Multiple sequence alignment - TraesCS3A01G107900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G107900 chr3A 100.000 4985 0 0 1 4985 72700594 72695610 0.000000e+00 9206.0
1 TraesCS3A01G107900 chr3A 93.169 527 23 3 4472 4985 705923186 705923712 0.000000e+00 761.0
2 TraesCS3A01G107900 chr3B 92.909 3878 168 50 621 4442 103035998 103032172 0.000000e+00 5539.0
3 TraesCS3A01G107900 chr3B 77.174 460 93 12 38 491 12546199 12545746 1.780000e-64 257.0
4 TraesCS3A01G107900 chr3B 90.769 195 13 3 1939 2131 103034401 103034210 6.400000e-64 255.0
5 TraesCS3A01G107900 chr3B 84.158 202 21 5 4615 4805 582001895 582002096 8.520000e-43 185.0
6 TraesCS3A01G107900 chr3B 84.694 98 15 0 4490 4587 104419250 104419153 1.140000e-16 99.0
7 TraesCS3A01G107900 chr3D 93.349 3789 158 30 619 4379 63414524 63410802 0.000000e+00 5515.0
8 TraesCS3A01G107900 chr3D 88.718 195 16 4 1939 2131 63412948 63412758 3.000000e-57 233.0
9 TraesCS3A01G107900 chr3D 87.129 202 15 5 2224 2418 63413241 63413044 8.400000e-53 219.0
10 TraesCS3A01G107900 chr3D 94.340 53 0 1 4374 4426 63410785 63410736 1.490000e-10 78.7
11 TraesCS3A01G107900 chr1D 96.176 523 14 3 4469 4985 481038083 481038605 0.000000e+00 850.0
12 TraesCS3A01G107900 chr4B 84.896 384 35 9 4615 4978 559846840 559847220 2.840000e-97 366.0
13 TraesCS3A01G107900 chr4B 71.548 478 112 23 76 541 567171566 567171101 1.900000e-19 108.0
14 TraesCS3A01G107900 chr4B 92.857 42 2 1 4480 4520 378033120 378033079 5.390000e-05 60.2
15 TraesCS3A01G107900 chr6D 87.307 323 33 5 4663 4978 75896975 75896654 3.670000e-96 363.0
16 TraesCS3A01G107900 chr7B 84.302 344 51 3 38 380 565202356 565202015 2.880000e-87 333.0
17 TraesCS3A01G107900 chr7B 80.965 373 65 5 52 421 141825581 141825950 1.760000e-74 291.0
18 TraesCS3A01G107900 chr7D 79.093 397 73 7 39 433 175946177 175946565 1.060000e-66 265.0
19 TraesCS3A01G107900 chr7D 92.105 38 3 0 4449 4486 565530213 565530250 3.000000e-03 54.7
20 TraesCS3A01G107900 chr5B 85.470 234 33 1 48 281 655727944 655728176 4.990000e-60 243.0
21 TraesCS3A01G107900 chr5B 94.340 53 2 1 38 90 45019897 45019846 4.140000e-11 80.5
22 TraesCS3A01G107900 chr5B 95.455 44 2 0 2988 3031 429901633 429901676 2.490000e-08 71.3
23 TraesCS3A01G107900 chr2D 87.895 190 17 3 4615 4798 175291202 175291013 8.400000e-53 219.0
24 TraesCS3A01G107900 chr2B 86.224 196 16 5 4621 4805 44922142 44921947 8.460000e-48 202.0
25 TraesCS3A01G107900 chr6B 92.308 39 3 0 4448 4486 24729549 24729511 6.970000e-04 56.5
