Multiple sequence alignment - TraesCS3A01G112600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G112600 | chr3A | 100.000 | 5991 | 0 | 0 | 797 | 6787 | 80088367 | 80094357 | 0.000000e+00 | 11064.0 |
1 | TraesCS3A01G112600 | chr3A | 100.000 | 459 | 0 | 0 | 1 | 459 | 80087571 | 80088029 | 0.000000e+00 | 848.0 |
2 | TraesCS3A01G112600 | chr3A | 91.270 | 126 | 11 | 0 | 2905 | 3030 | 566125030 | 566124905 | 9.050000e-39 | 172.0 |
3 | TraesCS3A01G112600 | chr3A | 93.827 | 81 | 3 | 2 | 2569 | 2648 | 80090218 | 80090139 | 3.320000e-23 | 121.0 |
4 | TraesCS3A01G112600 | chr3A | 94.118 | 51 | 2 | 1 | 1 | 50 | 110030145 | 110030195 | 7.300000e-10 | 76.8 |
5 | TraesCS3A01G112600 | chr3A | 90.909 | 55 | 3 | 2 | 1 | 54 | 644820482 | 644820535 | 9.440000e-09 | 73.1 |
6 | TraesCS3A01G112600 | chr3B | 92.051 | 2969 | 146 | 31 | 3394 | 6310 | 113917186 | 113920116 | 0.000000e+00 | 4093.0 |
7 | TraesCS3A01G112600 | chr3B | 92.355 | 1805 | 93 | 24 | 797 | 2591 | 113914460 | 113916229 | 0.000000e+00 | 2527.0 |
8 | TraesCS3A01G112600 | chr3B | 94.601 | 426 | 19 | 3 | 37 | 459 | 113913932 | 113914356 | 0.000000e+00 | 656.0 |
9 | TraesCS3A01G112600 | chr3B | 94.737 | 399 | 10 | 4 | 3070 | 3468 | 113916844 | 113917231 | 1.620000e-170 | 610.0 |
10 | TraesCS3A01G112600 | chr3B | 90.786 | 369 | 18 | 11 | 6421 | 6786 | 113920280 | 113920635 | 4.760000e-131 | 479.0 |
11 | TraesCS3A01G112600 | chr3B | 93.043 | 230 | 13 | 2 | 2651 | 2877 | 113916617 | 113916846 | 3.920000e-87 | 333.0 |
12 | TraesCS3A01G112600 | chr3B | 86.916 | 107 | 9 | 5 | 3291 | 3395 | 794105960 | 794105857 | 1.550000e-21 | 115.0 |
13 | TraesCS3A01G112600 | chr3B | 87.879 | 66 | 3 | 5 | 1 | 63 | 784067313 | 784067250 | 9.440000e-09 | 73.1 |
14 | TraesCS3A01G112600 | chr3B | 93.617 | 47 | 2 | 1 | 6305 | 6350 | 113920229 | 113920275 | 1.220000e-07 | 69.4 |
15 | TraesCS3A01G112600 | chr3B | 93.333 | 45 | 2 | 1 | 5077 | 5120 | 260865199 | 260865243 | 1.580000e-06 | 65.8 |
16 | TraesCS3A01G112600 | chr3B | 100.000 | 31 | 0 | 0 | 113 | 143 | 643984736 | 643984766 | 2.640000e-04 | 58.4 |
17 | TraesCS3A01G112600 | chr3D | 92.133 | 2898 | 117 | 40 | 3394 | 6238 | 68079311 | 68076472 | 0.000000e+00 | 3986.0 |
18 | TraesCS3A01G112600 | chr3D | 95.669 | 1016 | 35 | 3 | 1893 | 2902 | 68080678 | 68079666 | 0.000000e+00 | 1624.0 |
19 | TraesCS3A01G112600 | chr3D | 92.207 | 1065 | 52 | 9 | 797 | 1856 | 68081716 | 68080678 | 0.000000e+00 | 1478.0 |
20 | TraesCS3A01G112600 | chr3D | 95.567 | 406 | 14 | 3 | 3065 | 3468 | 68079669 | 68079266 | 0.000000e+00 | 647.0 |
21 | TraesCS3A01G112600 | chr3D | 89.376 | 433 | 19 | 15 | 37 | 459 | 68082230 | 68081815 | 2.810000e-143 | 520.0 |
22 | TraesCS3A01G112600 | chr3D | 94.603 | 315 | 14 | 3 | 6474 | 6787 | 68076330 | 68076018 | 1.020000e-132 | 484.0 |
23 | TraesCS3A01G112600 | chr3D | 93.671 | 158 | 9 | 1 | 2907 | 3064 | 292035379 | 292035535 | 1.140000e-57 | 235.0 |
24 | TraesCS3A01G112600 | chr3D | 87.429 | 175 | 17 | 4 | 6616 | 6787 | 549058932 | 549059104 | 5.370000e-46 | 196.0 |
25 | TraesCS3A01G112600 | chr3D | 91.971 | 137 | 8 | 2 | 6312 | 6446 | 68076463 | 68076328 | 8.990000e-44 | 189.0 |
26 | TraesCS3A01G112600 | chr3D | 90.323 | 124 | 12 | 0 | 2905 | 3028 | 422752294 | 422752417 | 5.450000e-36 | 163.0 |
27 | TraesCS3A01G112600 | chr3D | 81.928 | 166 | 22 | 8 | 6616 | 6778 | 328700075 | 328700235 | 4.270000e-27 | 134.0 |
28 | TraesCS3A01G112600 | chr3D | 92.593 | 81 | 4 | 2 | 2569 | 2648 | 68079919 | 68079998 | 1.550000e-21 | 115.0 |
29 | TraesCS3A01G112600 | chr3D | 83.529 | 85 | 8 | 6 | 6618 | 6698 | 313282406 | 313282324 | 2.630000e-09 | 75.0 |
30 | TraesCS3A01G112600 | chr4A | 94.969 | 159 | 8 | 0 | 2906 | 3064 | 688093051 | 688092893 | 4.060000e-62 | 250.0 |
31 | TraesCS3A01G112600 | chr4A | 88.068 | 176 | 17 | 4 | 6613 | 6787 | 724482037 | 724482209 | 8.920000e-49 | 206.0 |
32 | TraesCS3A01G112600 | chr4A | 84.404 | 109 | 12 | 5 | 6616 | 6723 | 29496117 | 29496221 | 1.200000e-17 | 102.0 |
33 | TraesCS3A01G112600 | chr4A | 95.833 | 48 | 2 | 0 | 1 | 48 | 735025684 | 735025731 | 2.030000e-10 | 78.7 |
34 | TraesCS3A01G112600 | chr4A | 87.302 | 63 | 5 | 3 | 1 | 63 | 691154740 | 691154681 | 1.220000e-07 | 69.4 |
35 | TraesCS3A01G112600 | chr6A | 91.329 | 173 | 13 | 2 | 6616 | 6787 | 540607155 | 540606984 | 1.140000e-57 | 235.0 |
36 | TraesCS3A01G112600 | chr6A | 91.860 | 86 | 4 | 1 | 2566 | 2648 | 39440961 | 39440876 | 4.300000e-22 | 117.0 |
37 | TraesCS3A01G112600 | chr6A | 92.593 | 81 | 3 | 1 | 2568 | 2645 | 39440875 | 39440955 | 5.560000e-21 | 113.0 |
38 | TraesCS3A01G112600 | chr6A | 88.462 | 78 | 6 | 3 | 3333 | 3410 | 581267243 | 581267169 | 2.610000e-14 | 91.6 |
39 | TraesCS3A01G112600 | chr6A | 88.462 | 78 | 6 | 3 | 3333 | 3410 | 581310480 | 581310406 | 2.610000e-14 | 91.6 |
40 | TraesCS3A01G112600 | chr6A | 90.909 | 55 | 3 | 2 | 1 | 54 | 231026090 | 231026143 | 9.440000e-09 | 73.1 |
41 | TraesCS3A01G112600 | chr6A | 94.737 | 38 | 2 | 0 | 6616 | 6653 | 596335890 | 596335853 | 7.350000e-05 | 60.2 |
42 | TraesCS3A01G112600 | chr7D | 90.857 | 175 | 12 | 4 | 6616 | 6787 | 69595090 | 69595263 | 1.470000e-56 | 231.0 |
43 | TraesCS3A01G112600 | chr7D | 92.453 | 159 | 3 | 2 | 2906 | 3064 | 35603161 | 35603310 | 1.150000e-52 | 219.0 |
44 | TraesCS3A01G112600 | chr7D | 85.714 | 175 | 14 | 9 | 6616 | 6787 | 170582440 | 170582274 | 2.520000e-39 | 174.0 |
45 | TraesCS3A01G112600 | chr7D | 83.803 | 142 | 22 | 1 | 1264 | 1405 | 197183727 | 197183587 | 4.270000e-27 | 134.0 |
46 | TraesCS3A01G112600 | chr7D | 88.679 | 53 | 4 | 1 | 1394 | 1446 | 501513308 | 501513358 | 5.680000e-06 | 63.9 |
47 | TraesCS3A01G112600 | chr6B | 90.173 | 173 | 13 | 4 | 6616 | 6787 | 590564507 | 590564338 | 8.860000e-54 | 222.0 |
48 | TraesCS3A01G112600 | chr6B | 93.069 | 101 | 5 | 2 | 3283 | 3383 | 553058980 | 553059078 | 5.490000e-31 | 147.0 |
49 | TraesCS3A01G112600 | chr6B | 87.850 | 107 | 11 | 2 | 6616 | 6721 | 565206030 | 565206135 | 2.570000e-24 | 124.0 |
50 | TraesCS3A01G112600 | chr6B | 91.176 | 68 | 5 | 1 | 2578 | 2645 | 151608224 | 151608290 | 2.610000e-14 | 91.6 |
51 | TraesCS3A01G112600 | chr1D | 88.199 | 161 | 19 | 0 | 2904 | 3064 | 103682854 | 103682694 | 6.950000e-45 | 193.0 |
52 | TraesCS3A01G112600 | chr1D | 86.957 | 161 | 21 | 0 | 2904 | 3064 | 283041385 | 283041225 | 1.500000e-41 | 182.0 |
53 | TraesCS3A01G112600 | chr1D | 82.653 | 98 | 4 | 3 | 2968 | 3064 | 392020141 | 392020226 | 2.630000e-09 | 75.0 |
54 | TraesCS3A01G112600 | chr7B | 87.195 | 164 | 21 | 0 | 2903 | 3066 | 228115214 | 228115051 | 3.230000e-43 | 187.0 |
55 | TraesCS3A01G112600 | chr7B | 95.745 | 94 | 3 | 1 | 3290 | 3383 | 64413008 | 64413100 | 4.240000e-32 | 150.0 |
56 | TraesCS3A01G112600 | chr7B | 82.883 | 111 | 13 | 4 | 3290 | 3398 | 695281415 | 695281309 | 2.020000e-15 | 95.3 |
57 | TraesCS3A01G112600 | chr7A | 87.500 | 168 | 14 | 7 | 6616 | 6780 | 173414353 | 173414190 | 3.230000e-43 | 187.0 |
58 | TraesCS3A01G112600 | chr7A | 87.578 | 161 | 20 | 0 | 2904 | 3064 | 466944559 | 466944399 | 3.230000e-43 | 187.0 |
59 | TraesCS3A01G112600 | chr7A | 78.462 | 130 | 22 | 5 | 5208 | 5335 | 66456365 | 66456240 | 5.640000e-11 | 80.5 |
60 | TraesCS3A01G112600 | chr7A | 91.071 | 56 | 3 | 2 | 1 | 55 | 42987543 | 42987597 | 2.630000e-09 | 75.0 |
