Multiple sequence alignment - TraesCS3A01G108900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G108900 chr3A 100.000 6906 0 0 1 6906 74780616 74787521 0.000000e+00 12754.0
1 TraesCS3A01G108900 chr3A 89.356 404 36 7 6503 6904 573107653 573107255 1.030000e-137 501.0
2 TraesCS3A01G108900 chr3D 97.445 4305 94 12 2181 6473 64371384 64375684 0.000000e+00 7326.0
3 TraesCS3A01G108900 chr3D 91.108 2148 86 41 87 2176 64369241 64371341 0.000000e+00 2811.0
4 TraesCS3A01G108900 chr3B 94.554 4113 128 27 2151 6218 106963976 106968037 0.000000e+00 6266.0
5 TraesCS3A01G108900 chr3B 89.207 1816 85 41 450 2207 106962214 106963976 0.000000e+00 2165.0
6 TraesCS3A01G108900 chr3B 94.737 38 2 0 6464 6501 787903322 787903285 7.480000e-05 60.2
7 TraesCS3A01G108900 chr6B 89.851 404 35 6 6503 6904 434182139 434182538 1.330000e-141 514.0
8 TraesCS3A01G108900 chr6D 89.526 401 40 2 6503 6902 456100937 456100538 2.220000e-139 507.0
9 TraesCS3A01G108900 chr5A 89.698 398 37 4 6507 6904 53331802 53332195 7.990000e-139 505.0
10 TraesCS3A01G108900 chr5A 100.000 30 0 0 6471 6500 283466211 283466182 1.000000e-03 56.5
11 TraesCS3A01G108900 chr5B 89.356 404 37 6 6503 6904 530781310 530781709 2.880000e-138 503.0
12 TraesCS3A01G108900 chr7D 89.109 404 38 6 6503 6904 553064729 553065128 1.340000e-136 497.0
13 TraesCS3A01G108900 chr7D 97.368 38 1 0 6464 6501 93090938 93090975 1.610000e-06 65.8
14 TraesCS3A01G108900 chr7B 89.109 404 39 5 6503 6904 684597280 684597680 1.340000e-136 497.0
15 TraesCS3A01G108900 chr4A 89.163 406 35 8 6503 6904 470138872 470139272 1.340000e-136 497.0
16 TraesCS3A01G108900 chr4A 97.436 39 0 1 6464 6501 637534178 637534140 1.610000e-06 65.8
17 TraesCS3A01G108900 chr5D 89.082 403 39 5 6504 6904 500152350 500151951 4.810000e-136 496.0
18 TraesCS3A01G108900 chr4B 91.026 78 7 0 5430 5507 653741829 653741752 9.470000e-19 106.0
19 TraesCS3A01G108900 chr4D 100.000 41 0 0 6431 6471 455430132 455430092 7.430000e-10 76.8
20 TraesCS3A01G108900 chr2A 93.182 44 2 1 6458 6501 4657532 4657574 5.780000e-06 63.9
21 TraesCS3A01G108900 chr7A 93.182 44 0 2 6458 6501 61889789 61889829 2.080000e-05 62.1
22 TraesCS3A01G108900 chr2B 94.737 38 2 0 6463 6500 728227089 728227052 7.480000e-05 60.2
23 TraesCS3A01G108900 chr1B 94.737 38 2 0 6464 6501 310100651 310100688 7.480000e-05 60.2
24 TraesCS3A01G108900 chr1B 92.683 41 1 2 6465 6503 158519700 158519740 2.690000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G108900 chr3A 74780616 74787521 6905 False 12754.0 12754 100.0000 1 6906 1 chr3A.!!$F1 6905
1 TraesCS3A01G108900 chr3D 64369241 64375684 6443 False 5068.5 7326 94.2765 87 6473 2 chr3D.!!$F1 6386
2 TraesCS3A01G108900 chr3B 106962214 106968037 5823 False 4215.5 6266 91.8805 450 6218 2 chr3B.!!$F1 5768

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
756 802 0.956902 AAAGTATTTTCCGCCGCCGT 60.957 50.000 0.00 0.00 31.62 5.68 F
1171 1239 0.319211 CGGTGCTCCTGACGTTTGTA 60.319 55.000 2.85 0.00 0.00 2.41 F
2176 2282 0.918619 CGACAGCCGTATGGTAAACG 59.081 55.000 2.17 1.08 40.01 3.60 F
3122 3305 0.616679 TGGAGGTGTACTGTAGGGGC 60.617 60.000 0.00 0.00 0.00 5.80 F
4120 4327 2.086610 ATTTGTTCCTTGGTGCTGGT 57.913 45.000 0.00 0.00 0.00 4.00 F
5194 5408 4.261614 GGCACAAGAAGGGTTCACTAAAAG 60.262 45.833 0.00 0.00 0.00 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 1804 0.108329 ACACGGAAATCTACTGCCCG 60.108 55.000 0.00 0.00 45.09 6.13 R
2648 2826 0.250166 GCAACGGGACCTTGTACTGT 60.250 55.000 0.00 0.00 37.63 3.55 R
3523 3728 1.134367 CGAAGCCCGATGTAGAACTCA 59.866 52.381 0.00 0.00 41.76 3.41 R
4859 5072 1.546029 TCAACTGTCTCACTGATCCCG 59.454 52.381 0.00 0.00 0.00 5.14 R
5241 5455 0.107831 CAGGGTCAAACGGACTTCCA 59.892 55.000 0.00 0.00 46.16 3.53 R
6863 7082 0.105039 CTAGGCCAGCCGGAAACTAG 59.895 60.000 5.05 5.16 41.95 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 9.123902 AGTATTGTTGCATATGCTCAATTTAGA 57.876 29.630 33.46 22.80 41.80 2.10
72 73 9.903682 GTATTGTTGCATATGCTCAATTTAGAT 57.096 29.630 33.46 22.17 41.80 1.98
74 75 9.903682 ATTGTTGCATATGCTCAATTTAGATAC 57.096 29.630 28.48 13.43 40.32 2.24
75 76 8.681486 TGTTGCATATGCTCAATTTAGATACT 57.319 30.769 27.13 0.00 42.66 2.12
76 77 9.123902 TGTTGCATATGCTCAATTTAGATACTT 57.876 29.630 27.13 0.00 42.66 2.24
77 78 9.956720 GTTGCATATGCTCAATTTAGATACTTT 57.043 29.630 27.13 0.00 42.66 2.66
84 85 8.542497 TGCTCAATTTAGATACTTTTACGTGT 57.458 30.769 0.00 0.00 0.00 4.49
85 86 9.642327 TGCTCAATTTAGATACTTTTACGTGTA 57.358 29.630 0.00 0.00 0.00 2.90
99 100 8.887717 ACTTTTACGTGTACTAGTGAGGTATAG 58.112 37.037 5.39 10.21 0.00 1.31
124 125 8.842280 AGTCAAGTAAAATATTGGACAAAACGA 58.158 29.630 0.00 0.00 0.00 3.85
217 218 4.582701 ATCGTTTTCATGAAGCCAAACA 57.417 36.364 16.85 7.83 0.00 2.83
340 341 8.774890 AAAATAATACATTTGTTGCATGCTCA 57.225 26.923 20.33 14.97 0.00 4.26
341 342 7.997107 AATAATACATTTGTTGCATGCTCAG 57.003 32.000 20.33 8.97 0.00 3.35
342 343 5.395682 AATACATTTGTTGCATGCTCAGT 57.604 34.783 20.33 13.68 0.00 3.41
343 344 3.738830 ACATTTGTTGCATGCTCAGTT 57.261 38.095 20.33 6.79 0.00 3.16
374 394 2.190398 ACATGTACTAGCCCCCATCA 57.810 50.000 0.00 0.00 0.00 3.07
431 451 5.789643 AACAAACTGTTTATGCAGGTCAT 57.210 34.783 5.31 0.00 37.26 3.06
560 580 1.070786 GACAGTTTCCGCCACTGGA 59.929 57.895 0.00 0.00 45.20 3.86
568 591 2.048597 CGCCACTGGAACGTAGCA 60.049 61.111 0.00 0.00 0.00 3.49
569 592 2.380410 CGCCACTGGAACGTAGCAC 61.380 63.158 0.00 0.00 0.00 4.40
