Multiple sequence alignment - TraesCS3A01G110000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G110000 chr3A 100.000 3626 0 0 1 3626 77412625 77409000 0.000000e+00 6697.0
1 TraesCS3A01G110000 chr3A 87.500 104 12 1 2810 2913 519093595 519093493 6.360000e-23 119.0
2 TraesCS3A01G110000 chr3D 90.658 2387 140 34 424 2768 66309200 66311545 0.000000e+00 3096.0
3 TraesCS3A01G110000 chr3D 89.861 1154 78 21 1643 2790 66139169 66138049 0.000000e+00 1447.0
4 TraesCS3A01G110000 chr3D 88.057 1189 72 33 487 1655 66140687 66139549 0.000000e+00 1345.0
5 TraesCS3A01G110000 chr3D 93.440 625 37 3 3003 3626 66306914 66306293 0.000000e+00 924.0
6 TraesCS3A01G110000 chr3D 92.480 625 42 4 3003 3626 66300311 66299691 0.000000e+00 889.0
7 TraesCS3A01G110000 chr3D 90.179 672 31 15 2125 2790 66146992 66146350 0.000000e+00 843.0
8 TraesCS3A01G110000 chr3D 94.912 511 24 2 1946 2454 66260860 66260350 0.000000e+00 798.0
9 TraesCS3A01G110000 chr3D 93.612 407 21 4 3221 3626 66137770 66137368 1.440000e-168 603.0
10 TraesCS3A01G110000 chr3D 91.335 427 36 1 1765 2191 66124737 66124312 1.880000e-162 582.0
11 TraesCS3A01G110000 chr3D 92.412 369 23 4 3101 3468 66252201 66251837 4.150000e-144 521.0
12 TraesCS3A01G110000 chr3D 93.314 344 18 5 3221 3563 66121973 66121634 1.500000e-138 503.0
13 TraesCS3A01G110000 chr3D 83.591 518 43 19 2279 2790 66124291 66123810 7.140000e-122 448.0
14 TraesCS3A01G110000 chr3D 92.440 291 15 4 2907 3194 66138052 66137766 3.370000e-110 409.0
15 TraesCS3A01G110000 chr3D 93.309 269 9 3 2907 3170 66252463 66252199 4.390000e-104 388.0
16 TraesCS3A01G110000 chr3D 86.604 321 12 14 2476 2790 66237496 66237201 3.490000e-85 326.0
17 TraesCS3A01G110000 chr3D 92.670 191 12 2 3003 3193 66237700 66237512 1.280000e-69 274.0
18 TraesCS3A01G110000 chr3D 82.000 350 13 10 2448 2790 66252766 66252460 6.010000e-63 252.0
19 TraesCS3A01G110000 chr3D 85.581 215 12 9 2907 3102 66123813 66123599 1.320000e-49 207.0
20 TraesCS3A01G110000 chr3D 86.559 186 23 2 218 402 569776033 569776217 1.710000e-48 204.0
21 TraesCS3A01G110000 chr3D 89.286 140 14 1 218 357 133543944 133544082 1.340000e-39 174.0
22 TraesCS3A01G110000 chr3D 90.816 98 8 1 3097 3194 66122065 66121969 2.940000e-26 130.0
23 TraesCS3A01G110000 chr3D 94.872 78 4 0 2907 2984 66146353 66146276 4.920000e-24 122.0
24 TraesCS3A01G110000 chr3D 94.595 37 2 0 712 748 66147049 66147013 1.410000e-04 58.4
25 TraesCS3A01G110000 chr3D 97.059 34 1 0 1291 1324 66260940 66260907 1.410000e-04 58.4
26 TraesCS3A01G110000 chr3B 92.943 1573 82 12 1236 2790 109862124 109860563 0.000000e+00 2263.0
27 TraesCS3A01G110000 chr3B 88.567 726 65 11 2907 3626 109797348 109796635 0.000000e+00 865.0
28 TraesCS3A01G110000 chr3B 86.896 786 47 25 424 1197 109862868 109862127 0.000000e+00 830.0
29 TraesCS3A01G110000 chr3B 84.375 448 43 14 2907 3337 109860566 109860129 7.240000e-112 414.0
30 TraesCS3A01G110000 chr3B 88.785 107 12 0 2684 2790 109797451 109797345 8.170000e-27 132.0
31 TraesCS3A01G110000 chr1B 77.507 698 129 20 1703 2380 660315977 660316666 9.440000e-106 394.0
32 TraesCS3A01G110000 chr1B 74.029 901 191 33 1565 2448 188261124 188261998 9.710000e-86 327.0
33 TraesCS3A01G110000 chr1B 76.732 563 115 13 1829 2380 660287248 660287805 2.120000e-77 300.0
34 TraesCS3A01G110000 chr1B 89.157 166 14 4 204 368 368167201 368167363 1.710000e-48 204.0
35 TraesCS3A01G110000 chr1B 82.301 113 11 4 2411 2523 660231780 660231677 4.990000e-14 89.8
36 TraesCS3A01G110000 chr1A 74.276 898 194 28 1565 2448 135967458 135968332 9.640000e-91 344.0
37 TraesCS3A01G110000 chr1A 87.963 108 8 4 246 352 467261609 467261506 4.920000e-24 122.0
38 TraesCS3A01G110000 chr1A 83.636 110 12 3 2411 2520 570615796 570615899 8.290000e-17 99.0
39 TraesCS3A01G110000 chr1D 74.025 897 198 27 1565 2448 123699332 123700206 2.090000e-87 333.0
40 TraesCS3A01G110000 chr1D 82.301 113 11 5 2411 2523 474968354 474968251 4.990000e-14 89.8
41 TraesCS3A01G110000 chr2B 83.544 158 20 5 1681 1835 68149926 68150080 3.770000e-30 143.0
42 TraesCS3A01G110000 chr2B 85.938 128 13 3 2788 2915 354076353 354076231 8.170000e-27 132.0
43 TraesCS3A01G110000 chr2D 86.992 123 12 2 2789 2911 638458887 638458769 6.320000e-28 135.0
44 TraesCS3A01G110000 chr2D 84.553 123 14 4 2788 2910 111105683 111105800 2.290000e-22 117.0
45 TraesCS3A01G110000 chr2A 82.456 114 20 0 1722 1835 44849736 44849849 2.300000e-17 100.0
46 TraesCS3A01G110000 chr7A 100.000 29 0 0 3219 3247 105209185 105209157 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G110000 chr3A 77409000 77412625 3625 True 6697.000000 6697 100.000000 1 3626 1 chr3A.!!$R1 3625
1 TraesCS3A01G110000 chr3D 66309200 66311545 2345 False 3096.000000 3096 90.658000 424 2768 1 chr3D.!!$F1 2344
2 TraesCS3A01G110000 chr3D 66137368 66140687 3319 True 951.000000 1447 90.992500 487 3626 4 chr3D.!!$R4 3139
3 TraesCS3A01G110000 chr3D 66306293 66306914 621 True 924.000000 924 93.440000 3003 3626 1 chr3D.!!$R2 623
4 TraesCS3A01G110000 chr3D 66299691 66300311 620 True 889.000000 889 92.480000 3003 3626 1 chr3D.!!$R1 623
5 TraesCS3A01G110000 chr3D 66260350 66260940 590 True 428.200000 798 95.985500 1291 2454 2 chr3D.!!$R8 1163
6 TraesCS3A01G110000 chr3D 66251837 66252766 929 True 387.000000 521 89.240333 2448 3468 3 chr3D.!!$R7 1020
7 TraesCS3A01G110000 chr3D 66121634 66124737 3103 True 374.000000 582 88.927400 1765 3563 5 chr3D.!!$R3 1798
8 TraesCS3A01G110000 chr3D 66146276 66147049 773 True 341.133333 843 93.215333 712 2984 3 chr3D.!!$R5 2272
9 TraesCS3A01G110000 chr3B 109860129 109862868 2739 True 1169.000000 2263 88.071333 424 3337 3 chr3B.!!$R2 2913
10 TraesCS3A01G110000 chr3B 109796635 109797451 816 True 498.500000 865 88.676000 2684 3626 2 chr3B.!!$R1 942
11 TraesCS3A01G110000 chr1B 660315977 660316666 689 False 394.000000 394 77.507000 1703 2380 1 chr1B.!!$F4 677
12 TraesCS3A01G110000 chr1B 188261124 188261998 874 False 327.000000 327 74.029000 1565 2448 1 chr1B.!!$F1 883
13 TraesCS3A01G110000 chr1B 660287248 660287805 557 False 300.000000 300 76.732000 1829 2380 1 chr1B.!!$F3 551
14 TraesCS3A01G110000 chr1A 135967458 135968332 874 False 344.000000 344 74.276000 1565 2448 1 chr1A.!!$F1 883
15 TraesCS3A01G110000 chr1D 123699332 123700206 874 False 333.000000 333 74.025000 1565 2448 1 chr1D.!!$F1 883


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
823 859 0.035439 TCGCATTCCTTCCTTCCACC 60.035 55.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2797 3294 0.231279 CAAGTTTTCGTGGACGGACG 59.769 55.0 0.0 0.0 40.83 4.79 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.855715 TCAGTAGGAGGCTCGATTTATG 57.144 45.455 8.69 2.84 0.00 1.90
24 25 3.574396 TCAGTAGGAGGCTCGATTTATGG 59.426 47.826 8.69 0.00 0.00 2.74
25 26 2.900546 AGTAGGAGGCTCGATTTATGGG 59.099 50.000 8.69 0.00 0.00 4.00
26 27 0.398318 AGGAGGCTCGATTTATGGGC 59.602 55.000 8.69 0.00 0.00 5.36
27 28 0.398318 GGAGGCTCGATTTATGGGCT 59.602 55.000 8.69 0.00 37.30 5.19
28 29 1.623811 GGAGGCTCGATTTATGGGCTA 59.376 52.381 8.69 0.00 34.78 3.93
29 30 2.038557 GGAGGCTCGATTTATGGGCTAA 59.961 50.000 8.69 0.00 34.78 3.09
30 31 3.067833 GAGGCTCGATTTATGGGCTAAC 58.932 50.000 0.00 0.00 34.78 2.34
31 32 2.152016 GGCTCGATTTATGGGCTAACC 58.848 52.381 0.00 0.00 40.81 2.85
43 44 2.808906 GGCTAACCCCTTCATCTTGT 57.191 50.000 0.00 0.00 0.00 3.16
44 45 3.087370 GGCTAACCCCTTCATCTTGTT 57.913 47.619 0.00 0.00 0.00 2.83
45 46 3.017442 GGCTAACCCCTTCATCTTGTTC 58.983 50.000 0.00 0.00 0.00 3.18
46 47 3.308473 GGCTAACCCCTTCATCTTGTTCT 60.308 47.826 0.00 0.00 0.00 3.01