61 | TraesCS3A01G112600 | chr5A | 88.050 | 159 | 16 | 3 | 6623 | 6780 | 613931108 | 613931264 | 1.160000e-42 | 185.0 |
62 | TraesCS3A01G112600 | chr5B | 86.747 | 166 | 14 | 6 | 6623 | 6787 | 606546831 | 606546989 | 1.950000e-40 | 178.0 |
63 | TraesCS3A01G112600 | chr5B | 81.283 | 187 | 30 | 3 | 5147 | 5331 | 625966889 | 625966706 | 5.490000e-31 | 147.0 |
64 | TraesCS3A01G112600 | chr5B | 100.000 | 29 | 0 | 0 | 5083 | 5111 | 634181294 | 634181322 | 3.000000e-03 | 54.7 |
65 | TraesCS3A01G112600 | chr4B | 93.333 | 105 | 4 | 1 | 3290 | 3391 | 544445377 | 544445273 | 1.180000e-32 | 152.0 |
66 | TraesCS3A01G112600 | chr5D | 81.283 | 187 | 30 | 3 | 5147 | 5331 | 502028900 | 502028717 | 5.490000e-31 | 147.0 |
67 | TraesCS3A01G112600 | chr5D | 93.000 | 100 | 5 | 2 | 3291 | 3390 | 134780599 | 134780502 | 1.970000e-30 | 145.0 |
68 | TraesCS3A01G112600 | chr5D | 93.814 | 97 | 5 | 1 | 3291 | 3386 | 491004698 | 491004602 | 1.970000e-30 | 145.0 |
69 | TraesCS3A01G112600 | chr5D | 87.719 | 114 | 7 | 6 | 3290 | 3399 | 491004601 | 491004711 | 7.150000e-25 | 126.0 |
70 | TraesCS3A01G112600 | chr5D | 83.099 | 71 | 9 | 3 | 5058 | 5125 | 423490602 | 423490672 | 2.040000e-05 | 62.1 |
71 | TraesCS3A01G112600 | chr5D | 100.000 | 31 | 0 | 0 | 5081 | 5111 | 504994664 | 504994694 | 2.640000e-04 | 58.4 |
72 | TraesCS3A01G112600 | chr1B | 94.681 | 94 | 4 | 1 | 3290 | 3383 | 26096835 | 26096927 | 1.970000e-30 | 145.0 |
73 | TraesCS3A01G112600 | chr1B | 94.118 | 68 | 2 | 2 | 3333 | 3398 | 541468092 | 541468025 | 1.200000e-17 | 102.0 |
74 | TraesCS3A01G112600 | chr1B | 85.333 | 75 | 6 | 5 | 1 | 70 | 674074400 | 674074326 | 9.440000e-09 | 73.1 |
75 | TraesCS3A01G112600 | chr2D | 85.606 | 132 | 19 | 0 | 5656 | 5787 | 291862434 | 291862565 | 9.180000e-29 | 139.0 |
76 | TraesCS3A01G112600 | chr2D | 88.750 | 80 | 4 | 4 | 2572 | 2646 | 181308287 | 181308366 | 7.250000e-15 | 93.5 |
77 | TraesCS3A01G112600 | chr2B | 85.606 | 132 | 19 | 0 | 5656 | 5787 | 368312223 | 368312354 | 9.180000e-29 | 139.0 |
78 | TraesCS3A01G112600 | chr2B | 92.405 | 79 | 4 | 2 | 2568 | 2645 | 357918917 | 357918840 | 2.000000e-20 | 111.0 |
79 | TraesCS3A01G112600 | chr2B | 88.095 | 84 | 6 | 2 | 2564 | 2645 | 357918832 | 357918913 | 5.600000e-16 | 97.1 |
80 | TraesCS3A01G112600 | chr2B | 100.000 | 29 | 0 | 0 | 5277 | 5305 | 798117778 | 798117806 | 3.000000e-03 | 54.7 |
81 | TraesCS3A01G112600 | chr2A | 85.606 | 132 | 19 | 0 | 5656 | 5787 | 367588030 | 367588161 | 9.180000e-29 | 139.0 |
82 | TraesCS3A01G112600 | chr2A | 85.577 | 104 | 10 | 3 | 3291 | 3389 | 748086308 | 748086411 | 3.350000e-18 | 104.0 |
83 | TraesCS3A01G112600 | chr1A | 91.346 | 104 | 4 | 3 | 3282 | 3383 | 572016727 | 572016827 | 3.300000e-28 | 137.0 |
84 | TraesCS3A01G112600 | chr1A | 92.593 | 54 | 3 | 1 | 1 | 53 | 303463304 | 303463251 | 7.300000e-10 | 76.8 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G112600 | chr3A | 80087571 | 80094357 | 6786 | False | 5956.000000 | 11064 | 100.000000 | 1 | 6787 | 2 | chr3A.!!$F3 | 6786 |
1 | TraesCS3A01G112600 | chr3B | 113913932 | 113920635 | 6703 | False | 1252.485714 | 4093 | 93.027143 | 37 | 6786 | 7 | chr3B.!!$F3 | 6749 |
2 | TraesCS3A01G112600 | chr3D | 68076018 | 68082230 | 6212 | True | 1275.428571 | 3986 | 93.075143 | 37 | 6787 | 7 | chr3D.!!$R2 | 6750 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
987 | 1001 | 0.521867 | CGAGCGAATTCCGTGTCGTA | 60.522 | 55.0 | 0.0 | 0.0 | 39.95 | 3.43 | F |
1061 | 1077 | 0.037697 | CTAGCTGTTGTGGCGGTGTA | 60.038 | 55.0 | 0.0 | 0.0 | 34.52 | 2.90 | F |
2962 | 3336 | 0.108520 | CCACCCGCTCTAACGCTTAA | 60.109 | 55.0 | 0.0 | 0.0 | 0.00 | 1.85 | F |
4400 | 4831 | 0.034186 | TCACCCATTAGCTTGCCCTG | 60.034 | 55.0 | 0.0 | 0.0 | 0.00 | 4.45 | F |
4604 | 5036 | 0.033228 | CAGCAGGGATTAGCGAGAGG | 59.967 | 60.0 | 0.0 | 0.0 | 35.48 | 3.69 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2943 | 3317 | 0.108520 | TTAAGCGTTAGAGCGGGTGG | 60.109 | 55.0 | 0.00 | 0.0 | 43.0 | 4.61 | R |
3033 | 3407 | 0.108804 | TCCCGCTTCAGACGCTTAAG | 60.109 | 55.0 | 0.00 | 0.0 | 0.0 | 1.85 | R |
4405 | 4836 | 0.034186 | CAGGGCAAGCTAATGGGTGA | 60.034 | 55.0 | 0.00 | 0.0 | 0.0 | 4.02 | R |
5372 | 5834 | 0.543410 | TAAAGGGGAGTCTGCCGTCA | 60.543 | 55.0 | 6.02 | 0.0 | 0.0 | 4.35 | R |
6439 | 7045 | 0.678048 | GAGGGTTGACATCACCAGGC | 60.678 | 60.0 | 0.00 | 0.0 | 0.0 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
26 | 27 | 9.015367 | TCCATTTTTATGACAAGTATTTTCGGA | 57.985 | 29.630 | 0.00 | 0.00 | 0.00 | 4.55 |
27 | 28 | 9.072294 | CCATTTTTATGACAAGTATTTTCGGAC | 57.928 | 33.333 | 0.00 | 0.00 | 0.00 | 4.79 |
28 | 29 | 8.785101 | CATTTTTATGACAAGTATTTTCGGACG | 58.215 | 33.333 | 0.00 | 0.00 | 0.00 | 4.79 |
29 | 30 | 6.411630 | TTTATGACAAGTATTTTCGGACGG | 57.588 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
30 | 31 | 3.663995 | TGACAAGTATTTTCGGACGGA | 57.336 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
31 | 32 | 3.581755 | TGACAAGTATTTTCGGACGGAG | 58.418 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
32 | 33 | 2.928116 | GACAAGTATTTTCGGACGGAGG | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
33 | 34 | 2.277084 | CAAGTATTTTCGGACGGAGGG | 58.723 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
34 | 35 | 1.856629 | AGTATTTTCGGACGGAGGGA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
35 | 36 | 1.755380 | AGTATTTTCGGACGGAGGGAG | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
71 | 72 | 8.088365 | TGACATATAACCTACTCCATTCATTCG | 58.912 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
227 | 234 | 1.948145 | CTTGGCATCCTTCTCAGCATC | 59.052 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
299 | 309 | 1.374252 | GCGTGAATCGACCAGTGGT | 60.374 | 57.895 | 16.70 | 16.70 | 42.86 | 4.16 |
368 | 380 | 1.353091 | CCCCCTTCTCTACATAGCCC | 58.647 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
815 | 829 | 1.525941 | GATTCGGTTCGTTTTGGGGA | 58.474 | 50.000 | 0.00 | 0.00 | 0.00 | 4.81 |
816 | 830 | 2.089201 | GATTCGGTTCGTTTTGGGGAT | 58.911 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
817 | 831 | 1.984066 | TTCGGTTCGTTTTGGGGATT | 58.016 | 45.000 | 0.00 | 0.00 | 0.00 | 3.01 |
921 | 935 | 4.643387 | GGGCACGAGCAGTTGGGT | 62.643 | 66.667 | 7.26 | 0.00 | 44.61 | 4.51 |
933 | 947 | 2.284405 | TTGGGTCGGAGGAGGGAC | 60.284 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
985 | 999 | 2.987593 | CGAGCGAATTCCGTGTCG | 59.012 | 61.111 | 0.00 | 5.19 | 41.15 | 4.35 |
986 | 1000 | 1.800315 | CGAGCGAATTCCGTGTCGT | 60.800 | 57.895 | 0.00 | 0.00 | 39.95 | 4.34 |
987 | 1001 | 0.521867 | CGAGCGAATTCCGTGTCGTA | 60.522 | 55.000 | 0.00 | 0.00 | 39.95 | 3.43 |
988 | 1002 | 1.189403 | GAGCGAATTCCGTGTCGTAG | 58.811 | 55.000 | 0.00 | 0.00 | 39.46 | 3.51 |
989 | 1003 | 0.806868 | AGCGAATTCCGTGTCGTAGA | 59.193 | 50.000 | 0.00 | 0.00 | 39.46 | 2.59 |
990 | 1004 | 1.404391 | AGCGAATTCCGTGTCGTAGAT | 59.596 | 47.619 | 0.00 | 0.00 | 39.00 | 1.98 |
992 | 1006 | 2.215812 | GCGAATTCCGTGTCGTAGATTC | 59.784 | 50.000 | 0.00 | 0.00 | 39.00 | 2.52 |
995 | 1011 | 4.503007 | CGAATTCCGTGTCGTAGATTCATT | 59.497 | 41.667 | 0.00 | 0.00 | 40.67 | 2.57 |
1021 | 1037 | 2.464865 | TGTTCGCGAAAATTTGGGTTG | 58.535 | 42.857 | 25.24 | 0.00 | 0.00 | 3.77 |
1025 | 1041 | 0.598942 | GCGAAAATTTGGGTTGGCGT | 60.599 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