577 600 3.684788 ACTGGAACGTAGCACATCATTTC 59.315 43.478 0.00 0.00 0.00 2.17
593 616 1.710816 TTTCCGGAAAGCCAACCAAT 58.289 45.000 25.67 0.00 0.00 3.16
683 722 1.904771 GGTCACCATCCATCGACCA 59.095 57.895 0.00 0.00 45.96 4.02
690 733 2.168521 ACCATCCATCGACCACTGTAAG 59.831 50.000 0.00 0.00 42.29 2.34
746 792 3.127376 ACCGCGGCGAATTAAAGTATTTT 59.873 39.130 28.58 0.00 40.09 1.82
747 793 3.722289 CCGCGGCGAATTAAAGTATTTTC 59.278 43.478 25.92 0.00 40.09 2.29
749 795 3.722289 GCGGCGAATTAAAGTATTTTCCG 59.278 43.478 12.98 0.00 40.09 4.30
753 799 3.722289 CGAATTAAAGTATTTTCCGCCGC 59.278 43.478 0.00 0.00 40.09 6.53
756 802 0.956902 AAAGTATTTTCCGCCGCCGT 60.957 50.000 0.00 0.00 31.62 5.68
867 913 2.038329 TCTCGTCCCCGTCCCATT 59.962 61.111 0.00 0.00 35.01 3.16
870 916 4.171103 CGTCCCCGTCCCATTCCC 62.171 72.222 0.00 0.00 0.00 3.97
871 917 3.012722 GTCCCCGTCCCATTCCCA 61.013 66.667 0.00 0.00 0.00 4.37
874 920 3.015145 CCCGTCCCATTCCCACCT 61.015 66.667 0.00 0.00 0.00 4.00
875 921 2.590092 CCGTCCCATTCCCACCTC 59.410 66.667 0.00 0.00 0.00 3.85
897 944 3.385384 CAGCCTCCTCCACGCTCA 61.385 66.667 0.00 0.00 0.00 4.26
1160 1228 1.866925 GCTGTGTTTACGGTGCTCC 59.133 57.895 0.00 0.00 35.54 4.70
1161 1229 0.602905 GCTGTGTTTACGGTGCTCCT 60.603 55.000 2.85 0.00 35.54 3.69
1164 1232 1.145803 GTGTTTACGGTGCTCCTGAC 58.854 55.000 2.85 0.00 0.00 3.51
1171 1239 0.319211 CGGTGCTCCTGACGTTTGTA 60.319 55.000 2.85 0.00 0.00 2.41
1402 1479 4.475135 GCCGAGAAGGAGGTGGCC 62.475 72.222 0.00 0.00 45.00 5.36
1723 1804 4.561735 TCACCCGAAACAAATCTGAAAC 57.438 40.909 0.00 0.00 0.00 2.78
1725 1806 2.292292 ACCCGAAACAAATCTGAAACGG 59.708 45.455 0.00 0.00 35.93 4.44
1727 1808 2.315901 CGAAACAAATCTGAAACGGGC 58.684 47.619 0.00 0.00 0.00 6.13
1871 1952 2.869636 GGAGTCGTCCAGCTAGTCA 58.130 57.895 0.00 0.00 43.31 3.41
2005 2093 6.038271 AGGTTGTTAGTAGTTGAGCAAAACAG 59.962 38.462 4.58 0.00 32.21 3.16
2006 2094 6.037830 GGTTGTTAGTAGTTGAGCAAAACAGA 59.962 38.462 4.58 0.00 32.21 3.41
2007 2095 7.414762 GGTTGTTAGTAGTTGAGCAAAACAGAA 60.415 37.037 4.58 0.00 32.21 3.02
2008 2096 7.801716 TGTTAGTAGTTGAGCAAAACAGAAT 57.198 32.000 4.58 0.00 32.21 2.40
2009 2097 8.220755 TGTTAGTAGTTGAGCAAAACAGAATT 57.779 30.769 4.58 0.00 32.21 2.17
2010 2098 8.128582 TGTTAGTAGTTGAGCAAAACAGAATTG 58.871 33.333 4.58 0.00 32.21 2.32
2011 2099 6.076981 AGTAGTTGAGCAAAACAGAATTGG 57.923 37.500 4.58 0.00 32.21 3.16
2012 2100 5.594317 AGTAGTTGAGCAAAACAGAATTGGT 59.406 36.000 4.58 0.00 40.88 3.67
2013 2101 5.343307 AGTTGAGCAAAACAGAATTGGTT 57.657 34.783 4.58 0.00 38.51 3.67
2014 2102 5.111293 AGTTGAGCAAAACAGAATTGGTTG 58.889 37.500 4.58 0.00 38.51 3.77
2068 2174 7.445402 GCTGGAGTATATTCTAATCTGGCAAAA 59.555 37.037 0.00 0.00 0.00 2.44
2176 2282 0.918619 CGACAGCCGTATGGTAAACG 59.081 55.000 2.17 1.08 40.01 3.60
2247 2425 2.620585 ACTTCAGCAAGGAAAGTCAAGC 59.379 45.455 0.00 0.00 33.37 4.01
2261 2439 1.895131 GTCAAGCACCCAATTGACCAT 59.105 47.619 7.12 0.00 46.15 3.55
2329 2507 8.331742 GTTGTAACTTCTAAGATAGCTTCATGC 58.668 37.037 0.00 0.00 43.29 4.06
2411 2589 7.865706 ATCGAATGCTAATAGACCTTTTGTT 57.134 32.000 0.00 0.00 0.00 2.83
2424 2602 4.542697 ACCTTTTGTTCCACAGTGGTTAT 58.457 39.130 19.65 0.00 39.03 1.89
2427 2605 5.533154 CCTTTTGTTCCACAGTGGTTATACA 59.467 40.000 19.65 15.31 39.03 2.29
2546 2724 2.486191 CCCAGGATCTCCAAGTATGTGC 60.486 54.545 0.00 0.00 38.89 4.57
2639 2817 2.950309 GCAGGTGAAGAAGATCATGCAT 59.050 45.455 0.00 0.00 36.06 3.96
2648 2826 5.282055 AGAAGATCATGCATAACCTTCGA 57.718 39.130 19.50 5.98 36.20 3.71
2805 2985 5.875224 TGAAGATCTGATAAAACCCACACA 58.125 37.500 0.00 0.00 0.00 3.72
2811 2991 2.158534 TGATAAAACCCACACAGCACCT 60.159 45.455 0.00 0.00 0.00 4.00
2906 3086 6.386635 AGGAGAGAAATGAGAGGCTTTTCTAT 59.613 38.462 10.94 8.63 45.58 1.98
3087 3270 8.970691 ACTTGCAAGAATTATGTATTGTGTTC 57.029 30.769 32.50 0.00 0.00 3.18
3113 3296 1.906574 TGGGACTGATTGGAGGTGTAC 59.093 52.381 0.00 0.00 0.00 2.90
3122 3305 0.616679 TGGAGGTGTACTGTAGGGGC 60.617 60.000 0.00 0.00 0.00 5.80
3170 3353 2.746362 GCCTGAGAGGAACATTCAAGTG 59.254 50.000 0.00 0.00 37.67 3.16
3353 3536 2.592993 CCTTGGAGGAGTTCGCCCA 61.593 63.158 0.00 0.00 37.67 5.36
3510 3715 4.629634 TGATGTTGGTACTAACAATGAGCG 59.370 41.667 25.88 0.00 43.13 5.03
3763 3970 7.333423 TCAGACACCTAGTAAATTGCATGTTAC 59.667 37.037 10.59 10.59 0.00 2.50
3941 4148 3.592059 TCAGTTTTATCACGTGCTACCC 58.408 45.455 11.67 0.00 0.00 3.69
4075 4282 4.385825 TGTTATCTTCGCTGAAGGTTGTT 58.614 39.130 15.15 3.03 39.82 2.83
4120 4327 2.086610 ATTTGTTCCTTGGTGCTGGT 57.913 45.000 0.00 0.00 0.00 4.00
4859 5072 6.864165 TGTTGTTGTTCAAGTTGTAACTTTCC 59.136 34.615 7.25 0.42 46.52 3.13
5194 5408 4.261614 GGCACAAGAAGGGTTCACTAAAAG 60.262 45.833 0.00 0.00 0.00 2.27
5283 5497 4.212214 GTGGAGTATGATGGAAAGATTCGC 59.788 45.833 0.00 0.00 0.00 4.70
5310 5524 5.720202 CCTGGCCAGGTATTTTTCTTTTAC 58.280 41.667 39.52 0.00 43.61 2.01
5704 5920 5.901413 TCAGAAAGATATCTGCCCTCATT 57.099 39.130 5.86 0.00 45.21 2.57
5988 6206 0.880278 TGTCTGTCGCTGTTCTTGCC 60.880 55.000 0.00 0.00 0.00 4.52
5996 6214 3.606065 CTGTTCTTGCCGCTGCTGC 62.606 63.158 9.23 9.23 38.71 5.25
6029 6247 6.852664 TCTGTCTATACATATATGCCGTGTG 58.147 40.000 12.79 0.00 34.37 3.82
6103 6321 3.991773 TGTTATTCGTGTAGGTTGAGTGC 59.008 43.478 0.00 0.00 0.00 4.40
6251 6469 7.402071 AGTGAAGGAGTTAACTAATGGATGGTA 59.598 37.037 8.42 0.00 0.00 3.25
6253 6471 8.429641 TGAAGGAGTTAACTAATGGATGGTATC 58.570 37.037 8.42 0.00 0.00 2.24
