3.21
200 204 2.939261 GCTCCCCGTTCTTCGTCCA 61.939 63.158 0.00 0.00 37.94 4.02
321 328 1.082104 CCCTTGCTTTCGTCGTTGC 60.082 57.895 0.00 0.00 0.00 4.17
327 334 0.476771 TCTTTCCCCCTTGCTTTCGT 59.523 50.000 0.00 0.00 0.00 3.85
379 387 1.064952 CGAATTTCGTGCCATTACCCC 59.935 52.381 10.61 0.00 34.72 4.95
391 399 1.861715 GCGGCGGTTTCGAATTTCG 60.862 57.895 12.54 12.54 42.10 3.46
418 426 1.449601 AGTTCCGCAGCGTATTGGG 60.450 57.895 15.05 0.00 0.00 4.12
420 428 1.060937 GCAGTTCCGCAGCGTATTG 59.939 57.895 15.05 9.43 0.00 1.90
421 429 2.106683 GGCAGTTCCGCAGCGTATT 61.107 57.895 15.05 0.00 0.00 1.89
422 430 1.672854 TAGGCAGTTCCGCAGCGTAT 61.673 55.000 15.05 0.00 40.77 3.06
454 465 3.075005 CTCCCGTCGGACCCACAT 61.075 66.667 14.39 0.00 33.32 3.21
467 478 0.529992 CCACGCGAGATAAACCTCCC 60.530 60.000 15.93 0.00 0.00 4.30
559 570 2.604174 CGCGTGGTTTCCAGGTGTC 61.604 63.158 0.00 0.00 42.61 3.67
560 571 2.590575 CGCGTGGTTTCCAGGTGT 60.591 61.111 0.00 0.00 42.61 4.16
583 594 0.384477 CGTTCGATCTCGTCCCGATC 60.384 60.000 0.00 0.00 40.80 3.69
584 595 1.647629 CGTTCGATCTCGTCCCGAT 59.352 57.895 0.00 0.00 40.80 4.18
585 596 2.466982 CCGTTCGATCTCGTCCCGA 61.467 63.158 0.00 0.00 40.80 5.14
586 597 2.024305 CCGTTCGATCTCGTCCCG 59.976 66.667 0.00 1.31 40.80 5.14
588 599 1.298488 GAGCCGTTCGATCTCGTCC 60.298 63.158 0.00 0.00 40.80 4.79
592 603 2.026301 CGGGAGCCGTTCGATCTC 59.974 66.667 0.00 0.54 42.73 2.75
615 626 2.579207 TAAATGGAGAGAACGAGCGG 57.421 50.000 0.00 0.00 0.00 5.52
616 627 3.302740 GCATTAAATGGAGAGAACGAGCG 60.303 47.826 0.00 0.00 0.00 5.03
617 628 3.302740 CGCATTAAATGGAGAGAACGAGC 60.303 47.826 0.00 0.00 0.00 5.03
619 630 2.607635 GCGCATTAAATGGAGAGAACGA 59.392 45.455 0.30 0.00 0.00 3.85
621 632 2.851008 GCGCGCATTAAATGGAGAGAAC 60.851 50.000 29.10 0.00 0.00 3.01
622 633 1.330521 GCGCGCATTAAATGGAGAGAA 59.669 47.619 29.10 0.00 0.00 2.87
623 634 0.937304 GCGCGCATTAAATGGAGAGA 59.063 50.000 29.10 0.00 0.00 3.10
625 636 0.376852 GTGCGCGCATTAAATGGAGA 59.623 50.000 38.62 6.07 0.00 3.71
626 637 0.098552 TGTGCGCGCATTAAATGGAG 59.901 50.000 38.62 0.00 0.00 3.86
627 638 0.179176 GTGTGCGCGCATTAAATGGA 60.179 50.000 38.62 7.63 0.00 3.41
628 639 0.179166 AGTGTGCGCGCATTAAATGG 60.179 50.000 38.62 0.00 0.00 3.16
630 641 2.346099 AAAGTGTGCGCGCATTAAAT 57.654 40.000 38.62 21.90 0.00 1.40
631 642 2.126914 AAAAGTGTGCGCGCATTAAA 57.873 40.000 38.62 20.23 0.00 1.52
632 643 2.126914 AAAAAGTGTGCGCGCATTAA 57.873 40.000 38.62 22.94 0.00 1.40
633 644 2.413502 CCTAAAAAGTGTGCGCGCATTA 60.414 45.455 38.62 26.74 0.00 1.90
634 645 1.665735 CCTAAAAAGTGTGCGCGCATT 60.666 47.619 38.62 27.08 0.00 3.56
635 646 0.109781 CCTAAAAAGTGTGCGCGCAT 60.110 50.000 38.62 21.84 0.00 4.73
637 648 0.317519 AACCTAAAAAGTGTGCGCGC 60.318 50.000 27.26 27.26 0.00 6.86
641 652 8.657074 AATTTCCTAAAACCTAAAAAGTGTGC 57.343 30.769 0.00 0.00 0.00 4.57
701 712 3.509184 GGCAAGCAAGAGAGATTTCCTTT 59.491 43.478 0.00 0.00 0.00 3.11
702 713 3.087781 GGCAAGCAAGAGAGATTTCCTT 58.912 45.455 0.00 0.00 0.00 3.36
705 716 2.821307 CGGCAAGCAAGAGAGATTTC 57.179 50.000 0.00 0.00 0.00 2.17
728 740 0.390472 CGGCAAGTGTCTCCTCTTCC 60.390 60.000 0.00 0.00 0.00 3.46
733 745 1.071471 CAACCGGCAAGTGTCTCCT 59.929 57.895 0.00 0.00 0.00 3.69
778 3557 1.136891 GCTTTTGGCCCCATATGTCAC 59.863 52.381 0.00 0.00 34.27 3.67
785 3564 1.379843 CGGTAGCTTTTGGCCCCAT 60.380 57.895 0.00 0.00 43.05 4.00