1034 | 1050 | 0.607112 | TGGGTTGGCGTCGTTATGTA | 59.393 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
1048 | 1064 | 3.425525 | CGTTATGTATCGGTTGCTAGCTG | 59.574 | 47.826 | 17.23 | 3.43 | 0.00 | 4.24 |
1061 | 1077 | 0.037697 | CTAGCTGTTGTGGCGGTGTA | 60.038 | 55.000 | 0.00 | 0.00 | 34.52 | 2.90 |
1259 | 1275 | 3.560278 | GTTACATGGTCGCGCCGG | 61.560 | 66.667 | 0.00 | 0.00 | 41.21 | 6.13 |
1350 | 1366 | 1.456892 | TGACGATAGCCCGTGGGAT | 60.457 | 57.895 | 9.72 | 4.63 | 43.49 | 3.85 |
1388 | 1404 | 6.390721 | TCTAAGTGTAGTTGCTAGCTCTTTG | 58.609 | 40.000 | 17.23 | 9.46 | 0.00 | 2.77 |
1471 | 1487 | 6.042777 | TGAAATCTATCGTTTCTACCTGCAG | 58.957 | 40.000 | 6.78 | 6.78 | 36.71 | 4.41 |
1523 | 1542 | 3.553904 | TCATTTACATATGCTGCTGCCA | 58.446 | 40.909 | 13.47 | 1.12 | 38.71 | 4.92 |
1628 | 1650 | 4.099266 | GGCAGAACAAAATATGGCCATGTA | 59.901 | 41.667 | 29.04 | 9.94 | 39.66 | 2.29 |
1658 | 1682 | 7.544622 | TGTCACCTCAGTCAAATACATAGTAC | 58.455 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
1662 | 1686 | 6.895756 | ACCTCAGTCAAATACATAGTACCTCA | 59.104 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
1710 | 1734 | 6.496565 | ACAAATTGGAATTAACATGGACAGGA | 59.503 | 34.615 | 0.00 | 0.00 | 0.00 | 3.86 |
1752 | 1776 | 9.832445 | CCATATTCAAGTATGTAAAGTACCTGT | 57.168 | 33.333 | 0.00 | 0.00 | 31.55 | 4.00 |
1773 | 1797 | 7.444183 | ACCTGTTGATACCAATGATATAAACCG | 59.556 | 37.037 | 0.00 | 0.00 | 34.39 | 4.44 |
1856 | 1885 | 2.158957 | TCACTGTCGAGAGCAAAGGTTT | 60.159 | 45.455 | 9.90 | 0.00 | 0.00 | 3.27 |
1863 | 1892 | 5.179368 | TGTCGAGAGCAAAGGTTTAAATCAG | 59.821 | 40.000 | 0.43 | 0.00 | 0.00 | 2.90 |
1872 | 1901 | 6.791775 | GCAAAGGTTTAAATCAGAATTTTGCG | 59.208 | 34.615 | 15.21 | 0.00 | 38.64 | 4.85 |
1906 | 1935 | 2.286425 | CTCTGGGTGGGGGATGGT | 60.286 | 66.667 | 0.00 | 0.00 | 0.00 | 3.55 |
1989 | 2018 | 7.279981 | TCGTATCTGGTTCTGGTGAATTTAATG | 59.720 | 37.037 | 0.00 | 0.00 | 34.40 | 1.90 |
2148 | 2183 | 3.492102 | ATTGGGAGTTCGACATATGGG | 57.508 | 47.619 | 7.80 | 0.00 | 0.00 | 4.00 |
2175 | 2210 | 1.600107 | GCGAATCAGGGGTGTGGTA | 59.400 | 57.895 | 0.00 | 0.00 | 0.00 | 3.25 |
2228 | 2263 | 3.368248 | CCAACCAACCTCATGATGGATT | 58.632 | 45.455 | 18.64 | 7.92 | 37.66 | 3.01 |
2275 | 2310 | 0.322277 | CTGCTGTCCATGCACTCCTT | 60.322 | 55.000 | 0.00 | 0.00 | 36.37 | 3.36 |
2287 | 2322 | 1.536662 | ACTCCTTTCCTGAGGCCGT | 60.537 | 57.895 | 0.00 | 0.00 | 36.71 | 5.68 |
2302 | 2337 | 1.338769 | GGCCGTTGGAATAGTGTCTGT | 60.339 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
2311 | 2346 | 7.415318 | CGTTGGAATAGTGTCTGTCTACTGTAT | 60.415 | 40.741 | 0.00 | 0.00 | 0.00 | 2.29 |
2315 | 2350 | 9.339850 | GGAATAGTGTCTGTCTACTGTATTAGA | 57.660 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
2382 | 2417 | 8.188139 | GGAATATAAAACGACACAAATGACCAT | 58.812 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
2598 | 2633 | 3.007635 | CTCCGTCCCAAAATGTAAGACC | 58.992 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2765 | 3136 | 3.434641 | GCTTAACGACTAGGGTCCAAAAC | 59.565 | 47.826 | 0.00 | 0.00 | 39.15 | 2.43 |
2775 | 3146 | 4.724279 | AGGGTCCAAAACAATCTGTAGT | 57.276 | 40.909 | 0.00 | 0.00 | 0.00 | 2.73 |
2812 | 3183 | 3.056465 | AGAACCTTCCTCAACAGATCGAC | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
2861 | 3232 | 4.344102 | AGGTCAACTCAGTGCAGTAACTAA | 59.656 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2922 | 3296 | 9.162764 | CTTATATAGCATGGTTTATAAAGCGGT | 57.837 | 33.333 | 20.78 | 14.61 | 39.16 | 5.68 |
2925 | 3299 | 7.811117 | ATAGCATGGTTTATAAAGCGGTAAA | 57.189 | 32.000 | 19.50 | 8.04 | 39.16 | 2.01 |
2926 | 3300 | 6.131544 | AGCATGGTTTATAAAGCGGTAAAG | 57.868 | 37.500 | 19.50 | 8.73 | 39.16 | 1.85 |
2927 | 3301 | 4.738252 | GCATGGTTTATAAAGCGGTAAAGC | 59.262 | 41.667 | 19.50 | 13.39 | 39.16 | 3.51 |
2928 | 3302 | 4.603231 | TGGTTTATAAAGCGGTAAAGCG | 57.397 | 40.909 | 19.50 | 0.00 | 39.74 | 4.68 |
2929 | 3303 | 4.252073 | TGGTTTATAAAGCGGTAAAGCGA | 58.748 | 39.130 | 19.50 | 0.00 | 39.74 | 4.93 |
2930 | 3304 | 4.093261 | TGGTTTATAAAGCGGTAAAGCGAC | 59.907 | 41.667 | 19.50 | 0.00 | 39.74 | 5.19 |
2931 | 3305 | 4.494690 | GGTTTATAAAGCGGTAAAGCGACC | 60.495 | 45.833 | 11.36 | 0.00 | 43.00 | 4.79 |
2932 | 3306 | 2.685850 | ATAAAGCGGTAAAGCGACCT | 57.314 | 45.000 | 5.64 | 0.00 | 43.00 | 3.85 |
2933 | 3307 | 3.806625 | ATAAAGCGGTAAAGCGACCTA | 57.193 | 42.857 | 5.64 | 0.00 | 43.00 | 3.08 |
2934 | 3308 | 2.460757 | AAAGCGGTAAAGCGACCTAA | 57.539 | 45.000 | 5.64 | 0.00 | 43.00 | 2.69 |
2935 | 3309 | 2.460757 | AAGCGGTAAAGCGACCTAAA | 57.539 | 45.000 | 5.64 | 0.00 | 43.00 | 1.85 |
2936 | 3310 | 2.005971 | AGCGGTAAAGCGACCTAAAG | 57.994 | 50.000 | 5.64 | 0.00 | 43.00 | 1.85 |
2937 | 3311 | 0.372679 | GCGGTAAAGCGACCTAAAGC | 59.627 | 55.000 | 5.64 | 0.00 | 37.34 | 3.51 |
2938 | 3312 | 0.643820 | CGGTAAAGCGACCTAAAGCG | 59.356 | 55.000 | 0.00 | 0.00 | 37.34 | 4.68 |
2939 | 3313 | 1.733389 | CGGTAAAGCGACCTAAAGCGA | 60.733 | 52.381 | 0.00 | 0.00 | 37.34 | 4.93 |
2940 | 3314 | 1.925185 | GGTAAAGCGACCTAAAGCGAG | 59.075 | 52.381 | 0.00 | 0.00 | 36.47 | 5.03 |
2941 | 3315 | 1.323834 | GTAAAGCGACCTAAAGCGAGC | 59.676 | 52.381 | 0.00 | 0.00 | 38.61 | 5.03 |
2942 | 3316 | 0.320421 | AAAGCGACCTAAAGCGAGCA | 60.320 | 50.000 | 0.00 | 0.00 | 38.61 | 4.26 |
2943 | 3317 | 1.014564 | AAGCGACCTAAAGCGAGCAC | 61.015 | 55.000 | 0.00 | 0.00 | 38.61 | 4.40 |
2944 | 3318 | 2.453638 | GCGACCTAAAGCGAGCACC | 61.454 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
2945 | 3319 | 1.080093 | CGACCTAAAGCGAGCACCA | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 4.17 |
2946 | 3320 | 1.352156 | CGACCTAAAGCGAGCACCAC | 61.352 | 60.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2947 | 3321 | 1.003718 | ACCTAAAGCGAGCACCACC | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 4.61 |
2948 | 3322 | 1.745489 | CCTAAAGCGAGCACCACCC | 60.745 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
2949 | 3323 | 2.047655 | TAAAGCGAGCACCACCCG | 60.048 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
2956 | 3330 | 2.663196 | AGCACCACCCGCTCTAAC | 59.337 | 61.111 | 0.00 | 0.00 | 33.35 | 2.34 |
2957 | 3331 | 2.813908 | GCACCACCCGCTCTAACG | 60.814 | 66.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2958 | 3332 | 2.813908 | CACCACCCGCTCTAACGC | 60.814 | 66.667 | 0.00 | 0.00 | 0.00 | 4.84 |
2959 | 3333 | 2.995574 | ACCACCCGCTCTAACGCT | 60.996 | 61.111 | 0.00 | 0.00 | 0.00 | 5.07 |
2960 | 3334 | 2.264794 | CCACCCGCTCTAACGCTT | 59.735 | 61.111 | 0.00 | 0.00 | 0.00 | 4.68 |
2961 | 3335 | 1.252904 | ACCACCCGCTCTAACGCTTA | 61.253 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
2962 | 3336 | 0.108520 | CCACCCGCTCTAACGCTTAA | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2963 | 3337 | 1.278238 | CACCCGCTCTAACGCTTAAG | 58.722 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2964 | 3338 | 0.459759 | ACCCGCTCTAACGCTTAAGC | 60.460 | 55.000 | 17.83 | 17.83 | 37.78 | 3.09 |
2975 | 3349 | 1.636871 | GCTTAAGCGACGCCTAAGC | 59.363 | 57.895 | 34.59 | 34.59 | 46.44 | 3.09 |
2999 | 3373 | 5.613358 | CCTAAAGCGGGCAAATATCTAAG | 57.387 | 43.478 | 0.00 | 0.00 | 0.00 | 2.18 |
3000 | 3374 | 4.455877 | CCTAAAGCGGGCAAATATCTAAGG | 59.544 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