47 48 3.691609 GCTAACCCCTTCATCTTGTTCTG 59.308 47.826 0.00 0.00 0.00 3.02
48 49 2.206576 ACCCCTTCATCTTGTTCTGC 57.793 50.000 0.00 0.00 0.00 4.26
49 50 1.707427 ACCCCTTCATCTTGTTCTGCT 59.293 47.619 0.00 0.00 0.00 4.24
50 51 2.290577 ACCCCTTCATCTTGTTCTGCTC 60.291 50.000 0.00 0.00 0.00 4.26
51 52 2.363683 CCCTTCATCTTGTTCTGCTCC 58.636 52.381 0.00 0.00 0.00 4.70
52 53 2.026449 CCCTTCATCTTGTTCTGCTCCT 60.026 50.000 0.00 0.00 0.00 3.69
53 54 3.008330 CCTTCATCTTGTTCTGCTCCTG 58.992 50.000 0.00 0.00 0.00 3.86
54 55 2.105006 TCATCTTGTTCTGCTCCTGC 57.895 50.000 0.00 0.00 40.20 4.85
56 57 1.467734 CATCTTGTTCTGCTCCTGCAC 59.532 52.381 0.00 0.00 45.31 4.57
57 58 0.761187 TCTTGTTCTGCTCCTGCACT 59.239 50.000 0.00 0.00 45.31 4.40
58 59 1.141657 TCTTGTTCTGCTCCTGCACTT 59.858 47.619 0.00 0.00 45.31 3.16
59 60 1.266175 CTTGTTCTGCTCCTGCACTTG 59.734 52.381 0.00 0.00 45.31 3.16
60 61 1.168407 TGTTCTGCTCCTGCACTTGC 61.168 55.000 0.00 0.00 45.31 4.01
71 72 3.341043 CACTTGCAGTCGCGCTGT 61.341 61.111 24.37 8.40 46.64 4.40
72 73 2.588877 ACTTGCAGTCGCGCTGTT 60.589 55.556 24.37 9.87 46.64 3.16
73 74 2.127496 CTTGCAGTCGCGCTGTTG 60.127 61.111 24.37 14.53 46.64 3.33
74 75 4.312231 TTGCAGTCGCGCTGTTGC 62.312 61.111 24.37 19.40 46.64 4.17
87 88 3.109230 GCTGTTGCGAGTTACATCTTG 57.891 47.619 0.00 0.00 0.00 3.02
88 89 2.480419 GCTGTTGCGAGTTACATCTTGT 59.520 45.455 0.00 0.00 0.00 3.16
89 90 3.678072 GCTGTTGCGAGTTACATCTTGTA 59.322 43.478 0.00 0.00 0.00 2.41
90 91 4.151689 GCTGTTGCGAGTTACATCTTGTAA 59.848 41.667 0.00 0.00 40.21 2.41
91 92 5.163854 GCTGTTGCGAGTTACATCTTGTAAT 60.164 40.000 3.64 0.00 43.74 1.89
92 93 6.620733 GCTGTTGCGAGTTACATCTTGTAATT 60.621 38.462 3.64 0.00 43.74 1.40
93 94 6.598525 TGTTGCGAGTTACATCTTGTAATTG 58.401 36.000 3.64 0.00 43.74 2.32
94 95 6.425417 TGTTGCGAGTTACATCTTGTAATTGA 59.575 34.615 3.64 0.00 43.74 2.57
95 96 7.119116 TGTTGCGAGTTACATCTTGTAATTGAT 59.881 33.333 3.64 0.00 43.74 2.57
96 97 8.600625 GTTGCGAGTTACATCTTGTAATTGATA 58.399 33.333 3.64 0.00 43.74 2.15
97 98 8.710835 TGCGAGTTACATCTTGTAATTGATAA 57.289 30.769 3.64 0.00 43.74 1.75
98 99 9.157104 TGCGAGTTACATCTTGTAATTGATAAA 57.843 29.630 3.64 0.00 43.74 1.40
99 100 9.422196 GCGAGTTACATCTTGTAATTGATAAAC 57.578 33.333 3.64 0.00 43.74 2.01
100 101 9.916397 CGAGTTACATCTTGTAATTGATAAACC 57.084 33.333 3.64 0.00 43.74 3.27
105 106 8.738645 ACATCTTGTAATTGATAAACCTCTCC 57.261 34.615 0.00 0.00 0.00 3.71
106 107 7.775561 ACATCTTGTAATTGATAAACCTCTCCC 59.224 37.037 0.00 0.00 0.00 4.30
107 108 7.510675 TCTTGTAATTGATAAACCTCTCCCT 57.489 36.000 0.00 0.00 0.00 4.20
108 109 8.618240 TCTTGTAATTGATAAACCTCTCCCTA 57.382 34.615 0.00 0.00 0.00 3.53
109 110 8.483758 TCTTGTAATTGATAAACCTCTCCCTAC 58.516 37.037 0.00 0.00 0.00 3.18
110 111 7.133133 TGTAATTGATAAACCTCTCCCTACC 57.867 40.000 0.00 0.00 0.00 3.18
111 112 6.674861 TGTAATTGATAAACCTCTCCCTACCA 59.325 38.462 0.00 0.00 0.00 3.25
112 113 6.652205 AATTGATAAACCTCTCCCTACCAA 57.348 37.500 0.00 0.00 0.00 3.67
113 114 6.848562 ATTGATAAACCTCTCCCTACCAAT 57.151 37.500 0.00 0.00 0.00 3.16
114 115 5.630415 TGATAAACCTCTCCCTACCAATG 57.370 43.478 0.00 0.00 0.00 2.82
115 116 5.285401 TGATAAACCTCTCCCTACCAATGA 58.715 41.667 0.00 0.00 0.00 2.57
116 117 5.729229 TGATAAACCTCTCCCTACCAATGAA 59.271 40.000 0.00 0.00 0.00 2.57
117 118 6.216662 TGATAAACCTCTCCCTACCAATGAAA 59.783 38.462 0.00 0.00 0.00 2.69
118 119 5.536497 AAACCTCTCCCTACCAATGAAAT 57.464 39.130 0.00 0.00 0.00 2.17
119 120 4.510167 ACCTCTCCCTACCAATGAAATG 57.490 45.455 0.00 0.00 0.00 2.32
120 121 4.111577 ACCTCTCCCTACCAATGAAATGA 58.888 43.478 0.00 0.00 0.00 2.57
121 122 4.728860 ACCTCTCCCTACCAATGAAATGAT 59.271 41.667 0.00 0.00 0.00 2.45
122 123 5.911178 ACCTCTCCCTACCAATGAAATGATA 59.089 40.000 0.00 0.00 0.00 2.15
123 124 6.183361 ACCTCTCCCTACCAATGAAATGATAC 60.183 42.308 0.00 0.00 0.00 2.24
124 125 6.183361 CCTCTCCCTACCAATGAAATGATACA 60.183 42.308 0.00 0.00 0.00 2.29
125 126 7.392766 TCTCCCTACCAATGAAATGATACAT 57.607 36.000 0.00 0.00 0.00 2.29
126 127 8.504811 TCTCCCTACCAATGAAATGATACATA 57.495 34.615 0.00 0.00 0.00 2.29
127 128 8.944138 TCTCCCTACCAATGAAATGATACATAA 58.056 33.333 0.00 0.00 0.00 1.90
128 129 9.745018 CTCCCTACCAATGAAATGATACATAAT 57.255 33.333 0.00 0.00 0.00 1.28
133 134 8.578308 ACCAATGAAATGATACATAATTTGCG 57.422 30.769 0.00 0.00 0.00 4.85
134 135 8.196771 ACCAATGAAATGATACATAATTTGCGT 58.803 29.630 0.00 0.00 0.00 5.24
135 136 9.676195 CCAATGAAATGATACATAATTTGCGTA 57.324 29.630 0.00 0.00 0.00 4.42
172 173 8.743085 AACTTAACTATACACGATACTCTCCA 57.257 34.615 0.00 0.00 0.00 3.86
173 174 8.152309 ACTTAACTATACACGATACTCTCCAC 57.848 38.462 0.00 0.00 0.00 4.02
174 175 7.772292 ACTTAACTATACACGATACTCTCCACA 59.228 37.037 0.00 0.00 0.00 4.17
175 176 8.687292 TTAACTATACACGATACTCTCCACAT 57.313 34.615 0.00 0.00 0.00 3.21
176 177 6.804770 ACTATACACGATACTCTCCACATC 57.195 41.667 0.00 0.00 0.00 3.06
177 178 6.296803 ACTATACACGATACTCTCCACATCA 58.703 40.000 0.00 0.00 0.00 3.07
178 179 6.771267 ACTATACACGATACTCTCCACATCAA 59.229 38.462 0.00 0.00 0.00 2.57
179 180 4.801330 ACACGATACTCTCCACATCAAA 57.199 40.909 0.00 0.00 0.00 2.69
180 181 4.495422 ACACGATACTCTCCACATCAAAC 58.505 43.478 0.00 0.00 0.00 2.93
181 182 4.021456 ACACGATACTCTCCACATCAAACA 60.021 41.667 0.00 0.00 0.00 2.83
182 183 5.111989 CACGATACTCTCCACATCAAACAT 58.888 41.667 0.00 0.00 0.00 2.71
183 184 5.006068 CACGATACTCTCCACATCAAACATG 59.994 44.000 0.00 0.00 0.00 3.21
184 185 4.025396 CGATACTCTCCACATCAAACATGC 60.025 45.833 0.00 0.00 0.00 4.06
185 186 2.440409 ACTCTCCACATCAAACATGCC 58.560 47.619 0.00 0.00 0.00 4.40
186 187 2.040813 ACTCTCCACATCAAACATGCCT 59.959 45.455 0.00 0.00 0.00 4.75
187 188 3.087031 CTCTCCACATCAAACATGCCTT 58.913 45.455 0.00 0.00 0.00 4.35
188 189 3.084039 TCTCCACATCAAACATGCCTTC 58.916 45.455 0.00 0.00 0.00 3.46
189 190 2.821378 CTCCACATCAAACATGCCTTCA 59.179 45.455 0.00 0.00 0.00 3.02
190 191 3.229293 TCCACATCAAACATGCCTTCAA 58.771 40.909 0.00 0.00 0.00 2.69
191 192 3.640498 TCCACATCAAACATGCCTTCAAA 59.360 39.130 0.00 0.00 0.00 2.69
192 193 3.991773 CCACATCAAACATGCCTTCAAAG 59.008 43.478 0.00 0.00 0.00 2.77
193 194 3.430895 CACATCAAACATGCCTTCAAAGC 59.569 43.478 0.00 0.00 0.00 3.51
194 195 3.069872 ACATCAAACATGCCTTCAAAGCA 59.930 39.130 0.00 0.00 45.94 3.91
206 207 2.661504 TCAAAGCATGAAACACGACG 57.338 45.000 0.00 0.00 34.30 5.12
207 208 1.262950 TCAAAGCATGAAACACGACGG 59.737 47.619 0.00 0.00 34.30 4.79
208 209 0.591170 AAAGCATGAAACACGACGGG 59.409 50.000 0.00 0.00 0.00 5.28
209 210 1.234615 AAGCATGAAACACGACGGGG 61.235 55.000 0.43 0.00 0.00 5.73
210 211 2.867472 CATGAAACACGACGGGGC 59.133 61.111 0.43 0.00 0.00 5.80
211 212 1.671054 CATGAAACACGACGGGGCT 60.671 57.895 0.43 0.00 0.00 5.19
212 213 1.671054 ATGAAACACGACGGGGCTG 60.671 57.895 0.43 0.00 0.00 4.85
213 214 3.047877 GAAACACGACGGGGCTGG 61.048 66.667 0.43 0.00 0.00 4.85
220 221 4.038080 GACGGGGCTGGCGTTTTG 62.038 66.667 0.00 0.00 0.00 2.44
224 225 4.056125 GGGCTGGCGTTTTGGCTC 62.056 66.667 0.00 0.00 45.14 4.70
225 226 4.056125 GGCTGGCGTTTTGGCTCC 62.056 66.667 0.00 0.00 45.14 4.70
226 227 4.056125 GCTGGCGTTTTGGCTCCC 62.056 66.667 0.00 0.00 45.14 4.30
227 228 3.737172 CTGGCGTTTTGGCTCCCG 61.737 66.667 0.00 0.00 45.14 5.14
231 232 2.746277 CGTTTTGGCTCCCGGGAG 60.746 66.667 41.29 41.29 44.56 4.30
241 242 0.172803 CTCCCGGGAGAACAGTAACG 59.827 60.000 42.70 14.84 44.53 3.18
242 243 1.447314 CCCGGGAGAACAGTAACGC 60.447 63.158 18.48 0.00 0.00 4.84
243 244 1.804326 CCGGGAGAACAGTAACGCG 60.804 63.158 3.53 3.53 38.16 6.01
244 245 1.210931 CGGGAGAACAGTAACGCGA 59.789 57.895 15.93 0.00 40.15 5.87