834 3613 3.142838 GTGCGGCGGGGAGTAGTA 61.143 66.667 9.78 0.00 0.00 1.82
836 3615 4.514577 CTGTGCGGCGGGGAGTAG 62.515 72.222 9.78 0.00 0.00 2.57
969 3764 1.336755 GCGTTGGACTGGTTGTTGATT 59.663 47.619 0.00 0.00 0.00 2.57
978 3780 3.649277 CTCCTCGGCGTTGGACTGG 62.649 68.421 17.27 7.41 0.00 4.00
1013 3839 1.377725 CTGCCCTCCATTGTCGCTT 60.378 57.895 0.00 0.00 0.00 4.68
1541 7902 0.603569 CTCGCTACCCACTCACACTT 59.396 55.000 0.00 0.00 0.00 3.16
1585 7967 2.287009 GCAGACGAAACCAAAAGACAGG 60.287 50.000 0.00 0.00 0.00 4.00
1656 8069 1.528824 CGGAGAGCATCCCCATGTT 59.471 57.895 2.63 0.00 46.50 2.71
1658 8071 2.429058 CCGGAGAGCATCCCCATG 59.571 66.667 0.00 0.00 46.50 3.66
1692 8105 0.622136 TGTGGCCAAGAGATCAGCAT 59.378 50.000 7.24 0.00 0.00 3.79
1694 8107 1.760192 AATGTGGCCAAGAGATCAGC 58.240 50.000 7.24 0.00 0.00 4.26
1695 8108 4.015084 AGAAAATGTGGCCAAGAGATCAG 58.985 43.478 7.24 0.00 0.00 2.90
1754 8176 1.265635 TGAATTTTCAGAACACGGCCG 59.734 47.619 26.86 26.86 32.50 6.13
1916 8346 0.037975 CCCACAAGCCAGACATTTGC 60.038 55.000 0.00 0.00 0.00 3.68
1931 8361 7.178451 TGGAATTTCCTTTTTCTATCTTCCCAC 59.822 37.037 16.25 0.00 37.46 4.61
1985 8415 2.494870 GTTCCATCAGGCAAAGCAGAAT 59.505 45.455 0.00 0.00 33.74 2.40
2003 8439 4.260170 AGCCAAGAGATTCTCACATGTTC 58.740 43.478 15.83 0.00 32.06 3.18
2034 8470 9.908152 AAAAATGTAGCCAAAGAGTAATGTAAC 57.092 29.630 0.00 0.00 0.00 2.50
2035 8471 9.906660 CAAAAATGTAGCCAAAGAGTAATGTAA 57.093 29.630 0.00 0.00 0.00 2.41
2038 8474 8.816640 AACAAAAATGTAGCCAAAGAGTAATG 57.183 30.769 0.00 0.00 0.00 1.90
2041 8477 9.290988 TGATAACAAAAATGTAGCCAAAGAGTA 57.709 29.630 0.00 0.00 0.00 2.59
2042 8478 8.177119 TGATAACAAAAATGTAGCCAAAGAGT 57.823 30.769 0.00 0.00 0.00 3.24
2044 8480 8.402798 TCTGATAACAAAAATGTAGCCAAAGA 57.597 30.769 0.00 0.00 0.00 2.52
2045 8481 9.643693 AATCTGATAACAAAAATGTAGCCAAAG 57.356 29.630 0.00 0.00 0.00 2.77
2097 8533 4.372656 AGGATGACGCTATTTTCTGTAGC 58.627 43.478 0.00 0.00 40.83 3.58
2098 8534 6.042777 TCAAGGATGACGCTATTTTCTGTAG 58.957 40.000 0.00 0.00 0.00 2.74
2099 8535 5.972935 TCAAGGATGACGCTATTTTCTGTA 58.027 37.500 0.00 0.00 0.00 2.74
2100 8536 4.832248 TCAAGGATGACGCTATTTTCTGT 58.168 39.130 0.00 0.00 0.00 3.41
2101 8537 5.801350 TTCAAGGATGACGCTATTTTCTG 57.199 39.130 0.00 0.00 34.61 3.02
2102 8538 6.817765 TTTTCAAGGATGACGCTATTTTCT 57.182 33.333 0.00 0.00 34.61 2.52
2103 8539 9.173939 CATATTTTCAAGGATGACGCTATTTTC 57.826 33.333 0.00 0.00 34.61 2.29
2104 8540 7.649306 GCATATTTTCAAGGATGACGCTATTTT 59.351 33.333 0.00 0.00 34.61 1.82
2105 8541 7.013655 AGCATATTTTCAAGGATGACGCTATTT 59.986 33.333 0.00 0.00 34.61 1.40
2106 8542 6.488006 AGCATATTTTCAAGGATGACGCTATT 59.512 34.615 0.00 0.00 34.61 1.73
2107 8543 6.000219 AGCATATTTTCAAGGATGACGCTAT 59.000 36.000 0.00 0.00 34.61 2.97
2108 8544 5.368145 AGCATATTTTCAAGGATGACGCTA 58.632 37.500 0.00 0.00 34.61 4.26
2109 8545 4.202441 AGCATATTTTCAAGGATGACGCT 58.798 39.130 0.00 0.00 34.61 5.07
2110 8546 4.558538 AGCATATTTTCAAGGATGACGC 57.441 40.909 0.00 0.00 34.61 5.19
2111 8547 7.959651 GCTAATAGCATATTTTCAAGGATGACG 59.040 37.037 7.49 0.00 41.89 4.35
2112 8548 7.959651 CGCTAATAGCATATTTTCAAGGATGAC 59.040 37.037 13.15 0.00 42.58 3.06
2113 8549 7.661437 ACGCTAATAGCATATTTTCAAGGATGA 59.339 33.333 13.15 0.00 42.58 2.92
2114 8550 7.747799 CACGCTAATAGCATATTTTCAAGGATG 59.252 37.037 13.15 0.00 42.58 3.51
2115 8551 7.445402 ACACGCTAATAGCATATTTTCAAGGAT 59.555 33.333 13.15 0.00 42.58 3.24