3001 | 3375 | 1.897560 | AGCGGGCAAATATCTAAGGC | 58.102 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3002 | 3376 | 0.517316 | GCGGGCAAATATCTAAGGCG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 5.52 |
3003 | 3377 | 0.517316 | CGGGCAAATATCTAAGGCGC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 6.53 |
3004 | 3378 | 1.878102 | CGGGCAAATATCTAAGGCGCT | 60.878 | 52.381 | 7.64 | 0.00 | 35.55 | 5.92 |
3005 | 3379 | 1.537202 | GGGCAAATATCTAAGGCGCTG | 59.463 | 52.381 | 7.64 | 0.00 | 34.95 | 5.18 |
3006 | 3380 | 1.068954 | GGCAAATATCTAAGGCGCTGC | 60.069 | 52.381 | 7.64 | 4.69 | 0.00 | 5.25 |
3043 | 3417 | 3.293311 | TTAAGCGACACTTAAGCGTCT | 57.707 | 42.857 | 18.77 | 5.78 | 44.21 | 4.18 |
3044 | 3418 | 1.419374 | AAGCGACACTTAAGCGTCTG | 58.581 | 50.000 | 18.77 | 13.79 | 36.62 | 3.51 |
3045 | 3419 | 0.596577 | AGCGACACTTAAGCGTCTGA | 59.403 | 50.000 | 18.77 | 0.00 | 35.78 | 3.27 |
3046 | 3420 | 1.000607 | AGCGACACTTAAGCGTCTGAA | 60.001 | 47.619 | 18.77 | 0.00 | 35.78 | 3.02 |
3047 | 3421 | 1.387084 | GCGACACTTAAGCGTCTGAAG | 59.613 | 52.381 | 18.77 | 6.90 | 0.00 | 3.02 |
3048 | 3422 | 1.387084 | CGACACTTAAGCGTCTGAAGC | 59.613 | 52.381 | 18.77 | 7.52 | 0.00 | 3.86 |
3049 | 3423 | 1.387084 | GACACTTAAGCGTCTGAAGCG | 59.613 | 52.381 | 14.96 | 0.00 | 40.04 | 4.68 |
3050 | 3424 | 0.716108 | CACTTAAGCGTCTGAAGCGG | 59.284 | 55.000 | 9.84 | 5.01 | 40.04 | 5.52 |
3051 | 3425 | 0.389948 | ACTTAAGCGTCTGAAGCGGG | 60.390 | 55.000 | 9.84 | 4.70 | 40.04 | 6.13 |
3052 | 3426 | 0.108804 | CTTAAGCGTCTGAAGCGGGA | 60.109 | 55.000 | 9.84 | 0.00 | 40.04 | 5.14 |
3053 | 3427 | 0.389426 | TTAAGCGTCTGAAGCGGGAC | 60.389 | 55.000 | 9.84 | 0.00 | 40.04 | 4.46 |
3148 | 3522 | 2.620585 | GAGCTGTATCCCATTTTCAGGC | 59.379 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3335 | 3720 | 8.905660 | ATAAGAGCGTTTAGATCACTACTAGA | 57.094 | 34.615 | 0.00 | 0.00 | 37.82 | 2.43 |
3336 | 3721 | 7.811117 | AAGAGCGTTTAGATCACTACTAGAT | 57.189 | 36.000 | 0.00 | 0.00 | 37.82 | 1.98 |
3337 | 3722 | 7.429636 | AGAGCGTTTAGATCACTACTAGATC | 57.570 | 40.000 | 0.00 | 0.00 | 41.68 | 2.75 |
3338 | 3723 | 6.993308 | AGAGCGTTTAGATCACTACTAGATCA | 59.007 | 38.462 | 0.00 | 0.00 | 43.35 | 2.92 |
3339 | 3724 | 6.961576 | AGCGTTTAGATCACTACTAGATCAC | 58.038 | 40.000 | 0.00 | 0.00 | 43.35 | 3.06 |
3340 | 3725 | 6.768861 | AGCGTTTAGATCACTACTAGATCACT | 59.231 | 38.462 | 0.00 | 0.00 | 43.35 | 3.41 |
3341 | 3726 | 7.932491 | AGCGTTTAGATCACTACTAGATCACTA | 59.068 | 37.037 | 0.00 | 0.00 | 43.35 | 2.74 |
3342 | 3727 | 8.011106 | GCGTTTAGATCACTACTAGATCACTAC | 58.989 | 40.741 | 0.00 | 0.62 | 43.35 | 2.73 |
3343 | 3728 | 9.263538 | CGTTTAGATCACTACTAGATCACTACT | 57.736 | 37.037 | 0.00 | 0.00 | 43.35 | 2.57 |
3417 | 3802 | 7.591006 | AAAATTAAGCTGTCATGCATTTCTG | 57.409 | 32.000 | 0.00 | 0.00 | 34.99 | 3.02 |
3761 | 4192 | 5.165911 | CATCGCTTATGCTGATGAAACTT | 57.834 | 39.130 | 20.43 | 0.00 | 44.65 | 2.66 |
3779 | 4210 | 7.758495 | TGAAACTTTCGCTTTCTTTTTACTCT | 58.242 | 30.769 | 0.00 | 0.00 | 0.00 | 3.24 |
3802 | 4233 | 5.288804 | TGCTGATAGAAAGCCAAAAACAAC | 58.711 | 37.500 | 0.00 | 0.00 | 40.06 | 3.32 |
3803 | 4234 | 5.068987 | TGCTGATAGAAAGCCAAAAACAACT | 59.931 | 36.000 | 0.00 | 0.00 | 40.06 | 3.16 |
3854 | 4285 | 4.811555 | TGTCATCGTGACCTTTTTCTTG | 57.188 | 40.909 | 13.24 | 0.00 | 46.40 | 3.02 |
4002 | 4433 | 8.844441 | TTATTTATAGTTTTATGCACCAACGC | 57.156 | 30.769 | 0.00 | 0.00 | 0.00 | 4.84 |
4019 | 4450 | 1.290955 | GCTTTGCAATGCCAGCTCA | 59.709 | 52.632 | 23.06 | 0.00 | 33.01 | 4.26 |
4108 | 4539 | 4.214971 | GCATGACATATTTGGGTAGCTCTG | 59.785 | 45.833 | 0.00 | 0.00 | 0.00 | 3.35 |
4256 | 4687 | 5.191722 | TCTTGTAGTAAATGCCTGGGATTCT | 59.808 | 40.000 | 14.12 | 10.17 | 0.00 | 2.40 |
4319 | 4750 | 6.892658 | AAGCTTGTTACAATTATGGACACA | 57.107 | 33.333 | 0.00 | 0.00 | 0.00 | 3.72 |
4335 | 4766 | 3.456277 | GGACACATGACCCTATCCTTTCT | 59.544 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
4336 | 4767 | 4.654262 | GGACACATGACCCTATCCTTTCTA | 59.346 | 45.833 | 0.00 | 0.00 | 0.00 | 2.10 |
4337 | 4768 | 5.130477 | GGACACATGACCCTATCCTTTCTAA | 59.870 | 44.000 | 0.00 | 0.00 | 0.00 | 2.10 |
4344 | 4775 | 9.799106 | CATGACCCTATCCTTTCTAATAATTGT | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
4390 | 4821 | 4.849310 | GCCGCCGCTCACCCATTA | 62.849 | 66.667 | 0.00 | 0.00 | 0.00 | 1.90 |
4391 | 4822 | 2.588877 | CCGCCGCTCACCCATTAG | 60.589 | 66.667 | 0.00 | 0.00 | 0.00 | 1.73 |
4392 | 4823 | 3.272334 | CGCCGCTCACCCATTAGC | 61.272 | 66.667 | 0.00 | 0.00 | 35.33 | 3.09 |
4393 | 4824 | 2.190578 | GCCGCTCACCCATTAGCT | 59.809 | 61.111 | 0.00 | 0.00 | 36.56 | 3.32 |
4394 | 4825 | 1.452108 | GCCGCTCACCCATTAGCTT | 60.452 | 57.895 | 0.00 | 0.00 | 36.56 | 3.74 |
4395 | 4826 | 1.718757 | GCCGCTCACCCATTAGCTTG | 61.719 | 60.000 | 0.00 | 0.00 | 36.56 | 4.01 |
4396 | 4827 | 1.718757 | CCGCTCACCCATTAGCTTGC | 61.719 | 60.000 | 0.00 | 0.00 | 36.56 | 4.01 |
4397 | 4828 | 1.718757 | CGCTCACCCATTAGCTTGCC | 61.719 | 60.000 | 0.00 | 0.00 | 36.56 | 4.52 |
4398 | 4829 | 1.387295 | GCTCACCCATTAGCTTGCCC | 61.387 | 60.000 | 0.00 | 0.00 | 35.80 | 5.36 |
4399 | 4830 | 0.257039 | CTCACCCATTAGCTTGCCCT | 59.743 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4400 | 4831 | 0.034186 | TCACCCATTAGCTTGCCCTG | 60.034 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4401 | 4832 | 1.380380 | ACCCATTAGCTTGCCCTGC | 60.380 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
4402 | 4833 | 1.076485 | CCCATTAGCTTGCCCTGCT | 60.076 | 57.895 | 0.00 | 0.00 | 43.79 | 4.24 |
4403 | 4834 | 1.389609 | CCCATTAGCTTGCCCTGCTG | 61.390 | 60.000 | 0.00 | 0.00 | 41.32 | 4.41 |
4404 | 4835 | 1.436336 | CATTAGCTTGCCCTGCTGC | 59.564 | 57.895 | 0.00 | 0.00 | 41.32 | 5.25 |
4405 | 4836 | 1.035932 | CATTAGCTTGCCCTGCTGCT | 61.036 | 55.000 | 0.00 | 10.69 | 41.32 | 4.24 |
4406 | 4837 | 0.750911 | ATTAGCTTGCCCTGCTGCTC | 60.751 | 55.000 | 0.00 | 0.00 | 41.32 | 4.26 |
4407 | 4838 | 2.128290 | TTAGCTTGCCCTGCTGCTCA | 62.128 | 55.000 | 0.00 | 0.00 | 41.32 | 4.26 |
4528 | 4959 | 0.105039 | ATAAGGCACTGACCTAGCGC | 59.895 | 55.000 | 0.00 | 0.00 | 39.93 | 5.92 |
4554 | 4985 | 4.638865 | TCGCTTGCTAAGTGATACACTCTA | 59.361 | 41.667 | 4.88 | 0.85 | 44.62 | 2.43 |
4604 | 5036 | 0.033228 | CAGCAGGGATTAGCGAGAGG | 59.967 | 60.000 | 0.00 | 0.00 | 35.48 | 3.69 |
4646 | 5078 | 6.905736 | TGGGTTATTACATGAGATAAAGGCA | 58.094 | 36.000 | 0.00 | 0.00 | 0.00 | 4.75 |
4687 | 5119 | 2.577563 | TCAAGAGGATGAGGGAATTGCA | 59.422 | 45.455 | 0.00 | 0.00 | 0.00 | 4.08 |
4691 | 5123 | 3.011032 | AGAGGATGAGGGAATTGCAACTT | 59.989 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
4693 | 5125 | 3.091545 | GGATGAGGGAATTGCAACTTCA | 58.908 | 45.455 | 0.00 | 1.60 | 0.00 | 3.02 |
4748 | 5180 | 3.184379 | CGGCTATCGTCAACCAACATATG | 59.816 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
4792 | 5232 | 2.158097 | TGCCCTTATCCCTCTGCTATCT | 60.158 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4902 | 5342 | 2.632377 | TCTTGCCTAATCGCCTTGAAG | 58.368 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
4905 | 5345 | 1.004277 | TGCCTAATCGCCTTGAAGGTT | 59.996 | 47.619 | 13.58 | 1.87 | 37.80 | 3.50 |
4911 | 5351 | 5.467063 | CCTAATCGCCTTGAAGGTTATTCTC | 59.533 | 44.000 | 13.58 | 0.00 | 37.80 | 2.87 |