245 246 0.387622 CGGGAGAACAGTAACGCGAA 60.388 55.000 15.93 0.00 40.15 4.70
246 247 1.787012 GGGAGAACAGTAACGCGAAA 58.213 50.000 15.93 0.00 0.00 3.46
247 248 2.137523 GGGAGAACAGTAACGCGAAAA 58.862 47.619 15.93 0.00 0.00 2.29
248 249 2.545106 GGGAGAACAGTAACGCGAAAAA 59.455 45.455 15.93 0.00 0.00 1.94
307 308 7.694388 TTGTAGATGATTGTATTAGTGTCGC 57.306 36.000 0.00 0.00 0.00 5.19
308 309 6.801575 TGTAGATGATTGTATTAGTGTCGCA 58.198 36.000 0.00 0.00 0.00 5.10
309 310 6.918022 TGTAGATGATTGTATTAGTGTCGCAG 59.082 38.462 0.00 0.00 0.00 5.18
310 311 6.149129 AGATGATTGTATTAGTGTCGCAGA 57.851 37.500 0.00 0.00 0.00 4.26
337 338 3.574284 TGACAATTTTCATGGGAAGCG 57.426 42.857 0.00 0.00 33.82 4.68
338 339 2.230992 TGACAATTTTCATGGGAAGCGG 59.769 45.455 0.00 0.00 33.82 5.52
339 340 2.491693 GACAATTTTCATGGGAAGCGGA 59.508 45.455 0.00 0.00 33.82 5.54
340 341 2.493278 ACAATTTTCATGGGAAGCGGAG 59.507 45.455 0.00 0.00 33.82 4.63
353 354 4.383602 CGGAGCGGCGGTGTTTTG 62.384 66.667 19.47 0.00 0.00 2.44
354 355 3.284449 GGAGCGGCGGTGTTTTGT 61.284 61.111 19.47 0.00 0.00 2.83
355 356 2.251371 GAGCGGCGGTGTTTTGTC 59.749 61.111 19.47 0.00 0.00 3.18
356 357 3.573489 GAGCGGCGGTGTTTTGTCG 62.573 63.158 19.47 0.00 36.04 4.35
357 358 4.676586 GCGGCGGTGTTTTGTCGG 62.677 66.667 9.78 0.00 32.98 4.79
358 359 4.676586 CGGCGGTGTTTTGTCGGC 62.677 66.667 0.00 0.00 44.25 5.54
359 360 4.337060 GGCGGTGTTTTGTCGGCC 62.337 66.667 0.00 0.00 42.38 6.13
360 361 4.337060 GCGGTGTTTTGTCGGCCC 62.337 66.667 0.00 0.00 0.00 5.80
361 362 2.902846 CGGTGTTTTGTCGGCCCA 60.903 61.111 0.00 0.00 0.00 5.36
362 363 2.482333 CGGTGTTTTGTCGGCCCAA 61.482 57.895 0.00 0.00 0.00 4.12
363 364 1.817209 GGTGTTTTGTCGGCCCAAA 59.183 52.632 0.00 0.00 32.70 3.28
364 365 0.175989 GGTGTTTTGTCGGCCCAAAA 59.824 50.000 13.89 13.89 40.88 2.44
365 366 1.405661 GGTGTTTTGTCGGCCCAAAAA 60.406 47.619 18.04 10.23 43.68 1.94
399 400 8.927411 AGGATGATATTTTGGGATAACTTTTGG 58.073 33.333 0.00 0.00 0.00 3.28
400 401 8.704668 GGATGATATTTTGGGATAACTTTTGGT 58.295 33.333 0.00 0.00 0.00 3.67
401 402 9.533253 GATGATATTTTGGGATAACTTTTGGTG 57.467 33.333 0.00 0.00 0.00 4.17
402 403 8.429237 TGATATTTTGGGATAACTTTTGGTGT 57.571 30.769 0.00 0.00 0.00 4.16
403 404 8.875168 TGATATTTTGGGATAACTTTTGGTGTT 58.125 29.630 0.00 0.00 0.00 3.32
404 405 9.150348 GATATTTTGGGATAACTTTTGGTGTTG 57.850 33.333 0.00 0.00 0.00 3.33
405 406 4.946478 TTGGGATAACTTTTGGTGTTGG 57.054 40.909 0.00 0.00 0.00 3.77
406 407 4.186077 TGGGATAACTTTTGGTGTTGGA 57.814 40.909 0.00 0.00 0.00 3.53
407 408 4.148838 TGGGATAACTTTTGGTGTTGGAG 58.851 43.478 0.00 0.00 0.00 3.86
408 409 4.141135 TGGGATAACTTTTGGTGTTGGAGA 60.141 41.667 0.00 0.00 0.00 3.71
409 410 4.459337 GGGATAACTTTTGGTGTTGGAGAG 59.541 45.833 0.00 0.00 0.00 3.20
410 411 4.082733 GGATAACTTTTGGTGTTGGAGAGC 60.083 45.833 0.00 0.00 0.00 4.09
411 412 1.308998 ACTTTTGGTGTTGGAGAGCG 58.691 50.000 0.00 0.00 0.00 5.03
412 413 0.593128 CTTTTGGTGTTGGAGAGCGG 59.407 55.000 0.00 0.00 0.00 5.52
413 414 0.181587 TTTTGGTGTTGGAGAGCGGA 59.818 50.000 0.00 0.00 0.00 5.54
414 415 0.250295 TTTGGTGTTGGAGAGCGGAG 60.250 55.000 0.00 0.00 0.00 4.63
456 462 4.489679 ACCGTGAAAGCATCTTTTTCTC 57.510 40.909 0.00 0.00 35.94 2.87
463 469 5.009010 TGAAAGCATCTTTTTCTCCTGTGAC 59.991 40.000 0.00 0.00 35.94 3.67
505 511 5.161358 GGTCAATCCATTCCGTTCTTTTTC 58.839 41.667 0.00 0.00 35.97 2.29
512 518 6.222389 TCCATTCCGTTCTTTTTCTAACGTA 58.778 36.000 6.82 0.00 45.26 3.57
515 522 8.019094 CCATTCCGTTCTTTTTCTAACGTAAAT 58.981 33.333 6.82 4.05 45.26 1.40
534 541 6.598064 CGTAAATCAGTCCAAAACTAATCCCT 59.402 38.462 0.00 0.00 36.07 4.20
551 558 1.199097 CCCTACGGCACAACATTTGAC 59.801 52.381 0.00 0.00 0.00 3.18
558 565 4.142359 ACGGCACAACATTTGACTAAACAA 60.142 37.500 0.00 0.00 0.00 2.83
560 567 5.276161 CGGCACAACATTTGACTAAACAAAC 60.276 40.000 0.00 0.00 41.49 2.93
561 568 5.578727 GGCACAACATTTGACTAAACAAACA 59.421 36.000 0.00 0.00 41.49 2.83
563 570 6.237808 GCACAACATTTGACTAAACAAACAGG 60.238 38.462 0.00 0.00 41.49 4.00
564 571 6.255453 CACAACATTTGACTAAACAAACAGGG 59.745 38.462 0.00 0.00 41.49 4.45
565 572 6.071051 ACAACATTTGACTAAACAAACAGGGT 60.071 34.615 0.00 0.00 41.49 4.34
566 573 6.144078 ACATTTGACTAAACAAACAGGGTC 57.856 37.500 0.00 0.00 41.49 4.46
567 574 4.886247 TTTGACTAAACAAACAGGGTCG 57.114 40.909 0.00 0.00 35.29 4.79
674 702 0.671251 GCAACGGACCCAAACAATCA 59.329 50.000 0.00 0.00 0.00 2.57
675 703 1.601914 GCAACGGACCCAAACAATCAC 60.602 52.381 0.00 0.00 0.00 3.06
676 704 1.000717 CAACGGACCCAAACAATCACC 60.001 52.381 0.00 0.00 0.00 4.02
678 706 0.538516 CGGACCCAAACAATCACCCA 60.539 55.000 0.00 0.00 0.00 4.51
679 707 1.710816 GGACCCAAACAATCACCCAA 58.289 50.000 0.00 0.00 0.00 4.12
694 725 2.904434 CACCCAAACTACTACTCCCACT 59.096 50.000 0.00 0.00 0.00 4.00
819 855 0.391263 ACCGTCGCATTCCTTCCTTC 60.391 55.000 0.00 0.00 0.00 3.46
820 856 1.090052 CCGTCGCATTCCTTCCTTCC 61.090 60.000 0.00 0.00 0.00 3.46
821 857 0.391130 CGTCGCATTCCTTCCTTCCA 60.391 55.000 0.00 0.00 0.00 3.53
822 858 1.087501 GTCGCATTCCTTCCTTCCAC 58.912 55.000 0.00 0.00 0.00 4.02
823 859 0.035439 TCGCATTCCTTCCTTCCACC 60.035 55.000 0.00 0.00 0.00 4.61
857 897 4.742743 GCGTGCCCAGAACCTTTATATACT 60.743 45.833 0.00 0.00 0.00 2.12
861 901 4.566987 CCCAGAACCTTTATATACTCCGC 58.433 47.826 0.00 0.00 0.00 5.54
871 911 1.924731 TATACTCCGCCTCCATCCAG 58.075 55.000 0.00 0.00 0.00 3.86
873 913 2.871795 TACTCCGCCTCCATCCAGCA 62.872 60.000 0.00 0.00 0.00 4.41
964 1010 1.205417 CATCCCACCATTGTTTCTGCC 59.795 52.381 0.00 0.00 0.00 4.85
976 1022 2.272230 TTTCTGCCGTTCCACCACCA 62.272 55.000 0.00 0.00 0.00 4.17
977 1023 2.034066 CTGCCGTTCCACCACCAT 59.966 61.111 0.00 0.00 0.00 3.55
1086 1132 4.400120 GAGACCTGTCCTACCTCGATTAT 58.600 47.826 0.00 0.00 0.00 1.28
1214 1260 2.343758 CGTGGTGGGTCTGTGGAG 59.656 66.667 0.00 0.00 0.00 3.86
1223 1269 1.270907 GGTCTGTGGAGTGAGATGGT 58.729 55.000 0.00 0.00 0.00 3.55
1229 1275 2.359169 GGAGTGAGATGGTGGCGGA 61.359 63.158 0.00 0.00 0.00 5.54
1449 1495 2.586357 GGCTCGATTGAGACCGCC 60.586 66.667 14.59 4.65 45.20 6.13
1504 1553 0.109086 CGTCAATGAGTCTCTGGCGT 60.109 55.000 7.69 0.00 33.65 5.68
2098 2561 2.260743 GGACCTTCACCGACGTCC 59.739 66.667 10.58 0.00 38.18 4.79
2256 2726 2.669240 GTGCCCTACTCCCACCAC 59.331 66.667 0.00 0.00 0.00 4.16
2300 2771 0.400213 TTCAACGGGAGACTGGCAAT 59.600 50.000 0.00 0.00 42.76 3.56
2500 2972 1.630026 CTCGACCTAGACGACGACG 59.370 63.158 5.58 5.58 45.75 5.12
2501 2973 0.799917 CTCGACCTAGACGACGACGA 60.800 60.000 15.32 0.00 42.66 4.20
2502 2974 1.073216 TCGACCTAGACGACGACGAC 61.073 60.000 15.32 8.08 42.66 4.34
2503 2975 1.343147 GACCTAGACGACGACGACG 59.657 63.158 17.60 17.60 42.66 5.12
2591 3063 1.001068 CAACATGCTTCACCATGGCAA 59.999 47.619 13.04 3.89 45.29 4.52
2592 3064 0.604578 ACATGCTTCACCATGGCAAC 59.395 50.000 13.04 0.00 45.29 4.17
2622 3094 1.077089 GCGCTGGGACGTCTTTCTAC 61.077 60.000 16.46 0.00 34.88 2.59
2623 3095 0.526662 CGCTGGGACGTCTTTCTACT 59.473 55.000 16.46 0.00 0.00 2.57
2630 3108 3.003585 GGGACGTCTTTCTACTAGCTAGC 59.996 52.174 20.91 6.62 0.00 3.42
2632 3110 4.260866 GGACGTCTTTCTACTAGCTAGCAG 60.261 50.000 20.91 17.31 0.00 4.24
2634 3112 3.549221 CGTCTTTCTACTAGCTAGCAGCC 60.549 52.174 20.91 3.22 43.77 4.85
2635 3113 3.381908 GTCTTTCTACTAGCTAGCAGCCA 59.618 47.826 20.91 4.76 43.77 4.75
2636 3114 3.634448 TCTTTCTACTAGCTAGCAGCCAG 59.366 47.826 20.91 14.83 43.77 4.85
2637 3115 2.738587 TCTACTAGCTAGCAGCCAGT 57.261 50.000 20.91 15.55 44.94 4.00
2638 3116 3.859061 TCTACTAGCTAGCAGCCAGTA 57.141 47.619 20.91 15.82 41.28 2.74
2639 3117 3.478509 TCTACTAGCTAGCAGCCAGTAC 58.521 50.000 20.91 0.00 41.28 2.73