26 TraesCS3A01G107900 chr6B 92.105 38 3 0 4449 4486 625284496 625284533 3.000000e-03 54.7
27 TraesCS3A01G107900 chrUn 92.105 38 3 0 4449 4486 69458517 69458480 3.000000e-03 54.7
28 TraesCS3A01G107900 chrUn 92.105 38 3 0 4449 4486 274279078 274279115 3.000000e-03 54.7
29 TraesCS3A01G107900 chr5D 90.244 41 4 0 4446 4486 40890196 40890236 3.000000e-03 54.7
30 TraesCS3A01G107900 chr5A 100.000 28 0 0 4459 4486 362398385 362398412 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G107900 chr3A 72695610 72700594 4984 True 9206.000 9206 100.000 1 4985 1 chr3A.!!$R1 4984
1 TraesCS3A01G107900 chr3A 705923186 705923712 526 False 761.000 761 93.169 4472 4985 1 chr3A.!!$F1 513
2 TraesCS3A01G107900 chr3B 103032172 103035998 3826 True 2897.000 5539 91.839 621 4442 2 chr3B.!!$R3 3821
3 TraesCS3A01G107900 chr3D 63410736 63414524 3788 True 1511.425 5515 90.884 619 4426 4 chr3D.!!$R1 3807
4 TraesCS3A01G107900 chr1D 481038083 481038605 522 False 850.000 850 96.176 4469 4985 1 chr1D.!!$F1 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
410 411 0.033796 CAGCTCAACCACCCCATCAT 60.034 55.0 0.0 0.0 0.0 2.45 F
414 415 0.035534 TCAACCACCCCATCATCGTG 60.036 55.0 0.0 0.0 0.0 4.35 F
547 548 0.035725 CCTTAACCCAACCGTCCTCC 60.036 60.0 0.0 0.0 0.0 4.30 F
561 562 0.183971 TCCTCCGGCTTTTTCCAACA 59.816 50.0 0.0 0.0 0.0 3.33 F
562 563 0.598065 CCTCCGGCTTTTTCCAACAG 59.402 55.0 0.0 0.0 0.0 3.16 F
934 935 0.611896 CCCAATTCCAAACTCCGCCT 60.612 55.0 0.0 0.0 0.0 5.52 F
935 936 0.811281 CCAATTCCAAACTCCGCCTC 59.189 55.0 0.0 0.0 0.0 4.70 F
1283 1285 0.842905 TGGGCTGCTGGTTAGGGTTA 60.843 55.0 0.0 0.0 0.0 2.85 F
3049 3067 0.736325 GAAGGACGATGTGTGGGACG 60.736 60.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1296 1298 0.521735 GACCATTTCAACGCCTGGAC 59.478 55.000 0.00 0.0 32.92 4.02 R
1588 1597 0.536724 TGAGAATGCTGCGAAGGCTA 59.463 50.000 0.00 0.0 40.82 3.93 R
2425 2442 1.066858 CGTAACTGATGCTCCACCTGT 60.067 52.381 0.00 0.0 0.00 4.00 R
2557 2574 1.625818 AGACGAGGGTGAAATGAAGCT 59.374 47.619 0.00 0.0 0.00 3.74 R
2597 2615 2.542205 GGTAAACACGGGTCTGCAAAAC 60.542 50.000 0.00 0.0 0.00 2.43 R
2898 2916 4.773323 ACAATTGAAGCAAAGTAGAGCC 57.227 40.909 13.59 0.0 0.00 4.70 R
2932 2950 6.791867 ATGTAAACACCAGAGAGCATACTA 57.208 37.500 0.00 0.0 0.00 1.82 R
3165 3183 1.197721 CTCCACTGGACAAATCGCAAC 59.802 52.381 0.00 0.0 0.00 4.17 R
4442 4520 0.751452 CCCCCGCCTCTAGTAAAGAC 59.249 60.000 0.00 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.398920 GTCATCCACATGGCGACG 58.601 61.111 0.00 0.00 34.44 5.12