6259 6477 9.975218 AGTTAACTAATGGATGGTATCAAAAGT 57.025 29.630 6.26 0.00 0.00 2.66
6343 6561 7.475840 GGTTTTGCATCAAAAACATTTTACCA 58.524 30.769 13.36 0.00 46.49 3.25
6413 6631 9.713740 GAGCACTAAATGACTAAATCAAATCAG 57.286 33.333 0.00 0.00 41.93 2.90
6433 6651 6.692849 TCAGTGGCTTGGATCTATTATCAT 57.307 37.500 0.00 0.00 0.00 2.45
6451 6669 4.733077 TCATGTGAAAAGGGGAGGTAAA 57.267 40.909 0.00 0.00 0.00 2.01
6473 6692 6.857437 AAAGGGAGCATGCTAAAATTTACT 57.143 33.333 22.74 7.11 0.00 2.24
6474 6693 6.456795 AAGGGAGCATGCTAAAATTTACTC 57.543 37.500 22.74 5.24 0.00 2.59
6475 6694 4.889995 AGGGAGCATGCTAAAATTTACTCC 59.110 41.667 22.74 13.32 41.40 3.85
6476 6695 5.188327 GGAGCATGCTAAAATTTACTCCC 57.812 43.478 22.74 9.11 37.15 4.30
6477 6696 4.889995 GGAGCATGCTAAAATTTACTCCCT 59.110 41.667 22.74 0.00 37.15 4.20
6478 6697 5.009110 GGAGCATGCTAAAATTTACTCCCTC 59.991 44.000 22.74 1.76 37.15 4.30
6479 6698 4.889995 AGCATGCTAAAATTTACTCCCTCC 59.110 41.667 21.21 0.00 0.00 4.30
6480 6699 4.261197 GCATGCTAAAATTTACTCCCTCCG 60.261 45.833 11.37 0.00 0.00 4.63
6481 6700 4.563140 TGCTAAAATTTACTCCCTCCGT 57.437 40.909 0.00 0.00 0.00 4.69
6482 6701 4.913784 TGCTAAAATTTACTCCCTCCGTT 58.086 39.130 0.00 0.00 0.00 4.44
6483 6702 4.939439 TGCTAAAATTTACTCCCTCCGTTC 59.061 41.667 0.00 0.00 0.00 3.95
6484 6703 5.183969 GCTAAAATTTACTCCCTCCGTTCT 58.816 41.667 0.00 0.00 0.00 3.01
6485 6704 5.646793 GCTAAAATTTACTCCCTCCGTTCTT 59.353 40.000 0.00 0.00 0.00 2.52
6486 6705 6.820152 GCTAAAATTTACTCCCTCCGTTCTTA 59.180 38.462 0.00 0.00 0.00 2.10
6487 6706 7.335171 GCTAAAATTTACTCCCTCCGTTCTTAA 59.665 37.037 0.00 0.00 0.00 1.85
6488 6707 9.223099 CTAAAATTTACTCCCTCCGTTCTTAAA 57.777 33.333 0.00 0.00 0.00 1.52
6489 6708 8.645814 AAAATTTACTCCCTCCGTTCTTAAAT 57.354 30.769 0.00 0.00 0.00 1.40
6490 6709 9.743581 AAAATTTACTCCCTCCGTTCTTAAATA 57.256 29.630 0.00 0.00 0.00 1.40
6491 6710 9.916360 AAATTTACTCCCTCCGTTCTTAAATAT 57.084 29.630 0.00 0.00 0.00 1.28
6495 6714 7.672122 ACTCCCTCCGTTCTTAAATATAAGT 57.328 36.000 0.00 0.00 39.65 2.24
6496 6715 7.724287 ACTCCCTCCGTTCTTAAATATAAGTC 58.276 38.462 0.00 0.00 39.65 3.01
6497 6716 7.564292 ACTCCCTCCGTTCTTAAATATAAGTCT 59.436 37.037 0.00 0.00 39.65 3.24
6498 6717 8.315220 TCCCTCCGTTCTTAAATATAAGTCTT 57.685 34.615 0.00 0.00 39.65 3.01
6499 6718 8.765517 TCCCTCCGTTCTTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 39.65 2.52
6500 6719 9.392259 CCCTCCGTTCTTAAATATAAGTCTTTT 57.608 33.333 0.00 0.00 39.65 2.27
6503 6722 9.729281 TCCGTTCTTAAATATAAGTCTTTTGGT 57.271 29.630 0.00 0.00 39.65 3.67
6504 6723 9.983804 CCGTTCTTAAATATAAGTCTTTTGGTC 57.016 33.333 0.00 0.00 39.65 4.02
6505 6724 9.685005 CGTTCTTAAATATAAGTCTTTTGGTCG 57.315 33.333 0.00 0.00 39.65 4.79
6506 6725 9.486857 GTTCTTAAATATAAGTCTTTTGGTCGC 57.513 33.333 0.00 0.00 39.65 5.19
6507 6726 9.444600 TTCTTAAATATAAGTCTTTTGGTCGCT 57.555 29.630 0.00 0.00 39.65 4.93
6508 6727 9.095065 TCTTAAATATAAGTCTTTTGGTCGCTC 57.905 33.333 0.00 0.00 39.65 5.03
6509 6728 6.679327 AAATATAAGTCTTTTGGTCGCTCC 57.321 37.500 0.00 0.00 0.00 4.70
6510 6729 2.467566 TAAGTCTTTTGGTCGCTCCC 57.532 50.000 0.00 0.00 34.77 4.30
6511 6730 0.602905 AAGTCTTTTGGTCGCTCCCG 60.603 55.000 0.00 0.00 34.77 5.14
6512 6731 2.358247 TCTTTTGGTCGCTCCCGC 60.358 61.111 0.00 0.00 34.77 6.13
6513 6732 2.668212 CTTTTGGTCGCTCCCGCA 60.668 61.111 0.00 0.00 35.30 5.69
6514 6733 2.668212 TTTTGGTCGCTCCCGCAG 60.668 61.111 0.00 0.00 35.30 5.18
6535 6754 4.260355 CGACTCGGGCGGCGATAA 62.260 66.667 12.98 0.00 0.00 1.75
6536 6755 2.657620 GACTCGGGCGGCGATAAC 60.658 66.667 12.98 0.00 0.00 1.89
6537 6756 4.217159 ACTCGGGCGGCGATAACC 62.217 66.667 12.98 5.61 0.00 2.85
6538 6757 4.963428 CTCGGGCGGCGATAACCC 62.963 72.222 12.98 11.13 40.51 4.11
6540 6759 3.608662 CGGGCGGCGATAACCCTA 61.609 66.667 12.98 0.00 41.86 3.53
6541 6760 2.342648 GGGCGGCGATAACCCTAG 59.657 66.667 12.98 0.00 40.75 3.02
6542 6761 2.357154 GGCGGCGATAACCCTAGC 60.357 66.667 12.98 0.00 0.00 3.42
6543 6762 2.357154 GCGGCGATAACCCTAGCC 60.357 66.667 12.98 0.00 45.67 3.93
6545 6764 2.357154 GGCGATAACCCTAGCCGC 60.357 66.667 0.00 0.00 44.45 6.53
6546 6765 2.357154 GCGATAACCCTAGCCGCC 60.357 66.667 0.00 0.00 39.97 6.13
6547 6766 2.049433 CGATAACCCTAGCCGCCG 60.049 66.667 0.00 0.00 0.00 6.46
6548 6767 2.357154 GATAACCCTAGCCGCCGC 60.357 66.667 0.00 0.00 0.00 6.53
6549 6768 3.878374 GATAACCCTAGCCGCCGCC 62.878 68.421 0.00 0.00 34.57 6.13
6577 6796 3.711782 CCCCCTTCCCCTCTCCCT 61.712 72.222 0.00 0.00 0.00 4.20
6578 6797 2.461637 CCCCTTCCCCTCTCCCTT 59.538 66.667 0.00 0.00 0.00 3.95
6579 6798 2.003548 CCCCTTCCCCTCTCCCTTG 61.004 68.421 0.00 0.00 0.00 3.61
6580 6799 2.684499 CCCTTCCCCTCTCCCTTGC 61.684 68.421 0.00 0.00 0.00 4.01
6581 6800 2.684499 CCTTCCCCTCTCCCTTGCC 61.684 68.421 0.00 0.00 0.00 4.52
6582 6801 1.925455 CTTCCCCTCTCCCTTGCCA 60.925 63.158 0.00 0.00 0.00 4.92
6583 6802 2.203549 CTTCCCCTCTCCCTTGCCAC 62.204 65.000 0.00 0.00 0.00 5.01
6584 6803 3.732849 CCCCTCTCCCTTGCCACC 61.733 72.222 0.00 0.00 0.00 4.61
6585 6804 2.935481 CCCTCTCCCTTGCCACCA 60.935 66.667 0.00 0.00 0.00 4.17
6586 6805 2.352805 CCTCTCCCTTGCCACCAC 59.647 66.667 0.00 0.00 0.00 4.16
6587 6806 2.352805 CTCTCCCTTGCCACCACC 59.647 66.667 0.00 0.00 0.00 4.61
6588 6807 3.612247 CTCTCCCTTGCCACCACCG 62.612 68.421 0.00 0.00 0.00 4.94
6589 6808 4.722700 CTCCCTTGCCACCACCGG 62.723 72.222 0.00 0.00 0.00 5.28