2116 8552 6.765989 ACACGCTAATAGCATATTTTCAAGGA 59.234 34.615 13.15 0.00 42.58 3.36
2117 8553 6.959361 ACACGCTAATAGCATATTTTCAAGG 58.041 36.000 13.15 0.00 42.58 3.61
2137 8573 3.418619 ACGTTATAGCGCGTTATAACACG 59.581 43.478 39.93 34.77 42.56 4.49
2138 8574 4.670952 CACGTTATAGCGCGTTATAACAC 58.329 43.478 39.93 27.66 42.56 3.32
2139 8575 3.180189 GCACGTTATAGCGCGTTATAACA 59.820 43.478 39.93 21.77 42.56 2.41
2140 8576 3.423206 AGCACGTTATAGCGCGTTATAAC 59.577 43.478 36.19 36.19 40.58 1.89
2141 8577 3.631144 AGCACGTTATAGCGCGTTATAA 58.369 40.909 25.51 25.51 39.48 0.98
2142 8578 3.272439 AGCACGTTATAGCGCGTTATA 57.728 42.857 17.36 17.36 39.48 0.98
2143 8579 2.129823 AGCACGTTATAGCGCGTTAT 57.870 45.000 19.45 19.45 39.48 1.89
2144 8580 2.753989 TAGCACGTTATAGCGCGTTA 57.246 45.000 8.43 6.54 39.48 3.18
2145 8581 2.129823 ATAGCACGTTATAGCGCGTT 57.870 45.000 8.43 3.54 39.48 4.84
2146 8582 2.129823 AATAGCACGTTATAGCGCGT 57.870 45.000 8.43 0.00 42.45 6.01
2147 8583 2.026507 GCTAATAGCACGTTATAGCGCG 59.973 50.000 9.05 0.00 41.89 6.86
2148 8584 3.619751 GCTAATAGCACGTTATAGCGC 57.380 47.619 9.05 0.00 41.89 5.92
2160 8596 8.044060 TCAATATACAATGCCTTGCTAATAGC 57.956 34.615 5.12 5.12 42.82 2.97
2194 8630 7.378461 GCTATAGCATATAGAGAATTGTCTCGC 59.622 40.741 20.01 8.03 46.73 5.03
2195 8631 8.781067 GCTATAGCATATAGAGAATTGTCTCG 57.219 38.462 20.01 0.00 46.73 4.04
2196 8632 8.402472 ACGCTATAGCATATAGAGAATTGTCTC 58.598 37.037 23.99 0.00 45.16 3.36
2197 8633 8.187480 CACGCTATAGCATATAGAGAATTGTCT 58.813 37.037 23.99 10.33 42.21 3.41
2198 8634 7.971168 ACACGCTATAGCATATAGAGAATTGTC 59.029 37.037 23.99 0.00 42.21 3.18
2199 8635 7.831753 ACACGCTATAGCATATAGAGAATTGT 58.168 34.615 23.99 6.41 42.21 2.71
2200 8636 8.694975 AACACGCTATAGCATATAGAGAATTG 57.305 34.615 23.99 5.79 42.21 2.32
2207 8643 9.452065 CCACTAATAACACGCTATAGCATATAG 57.548 37.037 23.99 15.90 42.21 1.31
2208 8644 7.919091 GCCACTAATAACACGCTATAGCATATA 59.081 37.037 23.99 11.35 42.21 0.86
2209 8645 6.757010 GCCACTAATAACACGCTATAGCATAT 59.243 38.462 23.99 12.94 42.21 1.78
2210 8646 6.097356 GCCACTAATAACACGCTATAGCATA 58.903 40.000 23.99 11.35 42.21 3.14
2211 8647 4.929808 GCCACTAATAACACGCTATAGCAT 59.070 41.667 23.99 6.50 42.21 3.79
2212 8648 4.202172 TGCCACTAATAACACGCTATAGCA 60.202 41.667 23.99 4.83 42.21 3.49
2213 8649 4.304110 TGCCACTAATAACACGCTATAGC 58.696 43.478 15.09 15.09 37.78 2.97
2214 8650 8.703604 ATATTGCCACTAATAACACGCTATAG 57.296 34.615 0.00 0.00 0.00 1.31
2215 8651 9.797556 CTATATTGCCACTAATAACACGCTATA 57.202 33.333 0.00 0.00 0.00 1.31
2216 8652 7.277981 GCTATATTGCCACTAATAACACGCTAT 59.722 37.037 0.00 0.00 0.00 2.97
2217 8653 6.588756 GCTATATTGCCACTAATAACACGCTA 59.411 38.462 0.00 0.00 0.00 4.26
2218 8654 5.408604 GCTATATTGCCACTAATAACACGCT 59.591 40.000 0.00 0.00 0.00 5.07
2219 8655 5.618561 GCTATATTGCCACTAATAACACGC 58.381 41.667 0.00 0.00 0.00 5.34
2220 8656 5.667888 GCGCTATATTGCCACTAATAACACG 60.668 44.000 0.00 0.00 0.00 4.49
2221 8657 5.618561 GCGCTATATTGCCACTAATAACAC 58.381 41.667 0.00 0.00 0.00 3.32
2222 8658 4.387559 CGCGCTATATTGCCACTAATAACA 59.612 41.667 5.56 0.00 0.00 2.41
2223 8659 4.724036 GCGCGCTATATTGCCACTAATAAC 60.724 45.833 26.67 0.00 0.00 1.89
2224 8660 3.369756 GCGCGCTATATTGCCACTAATAA 59.630 43.478 26.67 0.00 0.00 1.40
2225 8661 2.927477 GCGCGCTATATTGCCACTAATA 59.073 45.455 26.67 0.00 0.00 0.98