5059 | 5507 | 3.065371 | AGACTTGAAAAAGCCTTGACACG | 59.935 | 43.478 | 0.00 | 0.00 | 0.00 | 4.49 |
5372 | 5834 | 2.613691 | GAAACCACGACGTACCATCAT | 58.386 | 47.619 | 0.00 | 0.00 | 0.00 | 2.45 |
5418 | 5880 | 4.477536 | AGAGATACTTGAGGCCTATGGA | 57.522 | 45.455 | 4.42 | 0.00 | 0.00 | 3.41 |
5429 | 5891 | 2.988859 | AGGCCTATGGATTTGATAGCCA | 59.011 | 45.455 | 1.29 | 0.00 | 35.91 | 4.75 |
5472 | 5938 | 5.128008 | GTCCCTCAGTTTACTTCTGCTATCT | 59.872 | 44.000 | 0.00 | 0.00 | 33.48 | 1.98 |
5478 | 5944 | 5.871524 | CAGTTTACTTCTGCTATCTTGCTCA | 59.128 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5499 | 5965 | 7.040478 | TGCTCATTCAACATATTAATGGCCTAC | 60.040 | 37.037 | 3.32 | 0.00 | 37.43 | 3.18 |
5500 | 5966 | 7.040478 | GCTCATTCAACATATTAATGGCCTACA | 60.040 | 37.037 | 3.32 | 0.00 | 37.43 | 2.74 |
5534 | 6000 | 8.478775 | TCTCTCTATAGCCTATGCAAGTTTTA | 57.521 | 34.615 | 0.00 | 0.00 | 41.13 | 1.52 |
5537 | 6003 | 9.547753 | TCTCTATAGCCTATGCAAGTTTTAAAG | 57.452 | 33.333 | 0.00 | 0.00 | 41.13 | 1.85 |
5561 | 6029 | 6.874134 | AGTGTGAGTGATATTACACAGAAACC | 59.126 | 38.462 | 8.77 | 0.00 | 44.30 | 3.27 |
5576 | 6044 | 2.792749 | GAAACCGTGTTGTGTTTCCAG | 58.207 | 47.619 | 4.24 | 0.00 | 42.75 | 3.86 |
5587 | 6055 | 2.158769 | TGTGTTTCCAGTCACTCTGCAT | 60.159 | 45.455 | 0.00 | 0.00 | 42.38 | 3.96 |
5588 | 6056 | 2.225019 | GTGTTTCCAGTCACTCTGCATG | 59.775 | 50.000 | 0.00 | 0.00 | 42.38 | 4.06 |
5681 | 6149 | 1.278985 | CTGCTGTGTGATCCTAACCCA | 59.721 | 52.381 | 0.00 | 0.00 | 0.00 | 4.51 |
5858 | 6326 | 9.391006 | TGTTTGTAACTAAAATGACTGAACTCT | 57.609 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
5939 | 6407 | 1.002868 | GCTCTGTCATGGCCTGTGT | 60.003 | 57.895 | 3.32 | 0.00 | 0.00 | 3.72 |
5943 | 6411 | 1.550524 | TCTGTCATGGCCTGTGTCTAC | 59.449 | 52.381 | 3.32 | 0.00 | 0.00 | 2.59 |
5962 | 6430 | 3.577649 | ACACTGTCTGTATCTGGAACG | 57.422 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
5988 | 6456 | 5.804692 | ACATTTTGTAACGTCTTGTGTGA | 57.195 | 34.783 | 0.00 | 0.00 | 0.00 | 3.58 |
6077 | 6548 | 9.057089 | AGTTGAATGGTGTAGAAGTTCTAAAAG | 57.943 | 33.333 | 14.20 | 0.00 | 29.58 | 2.27 |
6185 | 6662 | 8.938906 | TCCGTAATAAGTTGAACACTAATTTCC | 58.061 | 33.333 | 0.00 | 0.00 | 32.94 | 3.13 |
6204 | 6681 | 3.884895 | TCCATGTGGCTATAGTTGGTTG | 58.115 | 45.455 | 0.84 | 0.00 | 34.44 | 3.77 |
6212 | 6689 | 5.122396 | GTGGCTATAGTTGGTTGAGTTGAAG | 59.878 | 44.000 | 0.84 | 0.00 | 0.00 | 3.02 |
6221 | 6698 | 3.149196 | GGTTGAGTTGAAGCAAGGATGA | 58.851 | 45.455 | 0.00 | 0.00 | 0.00 | 2.92 |
6241 | 6718 | 8.076178 | AGGATGAACAAGAAATTTGTTTAGTCG | 58.924 | 33.333 | 6.71 | 0.00 | 42.11 | 4.18 |
6242 | 6719 | 7.860872 | GGATGAACAAGAAATTTGTTTAGTCGT | 59.139 | 33.333 | 6.71 | 0.00 | 42.11 | 4.34 |
6253 | 6732 | 4.585955 | TGTTTAGTCGTCTGAGCTTCTT | 57.414 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
6255 | 6734 | 4.745125 | TGTTTAGTCGTCTGAGCTTCTTTG | 59.255 | 41.667 | 0.00 | 0.00 | 0.00 | 2.77 |
6341 | 6945 | 4.469657 | ACAATGCCCTTAACAAAGAGTCA | 58.530 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
6393 | 6999 | 0.465460 | TTTGGAAGAGTTGCTGCCGT | 60.465 | 50.000 | 0.00 | 0.00 | 46.61 | 5.68 |
6410 | 7016 | 1.336517 | CCGTGAAAGTCGGCAGAAGTA | 60.337 | 52.381 | 0.00 | 0.00 | 41.48 | 2.24 |
6413 | 7019 | 3.391049 | GTGAAAGTCGGCAGAAGTACTT | 58.609 | 45.455 | 8.13 | 8.13 | 33.72 | 2.24 |
6414 | 7020 | 3.184581 | GTGAAAGTCGGCAGAAGTACTTG | 59.815 | 47.826 | 14.14 | 0.84 | 32.69 | 3.16 |
6459 | 7065 | 0.035056 | CCTGGTGATGTCAACCCTCC | 60.035 | 60.000 | 0.00 | 0.00 | 31.06 | 4.30 |
6469 | 7075 | 0.620556 | TCAACCCTCCTCATTGCTCC | 59.379 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
6470 | 7076 | 0.745845 | CAACCCTCCTCATTGCTCCG | 60.746 | 60.000 | 0.00 | 0.00 | 0.00 | 4.63 |
6471 | 7077 | 1.201429 | AACCCTCCTCATTGCTCCGT | 61.201 | 55.000 | 0.00 | 0.00 | 0.00 | 4.69 |
6472 | 7078 | 1.144936 | CCCTCCTCATTGCTCCGTC | 59.855 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
6528 | 7134 | 5.394115 | CCTTATTGCACTAACATTTCACCCC | 60.394 | 44.000 | 0.00 | 0.00 | 0.00 | 4.95 |
6567 | 7173 | 6.153170 | ACCTGAAAATATGTGTCATGCATGAA | 59.847 | 34.615 | 30.24 | 16.19 | 38.75 | 2.57 |
6669 | 7275 | 6.619801 | ACACCTGATAGCCGATTTTATTTC | 57.380 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
6714 | 7322 | 7.667635 | TCAAAACTTCCAAAACTTTTTCCCAAT | 59.332 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
6742 | 7350 | 1.335810 | AGCTGTCGTTTCTGTCGTACA | 59.664 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 9.015367 | TCCGAAAATACTTGTCATAAAAATGGA | 57.985 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
1 | 2 | 9.072294 | GTCCGAAAATACTTGTCATAAAAATGG | 57.928 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2 | 3 | 8.785101 | CGTCCGAAAATACTTGTCATAAAAATG | 58.215 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3 | 4 | 7.966204 | CCGTCCGAAAATACTTGTCATAAAAAT | 59.034 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
4 | 5 | 7.172875 | TCCGTCCGAAAATACTTGTCATAAAAA | 59.827 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
5 | 6 | 6.649973 | TCCGTCCGAAAATACTTGTCATAAAA | 59.350 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
6 | 7 | 6.164876 | TCCGTCCGAAAATACTTGTCATAAA | 58.835 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
7 | 8 | 5.722263 | TCCGTCCGAAAATACTTGTCATAA | 58.278 | 37.500 | 0.00 | 0.00 | 0.00 | 1.90 |
8 | 9 | 5.327616 | TCCGTCCGAAAATACTTGTCATA | 57.672 | 39.130 | 0.00 | 0.00 | 0.00 | 2.15 |
9 | 10 | 4.181578 | CTCCGTCCGAAAATACTTGTCAT | 58.818 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
10 | 11 | 3.581755 | CTCCGTCCGAAAATACTTGTCA | 58.418 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
11 | 12 | 2.928116 | CCTCCGTCCGAAAATACTTGTC | 59.072 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
12 | 13 | 2.354403 | CCCTCCGTCCGAAAATACTTGT | 60.354 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
13 | 14 | 2.093869 | TCCCTCCGTCCGAAAATACTTG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
14 | 15 | 2.167900 | CTCCCTCCGTCCGAAAATACTT | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
15 | 16 | 1.755380 | CTCCCTCCGTCCGAAAATACT | 59.245 | 52.381 | 0.00 | 0.00 | 0.00 | 2.12 |
16 | 17 | 1.479730 | ACTCCCTCCGTCCGAAAATAC | 59.520 | 52.381 | 0.00 | 0.00 | 0.00 | 1.89 |
17 | 18 | 1.856629 | ACTCCCTCCGTCCGAAAATA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
18 | 19 | 1.856629 | TACTCCCTCCGTCCGAAAAT | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
19 | 20 | 1.856629 | ATACTCCCTCCGTCCGAAAA | 58.143 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
20 | 21 | 2.734755 | TATACTCCCTCCGTCCGAAA | 57.265 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
21 | 22 | 2.965671 | ATATACTCCCTCCGTCCGAA | 57.034 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
22 | 23 | 2.965671 | AATATACTCCCTCCGTCCGA | 57.034 | 50.000 | 0.00 | 0.00 | 0.00 | 4.55 |
23 | 24 | 5.184479 | TCATAAAATATACTCCCTCCGTCCG | 59.816 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
24 | 25 | 6.014840 | TGTCATAAAATATACTCCCTCCGTCC | 60.015 | 42.308 | 0.00 | 0.00 | 0.00 | 4.79 |
25 | 26 | 6.989659 | TGTCATAAAATATACTCCCTCCGTC | 58.010 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
26 | 27 | 6.989155 | TGTCATAAAATATACTCCCTCCGT | 57.011 | 37.500 | 0.00 | 0.00 | 0.00 | 4.69 |