6591 6810 4.047125 CCCTTGCCACCACCGGAT 62.047 66.667 9.46 0.00 0.00 4.18
6592 6811 2.751436 CCTTGCCACCACCGGATG 60.751 66.667 9.46 2.15 0.00 3.51
6605 6824 2.045731 GGATGGGGTCGCCGAAAA 60.046 61.111 0.87 0.00 0.00 2.29
6606 6825 2.112815 GGATGGGGTCGCCGAAAAG 61.113 63.158 0.87 0.00 0.00 2.27
6607 6826 2.750237 ATGGGGTCGCCGAAAAGC 60.750 61.111 0.87 0.00 0.00 3.51
6618 6837 4.364409 GAAAAGCCGCGCGTTCGT 62.364 61.111 29.95 15.20 38.14 3.85
6619 6838 4.364409 AAAAGCCGCGCGTTCGTC 62.364 61.111 29.95 11.76 38.14 4.20
6628 6847 4.353437 GCGTTCGTCGGTGAGGGT 62.353 66.667 0.00 0.00 40.26 4.34
6629 6848 2.430244 CGTTCGTCGGTGAGGGTG 60.430 66.667 0.00 0.00 35.71 4.61
6630 6849 2.048503 GTTCGTCGGTGAGGGTGG 60.049 66.667 0.00 0.00 0.00 4.61
6631 6850 2.522436 TTCGTCGGTGAGGGTGGT 60.522 61.111 0.00 0.00 0.00 4.16
6632 6851 2.863346 TTCGTCGGTGAGGGTGGTG 61.863 63.158 0.00 0.00 0.00 4.17
6633 6852 4.373116 CGTCGGTGAGGGTGGTGG 62.373 72.222 0.00 0.00 0.00 4.61
6634 6853 4.699522 GTCGGTGAGGGTGGTGGC 62.700 72.222 0.00 0.00 0.00 5.01
6637 6856 4.394712 GGTGAGGGTGGTGGCGAG 62.395 72.222 0.00 0.00 0.00 5.03
6638 6857 4.394712 GTGAGGGTGGTGGCGAGG 62.395 72.222 0.00 0.00 0.00 4.63
6639 6858 4.631740 TGAGGGTGGTGGCGAGGA 62.632 66.667 0.00 0.00 0.00 3.71
6640 6859 3.083997 GAGGGTGGTGGCGAGGAT 61.084 66.667 0.00 0.00 0.00 3.24
6641 6860 2.610859 AGGGTGGTGGCGAGGATT 60.611 61.111 0.00 0.00 0.00 3.01
6642 6861 2.198304 GAGGGTGGTGGCGAGGATTT 62.198 60.000 0.00 0.00 0.00 2.17
6643 6862 2.046285 GGGTGGTGGCGAGGATTTG 61.046 63.158 0.00 0.00 0.00 2.32
6644 6863 1.303317 GGTGGTGGCGAGGATTTGT 60.303 57.895 0.00 0.00 0.00 2.83
6645 6864 1.305930 GGTGGTGGCGAGGATTTGTC 61.306 60.000 0.00 0.00 0.00 3.18
6646 6865 1.002624 TGGTGGCGAGGATTTGTCC 60.003 57.895 0.00 0.00 0.00 4.02
6647 6866 2.106683 GGTGGCGAGGATTTGTCCG 61.107 63.158 0.00 0.00 34.28 4.79
6648 6867 2.435938 TGGCGAGGATTTGTCCGC 60.436 61.111 0.00 0.00 46.04 5.54
6650 6869 2.125106 GCGAGGATTTGTCCGCCT 60.125 61.111 0.00 0.00 41.59 5.52
6651 6870 2.464459 GCGAGGATTTGTCCGCCTG 61.464 63.158 0.00 0.00 41.59 4.85
6652 6871 2.464459 CGAGGATTTGTCCGCCTGC 61.464 63.158 0.00 0.00 34.28 4.85
6653 6872 1.078143 GAGGATTTGTCCGCCTGCT 60.078 57.895 0.00 0.00 34.28 4.24
6654 6873 0.678048 GAGGATTTGTCCGCCTGCTT 60.678 55.000 0.00 0.00 34.28 3.91
6655 6874 0.678048 AGGATTTGTCCGCCTGCTTC 60.678 55.000 0.00 0.00 34.28 3.86
6656 6875 1.425428 GATTTGTCCGCCTGCTTCG 59.575 57.895 0.00 0.00 0.00 3.79
6657 6876 2.583685 GATTTGTCCGCCTGCTTCGC 62.584 60.000 0.00 0.00 0.00 4.70
6673 6892 3.752339 GCGCAAGGGGCTTTGGAG 61.752 66.667 0.30 0.00 41.67 3.86
6704 6923 4.619227 CTCGGGTGGTGGTGCGTT 62.619 66.667 0.00 0.00 0.00 4.84
6705 6924 4.920112 TCGGGTGGTGGTGCGTTG 62.920 66.667 0.00 0.00 0.00 4.10
6706 6925 4.920112 CGGGTGGTGGTGCGTTGA 62.920 66.667 0.00 0.00 0.00 3.18
6707 6926 2.282180 GGGTGGTGGTGCGTTGAT 60.282 61.111 0.00 0.00 0.00 2.57
6708 6927 2.625823 GGGTGGTGGTGCGTTGATG 61.626 63.158 0.00 0.00 0.00 3.07
6709 6928 1.896660 GGTGGTGGTGCGTTGATGT 60.897 57.895 0.00 0.00 0.00 3.06
6710 6929 1.574428 GTGGTGGTGCGTTGATGTC 59.426 57.895 0.00 0.00 0.00 3.06
6711 6930 0.884704 GTGGTGGTGCGTTGATGTCT 60.885 55.000 0.00 0.00 0.00 3.41
6712 6931 0.179032 TGGTGGTGCGTTGATGTCTT 60.179 50.000 0.00 0.00 0.00 3.01
6713 6932 0.517316 GGTGGTGCGTTGATGTCTTC 59.483 55.000 0.00 0.00 0.00 2.87
6714 6933 1.225855 GTGGTGCGTTGATGTCTTCA 58.774 50.000 0.00 0.00 0.00 3.02
6715 6934 1.195448 GTGGTGCGTTGATGTCTTCAG 59.805 52.381 0.00 0.00 35.27 3.02
6716 6935 0.798776 GGTGCGTTGATGTCTTCAGG 59.201 55.000 0.00 0.00 35.27 3.86
6717 6936 1.512926 GTGCGTTGATGTCTTCAGGT 58.487 50.000 0.00 0.00 35.27 4.00
6718 6937 1.195448 GTGCGTTGATGTCTTCAGGTG 59.805 52.381 0.00 0.00 35.27 4.00
6719 6938 0.798776 GCGTTGATGTCTTCAGGTGG 59.201 55.000 0.00 0.00 35.27 4.61
6720 6939 0.798776 CGTTGATGTCTTCAGGTGGC 59.201 55.000 0.00 0.00 35.27 5.01
6721 6940 0.798776 GTTGATGTCTTCAGGTGGCG 59.201 55.000 0.00 0.00 35.27 5.69
6722 6941 0.321564 TTGATGTCTTCAGGTGGCGG 60.322 55.000 0.00 0.00 35.27 6.13
6723 6942 1.296715 GATGTCTTCAGGTGGCGGT 59.703 57.895 0.00 0.00 0.00 5.68
6724 6943 0.741221 GATGTCTTCAGGTGGCGGTC 60.741 60.000 0.00 0.00 0.00 4.79
6725 6944 2.432628 GTCTTCAGGTGGCGGTCG 60.433 66.667 0.00 0.00 0.00 4.79
6726 6945 2.915659 TCTTCAGGTGGCGGTCGT 60.916 61.111 0.00 0.00 0.00 4.34
6727 6946 2.432628 CTTCAGGTGGCGGTCGTC 60.433 66.667 0.00 0.00 0.00 4.20
6728 6947 4.351938 TTCAGGTGGCGGTCGTCG 62.352 66.667 0.00 0.00 42.76 5.12
6739 6958 4.664677 GTCGTCGCTGGTGCTGGT 62.665 66.667 0.00 0.00 36.97 4.00
6740 6959 4.357947 TCGTCGCTGGTGCTGGTC 62.358 66.667 0.00 0.00 36.97 4.02
6792 7011 4.704833 CGGGTGGTGGCTGTGAGG 62.705 72.222 0.00 0.00 0.00 3.86
6795 7014 4.626081 GTGGTGGCTGTGAGGCGT 62.626 66.667 0.00 0.00 44.78 5.68
6796 7015 4.624364 TGGTGGCTGTGAGGCGTG 62.624 66.667 0.00 0.00 44.78 5.34
6798 7017 4.626081 GTGGCTGTGAGGCGTGGT 62.626 66.667 0.00 0.00 44.78 4.16
6799 7018 4.624364 TGGCTGTGAGGCGTGGTG 62.624 66.667 0.00 0.00 44.78 4.17
6833 7052 3.917760 CCCCGGATCTGACGCCTC 61.918 72.222 0.73 0.00 0.00 4.70
6834 7053 3.917760 CCCGGATCTGACGCCTCC 61.918 72.222 0.73 0.00 0.00 4.30
6836 7055 4.933064 CGGATCTGACGCCTCCGC 62.933 72.222 4.67 0.00 44.65 5.54
6837 7056 4.593864 GGATCTGACGCCTCCGCC 62.594 72.222 0.00 0.00 38.22 6.13
6838 7057 4.593864 GATCTGACGCCTCCGCCC 62.594 72.222 0.00 0.00 38.22 6.13
6848 7067 3.966543 CTCCGCCCCCAACCTGTT 61.967 66.667 0.00 0.00 0.00 3.16