2226 8662 1.732259 GCGCGCTATATTGCCACTAAT 59.268 47.619 26.67 0.00 0.00 1.73
2227 8663 1.144969 GCGCGCTATATTGCCACTAA 58.855 50.000 26.67 0.00 0.00 2.24
2228 8664 0.317160 AGCGCGCTATATTGCCACTA 59.683 50.000 35.79 0.00 0.00 2.74
2229 8665 0.317160 TAGCGCGCTATATTGCCACT 59.683 50.000 35.48 11.63 0.00 4.00
2230 8666 1.359848 ATAGCGCGCTATATTGCCAC 58.640 50.000 43.42 7.86 37.47 5.01
2231 8667 2.093306 AATAGCGCGCTATATTGCCA 57.907 45.000 43.81 24.51 38.20 4.92
2232 8668 3.471495 AAAATAGCGCGCTATATTGCC 57.529 42.857 43.81 10.26 38.20 4.52
2262 8698 9.659830 GTTCGACAATAGTTGTTTTGAGTATTT 57.340 29.630 0.00 0.00 45.52 1.40
2263 8699 8.287503 GGTTCGACAATAGTTGTTTTGAGTATT 58.712 33.333 0.00 0.00 45.52 1.89
2264 8700 7.660208 AGGTTCGACAATAGTTGTTTTGAGTAT 59.340 33.333 0.00 0.00 45.52 2.12
2265 8701 6.987992 AGGTTCGACAATAGTTGTTTTGAGTA 59.012 34.615 0.00 0.00 45.52 2.59
2266 8702 5.820947 AGGTTCGACAATAGTTGTTTTGAGT 59.179 36.000 0.00 0.00 45.52 3.41
2267 8703 6.202954 AGAGGTTCGACAATAGTTGTTTTGAG 59.797 38.462 0.00 0.00 45.52 3.02
2268 8704 6.053005 AGAGGTTCGACAATAGTTGTTTTGA 58.947 36.000 0.00 0.00 45.52 2.69
2269 8705 6.300354 AGAGGTTCGACAATAGTTGTTTTG 57.700 37.500 0.00 0.00 45.52 2.44
2270 8706 6.937436 AAGAGGTTCGACAATAGTTGTTTT 57.063 33.333 0.00 0.00 45.52 2.43
2271 8707 6.937436 AAAGAGGTTCGACAATAGTTGTTT 57.063 33.333 0.00 0.00 45.52 2.83
2272 8708 9.886132 ATATAAAGAGGTTCGACAATAGTTGTT 57.114 29.630 0.00 0.00 45.52 2.83
2274 8710 8.691727 CGATATAAAGAGGTTCGACAATAGTTG 58.308 37.037 0.00 0.00 31.74 3.16
2275 8711 8.627403 TCGATATAAAGAGGTTCGACAATAGTT 58.373 33.333 0.00 0.00 34.24 2.24
2276 8712 8.162878 TCGATATAAAGAGGTTCGACAATAGT 57.837 34.615 0.00 0.00 34.24 2.12
2283 8719 8.162878 AGTTATGTCGATATAAAGAGGTTCGA 57.837 34.615 15.18 0.00 36.57 3.71
2284 8720 8.798748 AAGTTATGTCGATATAAAGAGGTTCG 57.201 34.615 15.18 0.00 0.00 3.95
2313 8749 6.206634 AGTTCTGTCAATATTCCTCGCAAAAA 59.793 34.615 0.00 0.00 0.00 1.94
2314 8750 5.705441 AGTTCTGTCAATATTCCTCGCAAAA 59.295 36.000 0.00 0.00 0.00 2.44
2315 8751 5.245531 AGTTCTGTCAATATTCCTCGCAAA 58.754 37.500 0.00 0.00 0.00 3.68
2316 8752 4.832248 AGTTCTGTCAATATTCCTCGCAA 58.168 39.130 0.00 0.00 0.00 4.85
2317 8753 4.471904 AGTTCTGTCAATATTCCTCGCA 57.528 40.909 0.00 0.00 0.00 5.10
2318 8754 4.631813 ACAAGTTCTGTCAATATTCCTCGC 59.368 41.667 0.00 0.00 29.87 5.03
2319 8755 7.827819 TTACAAGTTCTGTCAATATTCCTCG 57.172 36.000 0.00 0.00 39.64 4.63
2320 8756 9.994432 CATTTACAAGTTCTGTCAATATTCCTC 57.006 33.333 0.00 0.00 39.64 3.71
2321 8757 8.462016 GCATTTACAAGTTCTGTCAATATTCCT 58.538 33.333 0.00 0.00 39.64 3.36
2322 8758 7.702348 GGCATTTACAAGTTCTGTCAATATTCC 59.298 37.037 0.00 0.00 39.64 3.01
2323 8759 8.243426 TGGCATTTACAAGTTCTGTCAATATTC 58.757 33.333 0.00 0.00 39.64 1.75
2324 8760 8.121305 TGGCATTTACAAGTTCTGTCAATATT 57.879 30.769 0.00 0.00 39.64 1.28
2325 8761 7.701539 TGGCATTTACAAGTTCTGTCAATAT 57.298 32.000 0.00 0.00 39.64 1.28
2326 8762 7.537715 CATGGCATTTACAAGTTCTGTCAATA 58.462 34.615 0.00 0.00 39.64 1.90
2327 8763 6.392354 CATGGCATTTACAAGTTCTGTCAAT 58.608 36.000 0.00 0.00 39.64 2.57
2328 8764 5.771469 CATGGCATTTACAAGTTCTGTCAA 58.229 37.500 0.00 0.00 39.64 3.18
2329 8765 4.321156 GCATGGCATTTACAAGTTCTGTCA 60.321 41.667 0.00 0.00 39.64 3.58
2330 8766 4.082571 AGCATGGCATTTACAAGTTCTGTC 60.083 41.667 0.00 0.00 39.64 3.51
2331 8767 3.828451 AGCATGGCATTTACAAGTTCTGT 59.172 39.130 0.00 0.00 42.47 3.41