178 | 182 | 7.807977 | AATATCGCACAAAATCATACTCCTT | 57.192 | 32.000 | 0.00 | 0.00 | 0.00 | 3.36 |
299 | 309 | 0.392706 | AGTCAGCGATGACAACACCA | 59.607 | 50.000 | 32.88 | 0.00 | 41.02 | 4.17 |
822 | 836 | 3.251245 | CGAATCGAGAGCTCTAGCCTAAA | 59.749 | 47.826 | 18.25 | 0.00 | 43.38 | 1.85 |
920 | 934 | 0.179108 | CAAATCGTCCCTCCTCCGAC | 60.179 | 60.000 | 0.00 | 0.00 | 32.86 | 4.79 |
921 | 935 | 0.323999 | TCAAATCGTCCCTCCTCCGA | 60.324 | 55.000 | 0.00 | 0.00 | 34.79 | 4.55 |
933 | 947 | 2.697425 | CGTGCTCGGCTCAAATCG | 59.303 | 61.111 | 0.00 | 0.00 | 0.00 | 3.34 |
985 | 999 | 4.606232 | CGCGAACATCGGAAATGAATCTAC | 60.606 | 45.833 | 0.00 | 0.00 | 40.84 | 2.59 |
986 | 1000 | 3.489416 | CGCGAACATCGGAAATGAATCTA | 59.511 | 43.478 | 0.00 | 0.00 | 40.84 | 1.98 |
987 | 1001 | 2.285220 | CGCGAACATCGGAAATGAATCT | 59.715 | 45.455 | 0.00 | 0.00 | 40.84 | 2.40 |
988 | 1002 | 2.284150 | TCGCGAACATCGGAAATGAATC | 59.716 | 45.455 | 6.20 | 0.00 | 40.84 | 2.52 |
989 | 1003 | 2.276201 | TCGCGAACATCGGAAATGAAT | 58.724 | 42.857 | 6.20 | 0.00 | 40.84 | 2.57 |
990 | 1004 | 1.715993 | TCGCGAACATCGGAAATGAA | 58.284 | 45.000 | 6.20 | 0.00 | 40.84 | 2.57 |
992 | 1006 | 2.519002 | TTTCGCGAACATCGGAAATG | 57.481 | 45.000 | 23.33 | 0.00 | 40.84 | 2.32 |
995 | 1011 | 3.230355 | CAAATTTTCGCGAACATCGGAA | 58.770 | 40.909 | 23.33 | 12.59 | 40.84 | 4.30 |
1021 | 1037 | 1.519758 | CAACCGATACATAACGACGCC | 59.480 | 52.381 | 0.00 | 0.00 | 0.00 | 5.68 |
1025 | 1041 | 3.317149 | AGCTAGCAACCGATACATAACGA | 59.683 | 43.478 | 18.83 | 0.00 | 0.00 | 3.85 |
1034 | 1050 | 1.442769 | CACAACAGCTAGCAACCGAT | 58.557 | 50.000 | 18.83 | 0.00 | 0.00 | 4.18 |
1048 | 1064 | 0.531090 | TGTGAGTACACCGCCACAAC | 60.531 | 55.000 | 0.00 | 0.00 | 45.40 | 3.32 |
1079 | 1095 | 3.254060 | TCCTCGAAATTCTCTGCGAAAG | 58.746 | 45.455 | 0.00 | 0.00 | 34.79 | 2.62 |
1259 | 1275 | 4.281941 | ACATTGAAGAGGAAAAGAAAGGGC | 59.718 | 41.667 | 0.00 | 0.00 | 0.00 | 5.19 |
1350 | 1366 | 6.952358 | ACTACACTTAGATCAACTAACCTCCA | 59.048 | 38.462 | 0.00 | 0.00 | 36.33 | 3.86 |
1388 | 1404 | 6.545298 | AGCAAGGAAATTCTAGGACATCATTC | 59.455 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
1471 | 1487 | 3.433615 | GCTTACACACATGAGACCTCAAC | 59.566 | 47.826 | 0.00 | 0.00 | 43.58 | 3.18 |
1523 | 1542 | 5.996644 | TGGTATTAATCTTCCGTCACCAAT | 58.003 | 37.500 | 0.00 | 0.00 | 32.10 | 3.16 |
1628 | 1650 | 6.119536 | TGTATTTGACTGAGGTGACAAGTTT | 58.880 | 36.000 | 0.00 | 0.00 | 30.54 | 2.66 |
1658 | 1682 | 1.066002 | CCACTGTGTTTGCTTGTGAGG | 59.934 | 52.381 | 7.08 | 0.00 | 0.00 | 3.86 |
1662 | 1686 | 4.400884 | TGATTTACCACTGTGTTTGCTTGT | 59.599 | 37.500 | 7.08 | 0.00 | 0.00 | 3.16 |
1702 | 1726 | 4.007581 | TGAGGGATATTTCTCCTGTCCA | 57.992 | 45.455 | 0.00 | 0.00 | 35.50 | 4.02 |
1710 | 1734 | 9.750783 | CTTGAATATGGAATGAGGGATATTTCT | 57.249 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1789 | 1818 | 7.041107 | CCAATTTCGAAATGGTGGTGATATTT | 58.959 | 34.615 | 24.42 | 6.19 | 0.00 | 1.40 |
1790 | 1819 | 6.154363 | ACCAATTTCGAAATGGTGGTGATATT | 59.846 | 34.615 | 32.10 | 15.97 | 37.83 | 1.28 |
1792 | 1821 | 5.013547 | ACCAATTTCGAAATGGTGGTGATA | 58.986 | 37.500 | 32.10 | 3.71 | 37.83 | 2.15 |
1793 | 1822 | 3.831911 | ACCAATTTCGAAATGGTGGTGAT | 59.168 | 39.130 | 32.10 | 17.05 | 37.83 | 3.06 |
1794 | 1823 | 3.226777 | ACCAATTTCGAAATGGTGGTGA | 58.773 | 40.909 | 32.10 | 4.87 | 37.83 | 4.02 |
1795 | 1824 | 3.316283 | CACCAATTTCGAAATGGTGGTG | 58.684 | 45.455 | 36.65 | 36.65 | 44.39 | 4.17 |
1796 | 1825 | 2.288763 | GCACCAATTTCGAAATGGTGGT | 60.289 | 45.455 | 38.34 | 34.58 | 41.96 | 4.16 |
1797 | 1826 | 2.288702 | TGCACCAATTTCGAAATGGTGG | 60.289 | 45.455 | 38.34 | 34.15 | 41.96 | 4.61 |
1798 | 1827 | 3.023946 | TGCACCAATTTCGAAATGGTG | 57.976 | 42.857 | 36.64 | 36.64 | 43.10 | 4.17 |
1799 | 1828 | 3.742433 | TTGCACCAATTTCGAAATGGT | 57.258 | 38.095 | 26.07 | 26.07 | 33.24 | 3.55 |
1856 | 1885 | 4.493547 | CCTTGGCGCAAAATTCTGATTTA | 58.506 | 39.130 | 10.83 | 0.00 | 34.44 | 1.40 |
1863 | 1892 | 2.001872 | CATTCCCTTGGCGCAAAATTC | 58.998 | 47.619 | 10.83 | 0.00 | 0.00 | 2.17 |
1872 | 1901 | 1.139853 | AGAGACGATCATTCCCTTGGC | 59.860 | 52.381 | 0.00 | 0.00 | 0.00 | 4.52 |
1906 | 1935 | 1.295357 | CTTAATCACACGCGCCACCA | 61.295 | 55.000 | 5.73 | 0.00 | 0.00 | 4.17 |
2005 | 2034 | 0.532573 | ACCTCATTCGTCTGCATCGT | 59.467 | 50.000 | 10.37 | 0.00 | 0.00 | 3.73 |
2097 | 2132 | 4.630505 | CAGGAGATATGCAGATTGGAATCG | 59.369 | 45.833 | 0.00 | 0.00 | 40.35 | 3.34 |
2148 | 2183 | 1.233019 | CCCTGATTCGCCACATCATC | 58.767 | 55.000 | 0.00 | 0.00 | 30.15 | 2.92 |
2175 | 2210 | 1.953559 | CATCCCCATTTCGATGTCGT | 58.046 | 50.000 | 2.04 | 0.00 | 40.80 | 4.34 |
2228 | 2263 | 4.647611 | ACGACAAAATACAACATCAGGGA | 58.352 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
2275 | 2310 | 1.209504 | CTATTCCAACGGCCTCAGGAA | 59.790 | 52.381 | 18.25 | 18.25 | 43.63 | 3.36 |
2287 | 2322 | 7.956328 | ATACAGTAGACAGACACTATTCCAA | 57.044 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2382 | 2417 | 8.303876 | GGCATTTATTCTGAAGAAAACAGGTTA | 58.696 | 33.333 | 13.44 | 0.00 | 37.61 | 2.85 |
2406 | 2441 | 7.980099 | ACATGTCTAAGTAGTTAAGTACATGGC | 59.020 | 37.037 | 25.51 | 12.09 | 44.44 | 4.40 |
2650 | 3021 | 8.117813 | AGCTAGCCATAACTCTTCTATTCTAC | 57.882 | 38.462 | 12.13 | 0.00 | 0.00 | 2.59 |
2775 | 3146 | 7.076446 | AGGAAGGTTCTAAATAGCTATCTGGA | 58.924 | 38.462 | 6.72 | 0.00 | 0.00 | 3.86 |
2861 | 3232 | 5.221106 | GCCATACAAATAGTGCATGTGATGT | 60.221 | 40.000 | 0.12 | 2.01 | 29.94 | 3.06 |
2902 | 3276 | 6.238538 | GCTTTACCGCTTTATAAACCATGCTA | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 3.49 |
2903 | 3277 | 5.449999 | GCTTTACCGCTTTATAAACCATGCT | 60.450 | 40.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2904 | 3278 | 4.738252 | GCTTTACCGCTTTATAAACCATGC | 59.262 | 41.667 | 0.00 | 0.00 | 0.00 | 4.06 |
2905 | 3279 | 4.967575 | CGCTTTACCGCTTTATAAACCATG | 59.032 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
2906 | 3280 | 4.877251 | TCGCTTTACCGCTTTATAAACCAT | 59.123 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
2907 | 3281 | 4.093261 | GTCGCTTTACCGCTTTATAAACCA | 59.907 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
2908 | 3282 | 4.494690 | GGTCGCTTTACCGCTTTATAAACC | 60.495 | 45.833 | 0.00 | 0.00 | 0.00 | 3.27 |
2909 | 3283 | 4.330894 | AGGTCGCTTTACCGCTTTATAAAC | 59.669 | 41.667 | 0.00 | 0.00 | 44.77 | 2.01 |
2910 | 3284 | 4.506758 | AGGTCGCTTTACCGCTTTATAAA | 58.493 | 39.130 | 0.00 | 0.00 | 44.77 | 1.40 |
2911 | 3285 | 4.127566 | AGGTCGCTTTACCGCTTTATAA | 57.872 | 40.909 | 0.00 | 0.00 | 44.77 | 0.98 |
2912 | 3286 | 3.806625 | AGGTCGCTTTACCGCTTTATA | 57.193 | 42.857 | 0.00 | 0.00 | 44.77 | 0.98 |
2913 | 3287 | 2.685850 | AGGTCGCTTTACCGCTTTAT | 57.314 | 45.000 | 0.00 | 0.00 | 44.77 | 1.40 |
2914 | 3288 | 3.591196 | TTAGGTCGCTTTACCGCTTTA | 57.409 | 42.857 | 0.00 | 0.00 | 44.77 | 1.85 |
2915 | 3289 | 2.460757 | TTAGGTCGCTTTACCGCTTT | 57.539 | 45.000 | 0.00 | 0.00 | 44.77 | 3.51 |
2916 | 3290 | 2.344025 | CTTTAGGTCGCTTTACCGCTT | 58.656 | 47.619 | 0.00 | 0.00 | 44.77 | 4.68 |
2917 | 3291 | 2.005560 | GCTTTAGGTCGCTTTACCGCT | 61.006 | 52.381 | 0.00 | 0.00 | 44.77 | 5.52 |
2918 | 3292 | 0.372679 | GCTTTAGGTCGCTTTACCGC | 59.627 | 55.000 | 0.00 | 0.00 | 44.77 | 5.68 |
2919 | 3293 | 0.643820 | CGCTTTAGGTCGCTTTACCG | 59.356 | 55.000 | 0.00 | 0.00 | 44.77 | 4.02 |