6849 7068 3.920093 CTCCGCCCCCAACCTGTTC 62.920 68.421 0.00 0.00 0.00 3.18
6855 7074 3.966543 CCCAACCTGTTCGGCCCT 61.967 66.667 0.00 0.00 35.61 5.19
6856 7075 2.672996 CCAACCTGTTCGGCCCTG 60.673 66.667 0.00 0.00 35.61 4.45
6857 7076 2.113139 CAACCTGTTCGGCCCTGT 59.887 61.111 0.00 0.00 35.61 4.00
6858 7077 1.966451 CAACCTGTTCGGCCCTGTC 60.966 63.158 0.00 0.00 35.61 3.51
6859 7078 2.448582 AACCTGTTCGGCCCTGTCA 61.449 57.895 0.00 0.00 35.61 3.58
6860 7079 2.046892 CCTGTTCGGCCCTGTCAG 60.047 66.667 0.00 0.83 0.00 3.51
6861 7080 2.583441 CCTGTTCGGCCCTGTCAGA 61.583 63.158 0.00 0.00 0.00 3.27
6862 7081 1.599047 CTGTTCGGCCCTGTCAGAT 59.401 57.895 0.00 0.00 0.00 2.90
6863 7082 0.460987 CTGTTCGGCCCTGTCAGATC 60.461 60.000 0.00 0.00 0.00 2.75
6864 7083 0.904865 TGTTCGGCCCTGTCAGATCT 60.905 55.000 0.00 0.00 0.00 2.75
6865 7084 1.112113 GTTCGGCCCTGTCAGATCTA 58.888 55.000 0.00 0.00 0.00 1.98
6866 7085 1.067821 GTTCGGCCCTGTCAGATCTAG 59.932 57.143 0.00 0.00 0.00 2.43
6867 7086 0.259065 TCGGCCCTGTCAGATCTAGT 59.741 55.000 0.00 0.00 0.00 2.57
6868 7087 1.115467 CGGCCCTGTCAGATCTAGTT 58.885 55.000 0.00 0.00 0.00 2.24
6869 7088 1.482593 CGGCCCTGTCAGATCTAGTTT 59.517 52.381 0.00 0.00 0.00 2.66
6870 7089 2.482142 CGGCCCTGTCAGATCTAGTTTC 60.482 54.545 0.00 0.00 0.00 2.78
6871 7090 2.158885 GGCCCTGTCAGATCTAGTTTCC 60.159 54.545 0.00 0.00 0.00 3.13
6872 7091 2.482142 GCCCTGTCAGATCTAGTTTCCG 60.482 54.545 0.00 0.00 0.00 4.30
6873 7092 2.101582 CCCTGTCAGATCTAGTTTCCGG 59.898 54.545 0.00 0.00 0.00 5.14
6874 7093 2.482142 CCTGTCAGATCTAGTTTCCGGC 60.482 54.545 0.00 0.00 0.00 6.13
6875 7094 2.428890 CTGTCAGATCTAGTTTCCGGCT 59.571 50.000 0.00 0.00 0.00 5.52
6876 7095 2.166459 TGTCAGATCTAGTTTCCGGCTG 59.834 50.000 0.00 0.00 0.00 4.85
6877 7096 1.757118 TCAGATCTAGTTTCCGGCTGG 59.243 52.381 4.71 4.71 0.00 4.85
6878 7097 0.466124 AGATCTAGTTTCCGGCTGGC 59.534 55.000 6.73 0.00 34.14 4.85
6879 7098 0.533085 GATCTAGTTTCCGGCTGGCC 60.533 60.000 6.73 0.00 34.14 5.36
6880 7099 0.983378 ATCTAGTTTCCGGCTGGCCT 60.983 55.000 6.73 5.06 34.14 5.19
6881 7100 0.324923 TCTAGTTTCCGGCTGGCCTA 60.325 55.000 6.73 6.02 34.14 3.93
6882 7101 0.105039 CTAGTTTCCGGCTGGCCTAG 59.895 60.000 6.73 11.93 34.14 3.02
6883 7102 1.335132 TAGTTTCCGGCTGGCCTAGG 61.335 60.000 6.73 3.67 34.14 3.02
6884 7103 2.609610 TTTCCGGCTGGCCTAGGT 60.610 61.111 11.31 0.00 34.14 3.08
6885 7104 2.666098 TTTCCGGCTGGCCTAGGTC 61.666 63.158 6.37 6.37 34.14 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.123902 TCTAAATTGAGCATATGCAACAATACT 57.876 29.630 32.59 27.21 43.51 2.12
46 47 9.903682 ATCTAAATTGAGCATATGCAACAATAC 57.096 29.630 32.59 17.26 43.51 1.89
48 49 9.903682 GTATCTAAATTGAGCATATGCAACAAT 57.096 29.630 29.82 29.82 44.87 2.71
49 50 9.123902 AGTATCTAAATTGAGCATATGCAACAA 57.876 29.630 28.68 28.68 45.16 2.83
50 51 8.681486 AGTATCTAAATTGAGCATATGCAACA 57.319 30.769 28.62 23.14 45.16 3.33
51 52 9.956720 AAAGTATCTAAATTGAGCATATGCAAC 57.043 29.630 28.62 21.02 45.16 4.17
58 59 9.162764 ACACGTAAAAGTATCTAAATTGAGCAT 57.837 29.630 0.00 0.00 0.00 3.79
59 60 8.542497 ACACGTAAAAGTATCTAAATTGAGCA 57.458 30.769 0.00 0.00 0.00 4.26
60 61 9.897349 GTACACGTAAAAGTATCTAAATTGAGC 57.103 33.333 0.00 0.00 0.00 4.26
68 69 9.102757 CCTCACTAGTACACGTAAAAGTATCTA 57.897 37.037 0.00 0.00 0.00 1.98
69 70 7.609532 ACCTCACTAGTACACGTAAAAGTATCT 59.390 37.037 0.00 0.00 0.00 1.98
70 71 7.756558 ACCTCACTAGTACACGTAAAAGTATC 58.243 38.462 0.00 0.00 0.00 2.24
71 72 7.693969 ACCTCACTAGTACACGTAAAAGTAT 57.306 36.000 0.00 0.00 0.00 2.12
72 73 8.792830 ATACCTCACTAGTACACGTAAAAGTA 57.207 34.615 0.00 0.00 0.00 2.24
73 74 7.693969 ATACCTCACTAGTACACGTAAAAGT 57.306 36.000 0.00 0.00 0.00 2.66
74 75 8.887717 ACTATACCTCACTAGTACACGTAAAAG 58.112 37.037 0.00 0.34 0.00 2.27
75 76 8.792830 ACTATACCTCACTAGTACACGTAAAA 57.207 34.615 0.00 0.00 0.00 1.52
76 77 8.040727 TGACTATACCTCACTAGTACACGTAAA 58.959 37.037 0.00 0.00 0.00 2.01
77 78 7.555965 TGACTATACCTCACTAGTACACGTAA 58.444 38.462 0.00 0.00 0.00 3.18
78 79 7.112452 TGACTATACCTCACTAGTACACGTA 57.888 40.000 0.00 0.00 0.00 3.57
79 80 5.982356 TGACTATACCTCACTAGTACACGT 58.018 41.667 0.00 0.00 0.00 4.49
80 81 6.538021 ACTTGACTATACCTCACTAGTACACG 59.462 42.308 0.00 0.00 0.00 4.49
81 82 7.862512 ACTTGACTATACCTCACTAGTACAC 57.137 40.000 0.00 0.00 0.00 2.90
82 83 9.964354 TTTACTTGACTATACCTCACTAGTACA 57.036 33.333 0.00 0.00 0.00 2.90
99 100 8.898792 GTCGTTTTGTCCAATATTTTACTTGAC 58.101 33.333 0.00 0.00 0.00 3.18
124 125 2.024176 AAAGTGTGAGCGAAGTGTGT 57.976 45.000 0.00 0.00 0.00 3.72
324 325 3.805422 ACAAACTGAGCATGCAACAAATG 59.195 39.130 21.98 17.60 0.00 2.32
325 326 4.062677 ACAAACTGAGCATGCAACAAAT 57.937 36.364 21.98 7.82 0.00 2.32
326 327 3.523606 ACAAACTGAGCATGCAACAAA 57.476 38.095 21.98 0.00 0.00 2.83
327 328 4.852134 ATACAAACTGAGCATGCAACAA 57.148 36.364 21.98 4.01 0.00 2.83
328 329 5.003160 AGTATACAAACTGAGCATGCAACA 58.997 37.500 21.98 17.77 0.00 3.33
329 330 5.551760 AGTATACAAACTGAGCATGCAAC 57.448 39.130 21.98 13.92 0.00 4.17
330 331 6.573664 AAAGTATACAAACTGAGCATGCAA 57.426 33.333 21.98 6.70 0.00 4.08
331 332 6.573664 AAAAGTATACAAACTGAGCATGCA 57.426 33.333 21.98 0.00 0.00 3.96
332 333 7.526608 TGTAAAAGTATACAAACTGAGCATGC 58.473 34.615 10.51 10.51 33.02 4.06
333 334 9.494479 CATGTAAAAGTATACAAACTGAGCATG 57.506 33.333 5.50 5.68 39.12 4.06
334 335 9.231297 ACATGTAAAAGTATACAAACTGAGCAT 57.769 29.630 5.50 0.00 39.12 3.79