2640 3118 1.404843 ACTAGCTAGCAGCCAGTACC 58.595 55.000 20.91 0.00 41.28 3.34
2641 3119 1.063567 ACTAGCTAGCAGCCAGTACCT 60.064 52.381 20.91 0.00 41.28 3.08
2642 3120 1.339610 CTAGCTAGCAGCCAGTACCTG 59.660 57.143 18.83 0.00 43.77 4.00
2643 3121 0.616111 AGCTAGCAGCCAGTACCTGT 60.616 55.000 18.83 0.00 43.77 4.00
2786 3283 8.469200 TCTCGAGATTAATTAGTCCCGTTTTTA 58.531 33.333 12.08 0.00 0.00 1.52
2787 3284 8.638685 TCGAGATTAATTAGTCCCGTTTTTAG 57.361 34.615 10.79 0.00 0.00 1.85
2788 3285 8.253113 TCGAGATTAATTAGTCCCGTTTTTAGT 58.747 33.333 10.79 0.00 0.00 2.24
2789 3286 9.520204 CGAGATTAATTAGTCCCGTTTTTAGTA 57.480 33.333 4.10 0.00 0.00 1.82
2793 3290 9.605275 ATTAATTAGTCCCGTTTTTAGTACTCC 57.395 33.333 0.00 0.00 0.00 3.85
2794 3291 3.969287 AGTCCCGTTTTTAGTACTCCC 57.031 47.619 0.00 0.00 0.00 4.30
2795 3292 3.514539 AGTCCCGTTTTTAGTACTCCCT 58.485 45.455 0.00 0.00 0.00 4.20
2796 3293 3.513119 AGTCCCGTTTTTAGTACTCCCTC 59.487 47.826 0.00 0.00 0.00 4.30
2797 3294 2.833943 TCCCGTTTTTAGTACTCCCTCC 59.166 50.000 0.00 0.00 0.00 4.30
2798 3295 2.417787 CCCGTTTTTAGTACTCCCTCCG 60.418 54.545 0.00 0.00 0.00 4.63
2799 3296 2.232208 CCGTTTTTAGTACTCCCTCCGT 59.768 50.000 0.00 0.00 0.00 4.69
2800 3297 3.505836 CGTTTTTAGTACTCCCTCCGTC 58.494 50.000 0.00 0.00 0.00 4.79
2801 3298 3.674410 CGTTTTTAGTACTCCCTCCGTCC 60.674 52.174 0.00 0.00 0.00 4.79
2802 3299 1.755179 TTTAGTACTCCCTCCGTCCG 58.245 55.000 0.00 0.00 0.00 4.79
2803 3300 0.620556 TTAGTACTCCCTCCGTCCGT 59.379 55.000 0.00 0.00 0.00 4.69
2804 3301 0.179000 TAGTACTCCCTCCGTCCGTC 59.821 60.000 0.00 0.00 0.00 4.79
2805 3302 2.117779 GTACTCCCTCCGTCCGTCC 61.118 68.421 0.00 0.00 0.00 4.79
2806 3303 2.605607 TACTCCCTCCGTCCGTCCA 61.606 63.158 0.00 0.00 0.00 4.02
2807 3304 2.826777 TACTCCCTCCGTCCGTCCAC 62.827 65.000 0.00 0.00 0.00 4.02
2810 3307 3.367743 CCTCCGTCCGTCCACGAA 61.368 66.667 0.00 0.00 42.69 3.85
2811 3308 2.646719 CTCCGTCCGTCCACGAAA 59.353 61.111 0.00 0.00 42.69 3.46
2812 3309 1.007038 CTCCGTCCGTCCACGAAAA 60.007 57.895 0.00 0.00 42.69 2.29
2813 3310 1.280206 CTCCGTCCGTCCACGAAAAC 61.280 60.000 0.00 0.00 42.69 2.43
2814 3311 1.300388 CCGTCCGTCCACGAAAACT 60.300 57.895 0.00 0.00 42.69 2.66
2815 3312 0.877213 CCGTCCGTCCACGAAAACTT 60.877 55.000 0.00 0.00 42.69 2.66
2816 3313 0.231279 CGTCCGTCCACGAAAACTTG 59.769 55.000 0.00 0.00 42.69 3.16
2817 3314 1.292992 GTCCGTCCACGAAAACTTGT 58.707 50.000 0.00 0.00 43.02 3.16
2818 3315 1.259770 GTCCGTCCACGAAAACTTGTC 59.740 52.381 0.00 0.00 43.02 3.18
2819 3316 0.584876 CCGTCCACGAAAACTTGTCC 59.415 55.000 0.00 0.00 43.02 4.02
2820 3317 0.584876 CGTCCACGAAAACTTGTCCC 59.415 55.000 0.00 0.00 43.02 4.46
2821 3318 1.670791 GTCCACGAAAACTTGTCCCA 58.329 50.000 0.00 0.00 0.00 4.37
2822 3319 2.018515 GTCCACGAAAACTTGTCCCAA 58.981 47.619 0.00 0.00 0.00 4.12
2823 3320 2.424246 GTCCACGAAAACTTGTCCCAAA 59.576 45.455 0.00 0.00 0.00 3.28
2824 3321 3.067601 GTCCACGAAAACTTGTCCCAAAT 59.932 43.478 0.00 0.00 0.00 2.32
2825 3322 3.702045 TCCACGAAAACTTGTCCCAAATT 59.298 39.130 0.00 0.00 0.00 1.82
2826 3323 4.160626 TCCACGAAAACTTGTCCCAAATTT 59.839 37.500 0.00 0.00 0.00 1.82
2827 3324 5.360144 TCCACGAAAACTTGTCCCAAATTTA 59.640 36.000 0.00 0.00 0.00 1.40
2828 3325 6.041069 TCCACGAAAACTTGTCCCAAATTTAT 59.959 34.615 0.00 0.00 0.00 1.40
2829 3326 6.364976 CCACGAAAACTTGTCCCAAATTTATC 59.635 38.462 0.00 0.00 0.00 1.75
2830 3327 7.145323 CACGAAAACTTGTCCCAAATTTATCT 58.855 34.615 0.00 0.00 0.00 1.98
2831 3328 7.326063 CACGAAAACTTGTCCCAAATTTATCTC 59.674 37.037 0.00 0.00 0.00 2.75
2832 3329 7.230712 ACGAAAACTTGTCCCAAATTTATCTCT 59.769 33.333 0.00 0.00 0.00 3.10
2833 3330 7.750903 CGAAAACTTGTCCCAAATTTATCTCTC 59.249 37.037 0.00 0.00 0.00 3.20
2834 3331 8.477419 AAAACTTGTCCCAAATTTATCTCTCA 57.523 30.769 0.00 0.00 0.00 3.27
2835 3332 8.477419 AAACTTGTCCCAAATTTATCTCTCAA 57.523 30.769 0.00 0.00 0.00 3.02
2836 3333 8.477419 AACTTGTCCCAAATTTATCTCTCAAA 57.523 30.769 0.00 0.00 0.00 2.69
2837 3334 8.655935 ACTTGTCCCAAATTTATCTCTCAAAT 57.344 30.769 0.00 0.00 0.00 2.32
2838 3335 8.526147 ACTTGTCCCAAATTTATCTCTCAAATG 58.474 33.333 0.00 0.00 0.00 2.32
2839 3336 7.408756 TGTCCCAAATTTATCTCTCAAATGG 57.591 36.000 0.00 0.00 0.00 3.16
2840 3337 7.181361 TGTCCCAAATTTATCTCTCAAATGGA 58.819 34.615 0.00 0.00 0.00 3.41
2841 3338 7.840716 TGTCCCAAATTTATCTCTCAAATGGAT 59.159 33.333 0.00 0.00 0.00 3.41
2842 3339 9.354673 GTCCCAAATTTATCTCTCAAATGGATA 57.645 33.333 0.00 0.00 0.00 2.59
2853 3350 8.427902 TCTCTCAAATGGATATATGTAGCACT 57.572 34.615 0.00 0.00 0.00 4.40
2854 3351 9.533831 TCTCTCAAATGGATATATGTAGCACTA 57.466 33.333 0.00 0.00 0.00 2.74
2856 3353 9.929180 TCTCAAATGGATATATGTAGCACTAAC 57.071 33.333 0.00 0.00 0.00 2.34
2857 3354 9.935241 CTCAAATGGATATATGTAGCACTAACT 57.065 33.333 0.00 0.00 0.00 2.24
2862 3359 9.881649 ATGGATATATGTAGCACTAACTTGATG 57.118 33.333 0.00 0.00 0.00 3.07
2863 3360 8.314021 TGGATATATGTAGCACTAACTTGATGG 58.686 37.037 0.00 0.00 0.00 3.51
2864 3361 8.314751 GGATATATGTAGCACTAACTTGATGGT 58.685 37.037 0.00 0.00 0.00 3.55
2867 3364 6.791867 ATGTAGCACTAACTTGATGGTAGA 57.208 37.500 0.00 0.00 38.19 2.59
2868 3365 6.791867 TGTAGCACTAACTTGATGGTAGAT 57.208 37.500 0.00 0.00 38.19 1.98
2869 3366 7.891498 TGTAGCACTAACTTGATGGTAGATA 57.109 36.000 0.00 0.00 38.19 1.98
2870 3367 7.713750 TGTAGCACTAACTTGATGGTAGATAC 58.286 38.462 0.00 0.00 38.19 2.24
2871 3368 6.791867 AGCACTAACTTGATGGTAGATACA 57.208 37.500 0.00 0.00 38.19 2.29
2872 3369 7.366847 AGCACTAACTTGATGGTAGATACAT 57.633 36.000 0.00 0.00 38.19 2.29
2873 3370 7.437748 AGCACTAACTTGATGGTAGATACATC 58.562 38.462 0.00 0.00 43.82 3.06
2885 3382 9.202273 GATGGTAGATACATCAATTTGAGAGAC 57.798 37.037 5.21 0.00 43.21 3.36
2886 3383 8.078060 TGGTAGATACATCAATTTGAGAGACA 57.922 34.615 5.21 0.00 0.00 3.41
2887 3384 8.539544 TGGTAGATACATCAATTTGAGAGACAA 58.460 33.333 5.21 0.00 36.65 3.18
2888 3385 8.821894 GGTAGATACATCAATTTGAGAGACAAC 58.178 37.037 5.21 0.00 38.29 3.32
2889 3386 7.856145 AGATACATCAATTTGAGAGACAACC 57.144 36.000 5.21 0.00 38.29 3.77
2890 3387 7.628234 AGATACATCAATTTGAGAGACAACCT 58.372 34.615 5.21 0.00 38.29 3.50
2891 3388 8.105829 AGATACATCAATTTGAGAGACAACCTT 58.894 33.333 5.21 0.00 38.29 3.50
2892 3389 6.966534 ACATCAATTTGAGAGACAACCTTT 57.033 33.333 5.21 0.00 38.29 3.11
2893 3390 7.352079 ACATCAATTTGAGAGACAACCTTTT 57.648 32.000 5.21 0.00 38.29 2.27
2894 3391 7.785033 ACATCAATTTGAGAGACAACCTTTTT 58.215 30.769 5.21 0.00 38.29 1.94
2895 3392 7.922811 ACATCAATTTGAGAGACAACCTTTTTC 59.077 33.333 5.21 0.00 38.29 2.29
2896 3393 6.494842 TCAATTTGAGAGACAACCTTTTTCG 58.505 36.000 0.00 0.00 38.29 3.46
2897 3394 6.317642 TCAATTTGAGAGACAACCTTTTTCGA 59.682 34.615 0.00 0.00 38.29 3.71
2898 3395 6.693315 ATTTGAGAGACAACCTTTTTCGAA 57.307 33.333 0.00 0.00 38.29 3.71
2899 3396 5.479716 TTGAGAGACAACCTTTTTCGAAC 57.520 39.130 0.00 0.00 33.18 3.95
2900 3397 3.554324 TGAGAGACAACCTTTTTCGAACG 59.446 43.478 0.00 0.00 0.00 3.95
2901 3398 2.870411 AGAGACAACCTTTTTCGAACGG 59.130 45.455 0.00 1.20 0.00 4.44
2902 3399 2.867975 GAGACAACCTTTTTCGAACGGA 59.132 45.455 12.74 0.00 0.00 4.69
2903 3400 2.870411 AGACAACCTTTTTCGAACGGAG 59.130 45.455 12.74 4.87 0.00 4.63
2904 3401 1.944709 ACAACCTTTTTCGAACGGAGG 59.055 47.619 15.49 15.49 0.00 4.30
2905 3402 1.265905 CAACCTTTTTCGAACGGAGGG 59.734 52.381 19.26 11.76 0.00 4.30
2981 3491 7.121168 TGTGGTTTGAGATATTGAAAGGATGAC 59.879 37.037 0.00 0.00 0.00 3.06
2987 3497 8.455903 TGAGATATTGAAAGGATGACATTTCC 57.544 34.615 0.00 0.00 43.34 3.13
3068 3603 9.034544 GCCAAACATGTATCCTTATTTCATTTC 57.965 33.333 0.00 0.00 0.00 2.17