2332 8768 4.445452 AGCATGGCATTTACAAGTTCTG 57.555 40.909 0.00 0.00 0.00 3.02
2333 8769 5.256474 AGTAGCATGGCATTTACAAGTTCT 58.744 37.500 16.78 0.00 0.00 3.01
2334 8770 5.449177 GGAGTAGCATGGCATTTACAAGTTC 60.449 44.000 16.78 8.50 0.00 3.01
2335 8771 4.399303 GGAGTAGCATGGCATTTACAAGTT 59.601 41.667 16.78 0.00 0.00 2.66
2336 8772 3.947834 GGAGTAGCATGGCATTTACAAGT 59.052 43.478 16.78 1.96 0.00 3.16
2337 8773 3.316308 GGGAGTAGCATGGCATTTACAAG 59.684 47.826 16.78 0.00 0.00 3.16
2338 8774 3.287222 GGGAGTAGCATGGCATTTACAA 58.713 45.455 16.78 0.00 0.00 2.41
2339 8775 2.744823 CGGGAGTAGCATGGCATTTACA 60.745 50.000 16.78 0.00 0.00 2.41
2340 8776 1.873591 CGGGAGTAGCATGGCATTTAC 59.126 52.381 0.00 4.01 0.00 2.01
2341 8777 1.202758 CCGGGAGTAGCATGGCATTTA 60.203 52.381 0.00 0.00 0.00 1.40
2342 8778 0.466189 CCGGGAGTAGCATGGCATTT 60.466 55.000 0.00 0.00 0.00 2.32
2343 8779 1.149174 CCGGGAGTAGCATGGCATT 59.851 57.895 0.00 0.00 0.00 3.56
2344 8780 1.130054 ATCCGGGAGTAGCATGGCAT 61.130 55.000 0.00 0.00 0.00 4.40
2345 8781 1.766059 ATCCGGGAGTAGCATGGCA 60.766 57.895 0.00 0.00 0.00 4.92
2346 8782 1.302033 CATCCGGGAGTAGCATGGC 60.302 63.158 0.00 0.00 0.00 4.40
2347 8783 1.273606 CTACATCCGGGAGTAGCATGG 59.726 57.143 17.37 0.45 32.25 3.66
2348 8784 1.273606 CCTACATCCGGGAGTAGCATG 59.726 57.143 21.62 10.98 37.09 4.06
2349 8785 1.133136 ACCTACATCCGGGAGTAGCAT 60.133 52.381 21.62 12.91 37.09 3.79
2350 8786 0.260816 ACCTACATCCGGGAGTAGCA 59.739 55.000 21.62 0.00 37.09 3.49
2351 8787 1.885233 GTACCTACATCCGGGAGTAGC 59.115 57.143 21.62 10.05 37.09 3.58
2352 8788 3.219176 TGTACCTACATCCGGGAGTAG 57.781 52.381 20.64 20.64 37.92 2.57
2353 8789 3.889859 ATGTACCTACATCCGGGAGTA 57.110 47.619 0.00 4.03 42.96 2.59
2354 8790 2.769602 ATGTACCTACATCCGGGAGT 57.230 50.000 0.00 2.82 42.96 3.85
2367 8803 4.462483 TCATTTTTCTTGGCAGGATGTACC 59.538 41.667 0.00 0.00 39.31 3.34
2368 8804 5.048083 TGTCATTTTTCTTGGCAGGATGTAC 60.048 40.000 0.00 0.00 39.31 2.90
2369 8805 5.076182 TGTCATTTTTCTTGGCAGGATGTA 58.924 37.500 0.00 0.00 39.31 2.29
2370 8806 3.896888 TGTCATTTTTCTTGGCAGGATGT 59.103 39.130 0.00 0.00 39.31 3.06
2371 8807 4.524316 TGTCATTTTTCTTGGCAGGATG 57.476 40.909 0.00 0.00 40.87 3.51
2372 8808 5.549742 TTTGTCATTTTTCTTGGCAGGAT 57.450 34.783 0.00 0.00 29.08 3.24
2373 8809 5.350504 TTTTGTCATTTTTCTTGGCAGGA 57.649 34.783 0.00 0.00 29.08 3.86
2397 8833 9.978044 GAAGGGAGTATAAGTTATTATTCACGT 57.022 33.333 0.00 0.00 33.58 4.49
2398 8834 9.125906 CGAAGGGAGTATAAGTTATTATTCACG 57.874 37.037 0.00 0.00 33.58 4.35
2399 8835 9.978044 ACGAAGGGAGTATAAGTTATTATTCAC 57.022 33.333 0.00 0.00 33.58 3.18
2405 8841 9.729281 TTTTTGACGAAGGGAGTATAAGTTATT 57.271 29.630 0.00 0.00 0.00 1.40
2429 8865 8.608317 CCACGTTCATTTAAAGGACAAATTTTT 58.392 29.630 1.27 0.00 0.00 1.94
2430 8866 7.766738 ACCACGTTCATTTAAAGGACAAATTTT 59.233 29.630 1.27 0.00 0.00 1.82
2431 8867 7.223777 CACCACGTTCATTTAAAGGACAAATTT 59.776 33.333 1.27 0.00 0.00 1.82
2432 8868 6.699642 CACCACGTTCATTTAAAGGACAAATT 59.300 34.615 1.27 0.00 0.00 1.82
2433 8869 6.212955 CACCACGTTCATTTAAAGGACAAAT 58.787 36.000 1.27 0.00 0.00 2.32
2434 8870 5.583495 CACCACGTTCATTTAAAGGACAAA 58.417 37.500 1.27 0.00 0.00 2.83
2435 8871 4.498345 GCACCACGTTCATTTAAAGGACAA 60.498 41.667 1.27 0.00 0.00 3.18
2436 8872 3.003897 GCACCACGTTCATTTAAAGGACA 59.996 43.478 1.27 0.00 0.00 4.02
2437 8873 3.252458 AGCACCACGTTCATTTAAAGGAC 59.748 43.478 1.27 0.00 0.00 3.85