335 336 8.615878 ACATGTAAAAGTATACAAACTGAGCA 57.384 30.769 5.50 0.00 39.12 4.26
336 337 9.968743 GTACATGTAAAAGTATACAAACTGAGC 57.031 33.333 7.25 0.00 39.12 4.26
342 343 9.603921 GGGCTAGTACATGTAAAAGTATACAAA 57.396 33.333 7.25 0.00 39.12 2.83
343 344 8.206189 GGGGCTAGTACATGTAAAAGTATACAA 58.794 37.037 7.25 0.00 39.12 2.41
458 478 2.762887 CACTCTAATGCCTCTGTCCTGA 59.237 50.000 0.00 0.00 0.00 3.86
520 540 7.161404 TGTCACATTCATGTTAAACTAGAGCT 58.839 34.615 0.00 0.00 39.39 4.09
527 547 6.359617 CGGAAACTGTCACATTCATGTTAAAC 59.640 38.462 0.00 0.00 39.39 2.01
560 580 2.006888 CCGGAAATGATGTGCTACGTT 58.993 47.619 0.00 0.00 0.00 3.99
563 583 3.487544 GCTTTCCGGAAATGATGTGCTAC 60.488 47.826 29.05 6.10 0.00 3.58
568 591 2.214376 TGGCTTTCCGGAAATGATGT 57.786 45.000 29.05 0.00 34.14 3.06
569 592 2.417243 GGTTGGCTTTCCGGAAATGATG 60.417 50.000 29.05 18.34 34.14 3.07
577 600 3.242936 CGTATAATTGGTTGGCTTTCCGG 60.243 47.826 0.00 0.00 34.14 5.14
683 722 0.251653 TCTGCCTCCCGTCTTACAGT 60.252 55.000 0.00 0.00 0.00 3.55
690 733 1.066587 CTTCGATCTGCCTCCCGTC 59.933 63.158 0.00 0.00 0.00 4.79
813 859 3.067011 GGGGGCTATAAAATGGGGC 57.933 57.895 0.00 0.00 0.00 5.80
1122 1190 2.202623 AATCACGCGACTCGGAGC 60.203 61.111 15.93 0.00 43.86 4.70
1123 1191 2.508891 GCAATCACGCGACTCGGAG 61.509 63.158 15.93 2.83 43.86 4.63
1124 1192 2.506217 GCAATCACGCGACTCGGA 60.506 61.111 15.93 2.03 43.86 4.55
1164 1232 4.089636 GAAGCTTACTTCCTCGTACAAACG 59.910 45.833 0.00 0.00 46.69 3.60
1570 1647 2.643551 ACTAGCGAACCCAAATGGATG 58.356 47.619 0.00 0.00 37.39 3.51
1723 1804 0.108329 ACACGGAAATCTACTGCCCG 60.108 55.000 0.00 0.00 45.09 6.13
1725 1806 1.732259 CACACACGGAAATCTACTGCC 59.268 52.381 0.00 0.00 0.00 4.85
1727 1808 2.346803 CCCACACACGGAAATCTACTG 58.653 52.381 0.00 0.00 0.00 2.74
1847 1928 0.249911 AGCTGGACGACTCCAACAAC 60.250 55.000 0.00 0.00 46.63 3.32
1930 2018 7.066525 CCCAGATCCGCTTTAAAGTATAACAAA 59.933 37.037 16.38 0.00 0.00 2.83
1939 2027 3.626217 GGTAACCCAGATCCGCTTTAAAG 59.374 47.826 11.02 11.02 0.00 1.85
1976 2064 4.836736 TGCTCAACTACTAACAACCTACCT 59.163 41.667 0.00 0.00 0.00 3.08
2043 2149 8.908786 TTTTGCCAGATTAGAATATACTCCAG 57.091 34.615 0.00 0.00 0.00 3.86
2068 2174 4.046286 TGTTGTGGGCCAGATTATCTTT 57.954 40.909 6.40 0.00 0.00 2.52
2216 2392 3.575256 TCCTTGCTGAAGTTACCGTTCTA 59.425 43.478 0.00 0.00 0.00 2.10
2247 2425 5.047164 TCAAATTCTCATGGTCAATTGGGTG 60.047 40.000 5.42 0.25 0.00 4.61
2261 2439 8.020819 CGGCAGTAAAGTTTTATCAAATTCTCA 58.979 33.333 0.00 0.00 0.00 3.27
2329 2507 1.268692 CGAATCATGGCCGTTCATTGG 60.269 52.381 0.00 0.00 0.00 3.16
2411 2589 4.836175 TCAGAAGTGTATAACCACTGTGGA 59.164 41.667 32.30 12.33 44.74 4.02
2424 2602 2.723273 TGCGGATCTCTCAGAAGTGTA 58.277 47.619 0.00 0.00 0.00 2.90
2427 2605 2.100584 GTGATGCGGATCTCTCAGAAGT 59.899 50.000 18.23 0.00 0.00 3.01
2546 2724 6.000219 AGCTTATATTGGCTAGTGATGGTTG 59.000 40.000 1.06 0.00 37.00 3.77
2648 2826 0.250166 GCAACGGGACCTTGTACTGT 60.250 55.000 0.00 0.00 37.63 3.55
2805 2985 4.267349 ACAAATTGACTACGTAGGTGCT 57.733 40.909 25.63 5.31 0.00 4.40
2811 2991 5.994887 AACTGCAACAAATTGACTACGTA 57.005 34.783 0.00 0.00 38.15 3.57
2906 3086 6.984474 CCTCCACGTTATCAATTAGAAGCTTA 59.016 38.462 0.00 0.00 0.00 3.09
3087 3270 3.220110 CCTCCAATCAGTCCCAATGATG 58.780 50.000 0.00 0.00 37.46 3.07
3113 3296 1.281867 TCAATGACCTTGCCCCTACAG 59.718 52.381 0.00 0.00 34.66 2.74
3122 3305 2.416547 CCTTAGCACGTCAATGACCTTG 59.583 50.000 7.91 6.55 36.09 3.61
3410 3615 6.760298 TGATTGTTTTTGCAGCTTGTTGATAA 59.240 30.769 0.00 0.00 0.00 1.75
3523 3728 1.134367 CGAAGCCCGATGTAGAACTCA 59.866 52.381 0.00 0.00 41.76 3.41
3718 3924 2.303022 TGAACTGACCTGGATGAGAACC 59.697 50.000 0.00 0.00 0.00 3.62
3976 4183 4.505191 CACAGAAGGCAACAAACTGAAATG 59.495 41.667 0.00 0.00 36.96 2.32
4075 4282 1.553690 GCTCTGCTAGGGTTCCACCA 61.554 60.000 0.00 0.00 41.02 4.17
4709 4922 7.888021 AGGTCTGATGGACTACAGAGATAATAG 59.112 40.741 0.00 0.00 42.56 1.73
4859 5072 1.546029 TCAACTGTCTCACTGATCCCG 59.454 52.381 0.00 0.00 0.00 5.14
5178 5392 5.705609 TTGCATCTTTTAGTGAACCCTTC 57.294 39.130 0.00 0.00 0.00 3.46
5211 5425 1.340017 ACTGCACGACCCTGCAAATAT 60.340 47.619 0.00 0.00 46.46 1.28
5241 5455 0.107831 CAGGGTCAAACGGACTTCCA 59.892 55.000 0.00 0.00 46.16 3.53
5310 5524 1.250154 TGCCCCGCATTGGAAAAGAG 61.250 55.000 0.00 0.00 42.00 2.85
5343 5558 8.860088 ACATTTATTTTGACTAAGCAGGACTTT 58.140 29.630 0.00 0.00 39.97 2.66
5367 5582 5.491070 CCAGACAATCAGGTATGAAGAACA 58.509 41.667 0.00 0.00 39.39 3.18
5737 5953 0.899720 GGGTGTCGGAGAACATACCA 59.100 55.000 0.00 0.00 39.69 3.25
5811 6029 2.669569 GAGTCGCCAAGCCTGCAA 60.670 61.111 0.00 0.00 0.00 4.08
5959 6177 1.083401 CGACAGACAACAACAGCGC 60.083 57.895 0.00 0.00 0.00 5.92
5988 6206 0.803768 AGATACGACTTGCAGCAGCG 60.804 55.000 11.42 11.42 46.23 5.18
5999 6217 8.010540 CGGCATATATGTATAGACAGATACGAC 58.989 40.741 14.14 0.62 41.36 4.34
6029 6247 2.206750 TCTTCCACAGCGTTACAACAC 58.793 47.619 0.00 0.00 0.00 3.32
6073 6291 5.049167 ACCTACACGAATAACAAACGTTGA 58.951 37.500 0.00 0.00 38.18 3.18
6103 6321 5.466819 TCTGTGTCCTTATTACACTCGTTG 58.533 41.667 7.75 0.00 45.95 4.10
6343 6561 4.966965 TGTGTCACAAAAATTACACGGT 57.033 36.364 2.31 0.00 44.03 4.83
6413 6631 6.233434 TCACATGATAATAGATCCAAGCCAC 58.767 40.000 0.00 0.00 0.00 5.01
6433 6651 3.437344 CCCTTTTACCTCCCCTTTTCACA 60.437 47.826 0.00 0.00 0.00 3.58
6451 6669 5.360999 GGAGTAAATTTTAGCATGCTCCCTT 59.639 40.000 26.57 13.69 36.26 3.95