3069 3604 9.533253 CCAAACATGTATCCTTATTTCATTTCC 57.467 33.333 0.00 0.00 0.00 3.13
3125 5203 9.787435 ACTCTCCACATGTAAAAATACTTTGTA 57.213 29.630 0.00 0.00 0.00 2.41
3130 5209 9.620660 CCACATGTAAAAATACTTTGTAGTTCC 57.379 33.333 0.00 0.00 35.78 3.62
3187 5363 8.462589 ACTACCTCCGTACCAAAATTTAAAAA 57.537 30.769 0.00 0.00 0.00 1.94
3188 5364 9.081204 ACTACCTCCGTACCAAAATTTAAAAAT 57.919 29.630 0.00 0.00 0.00 1.82
3189 5365 9.349145 CTACCTCCGTACCAAAATTTAAAAATG 57.651 33.333 0.00 0.00 0.00 2.32
3190 5366 7.728148 ACCTCCGTACCAAAATTTAAAAATGT 58.272 30.769 0.00 0.00 0.00 2.71
3191 5367 8.205512 ACCTCCGTACCAAAATTTAAAAATGTT 58.794 29.630 0.00 0.00 0.00 2.71
3192 5368 9.047371 CCTCCGTACCAAAATTTAAAAATGTTT 57.953 29.630 0.00 0.00 0.00 2.83
3218 5394 9.772973 TTTGTATGCTAAACTAACTTCAAGAGA 57.227 29.630 0.00 0.00 0.00 3.10
3219 5395 8.758633 TGTATGCTAAACTAACTTCAAGAGAC 57.241 34.615 0.00 0.00 0.00 3.36
3236 5444 9.653287 TTCAAGAGACGTCTTACATTTTGATAT 57.347 29.630 21.08 0.00 41.40 1.63
3340 5548 6.036191 GCTGAACTATCAACTGTAGCTAAACC 59.964 42.308 0.00 0.00 34.49 3.27
3360 5568 3.830755 ACCACCGACTGTATGTAGACTTT 59.169 43.478 0.00 0.00 0.00 2.66
3373 5581 1.322442 AGACTTTGAAGCTTGCCACC 58.678 50.000 2.10 0.00 0.00 4.61
3384 5592 1.068127 GCTTGCCACCATCCATGAATC 59.932 52.381 0.00 0.00 0.00 2.52
3436 5646 7.470424 GCATTATGATTTAGCTGGATTTCACCA 60.470 37.037 0.00 0.00 38.33 4.17
3494 5704 5.080969 TCTTTGGATCGACGAATTAACCT 57.919 39.130 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.279708 CCATAAATCGAGCCTCCTACTGAAT 60.280 44.000 0.00 0.00 0.00 2.57
1 2 4.039245 CCATAAATCGAGCCTCCTACTGAA 59.961 45.833 0.00 0.00 0.00 3.02
2 3 3.574396 CCATAAATCGAGCCTCCTACTGA 59.426 47.826 0.00 0.00 0.00 3.41
3 4 3.306364 CCCATAAATCGAGCCTCCTACTG 60.306 52.174 0.00 0.00 0.00 2.74
4 5 2.900546 CCCATAAATCGAGCCTCCTACT 59.099 50.000 0.00 0.00 0.00 2.57
5 6 2.613223 GCCCATAAATCGAGCCTCCTAC 60.613 54.545 0.00 0.00 0.00 3.18
6 7 1.623811 GCCCATAAATCGAGCCTCCTA 59.376 52.381 0.00 0.00 0.00 2.94
7 8 0.398318 GCCCATAAATCGAGCCTCCT 59.602 55.000 0.00 0.00 0.00 3.69
8 9 0.398318 AGCCCATAAATCGAGCCTCC 59.602 55.000 0.00 0.00 0.00 4.30
9 10 3.067833 GTTAGCCCATAAATCGAGCCTC 58.932 50.000 0.00 0.00 0.00 4.70
10 11 2.224548 GGTTAGCCCATAAATCGAGCCT 60.225 50.000 0.00 0.00 0.00 4.58
11 12 2.152016 GGTTAGCCCATAAATCGAGCC 58.848 52.381 0.00 0.00 0.00 4.70
24 25 2.808906 ACAAGATGAAGGGGTTAGCC 57.191 50.000 0.00 0.00 0.00 3.93
25 26 3.691609 CAGAACAAGATGAAGGGGTTAGC 59.308 47.826 0.00 0.00 0.00 3.09
26 27 3.691609 GCAGAACAAGATGAAGGGGTTAG 59.308 47.826 0.00 0.00 0.00 2.34
27 28 3.330701 AGCAGAACAAGATGAAGGGGTTA 59.669 43.478 0.00 0.00 0.00 2.85
28 29 2.108952 AGCAGAACAAGATGAAGGGGTT 59.891 45.455 0.00 0.00 0.00 4.11
29 30 1.707427 AGCAGAACAAGATGAAGGGGT 59.293 47.619 0.00 0.00 0.00 4.95
30 31 2.363683 GAGCAGAACAAGATGAAGGGG 58.636 52.381 0.00 0.00 0.00 4.79
31 32 2.026449 AGGAGCAGAACAAGATGAAGGG 60.026 50.000 0.00 0.00 0.00 3.95
32 33 3.008330 CAGGAGCAGAACAAGATGAAGG 58.992 50.000 0.00 0.00 0.00 3.46
33 34 2.419324 GCAGGAGCAGAACAAGATGAAG 59.581 50.000 0.00 0.00 41.58 3.02
34 35 2.430465 GCAGGAGCAGAACAAGATGAA 58.570 47.619 0.00 0.00 41.58 2.57
35 36 2.105006 GCAGGAGCAGAACAAGATGA 57.895 50.000 0.00 0.00 41.58 2.92
66 67 5.661670 TACAAGATGTAACTCGCAACAGCG 61.662 45.833 3.10 3.10 40.36 5.18
67 68 2.480419 ACAAGATGTAACTCGCAACAGC 59.520 45.455 0.00 0.00 32.26 4.40
68 69 5.839262 TTACAAGATGTAACTCGCAACAG 57.161 39.130 0.00 0.00 37.86 3.16
69 70 6.425417 TCAATTACAAGATGTAACTCGCAACA 59.575 34.615 5.17 0.00 44.54 3.33
70 71 6.827641 TCAATTACAAGATGTAACTCGCAAC 58.172 36.000 5.17 0.00 44.54 4.17
71 72 7.609760 ATCAATTACAAGATGTAACTCGCAA 57.390 32.000 5.17 0.00 44.54 4.85
72 73 8.710835 TTATCAATTACAAGATGTAACTCGCA 57.289 30.769 5.17 0.00 44.54 5.10
73 74 9.422196 GTTTATCAATTACAAGATGTAACTCGC 57.578 33.333 5.17 0.00 44.54 5.03
74 75 9.916397 GGTTTATCAATTACAAGATGTAACTCG 57.084 33.333 5.17 0.00 44.54 4.18
79 80 9.832445 GGAGAGGTTTATCAATTACAAGATGTA 57.168 33.333 0.00 0.00 0.00 2.29
80 81 7.775561 GGGAGAGGTTTATCAATTACAAGATGT 59.224 37.037 0.00 0.00 0.00 3.06
81 82 7.995488 AGGGAGAGGTTTATCAATTACAAGATG 59.005 37.037 0.00 0.00 0.00 2.90
82 83 8.107196 AGGGAGAGGTTTATCAATTACAAGAT 57.893 34.615 0.00 0.00 0.00 2.40
83 84 7.510675 AGGGAGAGGTTTATCAATTACAAGA 57.489 36.000 0.00 0.00 0.00 3.02
84 85 7.715686 GGTAGGGAGAGGTTTATCAATTACAAG 59.284 40.741 0.00 0.00 0.00 3.16
85 86 7.183112 TGGTAGGGAGAGGTTTATCAATTACAA 59.817 37.037 0.00 0.00 0.00 2.41
86 87 6.674861 TGGTAGGGAGAGGTTTATCAATTACA 59.325 38.462 0.00 0.00 0.00 2.41
87 88 7.133133 TGGTAGGGAGAGGTTTATCAATTAC 57.867 40.000 0.00 0.00 0.00 1.89
88 89 7.758820 TTGGTAGGGAGAGGTTTATCAATTA 57.241 36.000 0.00 0.00 0.00 1.40
89 90 6.652205 TTGGTAGGGAGAGGTTTATCAATT 57.348 37.500 0.00 0.00 0.00 2.32
90 91 6.389869 TCATTGGTAGGGAGAGGTTTATCAAT 59.610 38.462 0.00 0.00 29.36 2.57
91 92 5.729229 TCATTGGTAGGGAGAGGTTTATCAA 59.271 40.000 0.00 0.00 0.00 2.57
92 93 5.285401 TCATTGGTAGGGAGAGGTTTATCA 58.715 41.667 0.00 0.00 0.00 2.15
93 94 5.888982 TCATTGGTAGGGAGAGGTTTATC 57.111 43.478 0.00 0.00 0.00 1.75
94 95 6.652205 TTTCATTGGTAGGGAGAGGTTTAT 57.348 37.500 0.00 0.00 0.00 1.40
95 96 6.216662 TCATTTCATTGGTAGGGAGAGGTTTA 59.783 38.462 0.00 0.00 0.00 2.01
96 97 5.015178 TCATTTCATTGGTAGGGAGAGGTTT 59.985 40.000 0.00 0.00 0.00 3.27
97 98 4.540099 TCATTTCATTGGTAGGGAGAGGTT 59.460 41.667 0.00 0.00 0.00 3.50
98 99 4.111577 TCATTTCATTGGTAGGGAGAGGT 58.888 43.478 0.00 0.00 0.00 3.85
99 100 4.778213 TCATTTCATTGGTAGGGAGAGG 57.222 45.455 0.00 0.00 0.00 3.69
100 101 6.830912 TGTATCATTTCATTGGTAGGGAGAG 58.169 40.000 0.00 0.00 0.00 3.20
101 102 6.823286 TGTATCATTTCATTGGTAGGGAGA 57.177 37.500 0.00 0.00 0.00 3.71
102 103 9.745018 ATTATGTATCATTTCATTGGTAGGGAG 57.255 33.333 0.00 0.00 0.00 4.30
107 108 9.676195 CGCAAATTATGTATCATTTCATTGGTA 57.324 29.630 0.00 0.00 0.00 3.25
108 109 8.196771 ACGCAAATTATGTATCATTTCATTGGT 58.803 29.630 0.00 0.00 0.00 3.67
109 110 8.578308 ACGCAAATTATGTATCATTTCATTGG 57.422 30.769 0.00 0.00 0.00 3.16
146 147 9.182214 TGGAGAGTATCGTGTATAGTTAAGTTT 57.818 33.333 0.00 0.00 42.67 2.66
147 148 8.619546 GTGGAGAGTATCGTGTATAGTTAAGTT 58.380 37.037 0.00 0.00 42.67 2.66
148 149 7.772292 TGTGGAGAGTATCGTGTATAGTTAAGT 59.228 37.037 0.00 0.00 42.67 2.24
149 150 8.151141 TGTGGAGAGTATCGTGTATAGTTAAG 57.849 38.462 0.00 0.00 42.67 1.85
150 151 8.687292 ATGTGGAGAGTATCGTGTATAGTTAA 57.313 34.615 0.00 0.00 42.67 2.01
151 152 7.935210 TGATGTGGAGAGTATCGTGTATAGTTA 59.065 37.037 0.00 0.00 42.67 2.24
152 153 6.771267 TGATGTGGAGAGTATCGTGTATAGTT 59.229 38.462 0.00 0.00 42.67 2.24
153 154 6.296803 TGATGTGGAGAGTATCGTGTATAGT 58.703 40.000 0.00 0.00 42.67 2.12
154 155 6.803154 TGATGTGGAGAGTATCGTGTATAG 57.197 41.667 0.00 0.00 42.67 1.31
155 156 7.067737 TGTTTGATGTGGAGAGTATCGTGTATA 59.932 37.037 0.00 0.00 42.67 1.47
156 157 6.127451 TGTTTGATGTGGAGAGTATCGTGTAT 60.127 38.462 0.00 0.00 42.67 2.29
157 158 5.184287 TGTTTGATGTGGAGAGTATCGTGTA 59.816 40.000 0.00 0.00 42.67 2.90
158 159 4.021456 TGTTTGATGTGGAGAGTATCGTGT 60.021 41.667 0.00 0.00 42.67 4.49
159 160 4.494484 TGTTTGATGTGGAGAGTATCGTG 58.506 43.478 0.00 0.00 42.67 4.35
160 161 4.801330 TGTTTGATGTGGAGAGTATCGT 57.199 40.909 0.00 0.00 42.67 3.73
161 162 4.025396 GCATGTTTGATGTGGAGAGTATCG 60.025 45.833 0.00 0.00 42.67 2.92
162 163 4.274459 GGCATGTTTGATGTGGAGAGTATC 59.726 45.833 0.00 0.00 0.00 2.24
163 164 4.080129 AGGCATGTTTGATGTGGAGAGTAT 60.080 41.667 0.00 0.00 0.00 2.12
164 165 3.264193 AGGCATGTTTGATGTGGAGAGTA 59.736 43.478 0.00 0.00 0.00 2.59
165 166 2.040813 AGGCATGTTTGATGTGGAGAGT 59.959 45.455 0.00 0.00 0.00 3.24