18 19 2.511373 TCATCCACATGGCGACGC 60.511 61.111 12.43 12.43 34.44 5.19
19 20 2.512286 CATCCACATGGCGACGCT 60.512 61.111 20.77 0.00 34.44 5.07
20 21 2.108514 CATCCACATGGCGACGCTT 61.109 57.895 20.77 4.81 34.44 4.68
21 22 0.809636 CATCCACATGGCGACGCTTA 60.810 55.000 20.77 9.80 34.44 3.09
22 23 0.530650 ATCCACATGGCGACGCTTAG 60.531 55.000 20.77 11.68 34.44 2.18
23 24 1.153647 CCACATGGCGACGCTTAGA 60.154 57.895 20.77 1.75 0.00 2.10
24 25 1.421410 CCACATGGCGACGCTTAGAC 61.421 60.000 20.77 2.65 0.00 2.59
25 26 0.735978 CACATGGCGACGCTTAGACA 60.736 55.000 20.77 9.06 0.00 3.41
26 27 0.458543 ACATGGCGACGCTTAGACAG 60.459 55.000 20.77 5.70 0.00 3.51
27 28 1.141881 ATGGCGACGCTTAGACAGG 59.858 57.895 20.77 0.00 0.00 4.00
28 29 1.605058 ATGGCGACGCTTAGACAGGT 61.605 55.000 20.77 0.00 0.00 4.00
29 30 1.080025 GGCGACGCTTAGACAGGTT 60.080 57.895 20.77 0.00 0.00 3.50
30 31 0.171903 GGCGACGCTTAGACAGGTTA 59.828 55.000 20.77 0.00 0.00 2.85
31 32 1.202382 GGCGACGCTTAGACAGGTTAT 60.202 52.381 20.77 0.00 0.00 1.89
32 33 2.117910 GCGACGCTTAGACAGGTTATC 58.882 52.381 13.73 0.00 0.00 1.75
33 34 2.223525 GCGACGCTTAGACAGGTTATCT 60.224 50.000 13.73 0.00 0.00 1.98
34 35 3.619729 CGACGCTTAGACAGGTTATCTC 58.380 50.000 0.00 0.00 0.00 2.75
35 36 3.619729 GACGCTTAGACAGGTTATCTCG 58.380 50.000 0.00 0.00 0.00 4.04
36 37 3.276857 ACGCTTAGACAGGTTATCTCGA 58.723 45.455 0.00 0.00 0.00 4.04
37 38 3.312973 ACGCTTAGACAGGTTATCTCGAG 59.687 47.826 5.93 5.93 0.00 4.04
38 39 3.312973 CGCTTAGACAGGTTATCTCGAGT 59.687 47.826 13.13 2.46 0.00 4.18
39 40 4.201930 CGCTTAGACAGGTTATCTCGAGTT 60.202 45.833 13.13 6.80 0.00 3.01
40 41 5.652518 GCTTAGACAGGTTATCTCGAGTTT 58.347 41.667 13.13 4.09 0.00 2.66
41 42 6.100668 GCTTAGACAGGTTATCTCGAGTTTT 58.899 40.000 13.13 1.46 0.00 2.43
42 43 6.590677 GCTTAGACAGGTTATCTCGAGTTTTT 59.409 38.462 13.13 0.00 0.00 1.94
63 64 6.904463 TTTTTAGGGGGAAATAGTTGTCAC 57.096 37.500 0.00 0.00 0.00 3.67
64 65 5.853572 TTTAGGGGGAAATAGTTGTCACT 57.146 39.130 0.00 0.00 36.99 3.41
65 66 5.853572 TTAGGGGGAAATAGTTGTCACTT 57.146 39.130 0.00 0.00 34.06 3.16
66 67 4.741928 AGGGGGAAATAGTTGTCACTTT 57.258 40.909 0.00 0.00 34.06 2.66
67 68 5.853572 AGGGGGAAATAGTTGTCACTTTA 57.146 39.130 0.00 0.00 34.06 1.85
68 69 6.402981 AGGGGGAAATAGTTGTCACTTTAT 57.597 37.500 0.00 0.00 34.06 1.40
69 70 6.800890 AGGGGGAAATAGTTGTCACTTTATT 58.199 36.000 0.00 0.00 34.06 1.40
70 71 6.890268 AGGGGGAAATAGTTGTCACTTTATTC 59.110 38.462 0.00 0.00 34.06 1.75