6473 6692 7.909485 AGACTTATATTTAAGAACGGAGGGA 57.091 36.000 9.58 0.00 38.56 4.20
6474 6693 8.959705 AAAGACTTATATTTAAGAACGGAGGG 57.040 34.615 9.58 0.00 38.56 4.30
6477 6696 9.729281 ACCAAAAGACTTATATTTAAGAACGGA 57.271 29.630 9.58 0.00 38.56 4.69
6478 6697 9.983804 GACCAAAAGACTTATATTTAAGAACGG 57.016 33.333 9.58 4.36 38.56 4.44
6479 6698 9.685005 CGACCAAAAGACTTATATTTAAGAACG 57.315 33.333 9.58 0.00 38.56 3.95
6480 6699 9.486857 GCGACCAAAAGACTTATATTTAAGAAC 57.513 33.333 9.58 4.13 38.56 3.01
6481 6700 9.444600 AGCGACCAAAAGACTTATATTTAAGAA 57.555 29.630 9.58 0.00 38.56 2.52
6482 6701 9.095065 GAGCGACCAAAAGACTTATATTTAAGA 57.905 33.333 9.58 0.00 38.56 2.10
6483 6702 8.336080 GGAGCGACCAAAAGACTTATATTTAAG 58.664 37.037 1.79 1.79 38.65 1.85
6484 6703 7.281549 GGGAGCGACCAAAAGACTTATATTTAA 59.718 37.037 5.45 0.00 41.20 1.52
6485 6704 6.764560 GGGAGCGACCAAAAGACTTATATTTA 59.235 38.462 5.45 0.00 41.20 1.40
6486 6705 5.589050 GGGAGCGACCAAAAGACTTATATTT 59.411 40.000 5.45 0.00 41.20 1.40
6487 6706 5.123936 GGGAGCGACCAAAAGACTTATATT 58.876 41.667 5.45 0.00 41.20 1.28
6488 6707 4.704965 GGGAGCGACCAAAAGACTTATAT 58.295 43.478 5.45 0.00 41.20 0.86
6489 6708 3.429822 CGGGAGCGACCAAAAGACTTATA 60.430 47.826 5.45 0.00 41.20 0.98
6490 6709 2.677037 CGGGAGCGACCAAAAGACTTAT 60.677 50.000 5.45 0.00 41.20 1.73
6491 6710 1.337447 CGGGAGCGACCAAAAGACTTA 60.337 52.381 5.45 0.00 41.20 2.24
6492 6711 0.602905 CGGGAGCGACCAAAAGACTT 60.603 55.000 5.45 0.00 41.20 3.01
6493 6712 1.004918 CGGGAGCGACCAAAAGACT 60.005 57.895 5.45 0.00 41.20 3.24
6494 6713 3.562635 CGGGAGCGACCAAAAGAC 58.437 61.111 5.45 0.00 41.20 3.01
6523 6742 3.569049 CTAGGGTTATCGCCGCCCG 62.569 68.421 0.00 0.00 46.69 6.13
6524 6743 2.342648 CTAGGGTTATCGCCGCCC 59.657 66.667 0.00 0.00 42.64 6.13
6525 6744 2.357154 GCTAGGGTTATCGCCGCC 60.357 66.667 0.00 0.00 0.00 6.13
6526 6745 2.357154 GGCTAGGGTTATCGCCGC 60.357 66.667 0.00 0.00 32.22 6.53
6528 6747 2.357154 GCGGCTAGGGTTATCGCC 60.357 66.667 0.00 0.00 40.44 5.54
6529 6748 2.357154 GGCGGCTAGGGTTATCGC 60.357 66.667 0.00 0.00 44.80 4.58
6530 6749 2.049433 CGGCGGCTAGGGTTATCG 60.049 66.667 7.61 0.00 0.00 2.92
6531 6750 2.357154 GCGGCGGCTAGGGTTATC 60.357 66.667 9.78 0.00 35.83 1.75
6532 6751 3.937447 GGCGGCGGCTAGGGTTAT 61.937 66.667 27.22 0.00 39.81 1.89
6560 6779 3.289454 AAGGGAGAGGGGAAGGGGG 62.289 68.421 0.00 0.00 0.00 5.40
6561 6780 2.003548 CAAGGGAGAGGGGAAGGGG 61.004 68.421 0.00 0.00 0.00 4.79
6562 6781 2.684499 GCAAGGGAGAGGGGAAGGG 61.684 68.421 0.00 0.00 0.00 3.95
6563 6782 2.684499 GGCAAGGGAGAGGGGAAGG 61.684 68.421 0.00 0.00 0.00 3.46
6564 6783 1.925455 TGGCAAGGGAGAGGGGAAG 60.925 63.158 0.00 0.00 0.00 3.46
6565 6784 2.209809 TGGCAAGGGAGAGGGGAA 59.790 61.111 0.00 0.00 0.00 3.97
6566 6785 2.610859 GTGGCAAGGGAGAGGGGA 60.611 66.667 0.00 0.00 0.00 4.81
6567 6786 3.732849 GGTGGCAAGGGAGAGGGG 61.733 72.222 0.00 0.00 0.00 4.79
6568 6787 2.935481 TGGTGGCAAGGGAGAGGG 60.935 66.667 0.00 0.00 0.00 4.30
6569 6788 2.352805 GTGGTGGCAAGGGAGAGG 59.647 66.667 0.00 0.00 0.00 3.69
6570 6789 2.352805 GGTGGTGGCAAGGGAGAG 59.647 66.667 0.00 0.00 0.00 3.20
6571 6790 3.636231 CGGTGGTGGCAAGGGAGA 61.636 66.667 0.00 0.00 0.00 3.71
6572 6791 4.722700 CCGGTGGTGGCAAGGGAG 62.723 72.222 0.00 0.00 0.00 4.30
6574 6793 4.047125 ATCCGGTGGTGGCAAGGG 62.047 66.667 0.00 0.00 0.00 3.95
6575 6794 2.751436 CATCCGGTGGTGGCAAGG 60.751 66.667 0.00 0.00 0.00 3.61
6576 6795 2.751436 CCATCCGGTGGTGGCAAG 60.751 66.667 13.21 0.00 43.44 4.01
6587 6806 3.961838 TTTTCGGCGACCCCATCCG 62.962 63.158 10.16 0.00 44.16 4.18
6588 6807 2.045731 TTTTCGGCGACCCCATCC 60.046 61.111 10.16 0.00 0.00 3.51
6589 6808 2.761195 GCTTTTCGGCGACCCCATC 61.761 63.158 10.16 0.00 0.00 3.51
6590 6809 2.750237 GCTTTTCGGCGACCCCAT 60.750 61.111 10.16 0.00 0.00 4.00
6601 6820 4.364409 ACGAACGCGCGGCTTTTC 62.364 61.111 35.22 25.42 42.48 2.29
6602 6821 4.364409 GACGAACGCGCGGCTTTT 62.364 61.111 35.22 19.49 42.48 2.27
6611 6830 4.353437 ACCCTCACCGACGAACGC 62.353 66.667 0.00 0.00 41.07 4.84
6612 6831 2.430244 CACCCTCACCGACGAACG 60.430 66.667 0.00 0.00 42.18 3.95
6613 6832 2.048503 CCACCCTCACCGACGAAC 60.049 66.667 0.00 0.00 0.00 3.95
6614 6833 2.522436 ACCACCCTCACCGACGAA 60.522 61.111 0.00 0.00 0.00 3.85
6615 6834 3.299977 CACCACCCTCACCGACGA 61.300 66.667 0.00 0.00 0.00 4.20
6616 6835 4.373116 CCACCACCCTCACCGACG 62.373 72.222 0.00 0.00 0.00 5.12
6617 6836 4.699522 GCCACCACCCTCACCGAC 62.700 72.222 0.00 0.00 0.00 4.79
6620 6839 4.394712 CTCGCCACCACCCTCACC 62.395 72.222 0.00 0.00 0.00 4.02
6621 6840 4.394712 CCTCGCCACCACCCTCAC 62.395 72.222 0.00 0.00 0.00 3.51
6622 6841 3.924013 ATCCTCGCCACCACCCTCA 62.924 63.158 0.00 0.00 0.00 3.86
6623 6842 2.198304 AAATCCTCGCCACCACCCTC 62.198 60.000 0.00 0.00 0.00 4.30
6624 6843 2.231380 AAATCCTCGCCACCACCCT 61.231 57.895 0.00 0.00 0.00 4.34
6625 6844 2.046285 CAAATCCTCGCCACCACCC 61.046 63.158 0.00 0.00 0.00 4.61
6626 6845 1.303317 ACAAATCCTCGCCACCACC 60.303 57.895 0.00 0.00 0.00 4.61
6627 6846 1.305930 GGACAAATCCTCGCCACCAC 61.306 60.000 0.00 0.00 42.45 4.16
6628 6847 1.002624 GGACAAATCCTCGCCACCA 60.003 57.895 0.00 0.00 42.45 4.17
6629 6848 2.106683 CGGACAAATCCTCGCCACC 61.107 63.158 0.00 0.00 43.73 4.61
6630 6849 2.750888 GCGGACAAATCCTCGCCAC 61.751 63.158 0.00 0.00 43.73 5.01
6631 6850 2.435938 GCGGACAAATCCTCGCCA 60.436 61.111 0.00 0.00 43.73 5.69
6633 6852 2.125106 AGGCGGACAAATCCTCGC 60.125 61.111 0.00 0.00 43.73 5.03