2920 | 3294 | 1.925185 | CTCGCTTTAGGTCGCTTTACC | 59.075 | 52.381 | 0.00 | 0.00 | 40.06 | 2.85 |
2921 | 3295 | 1.323834 | GCTCGCTTTAGGTCGCTTTAC | 59.676 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
2922 | 3296 | 1.067425 | TGCTCGCTTTAGGTCGCTTTA | 60.067 | 47.619 | 0.00 | 0.00 | 0.00 | 1.85 |
2923 | 3297 | 0.320421 | TGCTCGCTTTAGGTCGCTTT | 60.320 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2924 | 3298 | 1.014564 | GTGCTCGCTTTAGGTCGCTT | 61.015 | 55.000 | 0.00 | 0.00 | 0.00 | 4.68 |
2925 | 3299 | 1.446272 | GTGCTCGCTTTAGGTCGCT | 60.446 | 57.895 | 0.00 | 0.00 | 0.00 | 4.93 |
2926 | 3300 | 2.453638 | GGTGCTCGCTTTAGGTCGC | 61.454 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
2927 | 3301 | 1.080093 | TGGTGCTCGCTTTAGGTCG | 60.080 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
2928 | 3302 | 1.019805 | GGTGGTGCTCGCTTTAGGTC | 61.020 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2929 | 3303 | 1.003718 | GGTGGTGCTCGCTTTAGGT | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 3.08 |
2930 | 3304 | 1.745489 | GGGTGGTGCTCGCTTTAGG | 60.745 | 63.158 | 0.00 | 0.00 | 0.00 | 2.69 |
2931 | 3305 | 2.100631 | CGGGTGGTGCTCGCTTTAG | 61.101 | 63.158 | 0.00 | 0.00 | 32.68 | 1.85 |
2932 | 3306 | 2.047655 | CGGGTGGTGCTCGCTTTA | 60.048 | 61.111 | 0.00 | 0.00 | 32.68 | 1.85 |
2940 | 3314 | 2.813908 | CGTTAGAGCGGGTGGTGC | 60.814 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
2941 | 3315 | 2.781595 | AAGCGTTAGAGCGGGTGGTG | 62.782 | 60.000 | 0.00 | 0.00 | 43.00 | 4.17 |
2942 | 3316 | 1.252904 | TAAGCGTTAGAGCGGGTGGT | 61.253 | 55.000 | 0.00 | 0.00 | 43.00 | 4.16 |
2943 | 3317 | 0.108520 | TTAAGCGTTAGAGCGGGTGG | 60.109 | 55.000 | 0.00 | 0.00 | 43.00 | 4.61 |
2944 | 3318 | 1.278238 | CTTAAGCGTTAGAGCGGGTG | 58.722 | 55.000 | 0.00 | 0.00 | 43.00 | 4.61 |
2945 | 3319 | 0.459759 | GCTTAAGCGTTAGAGCGGGT | 60.460 | 55.000 | 12.53 | 0.00 | 43.00 | 5.28 |
2946 | 3320 | 2.298593 | GCTTAAGCGTTAGAGCGGG | 58.701 | 57.895 | 12.53 | 0.00 | 43.00 | 6.13 |
2977 | 3351 | 4.455877 | CCTTAGATATTTGCCCGCTTTAGG | 59.544 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
2978 | 3352 | 4.083271 | GCCTTAGATATTTGCCCGCTTTAG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
2979 | 3353 | 3.818773 | GCCTTAGATATTTGCCCGCTTTA | 59.181 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
2980 | 3354 | 2.623416 | GCCTTAGATATTTGCCCGCTTT | 59.377 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2981 | 3355 | 2.230660 | GCCTTAGATATTTGCCCGCTT | 58.769 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
2982 | 3356 | 1.878102 | CGCCTTAGATATTTGCCCGCT | 60.878 | 52.381 | 0.00 | 0.00 | 0.00 | 5.52 |
2983 | 3357 | 0.517316 | CGCCTTAGATATTTGCCCGC | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2984 | 3358 | 0.517316 | GCGCCTTAGATATTTGCCCG | 59.483 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
2985 | 3359 | 1.537202 | CAGCGCCTTAGATATTTGCCC | 59.463 | 52.381 | 2.29 | 0.00 | 0.00 | 5.36 |
2986 | 3360 | 1.068954 | GCAGCGCCTTAGATATTTGCC | 60.069 | 52.381 | 2.29 | 0.00 | 0.00 | 4.52 |
2987 | 3361 | 1.068954 | GGCAGCGCCTTAGATATTTGC | 60.069 | 52.381 | 2.29 | 2.54 | 46.69 | 3.68 |
2988 | 3362 | 2.977405 | GGCAGCGCCTTAGATATTTG | 57.023 | 50.000 | 2.29 | 0.00 | 46.69 | 2.32 |
3030 | 3404 | 1.419374 | CGCTTCAGACGCTTAAGTGT | 58.581 | 50.000 | 21.27 | 21.27 | 42.13 | 3.55 |
3031 | 3405 | 0.716108 | CCGCTTCAGACGCTTAAGTG | 59.284 | 55.000 | 14.47 | 14.47 | 0.00 | 3.16 |
3032 | 3406 | 0.389948 | CCCGCTTCAGACGCTTAAGT | 60.390 | 55.000 | 4.02 | 0.00 | 0.00 | 2.24 |
3033 | 3407 | 0.108804 | TCCCGCTTCAGACGCTTAAG | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3034 | 3408 | 0.389426 | GTCCCGCTTCAGACGCTTAA | 60.389 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3035 | 3409 | 1.214589 | GTCCCGCTTCAGACGCTTA | 59.785 | 57.895 | 0.00 | 0.00 | 0.00 | 3.09 |
3036 | 3410 | 2.048127 | GTCCCGCTTCAGACGCTT | 60.048 | 61.111 | 0.00 | 0.00 | 0.00 | 4.68 |
3048 | 3422 | 6.257193 | GGATACCATATTTATAAAGCGTCCCG | 59.743 | 42.308 | 3.94 | 0.00 | 0.00 | 5.14 |
3049 | 3423 | 7.549615 | GGATACCATATTTATAAAGCGTCCC | 57.450 | 40.000 | 3.94 | 0.32 | 0.00 | 4.46 |
3148 | 3522 | 2.989840 | CTGGAGAGTCAGCTTAAACGTG | 59.010 | 50.000 | 0.00 | 0.00 | 0.00 | 4.49 |
3357 | 3742 | 6.325545 | TCCCTCCGTAAAGAAATATAAGAGCA | 59.674 | 38.462 | 0.00 | 0.00 | 0.00 | 4.26 |
3399 | 3784 | 3.064958 | CGATCAGAAATGCATGACAGCTT | 59.935 | 43.478 | 0.00 | 0.00 | 34.99 | 3.74 |
3403 | 3788 | 4.937015 | TCTTTCGATCAGAAATGCATGACA | 59.063 | 37.500 | 0.00 | 0.00 | 46.60 | 3.58 |
3417 | 3802 | 4.800993 | ACGTGACAGATCAATCTTTCGATC | 59.199 | 41.667 | 0.00 | 0.00 | 36.62 | 3.69 |
3515 | 3938 | 5.646360 | GCAAACAAAGTAAGTAGGCTCCATA | 59.354 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3530 | 3953 | 5.067805 | ACAAGAGAACTAAGGGCAAACAAAG | 59.932 | 40.000 | 0.00 | 0.00 | 0.00 | 2.77 |
3761 | 4192 | 4.814234 | TCAGCAGAGTAAAAAGAAAGCGAA | 59.186 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
3779 | 4210 | 5.068987 | AGTTGTTTTTGGCTTTCTATCAGCA | 59.931 | 36.000 | 0.00 | 0.00 | 39.21 | 4.41 |
3802 | 4233 | 7.633193 | AGTGGAGAGTACAAGACTTGTATAG | 57.367 | 40.000 | 26.52 | 0.00 | 46.73 | 1.31 |
3803 | 4234 | 7.889073 | AGAAGTGGAGAGTACAAGACTTGTATA | 59.111 | 37.037 | 26.52 | 8.81 | 46.73 | 1.47 |
4002 | 4433 | 2.380084 | AATGAGCTGGCATTGCAAAG | 57.620 | 45.000 | 11.39 | 0.00 | 37.12 | 2.77 |
4108 | 4539 | 5.957796 | GTGTTGAAAATATACGTAGCACTGC | 59.042 | 40.000 | 0.08 | 0.00 | 0.00 | 4.40 |
4335 | 4766 | 8.926374 | TCAAGGTAATCCGAGGTACAATTATTA | 58.074 | 33.333 | 0.00 | 0.00 | 39.05 | 0.98 |
4336 | 4767 | 7.798071 | TCAAGGTAATCCGAGGTACAATTATT | 58.202 | 34.615 | 0.00 | 0.00 | 39.05 | 1.40 |
4337 | 4768 | 7.369551 | TCAAGGTAATCCGAGGTACAATTAT | 57.630 | 36.000 | 0.00 | 0.00 | 39.05 | 1.28 |
4344 | 4775 | 2.742348 | TGCTCAAGGTAATCCGAGGTA | 58.258 | 47.619 | 0.00 | 0.00 | 39.05 | 3.08 |
4383 | 4814 | 1.380380 | GCAGGGCAAGCTAATGGGT | 60.380 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
4384 | 4815 | 1.076485 | AGCAGGGCAAGCTAATGGG | 60.076 | 57.895 | 0.75 | 0.00 | 41.32 | 4.00 |
4385 | 4816 | 2.012902 | GCAGCAGGGCAAGCTAATGG | 62.013 | 60.000 | 2.51 | 0.00 | 41.14 | 3.16 |
4386 | 4817 | 1.035932 | AGCAGCAGGGCAAGCTAATG | 61.036 | 55.000 | 2.51 | 0.00 | 41.14 | 1.90 |
4387 | 4818 | 0.750911 | GAGCAGCAGGGCAAGCTAAT | 60.751 | 55.000 | 7.91 | 0.00 | 40.93 | 1.73 |
4388 | 4819 | 1.377725 | GAGCAGCAGGGCAAGCTAA | 60.378 | 57.895 | 7.91 | 0.00 | 40.93 | 3.09 |
4389 | 4820 | 2.270205 | GAGCAGCAGGGCAAGCTA | 59.730 | 61.111 | 7.91 | 0.00 | 40.93 | 3.32 |
4390 | 4821 | 3.962694 | TGAGCAGCAGGGCAAGCT | 61.963 | 61.111 | 7.70 | 7.70 | 42.82 | 3.74 |
4391 | 4822 | 3.745803 | GTGAGCAGCAGGGCAAGC | 61.746 | 66.667 | 0.00 | 0.00 | 35.83 | 4.01 |
4392 | 4823 | 3.060615 | GGTGAGCAGCAGGGCAAG | 61.061 | 66.667 | 0.00 | 0.00 | 35.83 | 4.01 |
4393 | 4824 | 4.666253 | GGGTGAGCAGCAGGGCAA | 62.666 | 66.667 | 0.00 | 0.00 | 35.83 | 4.52 |
4395 | 4826 | 2.556840 | TAATGGGTGAGCAGCAGGGC | 62.557 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
4396 | 4827 | 0.465097 | CTAATGGGTGAGCAGCAGGG | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4397 | 4828 | 1.099879 | GCTAATGGGTGAGCAGCAGG | 61.100 | 60.000 | 0.00 | 0.00 | 38.62 | 4.85 |