166 167 2.719739 AGGCATGTTTGATGTGGAGAG 58.280 47.619 0.00 0.00 0.00 3.20
167 168 2.885135 AGGCATGTTTGATGTGGAGA 57.115 45.000 0.00 0.00 0.00 3.71
168 169 2.821378 TGAAGGCATGTTTGATGTGGAG 59.179 45.455 0.00 0.00 0.00 3.86
169 170 2.874014 TGAAGGCATGTTTGATGTGGA 58.126 42.857 0.00 0.00 0.00 4.02
170 171 3.663995 TTGAAGGCATGTTTGATGTGG 57.336 42.857 0.00 0.00 0.00 4.17
171 172 3.430895 GCTTTGAAGGCATGTTTGATGTG 59.569 43.478 0.00 0.00 0.00 3.21
172 173 3.069872 TGCTTTGAAGGCATGTTTGATGT 59.930 39.130 0.00 0.00 34.56 3.06
173 174 3.655486 TGCTTTGAAGGCATGTTTGATG 58.345 40.909 0.00 0.00 34.56 3.07
174 175 4.546829 ATGCTTTGAAGGCATGTTTGAT 57.453 36.364 14.21 0.00 46.85 2.57
182 183 2.543445 CGTGTTTCATGCTTTGAAGGCA 60.543 45.455 3.98 3.98 44.90 4.75
183 184 2.053627 CGTGTTTCATGCTTTGAAGGC 58.946 47.619 0.00 0.00 44.90 4.35
184 185 3.300009 GTCGTGTTTCATGCTTTGAAGG 58.700 45.455 3.47 0.00 44.90 3.46
185 186 2.966708 CGTCGTGTTTCATGCTTTGAAG 59.033 45.455 3.47 0.00 44.90 3.02
186 187 2.286713 CCGTCGTGTTTCATGCTTTGAA 60.287 45.455 0.00 0.00 42.62 2.69
187 188 1.262950 CCGTCGTGTTTCATGCTTTGA 59.737 47.619 0.00 0.00 0.00 2.69
188 189 1.662876 CCCGTCGTGTTTCATGCTTTG 60.663 52.381 0.00 0.00 0.00 2.77
189 190 0.591170 CCCGTCGTGTTTCATGCTTT 59.409 50.000 0.00 0.00 0.00 3.51
190 191 1.234615 CCCCGTCGTGTTTCATGCTT 61.235 55.000 0.00 0.00 0.00 3.91
191 192 1.671054 CCCCGTCGTGTTTCATGCT 60.671 57.895 0.00 0.00 0.00 3.79
192 193 2.867472 CCCCGTCGTGTTTCATGC 59.133 61.111 0.00 0.00 0.00 4.06
193 194 1.671054 AGCCCCGTCGTGTTTCATG 60.671 57.895 0.00 0.00 0.00 3.07
194 195 1.671054 CAGCCCCGTCGTGTTTCAT 60.671 57.895 0.00 0.00 0.00 2.57
195 196 2.280524 CAGCCCCGTCGTGTTTCA 60.281 61.111 0.00 0.00 0.00 2.69
196 197 3.047877 CCAGCCCCGTCGTGTTTC 61.048 66.667 0.00 0.00 0.00 2.78
203 204 4.038080 CAAAACGCCAGCCCCGTC 62.038 66.667 0.00 0.00 38.06 4.79
207 208 4.056125 GAGCCAAAACGCCAGCCC 62.056 66.667 0.00 0.00 0.00 5.19
208 209 4.056125 GGAGCCAAAACGCCAGCC 62.056 66.667 0.00 0.00 0.00 4.85
209 210 4.056125 GGGAGCCAAAACGCCAGC 62.056 66.667 0.00 0.00 0.00 4.85
210 211 3.737172 CGGGAGCCAAAACGCCAG 61.737 66.667 0.00 0.00 0.00 4.85
214 215 2.741486 TTCTCCCGGGAGCCAAAACG 62.741 60.000 40.97 19.91 41.71 3.60
215 216 1.074248 TTCTCCCGGGAGCCAAAAC 59.926 57.895 40.97 0.00 41.71 2.43
216 217 1.074248 GTTCTCCCGGGAGCCAAAA 59.926 57.895 40.97 28.39 41.71 2.44
217 218 2.124507 CTGTTCTCCCGGGAGCCAAA 62.125 60.000 40.97 28.74 41.71 3.28
218 219 2.528127 TGTTCTCCCGGGAGCCAA 60.528 61.111 40.97 29.44 41.71 4.52
219 220 2.449967 TACTGTTCTCCCGGGAGCCA 62.450 60.000 40.97 34.48 41.71 4.75
220 221 1.262640 TTACTGTTCTCCCGGGAGCC 61.263 60.000 40.97 32.23 41.71 4.70
221 222 0.108281 GTTACTGTTCTCCCGGGAGC 60.108 60.000 40.97 29.33 41.71 4.70
222 223 0.172803 CGTTACTGTTCTCCCGGGAG 59.827 60.000 40.33 40.33 43.21 4.30
223 224 1.880819 GCGTTACTGTTCTCCCGGGA 61.881 60.000 25.06 25.06 0.00 5.14
224 225 1.447314 GCGTTACTGTTCTCCCGGG 60.447 63.158 16.85 16.85 0.00 5.73
225 226 1.804326 CGCGTTACTGTTCTCCCGG 60.804 63.158 0.00 0.00 0.00 5.73
226 227 0.387622 TTCGCGTTACTGTTCTCCCG 60.388 55.000 5.77 0.00 0.00 5.14
227 228 1.787012 TTTCGCGTTACTGTTCTCCC 58.213 50.000 5.77 0.00 0.00 4.30
228 229 3.865224 TTTTTCGCGTTACTGTTCTCC 57.135 42.857 5.77 0.00 0.00 3.71
281 282 8.765219 GCGACACTAATACAATCATCTACAAAT 58.235 33.333 0.00 0.00 0.00 2.32
282 283 7.762159 TGCGACACTAATACAATCATCTACAAA 59.238 33.333 0.00 0.00 0.00 2.83
283 284 7.262048 TGCGACACTAATACAATCATCTACAA 58.738 34.615 0.00 0.00 0.00 2.41
284 285 6.801575 TGCGACACTAATACAATCATCTACA 58.198 36.000 0.00 0.00 0.00 2.74
285 286 7.113684 GTCTGCGACACTAATACAATCATCTAC 59.886 40.741 4.20 0.00 32.09 2.59
286 287 7.139392 GTCTGCGACACTAATACAATCATCTA 58.861 38.462 4.20 0.00 32.09 1.98
287 288 5.980116 GTCTGCGACACTAATACAATCATCT 59.020 40.000 4.20 0.00 32.09 2.90
288 289 5.748630 TGTCTGCGACACTAATACAATCATC 59.251 40.000 7.20 0.00 37.67 2.92
289 290 5.660460 TGTCTGCGACACTAATACAATCAT 58.340 37.500 7.20 0.00 37.67 2.45
290 291 5.066968 TGTCTGCGACACTAATACAATCA 57.933 39.130 7.20 0.00 37.67 2.57
291 292 5.557136 GCATGTCTGCGACACTAATACAATC 60.557 44.000 12.43 0.00 45.65 2.67
292 293 4.271049 GCATGTCTGCGACACTAATACAAT 59.729 41.667 12.43 0.00 45.65 2.71
293 294 3.616821 GCATGTCTGCGACACTAATACAA 59.383 43.478 12.43 0.00 45.65 2.41
294 295 3.186909 GCATGTCTGCGACACTAATACA 58.813 45.455 12.43 0.00 45.65 2.29
295 296 3.843426 GCATGTCTGCGACACTAATAC 57.157 47.619 12.43 0.00 45.65 1.89
306 307 5.220397 CATGAAAATTGTCATGCATGTCTGC 60.220 40.000 22.60 14.53 46.14 4.26
307 308 6.331170 CATGAAAATTGTCATGCATGTCTG 57.669 37.500 22.60 8.56 46.14 3.51
316 317 3.119029 CCGCTTCCCATGAAAATTGTCAT 60.119 43.478 5.20 5.20 38.84 3.06
317 318 2.230992 CCGCTTCCCATGAAAATTGTCA 59.769 45.455 0.00 0.00 0.00 3.58
318 319 2.491693 TCCGCTTCCCATGAAAATTGTC 59.508 45.455 0.00 0.00 0.00 3.18
319 320 2.493278 CTCCGCTTCCCATGAAAATTGT 59.507 45.455 0.00 0.00 0.00 2.71
320 321 2.736400 GCTCCGCTTCCCATGAAAATTG 60.736 50.000 0.00 0.00 0.00 2.32
321 322 1.478105 GCTCCGCTTCCCATGAAAATT 59.522 47.619 0.00 0.00 0.00 1.82
322 323 1.106285 GCTCCGCTTCCCATGAAAAT 58.894 50.000 0.00 0.00 0.00 1.82
323 324 1.305219 CGCTCCGCTTCCCATGAAAA 61.305 55.000 0.00 0.00 0.00 2.29
324 325 1.745115 CGCTCCGCTTCCCATGAAA 60.745 57.895 0.00 0.00 0.00 2.69
325 326 2.125147 CGCTCCGCTTCCCATGAA 60.125 61.111 0.00 0.00 0.00 2.57
326 327 4.161295 CCGCTCCGCTTCCCATGA 62.161 66.667 0.00 0.00 0.00 3.07
336 337 4.383602 CAAAACACCGCCGCTCCG 62.384 66.667 0.00 0.00 0.00 4.63
337 338 3.249973 GACAAAACACCGCCGCTCC 62.250 63.158 0.00 0.00 0.00 4.70
338 339 2.251371 GACAAAACACCGCCGCTC 59.749 61.111 0.00 0.00 0.00 5.03
339 340 3.645975 CGACAAAACACCGCCGCT 61.646 61.111 0.00 0.00 0.00 5.52
340 341 4.676586 CCGACAAAACACCGCCGC 62.677 66.667 0.00 0.00 0.00 6.53
341 342 4.676586 GCCGACAAAACACCGCCG 62.677 66.667 0.00 0.00 0.00 6.46
342 343 4.337060 GGCCGACAAAACACCGCC 62.337 66.667 0.00 0.00 0.00 6.13
343 344 4.337060 GGGCCGACAAAACACCGC 62.337 66.667 0.00 0.00 0.00 5.68
344 345 2.005960 TTTGGGCCGACAAAACACCG 62.006 55.000 4.84 0.00 37.40 4.94
345 346 0.175989 TTTTGGGCCGACAAAACACC 59.824 50.000 13.89 0.00 43.26 4.16
346 347 2.011540 TTTTTGGGCCGACAAAACAC 57.988 45.000 16.62 0.00 46.52 3.32
373 374 8.927411 CCAAAAGTTATCCCAAAATATCATCCT 58.073 33.333 0.00 0.00 0.00 3.24
374 375 8.704668 ACCAAAAGTTATCCCAAAATATCATCC 58.295 33.333 0.00 0.00 0.00 3.51
375 376 9.533253 CACCAAAAGTTATCCCAAAATATCATC 57.467 33.333 0.00 0.00 0.00 2.92
376 377 9.045745 ACACCAAAAGTTATCCCAAAATATCAT 57.954 29.630 0.00 0.00 0.00 2.45
377 378 8.429237 ACACCAAAAGTTATCCCAAAATATCA 57.571 30.769 0.00 0.00 0.00 2.15
378 379 9.150348 CAACACCAAAAGTTATCCCAAAATATC 57.850 33.333 0.00 0.00 0.00 1.63
379 380 8.100164 CCAACACCAAAAGTTATCCCAAAATAT 58.900 33.333 0.00 0.00 0.00 1.28
380 381 7.290248 TCCAACACCAAAAGTTATCCCAAAATA 59.710 33.333 0.00 0.00 0.00 1.40
381 382 6.100424 TCCAACACCAAAAGTTATCCCAAAAT 59.900 34.615 0.00 0.00 0.00 1.82
382 383 5.425539 TCCAACACCAAAAGTTATCCCAAAA 59.574 36.000 0.00 0.00 0.00 2.44
383 384 4.962995 TCCAACACCAAAAGTTATCCCAAA 59.037 37.500 0.00 0.00 0.00 3.28
384 385 4.547671 TCCAACACCAAAAGTTATCCCAA 58.452 39.130 0.00 0.00 0.00 4.12
385 386 4.141135 TCTCCAACACCAAAAGTTATCCCA 60.141 41.667 0.00 0.00 0.00 4.37
386 387 4.403734 TCTCCAACACCAAAAGTTATCCC 58.596 43.478 0.00 0.00 0.00 3.85
387 388 4.082733 GCTCTCCAACACCAAAAGTTATCC 60.083 45.833 0.00 0.00 0.00 2.59
388 389 4.378459 CGCTCTCCAACACCAAAAGTTATC 60.378 45.833 0.00 0.00 0.00 1.75