71 72 6.661805 GGGGGAAATAGTTGTCACTTTATTCA 59.338 38.462 0.00 0.00 34.06 2.57
72 73 7.177744 GGGGGAAATAGTTGTCACTTTATTCAA 59.822 37.037 0.00 0.00 34.06 2.69
73 74 8.749354 GGGGAAATAGTTGTCACTTTATTCAAT 58.251 33.333 0.00 0.00 34.06 2.57
74 75 9.573133 GGGAAATAGTTGTCACTTTATTCAATG 57.427 33.333 0.00 0.00 34.06 2.82
82 83 9.065871 GTTGTCACTTTATTCAATGTTCATAGC 57.934 33.333 0.00 0.00 0.00 2.97
83 84 8.565896 TGTCACTTTATTCAATGTTCATAGCT 57.434 30.769 0.00 0.00 0.00 3.32
84 85 8.668353 TGTCACTTTATTCAATGTTCATAGCTC 58.332 33.333 0.00 0.00 0.00 4.09
85 86 8.125448 GTCACTTTATTCAATGTTCATAGCTCC 58.875 37.037 0.00 0.00 0.00 4.70
86 87 8.049117 TCACTTTATTCAATGTTCATAGCTCCT 58.951 33.333 0.00 0.00 0.00 3.69
87 88 8.680903 CACTTTATTCAATGTTCATAGCTCCTT 58.319 33.333 0.00 0.00 0.00 3.36
88 89 8.897752 ACTTTATTCAATGTTCATAGCTCCTTC 58.102 33.333 0.00 0.00 0.00 3.46
89 90 9.118300 CTTTATTCAATGTTCATAGCTCCTTCT 57.882 33.333 0.00 0.00 0.00 2.85
90 91 9.466497 TTTATTCAATGTTCATAGCTCCTTCTT 57.534 29.630 0.00 0.00 0.00 2.52
91 92 6.748333 TTCAATGTTCATAGCTCCTTCTTG 57.252 37.500 0.00 0.00 0.00 3.02
92 93 5.809001 TCAATGTTCATAGCTCCTTCTTGT 58.191 37.500 0.00 0.00 0.00 3.16
93 94 5.645067 TCAATGTTCATAGCTCCTTCTTGTG 59.355 40.000 0.00 0.00 0.00 3.33
94 95 3.338249 TGTTCATAGCTCCTTCTTGTGC 58.662 45.455 0.00 0.00 0.00 4.57
95 96 3.244526 TGTTCATAGCTCCTTCTTGTGCA 60.245 43.478 0.00 0.00 0.00 4.57
96 97 3.701205 TCATAGCTCCTTCTTGTGCAA 57.299 42.857 0.00 0.00 0.00 4.08
97 98 3.338249 TCATAGCTCCTTCTTGTGCAAC 58.662 45.455 0.00 0.00 37.35 4.17
98 99 2.185004 TAGCTCCTTCTTGTGCAACC 57.815 50.000 0.00 0.00 34.36 3.77
99 100 0.475906 AGCTCCTTCTTGTGCAACCT 59.524 50.000 0.00 0.00 34.36 3.50
100 101 0.877743 GCTCCTTCTTGTGCAACCTC 59.122 55.000 0.00 0.00 34.36 3.85
101 102 1.528129 CTCCTTCTTGTGCAACCTCC 58.472 55.000 0.00 0.00 34.36 4.30
102 103 0.250295 TCCTTCTTGTGCAACCTCCG 60.250 55.000 0.00 0.00 34.36 4.63
103 104 0.250295 CCTTCTTGTGCAACCTCCGA 60.250 55.000 0.00 0.00 34.36 4.55
104 105 1.151668 CTTCTTGTGCAACCTCCGAG 58.848 55.000 0.00 0.00 34.36 4.63
105 106 0.884704 TTCTTGTGCAACCTCCGAGC 60.885 55.000 0.00 0.00 34.36 5.03
106 107 1.302033 CTTGTGCAACCTCCGAGCT 60.302 57.895 0.00 0.00 34.36 4.09
107 108 0.037326 CTTGTGCAACCTCCGAGCTA 60.037 55.000 0.00 0.00 34.36 3.32
108 109 0.394938 TTGTGCAACCTCCGAGCTAA 59.605 50.000 0.00 0.00 34.36 3.09
109 110 0.320421 TGTGCAACCTCCGAGCTAAC 60.320 55.000 0.00 0.00 34.36 2.34
110 111 1.019805 GTGCAACCTCCGAGCTAACC 61.020 60.000 0.00 0.00 0.00 2.85