2438 8874 3.482436 AGCACCACGTTCATTTAAAGGA 58.518 40.909 0.00 0.00 0.00 3.36
2439 8875 3.915437 AGCACCACGTTCATTTAAAGG 57.085 42.857 0.00 0.00 0.00 3.11
2440 8876 5.351233 TGTAGCACCACGTTCATTTAAAG 57.649 39.130 0.00 0.00 0.00 1.85
2441 8877 5.950758 ATGTAGCACCACGTTCATTTAAA 57.049 34.783 0.00 0.00 0.00 1.52
2442 8878 5.062433 CGTATGTAGCACCACGTTCATTTAA 59.938 40.000 0.00 0.00 0.00 1.52
2443 8879 4.563580 CGTATGTAGCACCACGTTCATTTA 59.436 41.667 0.00 0.00 0.00 1.40
2444 8880 3.369756 CGTATGTAGCACCACGTTCATTT 59.630 43.478 0.00 0.00 0.00 2.32
2445 8881 2.927477 CGTATGTAGCACCACGTTCATT 59.073 45.455 0.00 0.00 0.00 2.57
2446 8882 2.164827 TCGTATGTAGCACCACGTTCAT 59.835 45.455 0.00 0.00 35.91 2.57
2447 8883 1.540707 TCGTATGTAGCACCACGTTCA 59.459 47.619 0.00 0.00 35.91 3.18
2448 8884 1.916000 GTCGTATGTAGCACCACGTTC 59.084 52.381 0.00 0.00 35.91 3.95
2449 8885 1.730121 CGTCGTATGTAGCACCACGTT 60.730 52.381 0.00 0.00 35.91 3.99
2450 8886 0.179181 CGTCGTATGTAGCACCACGT 60.179 55.000 0.00 0.00 35.91 4.49
2451 8887 0.097499 TCGTCGTATGTAGCACCACG 59.903 55.000 0.00 0.00 35.78 4.94
2452 8888 2.182825 CTTCGTCGTATGTAGCACCAC 58.817 52.381 0.00 0.00 0.00 4.16
2453 8889 1.133598 CCTTCGTCGTATGTAGCACCA 59.866 52.381 0.00 0.00 0.00 4.17
2454 8890 1.535437 CCCTTCGTCGTATGTAGCACC 60.535 57.143 0.00 0.00 0.00 5.01
2455 8891 1.402968 TCCCTTCGTCGTATGTAGCAC 59.597 52.381 0.00 0.00 0.00 4.40
2456 8892 1.674441 CTCCCTTCGTCGTATGTAGCA 59.326 52.381 0.00 0.00 0.00 3.49
2457 8893 1.674962 ACTCCCTTCGTCGTATGTAGC 59.325 52.381 0.00 0.00 0.00 3.58
2458 8894 4.514441 ACATACTCCCTTCGTCGTATGTAG 59.486 45.833 11.01 0.00 46.13 2.74
2459 8895 4.274214 CACATACTCCCTTCGTCGTATGTA 59.726 45.833 12.00 0.00 46.20 2.29
2460 8896 3.285484 ACATACTCCCTTCGTCGTATGT 58.715 45.455 7.80 7.80 44.35 2.29
2461 8897 3.066342 ACACATACTCCCTTCGTCGTATG 59.934 47.826 0.00 0.00 42.86 2.39
2462 8898 3.285484 ACACATACTCCCTTCGTCGTAT 58.715 45.455 0.00 0.00 0.00 3.06
2463 8899 2.715046 ACACATACTCCCTTCGTCGTA 58.285 47.619 0.00 0.00 0.00 3.43
2464 8900 1.542492 ACACATACTCCCTTCGTCGT 58.458 50.000 0.00 0.00 0.00 4.34
2465 8901 2.094906 TCAACACATACTCCCTTCGTCG 60.095 50.000 0.00 0.00 0.00 5.12
2466 8902 3.587797 TCAACACATACTCCCTTCGTC 57.412 47.619 0.00 0.00 0.00 4.20
2467 8903 4.553330 AATCAACACATACTCCCTTCGT 57.447 40.909 0.00 0.00 0.00 3.85
2468 8904 5.880054 AAAATCAACACATACTCCCTTCG 57.120 39.130 0.00 0.00 0.00 3.79
2490 8926 5.578005 TTCACGGTATTGTTGGTGAAAAA 57.422 34.783 3.23 0.00 43.94 1.94
2493 8929 5.299531 TCAATTTCACGGTATTGTTGGTGAA 59.700 36.000 1.67 1.67 44.87 3.18
2494 8930 4.822350 TCAATTTCACGGTATTGTTGGTGA 59.178 37.500 2.93 0.00 37.61 4.02
2495 8931 5.114785 TCAATTTCACGGTATTGTTGGTG 57.885 39.130 2.93 0.00 34.25 4.17
2496 8932 5.105917 GGATCAATTTCACGGTATTGTTGGT 60.106 40.000 0.00 0.00 34.25 3.67
2497 8933 5.339990 GGATCAATTTCACGGTATTGTTGG 58.660 41.667 0.00 0.00 34.25 3.77
2498 8934 5.027737 CGGATCAATTTCACGGTATTGTTG 58.972 41.667 0.00 0.00 34.25 3.33
2499 8935 4.698304 ACGGATCAATTTCACGGTATTGTT 59.302 37.500 0.00 0.00 34.25 2.83
2500 8936 4.258543 ACGGATCAATTTCACGGTATTGT 58.741 39.130 0.00 0.00 34.25 2.71
2501 8937 4.875544 ACGGATCAATTTCACGGTATTG 57.124 40.909 0.00 0.00 33.96 1.90
2502 8938 5.890424 AAACGGATCAATTTCACGGTATT 57.110 34.783 0.00 0.00 0.00 1.89
2503 8939 6.110707 AGTAAACGGATCAATTTCACGGTAT 58.889 36.000 0.00 0.00 0.00 2.73