6634 6853 2.464459 GCAGGCGGACAAATCCTCG 61.464 63.158 0.00 0.00 43.73 4.63
6635 6854 0.678048 AAGCAGGCGGACAAATCCTC 60.678 55.000 0.00 0.00 43.73 3.71
6636 6855 0.678048 GAAGCAGGCGGACAAATCCT 60.678 55.000 0.00 0.00 43.73 3.24
6637 6856 1.803289 GAAGCAGGCGGACAAATCC 59.197 57.895 0.00 0.00 42.28 3.01
6638 6857 1.425428 CGAAGCAGGCGGACAAATC 59.575 57.895 0.00 0.00 0.00 2.17
6639 6858 3.578456 CGAAGCAGGCGGACAAAT 58.422 55.556 0.00 0.00 0.00 2.32
6687 6906 4.619227 AACGCACCACCACCCGAG 62.619 66.667 0.00 0.00 0.00 4.63
6688 6907 4.920112 CAACGCACCACCACCCGA 62.920 66.667 0.00 0.00 0.00 5.14
6689 6908 4.920112 TCAACGCACCACCACCCG 62.920 66.667 0.00 0.00 0.00 5.28
6690 6909 2.282180 ATCAACGCACCACCACCC 60.282 61.111 0.00 0.00 0.00 4.61
6691 6910 1.852067 GACATCAACGCACCACCACC 61.852 60.000 0.00 0.00 0.00 4.61
6692 6911 0.884704 AGACATCAACGCACCACCAC 60.885 55.000 0.00 0.00 0.00 4.16
6693 6912 0.179032 AAGACATCAACGCACCACCA 60.179 50.000 0.00 0.00 0.00 4.17
6694 6913 0.517316 GAAGACATCAACGCACCACC 59.483 55.000 0.00 0.00 0.00 4.61
6695 6914 1.195448 CTGAAGACATCAACGCACCAC 59.805 52.381 0.00 0.00 37.67 4.16
6696 6915 1.511850 CTGAAGACATCAACGCACCA 58.488 50.000 0.00 0.00 37.67 4.17
6697 6916 0.798776 CCTGAAGACATCAACGCACC 59.201 55.000 0.00 0.00 37.67 5.01
6698 6917 1.195448 CACCTGAAGACATCAACGCAC 59.805 52.381 0.00 0.00 37.67 5.34
6699 6918 1.511850 CACCTGAAGACATCAACGCA 58.488 50.000 0.00 0.00 37.67 5.24
6700 6919 0.798776 CCACCTGAAGACATCAACGC 59.201 55.000 0.00 0.00 37.67 4.84
6701 6920 0.798776 GCCACCTGAAGACATCAACG 59.201 55.000 0.00 0.00 37.67 4.10
6702 6921 0.798776 CGCCACCTGAAGACATCAAC 59.201 55.000 0.00 0.00 37.67 3.18
6703 6922 0.321564 CCGCCACCTGAAGACATCAA 60.322 55.000 0.00 0.00 37.67 2.57
6704 6923 1.296392 CCGCCACCTGAAGACATCA 59.704 57.895 0.00 0.00 36.38 3.07
6705 6924 0.741221 GACCGCCACCTGAAGACATC 60.741 60.000 0.00 0.00 0.00 3.06
6706 6925 1.296715 GACCGCCACCTGAAGACAT 59.703 57.895 0.00 0.00 0.00 3.06
6707 6926 2.741092 GACCGCCACCTGAAGACA 59.259 61.111 0.00 0.00 0.00 3.41
6708 6927 2.432628 CGACCGCCACCTGAAGAC 60.433 66.667 0.00 0.00 0.00 3.01
6709 6928 2.915659 ACGACCGCCACCTGAAGA 60.916 61.111 0.00 0.00 0.00 2.87
6710 6929 2.432628 GACGACCGCCACCTGAAG 60.433 66.667 0.00 0.00 0.00 3.02
6711 6930 4.351938 CGACGACCGCCACCTGAA 62.352 66.667 0.00 0.00 0.00 3.02
6775 6994 4.704833 CCTCACAGCCACCACCCG 62.705 72.222 0.00 0.00 0.00 5.28
6778 6997 4.626081 ACGCCTCACAGCCACCAC 62.626 66.667 0.00 0.00 0.00 4.16
6779 6998 4.624364 CACGCCTCACAGCCACCA 62.624 66.667 0.00 0.00 0.00 4.17
6781 7000 4.626081 ACCACGCCTCACAGCCAC 62.626 66.667 0.00 0.00 0.00 5.01
6782 7001 4.624364 CACCACGCCTCACAGCCA 62.624 66.667 0.00 0.00 0.00 4.75
6816 7035 3.917760 GAGGCGTCAGATCCGGGG 61.918 72.222 0.00 0.00 0.00 5.73
6817 7036 3.917760 GGAGGCGTCAGATCCGGG 61.918 72.222 8.91 0.00 0.00 5.73
6831 7050 3.920093 GAACAGGTTGGGGGCGGAG 62.920 68.421 0.00 0.00 0.00 4.63
6832 7051 3.961414 GAACAGGTTGGGGGCGGA 61.961 66.667 0.00 0.00 0.00 5.54
6838 7057 3.966543 AGGGCCGAACAGGTTGGG 61.967 66.667 8.65 8.65 43.70 4.12
6839 7058 2.672996 CAGGGCCGAACAGGTTGG 60.673 66.667 0.00 0.00 43.70 3.77
6840 7059 1.966451 GACAGGGCCGAACAGGTTG 60.966 63.158 0.00 0.00 43.70 3.77
6841 7060 2.397413 CTGACAGGGCCGAACAGGTT 62.397 60.000 15.38 0.00 43.70 3.50
6842 7061 2.847234 TGACAGGGCCGAACAGGT 60.847 61.111 0.00 0.00 43.70 4.00
6843 7062 1.903877 ATCTGACAGGGCCGAACAGG 61.904 60.000 20.20 3.82 44.97 4.00
6844 7063 0.460987 GATCTGACAGGGCCGAACAG 60.461 60.000 16.50 16.50 0.00 3.16
6845 7064 0.904865 AGATCTGACAGGGCCGAACA 60.905 55.000 1.81 0.00 0.00 3.18
6846 7065 1.067821 CTAGATCTGACAGGGCCGAAC 59.932 57.143 5.18 0.00 0.00 3.95
6847 7066 1.342076 ACTAGATCTGACAGGGCCGAA 60.342 52.381 5.18 0.00 0.00 4.30
6848 7067 0.259065 ACTAGATCTGACAGGGCCGA 59.741 55.000 5.18 0.00 0.00 5.54
6849 7068 1.115467 AACTAGATCTGACAGGGCCG 58.885 55.000 5.18 0.00 0.00 6.13
6850 7069 2.158885 GGAAACTAGATCTGACAGGGCC 60.159 54.545 5.18 0.00 0.00 5.80
6851 7070 2.482142 CGGAAACTAGATCTGACAGGGC 60.482 54.545 5.18 0.00 0.00 5.19
6852 7071 2.101582 CCGGAAACTAGATCTGACAGGG 59.898 54.545 5.18 0.00 0.00 4.45
6853 7072 2.482142 GCCGGAAACTAGATCTGACAGG 60.482 54.545 5.05 3.79 0.00 4.00
6854 7073 2.428890 AGCCGGAAACTAGATCTGACAG 59.571 50.000 5.05 0.00 0.00 3.51
6855 7074 2.166459 CAGCCGGAAACTAGATCTGACA 59.834 50.000 5.05 0.00 0.00 3.58
6856 7075 2.482142 CCAGCCGGAAACTAGATCTGAC 60.482 54.545 5.05 0.00 0.00 3.51
6857 7076 1.757118 CCAGCCGGAAACTAGATCTGA 59.243 52.381 5.05 0.00 0.00 3.27
6858 7077 1.808133 GCCAGCCGGAAACTAGATCTG 60.808 57.143 5.05 0.00 0.00 2.90
6859 7078 0.466124 GCCAGCCGGAAACTAGATCT 59.534 55.000 5.05 0.00 0.00 2.75
6860 7079 0.533085 GGCCAGCCGGAAACTAGATC 60.533 60.000 5.05 0.00 0.00 2.75
6861 7080 0.983378 AGGCCAGCCGGAAACTAGAT 60.983 55.000 5.05 0.00 41.95 1.98
6862 7081 0.324923 TAGGCCAGCCGGAAACTAGA 60.325 55.000 5.05 0.00 41.95 2.43
6863 7082 0.105039 CTAGGCCAGCCGGAAACTAG 59.895 60.000 5.05 5.16 41.95 2.57
6864 7083 1.335132 CCTAGGCCAGCCGGAAACTA 61.335 60.000 5.05 0.00 41.95 2.24
6865 7084 2.670148 CCTAGGCCAGCCGGAAACT 61.670 63.158 5.05 0.00 41.95 2.66
6866 7085 2.124695 CCTAGGCCAGCCGGAAAC 60.125 66.667 5.05 0.00 41.95 2.78
6867 7086 2.609610 ACCTAGGCCAGCCGGAAA 60.610 61.111 9.30 0.00 41.95 3.13
6868 7087 3.081409 GACCTAGGCCAGCCGGAA 61.081 66.667 9.30 0.00 41.95 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.