111 112 1.449778 GCAACCTCCGAGCTAACCC 60.450 63.158 0.00 0.00 0.00 4.11
112 113 1.980052 CAACCTCCGAGCTAACCCA 59.020 57.895 0.00 0.00 0.00 4.51
113 114 0.391263 CAACCTCCGAGCTAACCCAC 60.391 60.000 0.00 0.00 0.00 4.61
114 115 0.544595 AACCTCCGAGCTAACCCACT 60.545 55.000 0.00 0.00 0.00 4.00
115 116 0.971447 ACCTCCGAGCTAACCCACTC 60.971 60.000 0.00 0.00 0.00 3.51
141 142 2.946564 GCACATGGAGCCAAGTTTTAC 58.053 47.619 0.00 0.00 0.00 2.01
142 143 2.295909 GCACATGGAGCCAAGTTTTACA 59.704 45.455 0.00 0.00 0.00 2.41
143 144 3.243704 GCACATGGAGCCAAGTTTTACAA 60.244 43.478 0.00 0.00 0.00 2.41
144 145 4.739137 GCACATGGAGCCAAGTTTTACAAA 60.739 41.667 0.00 0.00 0.00 2.83
145 146 4.984161 CACATGGAGCCAAGTTTTACAAAG 59.016 41.667 0.00 0.00 0.00 2.77
146 147 3.726291 TGGAGCCAAGTTTTACAAAGC 57.274 42.857 0.00 0.00 0.00 3.51
147 148 2.034053 TGGAGCCAAGTTTTACAAAGCG 59.966 45.455 0.00 0.00 0.00 4.68
148 149 2.292292 GGAGCCAAGTTTTACAAAGCGA 59.708 45.455 0.00 0.00 0.00 4.93
149 150 3.057526 GGAGCCAAGTTTTACAAAGCGAT 60.058 43.478 0.00 0.00 0.00 4.58
150 151 4.159120 GAGCCAAGTTTTACAAAGCGATC 58.841 43.478 0.00 0.00 0.00 3.69
151 152 3.821033 AGCCAAGTTTTACAAAGCGATCT 59.179 39.130 0.00 0.00 0.00 2.75
152 153 5.001232 AGCCAAGTTTTACAAAGCGATCTA 58.999 37.500 0.00 0.00 0.00 1.98
153 154 5.472137 AGCCAAGTTTTACAAAGCGATCTAA 59.528 36.000 0.00 0.00 0.00 2.10
154 155 6.151144 AGCCAAGTTTTACAAAGCGATCTAAT 59.849 34.615 0.00 0.00 0.00 1.73
155 156 7.335924 AGCCAAGTTTTACAAAGCGATCTAATA 59.664 33.333 0.00 0.00 0.00 0.98
156 157 7.428472 GCCAAGTTTTACAAAGCGATCTAATAC 59.572 37.037 0.00 0.00 0.00 1.89
157 158 8.447833 CCAAGTTTTACAAAGCGATCTAATACA 58.552 33.333 0.00 0.00 0.00 2.29
158 159 9.820229 CAAGTTTTACAAAGCGATCTAATACAA 57.180 29.630 0.00 0.00 0.00 2.41
164 165 7.484035 ACAAAGCGATCTAATACAATCTTCC 57.516 36.000 0.00 0.00 0.00 3.46
165 166 6.483640 ACAAAGCGATCTAATACAATCTTCCC 59.516 38.462 0.00 0.00 0.00 3.97
166 167 6.426646 AAGCGATCTAATACAATCTTCCCT 57.573 37.500 0.00 0.00 0.00 4.20
167 168 7.540474 AAGCGATCTAATACAATCTTCCCTA 57.460 36.000 0.00 0.00 0.00 3.53
168 169 7.540474 AGCGATCTAATACAATCTTCCCTAA 57.460 36.000 0.00 0.00 0.00 2.69
169 170 7.379750 AGCGATCTAATACAATCTTCCCTAAC 58.620 38.462 0.00 0.00 0.00 2.34
170 171 7.233757 AGCGATCTAATACAATCTTCCCTAACT 59.766 37.037 0.00 0.00 0.00 2.24
171 172 8.521176 GCGATCTAATACAATCTTCCCTAACTA 58.479 37.037 0.00 0.00 0.00 2.24
175 176 9.364653 TCTAATACAATCTTCCCTAACTAGGAC 57.635 37.037 4.23 0.00 46.63 3.85