389 390 3.502211 CGCTCTCCAACACCAAAAGTTAT 59.498 43.478 0.00 0.00 0.00 1.89
390 391 2.875933 CGCTCTCCAACACCAAAAGTTA 59.124 45.455 0.00 0.00 0.00 2.24
391 392 1.676006 CGCTCTCCAACACCAAAAGTT 59.324 47.619 0.00 0.00 0.00 2.66
392 393 1.308998 CGCTCTCCAACACCAAAAGT 58.691 50.000 0.00 0.00 0.00 2.66
393 394 0.593128 CCGCTCTCCAACACCAAAAG 59.407 55.000 0.00 0.00 0.00 2.27
394 395 0.181587 TCCGCTCTCCAACACCAAAA 59.818 50.000 0.00 0.00 0.00 2.44
395 396 0.250295 CTCCGCTCTCCAACACCAAA 60.250 55.000 0.00 0.00 0.00 3.28
396 397 1.371183 CTCCGCTCTCCAACACCAA 59.629 57.895 0.00 0.00 0.00 3.67
397 398 3.059982 CTCCGCTCTCCAACACCA 58.940 61.111 0.00 0.00 0.00 4.17
398 399 2.435059 GCTCCGCTCTCCAACACC 60.435 66.667 0.00 0.00 0.00 4.16
399 400 2.811317 CGCTCCGCTCTCCAACAC 60.811 66.667 0.00 0.00 0.00 3.32
400 401 4.069232 CCGCTCCGCTCTCCAACA 62.069 66.667 0.00 0.00 0.00 3.33
410 411 3.656045 AAAAACACCGCCGCTCCG 61.656 61.111 0.00 0.00 0.00 4.63
429 430 7.435192 AGAAAAAGATGCTTTCACGGTAAAAAG 59.565 33.333 9.60 9.60 35.62 2.27
437 438 4.023707 ACAGGAGAAAAAGATGCTTTCACG 60.024 41.667 0.00 0.00 35.62 4.35
463 469 0.918619 CCGTTGGTGCTACGTTATCG 59.081 55.000 0.00 0.00 43.34 2.92
505 511 9.968743 GATTAGTTTTGGACTGATTTACGTTAG 57.031 33.333 0.00 0.00 39.48 2.34
512 518 6.598064 CGTAGGGATTAGTTTTGGACTGATTT 59.402 38.462 0.00 0.00 39.48 2.17
515 522 5.080969 CGTAGGGATTAGTTTTGGACTGA 57.919 43.478 0.00 0.00 39.48 3.41
534 541 4.575236 TGTTTAGTCAAATGTTGTGCCGTA 59.425 37.500 0.00 0.00 0.00 4.02
551 558 2.265589 ACCCGACCCTGTTTGTTTAG 57.734 50.000 0.00 0.00 0.00 1.85
558 565 3.007323 GGGCTACCCGACCCTGTT 61.007 66.667 0.00 0.00 43.36 3.16
567 574 1.446618 CGTACGTGTTGGGCTACCC 60.447 63.158 7.22 0.00 45.71 3.69
674 702 3.271153 AGTGGGAGTAGTAGTTTGGGT 57.729 47.619 0.00 0.00 0.00 4.51
675 703 3.581332 TGAAGTGGGAGTAGTAGTTTGGG 59.419 47.826 0.00 0.00 0.00 4.12
676 704 4.283722 AGTGAAGTGGGAGTAGTAGTTTGG 59.716 45.833 0.00 0.00 0.00 3.28
678 706 4.283722 CCAGTGAAGTGGGAGTAGTAGTTT 59.716 45.833 0.00 0.00 33.46 2.66
679 707 3.833070 CCAGTGAAGTGGGAGTAGTAGTT 59.167 47.826 0.00 0.00 33.46 2.24
694 725 1.671742 GCTCTCGAACCCCAGTGAA 59.328 57.895 0.00 0.00 0.00 3.18
808 844 1.641192 GAAGGGGTGGAAGGAAGGAAT 59.359 52.381 0.00 0.00 0.00 3.01
819 855 4.148825 CGCGGAGAGAAGGGGTGG 62.149 72.222 0.00 0.00 0.00 4.61
820 856 3.382832 ACGCGGAGAGAAGGGGTG 61.383 66.667 12.47 0.00 0.00 4.61
821 857 3.382832 CACGCGGAGAGAAGGGGT 61.383 66.667 12.47 0.00 0.00 4.95
822 858 4.821589 GCACGCGGAGAGAAGGGG 62.822 72.222 12.47 0.00 0.00 4.79
823 859 4.821589 GGCACGCGGAGAGAAGGG 62.822 72.222 12.47 0.00 0.00 3.95
857 897 3.008517 TTGCTGGATGGAGGCGGA 61.009 61.111 0.00 0.00 0.00 5.54
861 901 1.225704 GAGGGTTGCTGGATGGAGG 59.774 63.158 0.00 0.00 0.00 4.30
873 913 3.394836 GAGAGGGCTGCGAGGGTT 61.395 66.667 0.00 0.00 0.00 4.11
893 933 1.609072 CGAGCAAGTATCGATCCTCCA 59.391 52.381 0.00 0.00 42.76 3.86
964 1010 1.140052 TGGCTATATGGTGGTGGAACG 59.860 52.381 0.00 0.00 38.12 3.95
976 1022 9.988815 CATCTAAGTAGAGTTTTGTGGCTATAT 57.011 33.333 0.00 0.00 35.50 0.86
977 1023 9.197306 TCATCTAAGTAGAGTTTTGTGGCTATA 57.803 33.333 0.00 0.00 35.50 1.31
1204 1250 1.066573 CACCATCTCACTCCACAGACC 60.067 57.143 0.00 0.00 0.00 3.85
1205 1251 1.066573 CCACCATCTCACTCCACAGAC 60.067 57.143 0.00 0.00 0.00 3.51
1214 1260 1.690219 ATCCTCCGCCACCATCTCAC 61.690 60.000 0.00 0.00 0.00 3.51
1229 1275 0.546598 CTTAAACCCCGGCTGATCCT 59.453 55.000 0.00 0.00 0.00 3.24
1484 1533 0.803768 CGCCAGAGACTCATTGACGG 60.804 60.000 5.02 0.00 0.00 4.79
1488 1537 1.081892 CCAACGCCAGAGACTCATTG 58.918 55.000 5.02 0.00 0.00 2.82
1489 1538 0.674895 GCCAACGCCAGAGACTCATT 60.675 55.000 5.02 0.00 0.00 2.57
2123 2593 2.046217 GGAGGAGGGTTTGGTCGC 60.046 66.667 0.00 0.00 0.00 5.19
2256 2726 2.279851 TGCGTCCACGTCAGGTTG 60.280 61.111 0.36 0.00 42.22 3.77
2454 2925 3.972971 CTGCAGCAGCTGGAGGTCC 62.973 68.421 31.18 11.70 44.36 4.46
2544 3016 1.291184 TGGTGTCTCGCATTTGCTCG 61.291 55.000 0.51 0.00 39.32 5.03
2546 3018 1.089920 GATGGTGTCTCGCATTTGCT 58.910 50.000 0.51 0.00 39.32 3.91
2611 3083 3.065648 GCTGCTAGCTAGTAGAAAGACGT 59.934 47.826 34.71 0.00 38.14 4.34
2613 3085 3.381908 TGGCTGCTAGCTAGTAGAAAGAC 59.618 47.826 34.71 19.80 41.99 3.01
2615 3087 3.976169 CTGGCTGCTAGCTAGTAGAAAG 58.024 50.000 34.71 26.33 43.76 2.62
2623 3095 3.926729 AGGTACTGGCTGCTAGCTA 57.073 52.632 17.23 1.31 41.99 3.32
2635 3113 5.238650 CGGTCAAGAAATGAAAACAGGTACT 59.761 40.000 0.00 0.00 40.50 2.73
2636 3114 5.449304 CGGTCAAGAAATGAAAACAGGTAC 58.551 41.667 0.00 0.00 40.50 3.34
2637 3115 4.517453 CCGGTCAAGAAATGAAAACAGGTA 59.483 41.667 0.00 0.00 40.50 3.08
2638 3116 3.317993 CCGGTCAAGAAATGAAAACAGGT 59.682 43.478 0.00 0.00 40.50 4.00
2639 3117 3.568007 TCCGGTCAAGAAATGAAAACAGG 59.432 43.478 0.00 0.00 40.50 4.00
2640 3118 4.829064 TCCGGTCAAGAAATGAAAACAG 57.171 40.909 0.00 0.00 40.50 3.16
2641 3119 4.083537 CGATCCGGTCAAGAAATGAAAACA 60.084 41.667 0.00 0.00 40.50 2.83
2642 3120 4.153475 TCGATCCGGTCAAGAAATGAAAAC 59.847 41.667 0.00 0.00 40.50 2.43
2643 3121 4.320023 TCGATCCGGTCAAGAAATGAAAA 58.680 39.130 0.00 0.00 40.50 2.29
2682 3163 9.220906 TGCTCTACTCCCTTAATTATTCCTTTA 57.779 33.333 0.00 0.00 0.00 1.85
2786 3283 1.077858 GACGGACGGAGGGAGTACT 60.078 63.158 0.00 0.00 0.00 2.73
2787 3284 2.117779 GGACGGACGGAGGGAGTAC 61.118 68.421 0.00 0.00 0.00 2.73
2788 3285 2.273449 GGACGGACGGAGGGAGTA 59.727 66.667 0.00 0.00 0.00 2.59
2789 3286 3.975591 TGGACGGACGGAGGGAGT 61.976 66.667 0.00 0.00 0.00 3.85
2790 3287 3.450115 GTGGACGGACGGAGGGAG 61.450 72.222 0.00 0.00 0.00 4.30
2793 3290 2.424705 TTTTCGTGGACGGACGGAGG 62.425 60.000 0.00 0.00 39.88 4.30
2794 3291 1.007038 TTTTCGTGGACGGACGGAG 60.007 57.895 0.00 0.00 39.88 4.63
2795 3292 1.300080 GTTTTCGTGGACGGACGGA 60.300 57.895 0.00 0.00 39.88 4.69
2796 3293 0.877213 AAGTTTTCGTGGACGGACGG 60.877 55.000 0.00 0.00 39.88 4.79
2797 3294 0.231279 CAAGTTTTCGTGGACGGACG 59.769 55.000 0.00 0.00 40.83 4.79
2798 3295 1.259770 GACAAGTTTTCGTGGACGGAC 59.740 52.381 0.00 0.00 40.29 4.79
2799 3296 1.574134 GACAAGTTTTCGTGGACGGA 58.426 50.000 0.00 0.00 40.29 4.69
2800 3297 0.584876 GGACAAGTTTTCGTGGACGG 59.415 55.000 0.00 0.00 40.29 4.79
2801 3298 0.584876 GGGACAAGTTTTCGTGGACG 59.415 55.000 0.00 0.00 41.45 4.79
2802 3299 1.670791 TGGGACAAGTTTTCGTGGAC 58.329 50.000 0.00 0.00 31.92 4.02
2815 3312 7.181361 TCCATTTGAGAGATAAATTTGGGACA 58.819 34.615 0.00 0.00 0.00 4.02
2816 3313 7.645058 TCCATTTGAGAGATAAATTTGGGAC 57.355 36.000 0.00 0.00 0.00 4.46
2827 3324 9.044646 AGTGCTACATATATCCATTTGAGAGAT 57.955 33.333 0.00 0.00 0.00 2.75
2828 3325 8.427902 AGTGCTACATATATCCATTTGAGAGA 57.572 34.615 0.00 0.00 0.00 3.10
2830 3327 9.929180 GTTAGTGCTACATATATCCATTTGAGA 57.071 33.333 0.00 0.00 0.00 3.27
2831 3328 9.935241 AGTTAGTGCTACATATATCCATTTGAG 57.065 33.333 0.00 0.00 0.00 3.02
2836 3333 9.881649 CATCAAGTTAGTGCTACATATATCCAT 57.118 33.333 0.00 0.00 0.00 3.41
2837 3334 8.314021 CCATCAAGTTAGTGCTACATATATCCA 58.686 37.037 0.00 0.00 0.00 3.41
2838 3335 8.314751 ACCATCAAGTTAGTGCTACATATATCC 58.685 37.037 0.00 0.00 0.00 2.59
2841 3338 9.582648 TCTACCATCAAGTTAGTGCTACATATA 57.417 33.333 0.00 0.00 0.00 0.86
2842 3339 8.478775 TCTACCATCAAGTTAGTGCTACATAT 57.521 34.615 0.00 0.00 0.00 1.78
2843 3340 7.891498 TCTACCATCAAGTTAGTGCTACATA 57.109 36.000 0.00 0.00 0.00 2.29
2844 3341 6.791867 TCTACCATCAAGTTAGTGCTACAT 57.208 37.500 0.00 0.00 0.00 2.29
2845 3342 6.791867 ATCTACCATCAAGTTAGTGCTACA 57.208 37.500 0.00 0.00 0.00 2.74
2846 3343 7.713750 TGTATCTACCATCAAGTTAGTGCTAC 58.286 38.462 0.00 0.00 0.00 3.58