2504 8940 5.481105 AGTAAACGGATCAATTTCACGGTA 58.519 37.500 0.00 0.00 0.00 4.02
2505 8941 4.320870 AGTAAACGGATCAATTTCACGGT 58.679 39.130 0.00 0.00 0.00 4.83
2506 8942 4.939509 AGTAAACGGATCAATTTCACGG 57.060 40.909 0.00 0.00 0.00 4.94
2507 8943 8.597227 TGTATTAGTAAACGGATCAATTTCACG 58.403 33.333 0.00 0.00 0.00 4.35
2512 8948 9.661563 TCTGTTGTATTAGTAAACGGATCAATT 57.338 29.630 0.00 0.00 34.95 2.32
2513 8949 9.661563 TTCTGTTGTATTAGTAAACGGATCAAT 57.338 29.630 0.00 0.00 38.60 2.57
2514 8950 9.146984 CTTCTGTTGTATTAGTAAACGGATCAA 57.853 33.333 0.00 0.00 38.60 2.57
2515 8951 7.762615 CCTTCTGTTGTATTAGTAAACGGATCA 59.237 37.037 0.00 0.00 38.60 2.92
2516 8952 7.763071 ACCTTCTGTTGTATTAGTAAACGGATC 59.237 37.037 0.00 0.00 38.60 3.36
2517 8953 7.618137 ACCTTCTGTTGTATTAGTAAACGGAT 58.382 34.615 0.00 0.00 38.60 4.18
2518 8954 6.996509 ACCTTCTGTTGTATTAGTAAACGGA 58.003 36.000 0.00 0.00 37.41 4.69
2519 8955 7.662604 AACCTTCTGTTGTATTAGTAAACGG 57.337 36.000 0.00 0.00 35.31 4.44
2533 8969 4.323104 GCCTCATCTACTCAACCTTCTGTT 60.323 45.833 0.00 0.00 37.80 3.16
2534 8970 3.196685 GCCTCATCTACTCAACCTTCTGT 59.803 47.826 0.00 0.00 0.00 3.41
2535 8971 3.196469 TGCCTCATCTACTCAACCTTCTG 59.804 47.826 0.00 0.00 0.00 3.02
2536 8972 3.445008 TGCCTCATCTACTCAACCTTCT 58.555 45.455 0.00 0.00 0.00 2.85
2537 8973 3.895232 TGCCTCATCTACTCAACCTTC 57.105 47.619 0.00 0.00 0.00 3.46
2538 8974 3.776969 TGATGCCTCATCTACTCAACCTT 59.223 43.478 8.11 0.00 41.06 3.50
2539 8975 3.378512 TGATGCCTCATCTACTCAACCT 58.621 45.455 8.11 0.00 41.06 3.50
2540 8976 3.827008 TGATGCCTCATCTACTCAACC 57.173 47.619 8.11 0.00 41.06 3.77
2541 8977 4.808364 GTCTTGATGCCTCATCTACTCAAC 59.192 45.833 8.11 0.00 41.06 3.18
2542 8978 4.440663 CGTCTTGATGCCTCATCTACTCAA 60.441 45.833 8.11 0.00 41.06 3.02
2543 8979 3.067320 CGTCTTGATGCCTCATCTACTCA 59.933 47.826 8.11 0.00 41.06 3.41
2544 8980 3.316588 TCGTCTTGATGCCTCATCTACTC 59.683 47.826 8.11 0.00 41.06 2.59
2545 8981 3.291584 TCGTCTTGATGCCTCATCTACT 58.708 45.455 8.11 0.00 41.06 2.57
2546 8982 3.717400 TCGTCTTGATGCCTCATCTAC 57.283 47.619 8.11 3.87 41.06 2.59
2547 8983 5.711976 TCATATCGTCTTGATGCCTCATCTA 59.288 40.000 8.11 0.48 41.06 1.98
2548 8984 4.525874 TCATATCGTCTTGATGCCTCATCT 59.474 41.667 8.11 0.00 41.06 2.90
2549 8985 4.624882 GTCATATCGTCTTGATGCCTCATC 59.375 45.833 0.00 0.13 40.88 2.92
2550 8986 4.564041 GTCATATCGTCTTGATGCCTCAT 58.436 43.478 0.00 0.00 37.99 2.90
2551 8987 3.550842 CGTCATATCGTCTTGATGCCTCA 60.551 47.826 0.00 0.00 37.99 3.86
2552 8988 2.983136 CGTCATATCGTCTTGATGCCTC 59.017 50.000 0.00 0.00 37.99 4.70
2553 8989 2.864097 GCGTCATATCGTCTTGATGCCT 60.864 50.000 13.66 0.00 45.09 4.75
2554 8990 1.457303 GCGTCATATCGTCTTGATGCC 59.543 52.381 13.66 2.03 45.09 4.40
2555 8991 1.123217 CGCGTCATATCGTCTTGATGC 59.877 52.381 0.00 14.26 46.54 3.91
2556 8992 1.716050 CCGCGTCATATCGTCTTGATG 59.284 52.381 4.92 0.00 37.99 3.07
2557 8993 1.335964 CCCGCGTCATATCGTCTTGAT 60.336 52.381 4.92 0.00 41.30 2.57
2558 8994 0.030235 CCCGCGTCATATCGTCTTGA 59.970 55.000 4.92 0.00 0.00 3.02
2559 8995 1.548973 GCCCGCGTCATATCGTCTTG 61.549 60.000 4.92 0.00 0.00 3.02
2560 8996 1.299926 GCCCGCGTCATATCGTCTT 60.300 57.895 4.92 0.00 0.00 3.01
2561 8997 2.335369 GCCCGCGTCATATCGTCT 59.665 61.111 4.92 0.00 0.00 4.18
2562 8998 3.097728 CGCCCGCGTCATATCGTC 61.098 66.667 4.92 0.00 34.35 4.20
2563 8999 3.588906 TCGCCCGCGTCATATCGT 61.589 61.111 4.92 0.00 40.74 3.73