4398 | 4829 | 0.107312 | AGCTAATGGGTGAGCAGCAG | 60.107 | 55.000 | 0.00 | 0.00 | 41.36 | 4.24 |
4399 | 4830 | 0.329261 | AAGCTAATGGGTGAGCAGCA | 59.671 | 50.000 | 0.00 | 0.00 | 41.36 | 4.41 |
4400 | 4831 | 0.737219 | CAAGCTAATGGGTGAGCAGC | 59.263 | 55.000 | 0.00 | 0.00 | 41.36 | 5.25 |
4401 | 4832 | 0.737219 | GCAAGCTAATGGGTGAGCAG | 59.263 | 55.000 | 0.00 | 0.00 | 41.36 | 4.24 |
4402 | 4833 | 0.680921 | GGCAAGCTAATGGGTGAGCA | 60.681 | 55.000 | 0.00 | 0.00 | 41.36 | 4.26 |
4403 | 4834 | 1.387295 | GGGCAAGCTAATGGGTGAGC | 61.387 | 60.000 | 0.00 | 0.00 | 39.08 | 4.26 |
4404 | 4835 | 0.257039 | AGGGCAAGCTAATGGGTGAG | 59.743 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
4405 | 4836 | 0.034186 | CAGGGCAAGCTAATGGGTGA | 60.034 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
4406 | 4837 | 1.669999 | GCAGGGCAAGCTAATGGGTG | 61.670 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4407 | 4838 | 1.380380 | GCAGGGCAAGCTAATGGGT | 60.380 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
4528 | 4959 | 1.852895 | GTATCACTTAGCAAGCGACGG | 59.147 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
4536 | 4967 | 6.038382 | GCTACAGTAGAGTGTATCACTTAGCA | 59.962 | 42.308 | 12.15 | 0.00 | 45.44 | 3.49 |
4554 | 4985 | 2.126307 | CGCGCACAGAGCTACAGT | 60.126 | 61.111 | 8.75 | 0.00 | 42.61 | 3.55 |
4584 | 5015 | 0.599728 | CTCTCGCTAATCCCTGCTGC | 60.600 | 60.000 | 0.00 | 0.00 | 0.00 | 5.25 |
4604 | 5036 | 4.832608 | GCCACACCGATCCCGTCC | 62.833 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
4646 | 5078 | 8.924511 | TCTTGAAATGTTTTTCTCCTATCACT | 57.075 | 30.769 | 0.75 | 0.00 | 41.54 | 3.41 |
4687 | 5119 | 2.103263 | AGAGAAACCAGCTCGTGAAGTT | 59.897 | 45.455 | 0.00 | 0.00 | 37.46 | 2.66 |
4691 | 5123 | 1.328279 | TGAGAGAAACCAGCTCGTGA | 58.672 | 50.000 | 0.00 | 0.00 | 37.46 | 4.35 |
4693 | 5125 | 2.094286 | CAGATGAGAGAAACCAGCTCGT | 60.094 | 50.000 | 0.00 | 0.00 | 37.46 | 4.18 |
4792 | 5232 | 6.071221 | TGCGATACCACTAGTTTAGAAGGAAA | 60.071 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
4902 | 5342 | 1.065709 | TGGCCAAGGTCGAGAATAACC | 60.066 | 52.381 | 0.61 | 0.00 | 35.69 | 2.85 |
4905 | 5345 | 1.207089 | CTGTGGCCAAGGTCGAGAATA | 59.793 | 52.381 | 7.24 | 0.00 | 0.00 | 1.75 |
4911 | 5351 | 1.002134 | ATTCCTGTGGCCAAGGTCG | 60.002 | 57.895 | 24.54 | 6.95 | 0.00 | 4.79 |
4992 | 5439 | 1.402787 | TAGACTGATGGCGCTGATGA | 58.597 | 50.000 | 7.64 | 0.00 | 0.00 | 2.92 |
4994 | 5441 | 2.988010 | TTTAGACTGATGGCGCTGAT | 57.012 | 45.000 | 7.64 | 0.00 | 0.00 | 2.90 |
5336 | 5784 | 3.945921 | TGGTTTCGTTTGGTTATGTCACA | 59.054 | 39.130 | 0.00 | 0.00 | 0.00 | 3.58 |
5341 | 5789 | 3.547601 | GTCGTGGTTTCGTTTGGTTATG | 58.452 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
5352 | 5814 | 2.068837 | TGATGGTACGTCGTGGTTTC | 57.931 | 50.000 | 8.47 | 0.98 | 0.00 | 2.78 |
5372 | 5834 | 0.543410 | TAAAGGGGAGTCTGCCGTCA | 60.543 | 55.000 | 6.02 | 0.00 | 0.00 | 4.35 |
5418 | 5880 | 6.044754 | TCCATCTAATCCAGTGGCTATCAAAT | 59.955 | 38.462 | 3.51 | 0.00 | 0.00 | 2.32 |
5472 | 5938 | 6.324512 | AGGCCATTAATATGTTGAATGAGCAA | 59.675 | 34.615 | 5.01 | 0.00 | 33.28 | 3.91 |
5478 | 5944 | 7.297614 | ACCTGTAGGCCATTAATATGTTGAAT | 58.702 | 34.615 | 5.01 | 0.00 | 39.32 | 2.57 |
5499 | 5965 | 6.418057 | AGGCTATAGAGAGAAATCAACCTG | 57.582 | 41.667 | 3.21 | 0.00 | 0.00 | 4.00 |
5500 | 5966 | 7.310361 | GCATAGGCTATAGAGAGAAATCAACCT | 60.310 | 40.741 | 6.72 | 0.00 | 36.96 | 3.50 |
5534 | 6000 | 8.774586 | GTTTCTGTGTAATATCACTCACACTTT | 58.225 | 33.333 | 5.43 | 0.00 | 41.43 | 2.66 |
5537 | 6003 | 6.183360 | CGGTTTCTGTGTAATATCACTCACAC | 60.183 | 42.308 | 0.00 | 0.00 | 41.28 | 3.82 |
5561 | 6029 | 2.006888 | AGTGACTGGAAACACAACACG | 58.993 | 47.619 | 0.00 | 0.00 | 39.18 | 4.49 |
5576 | 6044 | 2.735663 | CAACAGAGACATGCAGAGTGAC | 59.264 | 50.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5587 | 6055 | 1.271543 | CCATTGCCTCCAACAGAGACA | 60.272 | 52.381 | 0.00 | 0.00 | 46.50 | 3.41 |
5588 | 6056 | 1.271597 | ACCATTGCCTCCAACAGAGAC | 60.272 | 52.381 | 0.00 | 0.00 | 46.50 | 3.36 |
5605 | 6073 | 1.326213 | CCCAAGCACAACCAACACCA | 61.326 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
5681 | 6149 | 3.334583 | TCTGAGTTAGCAGGCGAATTT | 57.665 | 42.857 | 0.00 | 0.00 | 36.55 | 1.82 |
5858 | 6326 | 2.828877 | CTGTTTCAGGTGGTAACGACA | 58.171 | 47.619 | 0.00 | 0.00 | 42.51 | 4.35 |
5898 | 6366 | 1.515521 | CTCCAACCGTCCAGCCAAAC | 61.516 | 60.000 | 0.00 | 0.00 | 0.00 | 2.93 |
5939 | 6407 | 4.395231 | CGTTCCAGATACAGACAGTGTAGA | 59.605 | 45.833 | 0.00 | 0.00 | 45.06 | 2.59 |
5943 | 6411 | 2.263077 | GCGTTCCAGATACAGACAGTG | 58.737 | 52.381 | 0.00 | 0.00 | 0.00 | 3.66 |
5962 | 6430 | 5.287513 | ACACAAGACGTTACAAAATGTTTGC | 59.712 | 36.000 | 0.00 | 0.00 | 34.92 | 3.68 |
6012 | 6483 | 1.328680 | CGCCGGAGTTCAGAATCAATG | 59.671 | 52.381 | 5.05 | 0.00 | 0.00 | 2.82 |
6077 | 6548 | 4.382754 | GCCACTTCGTTGTTTTCATGATTC | 59.617 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
6185 | 6662 | 4.517285 | ACTCAACCAACTATAGCCACATG | 58.483 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
6189 | 6666 | 4.901197 | TCAACTCAACCAACTATAGCCA | 57.099 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
6204 | 6681 | 4.516698 | TCTTGTTCATCCTTGCTTCAACTC | 59.483 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
6212 | 6689 | 6.849588 | AACAAATTTCTTGTTCATCCTTGC | 57.150 | 33.333 | 0.00 | 0.00 | 38.10 | 4.01 |
6221 | 6698 | 7.981142 | TCAGACGACTAAACAAATTTCTTGTT | 58.019 | 30.769 | 0.00 | 0.00 | 43.72 | 2.83 |
6241 | 6718 | 4.997395 | TGTGTATTCCAAAGAAGCTCAGAC | 59.003 | 41.667 | 0.00 | 0.00 | 34.86 | 3.51 |
6242 | 6719 | 5.227569 | TGTGTATTCCAAAGAAGCTCAGA | 57.772 | 39.130 | 0.00 | 0.00 | 34.86 | 3.27 |
6310 | 6795 | 6.909550 | TGTTAAGGGCATTGTACAAGAATT | 57.090 | 33.333 | 14.65 | 6.93 | 0.00 | 2.17 |
6341 | 6945 | 3.193267 | GTGGTGTTGGTCAATGCATATGT | 59.807 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
6393 | 6999 | 3.069016 | TCAAGTACTTCTGCCGACTTTCA | 59.931 | 43.478 | 4.77 | 0.00 | 29.73 | 2.69 |
6439 | 7045 | 0.678048 | GAGGGTTGACATCACCAGGC | 60.678 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6459 | 7065 | 2.094286 | AGAGAACTGACGGAGCAATGAG | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
6469 | 7075 | 3.927142 | GGACATACCAAAGAGAACTGACG | 59.073 | 47.826 | 0.00 | 0.00 | 38.79 | 4.35 |
6470 | 7076 | 5.153950 | AGGACATACCAAAGAGAACTGAC | 57.846 | 43.478 | 0.00 | 0.00 | 42.04 | 3.51 |
6471 | 7077 | 5.825593 | AAGGACATACCAAAGAGAACTGA | 57.174 | 39.130 | 0.00 | 0.00 | 42.04 | 3.41 |
6472 | 7078 | 6.884280 | AAAAGGACATACCAAAGAGAACTG | 57.116 | 37.500 | 0.00 | 0.00 | 42.04 | 3.16 |
6528 | 7134 | 6.910536 | ATTTTCAGGTCGCAAGTTAGATAG | 57.089 | 37.500 | 0.00 | 0.00 | 39.48 | 2.08 |
6621 | 7227 | 0.968405 | CCACCATGTTCCAAAGGGTG | 59.032 | 55.000 | 0.00 | 0.00 | 46.63 | 4.61 |
6692 | 7300 | 8.952278 | GTTTATTGGGAAAAAGTTTTGGAAGTT | 58.048 | 29.630 | 0.61 | 0.00 | 0.00 | 2.66 |
6693 | 7301 | 8.325787 | AGTTTATTGGGAAAAAGTTTTGGAAGT | 58.674 | 29.630 | 0.61 | 0.00 | 0.00 | 3.01 |
6694 | 7302 | 8.731275 | AGTTTATTGGGAAAAAGTTTTGGAAG | 57.269 | 30.769 | 0.61 | 0.00 | 0.00 | 3.46 |
6714 | 7322 | 4.439057 | ACAGAAACGACAGCTCAAGTTTA | 58.561 | 39.130 | 9.17 | 0.00 | 37.00 | 2.01 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.