2847 3344 7.891498 TGTATCTACCATCAAGTTAGTGCTA 57.109 36.000 0.00 0.00 0.00 3.49
2848 3345 6.791867 TGTATCTACCATCAAGTTAGTGCT 57.208 37.500 0.00 0.00 0.00 4.40
2849 3346 7.210174 TGATGTATCTACCATCAAGTTAGTGC 58.790 38.462 0.84 0.00 33.05 4.40
2850 3347 9.770097 ATTGATGTATCTACCATCAAGTTAGTG 57.230 33.333 17.59 0.00 44.98 2.74
2855 3352 9.334947 CTCAAATTGATGTATCTACCATCAAGT 57.665 33.333 17.59 13.74 44.98 3.16
2856 3353 9.551734 TCTCAAATTGATGTATCTACCATCAAG 57.448 33.333 17.59 7.13 44.98 3.02
2857 3354 9.551734 CTCTCAAATTGATGTATCTACCATCAA 57.448 33.333 15.67 15.67 45.57 2.57
2858 3355 8.927411 TCTCTCAAATTGATGTATCTACCATCA 58.073 33.333 0.00 0.00 34.01 3.07
2859 3356 9.202273 GTCTCTCAAATTGATGTATCTACCATC 57.798 37.037 0.00 0.00 0.00 3.51
2860 3357 8.708378 TGTCTCTCAAATTGATGTATCTACCAT 58.292 33.333 0.00 0.00 0.00 3.55
2861 3358 8.078060 TGTCTCTCAAATTGATGTATCTACCA 57.922 34.615 0.00 0.00 0.00 3.25
2862 3359 8.821894 GTTGTCTCTCAAATTGATGTATCTACC 58.178 37.037 0.00 0.00 37.81 3.18
2863 3360 8.821894 GGTTGTCTCTCAAATTGATGTATCTAC 58.178 37.037 0.00 0.00 37.81 2.59
2864 3361 8.762645 AGGTTGTCTCTCAAATTGATGTATCTA 58.237 33.333 0.00 0.00 37.81 1.98
2865 3362 7.628234 AGGTTGTCTCTCAAATTGATGTATCT 58.372 34.615 0.00 0.00 37.81 1.98
2866 3363 7.856145 AGGTTGTCTCTCAAATTGATGTATC 57.144 36.000 0.00 0.00 37.81 2.24
2867 3364 8.641498 AAAGGTTGTCTCTCAAATTGATGTAT 57.359 30.769 0.00 0.00 37.81 2.29
2868 3365 8.463930 AAAAGGTTGTCTCTCAAATTGATGTA 57.536 30.769 0.00 0.00 37.81 2.29
2869 3366 6.966534 AAAGGTTGTCTCTCAAATTGATGT 57.033 33.333 0.00 0.00 37.81 3.06
2870 3367 7.113965 CGAAAAAGGTTGTCTCTCAAATTGATG 59.886 37.037 0.00 0.00 37.81 3.07
2871 3368 7.013274 TCGAAAAAGGTTGTCTCTCAAATTGAT 59.987 33.333 0.00 0.00 37.81 2.57
2872 3369 6.317642 TCGAAAAAGGTTGTCTCTCAAATTGA 59.682 34.615 0.00 0.00 37.81 2.57
2873 3370 6.494842 TCGAAAAAGGTTGTCTCTCAAATTG 58.505 36.000 0.00 0.00 37.81 2.32
2874 3371 6.693315 TCGAAAAAGGTTGTCTCTCAAATT 57.307 33.333 0.00 0.00 37.81 1.82
2875 3372 6.495706 GTTCGAAAAAGGTTGTCTCTCAAAT 58.504 36.000 0.00 0.00 37.81 2.32
2876 3373 5.446741 CGTTCGAAAAAGGTTGTCTCTCAAA 60.447 40.000 0.00 0.00 37.81 2.69
2877 3374 4.033587 CGTTCGAAAAAGGTTGTCTCTCAA 59.966 41.667 0.00 0.00 0.00 3.02
2878 3375 3.554324 CGTTCGAAAAAGGTTGTCTCTCA 59.446 43.478 0.00 0.00 0.00 3.27
2879 3376 3.059800 CCGTTCGAAAAAGGTTGTCTCTC 60.060 47.826 0.00 0.00 30.22 3.20
2880 3377 2.870411 CCGTTCGAAAAAGGTTGTCTCT 59.130 45.455 0.00 0.00 30.22 3.10
2881 3378 2.867975 TCCGTTCGAAAAAGGTTGTCTC 59.132 45.455 0.00 0.00 35.70 3.36
2882 3379 2.870411 CTCCGTTCGAAAAAGGTTGTCT 59.130 45.455 0.00 0.00 35.70 3.41
2883 3380 2.032290 CCTCCGTTCGAAAAAGGTTGTC 60.032 50.000 0.00 0.00 35.70 3.18
2884 3381 1.944709 CCTCCGTTCGAAAAAGGTTGT 59.055 47.619 0.00 0.00 35.70 3.32
2885 3382 1.265905 CCCTCCGTTCGAAAAAGGTTG 59.734 52.381 16.33 10.45 35.70 3.77
2886 3383 1.141455 TCCCTCCGTTCGAAAAAGGTT 59.859 47.619 16.33 0.00 35.70 3.50
2887 3384 0.760572 TCCCTCCGTTCGAAAAAGGT 59.239 50.000 16.33 0.00 35.70 3.50
2888 3385 1.270678 ACTCCCTCCGTTCGAAAAAGG 60.271 52.381 0.00 7.08 35.55 3.11
2889 3386 2.165319 ACTCCCTCCGTTCGAAAAAG 57.835 50.000 0.00 0.00 0.00 2.27
2890 3387 3.258872 TCATACTCCCTCCGTTCGAAAAA 59.741 43.478 0.00 0.00 0.00 1.94
2891 3388 2.827322 TCATACTCCCTCCGTTCGAAAA 59.173 45.455 0.00 0.00 0.00 2.29
2892 3389 2.449464 TCATACTCCCTCCGTTCGAAA 58.551 47.619 0.00 0.00 0.00 3.46
2893 3390 2.133281 TCATACTCCCTCCGTTCGAA 57.867 50.000 0.00 0.00 0.00 3.71
2894 3391 2.359981 ATCATACTCCCTCCGTTCGA 57.640 50.000 0.00 0.00 0.00 3.71
2895 3392 3.381949 GAAATCATACTCCCTCCGTTCG 58.618 50.000 0.00 0.00 0.00 3.95
2896 3393 3.381949 CGAAATCATACTCCCTCCGTTC 58.618 50.000 0.00 0.00 0.00 3.95
2897 3394 2.102588 CCGAAATCATACTCCCTCCGTT 59.897 50.000 0.00 0.00 0.00 4.44
2898 3395 1.687123 CCGAAATCATACTCCCTCCGT 59.313 52.381 0.00 0.00 0.00 4.69
2899 3396 1.000955 CCCGAAATCATACTCCCTCCG 59.999 57.143 0.00 0.00 0.00 4.63
2900 3397 1.270893 GCCCGAAATCATACTCCCTCC 60.271 57.143 0.00 0.00 0.00 4.30
2901 3398 1.416401 TGCCCGAAATCATACTCCCTC 59.584 52.381 0.00 0.00 0.00 4.30
2902 3399 1.507140 TGCCCGAAATCATACTCCCT 58.493 50.000 0.00 0.00 0.00 4.20
2903 3400 1.947456 GTTGCCCGAAATCATACTCCC 59.053 52.381 0.00 0.00 0.00 4.30
2904 3401 1.597663 CGTTGCCCGAAATCATACTCC 59.402 52.381 0.00 0.00 39.56 3.85
2905 3402 2.277084 ACGTTGCCCGAAATCATACTC 58.723 47.619 0.00 0.00 40.70 2.59
2981 3491 9.762933 TCCTAAAACATGAAGAAAAAGGAAATG 57.237 29.630 0.00 0.00 0.00 2.32
3068 3603 7.456725 AGATCAATCTAGTGTATTTGATGGGG 58.543 38.462 0.00 0.00 38.55 4.96
3069 3604 8.373981 AGAGATCAATCTAGTGTATTTGATGGG 58.626 37.037 0.00 0.00 38.55 4.00
3130 5209 4.579454 TCCGGATTTCATACTAACCGAG 57.421 45.455 0.00 0.00 42.40 4.63
3192 5368 9.772973 TCTCTTGAAGTTAGTTTAGCATACAAA 57.227 29.630 0.00 0.00 0.00 2.83
3193 5369 9.204570 GTCTCTTGAAGTTAGTTTAGCATACAA 57.795 33.333 0.00 0.00 0.00 2.41
3194 5370 7.541091 CGTCTCTTGAAGTTAGTTTAGCATACA 59.459 37.037 0.00 0.00 0.00 2.29
3195 5371 7.541437 ACGTCTCTTGAAGTTAGTTTAGCATAC 59.459 37.037 0.00 0.00 31.06 2.39
3196 5372 7.600065 ACGTCTCTTGAAGTTAGTTTAGCATA 58.400 34.615 0.00 0.00 31.06 3.14
3197 5373 6.456501 ACGTCTCTTGAAGTTAGTTTAGCAT 58.543 36.000 0.00 0.00 31.06 3.79
3198 5374 5.839621 ACGTCTCTTGAAGTTAGTTTAGCA 58.160 37.500 0.00 0.00 31.06 3.49
3199 5375 6.151004 AGACGTCTCTTGAAGTTAGTTTAGC 58.849 40.000 13.58 0.00 35.17 3.09
3200 5376 9.116054 GTAAGACGTCTCTTGAAGTTAGTTTAG 57.884 37.037 20.33 0.00 37.32 1.85
3201 5377 8.623903 TGTAAGACGTCTCTTGAAGTTAGTTTA 58.376 33.333 20.33 0.00 37.32 2.01
3202 5378 7.486647 TGTAAGACGTCTCTTGAAGTTAGTTT 58.513 34.615 20.33 0.00 37.32 2.66
3203 5379 7.035840 TGTAAGACGTCTCTTGAAGTTAGTT 57.964 36.000 20.33 0.21 37.32 2.24
3204 5380 6.630444 TGTAAGACGTCTCTTGAAGTTAGT 57.370 37.500 20.33 0.44 37.32 2.24
3205 5381 8.522178 AAATGTAAGACGTCTCTTGAAGTTAG 57.478 34.615 20.33 0.00 37.32 2.34
3206 5382 8.761497 CAAAATGTAAGACGTCTCTTGAAGTTA 58.239 33.333 20.33 1.54 37.32 2.24
3207 5383 7.494625 TCAAAATGTAAGACGTCTCTTGAAGTT 59.505 33.333 20.33 2.64 37.32 2.66
3208 5384 6.984474 TCAAAATGTAAGACGTCTCTTGAAGT 59.016 34.615 20.33 3.47 37.32 3.01
3209 5385 7.408132 TCAAAATGTAAGACGTCTCTTGAAG 57.592 36.000 20.33 5.60 37.32 3.02
3210 5386 7.962964 ATCAAAATGTAAGACGTCTCTTGAA 57.037 32.000 20.33 3.70 37.32 2.69
3211 5387 9.087424 CATATCAAAATGTAAGACGTCTCTTGA 57.913 33.333 20.33 18.54 37.32 3.02
3212 5388 8.331022 CCATATCAAAATGTAAGACGTCTCTTG 58.669 37.037 20.33 14.43 37.32 3.02
3213 5389 8.258007 TCCATATCAAAATGTAAGACGTCTCTT 58.742 33.333 20.33 6.78 40.13 2.85
3214 5390 7.782049 TCCATATCAAAATGTAAGACGTCTCT 58.218 34.615 20.33 11.63 0.00 3.10
3215 5391 7.169982 CCTCCATATCAAAATGTAAGACGTCTC 59.830 40.741 20.33 8.01 0.00 3.36
3216 5392 6.986817 CCTCCATATCAAAATGTAAGACGTCT 59.013 38.462 13.58 13.58 0.00 4.18
3217 5393 6.761714 ACCTCCATATCAAAATGTAAGACGTC 59.238 38.462 7.70 7.70 0.00 4.34
3218 5394 6.650120 ACCTCCATATCAAAATGTAAGACGT 58.350 36.000 0.00 0.00 0.00 4.34
3219 5395 8.657074 TTACCTCCATATCAAAATGTAAGACG 57.343 34.615 0.00 0.00 0.00 4.18
3340 5548 5.055642 TCAAAGTCTACATACAGTCGGTG 57.944 43.478 0.00 0.00 0.00 4.94
3360 5568 0.040058 ATGGATGGTGGCAAGCTTCA 59.960 50.000 8.30 0.00 31.39 3.02
3373 5581 6.487668 TGGTACAAATAGCAGATTCATGGATG 59.512 38.462 0.00 0.00 33.86 3.51
3436 5646 1.237533 TCAATTCACGCACATGCTGT 58.762 45.000 1.82 0.00 39.32 4.40
3441 5651 5.005586 CACAAAAAGTTCAATTCACGCACAT 59.994 36.000 0.00 0.00 0.00 3.21
3511 5723 6.514947 TGAAAAATGTTCCAACCAGATTCAG 58.485 36.000 0.00 0.00 0.00 3.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.