2564 9000 3.097728 GTCGCCCGCGTCATATCG 61.098 66.667 4.92 0.00 40.74 2.92
2565 9001 3.097728 CGTCGCCCGCGTCATATC 61.098 66.667 4.92 0.00 40.74 1.63
2611 9047 3.411517 ACCCAAGGCCGATGGAGG 61.412 66.667 26.78 15.86 40.56 4.30
2612 9048 2.124570 CACCCAAGGCCGATGGAG 60.125 66.667 26.78 19.54 40.56 3.86
2613 9049 2.933287 ACACCCAAGGCCGATGGA 60.933 61.111 26.78 0.00 40.56 3.41
2614 9050 2.751436 CACACCCAAGGCCGATGG 60.751 66.667 20.40 20.40 37.71 3.51
2615 9051 2.751436 CCACACCCAAGGCCGATG 60.751 66.667 0.00 0.00 0.00 3.84
2616 9052 4.047125 CCCACACCCAAGGCCGAT 62.047 66.667 0.00 0.00 0.00 4.18
2621 9057 4.579384 ACGTGCCCACACCCAAGG 62.579 66.667 0.00 0.00 44.40 3.61
2622 9058 2.978010 GACGTGCCCACACCCAAG 60.978 66.667 0.00 0.00 44.40 3.61
2623 9059 4.920112 CGACGTGCCCACACCCAA 62.920 66.667 0.00 0.00 44.40 4.12
2635 9071 4.590522 AAAACCGACCGCCGACGT 62.591 61.111 0.00 0.00 41.76 4.34
2636 9072 4.067016 CAAAACCGACCGCCGACG 62.067 66.667 0.00 0.00 41.76 5.12
2637 9073 3.719144 CCAAAACCGACCGCCGAC 61.719 66.667 0.00 0.00 41.76 4.79
2638 9074 4.992511 CCCAAAACCGACCGCCGA 62.993 66.667 0.00 0.00 41.76 5.54
2643 9079 2.358984 TAGCGCCCAAAACCGACC 60.359 61.111 2.29 0.00 0.00 4.79
2644 9080 3.035576 GCTAGCGCCCAAAACCGAC 62.036 63.158 2.29 0.00 0.00 4.79
2645 9081 2.744709 GCTAGCGCCCAAAACCGA 60.745 61.111 2.29 0.00 0.00 4.69
2646 9082 4.160635 CGCTAGCGCCCAAAACCG 62.161 66.667 26.07 0.00 0.00 4.44
2647 9083 3.810896 CCGCTAGCGCCCAAAACC 61.811 66.667 31.35 0.00 38.24 3.27
2648 9084 2.744709 TCCGCTAGCGCCCAAAAC 60.745 61.111 31.35 0.00 38.24 2.43
2649 9085 2.435938 CTCCGCTAGCGCCCAAAA 60.436 61.111 31.35 10.44 38.24 2.44
2650 9086 3.659089 GACTCCGCTAGCGCCCAAA 62.659 63.158 31.35 12.15 38.24 3.28
2651 9087 4.143333 GACTCCGCTAGCGCCCAA 62.143 66.667 31.35 14.57 38.24 4.12
2653 9089 4.577246 CTGACTCCGCTAGCGCCC 62.577 72.222 31.35 18.26 38.24 6.13
2654 9090 3.477224 CTCTGACTCCGCTAGCGCC 62.477 68.421 31.35 18.60 38.24 6.53
2655 9091 1.994507 TTCTCTGACTCCGCTAGCGC 61.995 60.000 31.35 17.87 38.24 5.92
2656 9092 0.665835 ATTCTCTGACTCCGCTAGCG 59.334 55.000 29.93 29.93 39.44 4.26
2657 9093 1.678627 TCATTCTCTGACTCCGCTAGC 59.321 52.381 4.06 4.06 0.00 3.42
2658 9094 2.293122 CCTCATTCTCTGACTCCGCTAG 59.707 54.545 0.00 0.00 0.00 3.42
2659 9095 2.092375 TCCTCATTCTCTGACTCCGCTA 60.092 50.000 0.00 0.00 0.00 4.26
2660 9096 1.110442 CCTCATTCTCTGACTCCGCT 58.890 55.000 0.00 0.00 0.00 5.52
2661 9097 1.107114 TCCTCATTCTCTGACTCCGC 58.893 55.000 0.00 0.00 0.00 5.54
2662 9098 1.064803 CGTCCTCATTCTCTGACTCCG 59.935 57.143 0.00 0.00 0.00 4.63
2663 9099 2.098443 GTCGTCCTCATTCTCTGACTCC 59.902 54.545 0.00 0.00 0.00 3.85
2664 9100 2.223157 CGTCGTCCTCATTCTCTGACTC 60.223 54.545 0.00 0.00 0.00 3.36
2665 9101 1.740585 CGTCGTCCTCATTCTCTGACT 59.259 52.381 0.00 0.00 0.00 3.41
2666 9102 1.738350 TCGTCGTCCTCATTCTCTGAC 59.262 52.381 0.00 0.00 0.00 3.51
2667 9103 1.738350 GTCGTCGTCCTCATTCTCTGA 59.262 52.381 0.00 0.00 0.00 3.27
2668 9104 1.530031 CGTCGTCGTCCTCATTCTCTG 60.530 57.143 0.00 0.00 0.00 3.35
2669 9105 0.727970 CGTCGTCGTCCTCATTCTCT 59.272 55.000 0.00 0.00 0.00 3.10
2670 9106 0.725686 TCGTCGTCGTCCTCATTCTC 59.274 55.000 1.33 0.00 38.33 2.87
2671 9107 0.447011 GTCGTCGTCGTCCTCATTCT 59.553 55.000 1.33 0.00 38.33 2.40
2672 9108 2.927437 GTCGTCGTCGTCCTCATTC 58.073 57.895 1.33 0.00 38.33 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.