176 177 7.989947 AATACAATCTTCCCTAACTAGGACA 57.010 36.000 4.23 0.00 46.63 4.02
177 178 8.568617 AATACAATCTTCCCTAACTAGGACAT 57.431 34.615 4.23 0.00 46.63 3.06
178 179 6.240549 ACAATCTTCCCTAACTAGGACATG 57.759 41.667 4.23 0.00 46.63 3.21
179 180 5.726793 ACAATCTTCCCTAACTAGGACATGT 59.273 40.000 0.00 0.00 46.63 3.21
180 181 5.878406 ATCTTCCCTAACTAGGACATGTG 57.122 43.478 1.15 0.00 46.63 3.21
181 182 3.451178 TCTTCCCTAACTAGGACATGTGC 59.549 47.826 9.70 9.70 46.63 4.57
182 183 1.754803 TCCCTAACTAGGACATGTGCG 59.245 52.381 12.02 1.04 46.63 5.34
183 184 1.754803 CCCTAACTAGGACATGTGCGA 59.245 52.381 12.02 5.80 46.63 5.10
184 185 2.481449 CCCTAACTAGGACATGTGCGAC 60.481 54.545 12.02 0.00 46.63 5.19
185 186 2.427453 CCTAACTAGGACATGTGCGACT 59.573 50.000 12.02 3.21 46.63 4.18
186 187 3.119101 CCTAACTAGGACATGTGCGACTT 60.119 47.826 12.02 6.68 46.63 3.01
187 188 3.402628 AACTAGGACATGTGCGACTTT 57.597 42.857 12.02 1.55 0.00 2.66
188 189 4.530710 AACTAGGACATGTGCGACTTTA 57.469 40.909 12.02 0.00 0.00 1.85
189 190 4.737855 ACTAGGACATGTGCGACTTTAT 57.262 40.909 12.02 0.00 0.00 1.40
190 191 5.086104 ACTAGGACATGTGCGACTTTATT 57.914 39.130 12.02 0.00 0.00 1.40
191 192 5.488341 ACTAGGACATGTGCGACTTTATTT 58.512 37.500 12.02 0.00 0.00 1.40
192 193 4.685169 AGGACATGTGCGACTTTATTTG 57.315 40.909 12.02 0.00 0.00 2.32
193 194 3.119849 AGGACATGTGCGACTTTATTTGC 60.120 43.478 12.02 0.00 0.00 3.68
194 195 3.171277 GACATGTGCGACTTTATTTGCC 58.829 45.455 1.15 0.00 0.00 4.52
195 196 2.176369 CATGTGCGACTTTATTTGCCG 58.824 47.619 0.00 0.00 0.00 5.69
196 197 1.514003 TGTGCGACTTTATTTGCCGA 58.486 45.000 0.00 0.00 0.00 5.54
197 198 2.080693 TGTGCGACTTTATTTGCCGAT 58.919 42.857 0.00 0.00 0.00 4.18
198 199 2.095213 TGTGCGACTTTATTTGCCGATC 59.905 45.455 0.00 0.00 0.00 3.69
199 200 1.326245 TGCGACTTTATTTGCCGATCG 59.674 47.619 8.51 8.51 0.00 3.69
200 201 1.326548 GCGACTTTATTTGCCGATCGT 59.673 47.619 15.09 0.00 0.00 3.73
201 202 2.596807 GCGACTTTATTTGCCGATCGTC 60.597 50.000 15.09 0.47 0.00 4.20
202 203 2.346376 CGACTTTATTTGCCGATCGTCG 60.346 50.000 15.09 8.60 40.07 5.12
203 204 1.326548 ACTTTATTTGCCGATCGTCGC 59.673 47.619 15.09 11.82 38.82 5.19
204 205 1.326245 CTTTATTTGCCGATCGTCGCA 59.674 47.619 15.09 14.47 38.82 5.10
205 206 0.648441 TTATTTGCCGATCGTCGCAC 59.352 50.000 17.01 1.14 38.82 5.34
206 207 1.149361 TATTTGCCGATCGTCGCACC 61.149 55.000 17.01 0.00 38.82 5.01
210 211 2.885644 CCGATCGTCGCACCCAAG 60.886 66.667 15.09 0.00 38.82 3.61
211 212 2.126071 CGATCGTCGCACCCAAGT 60.126 61.111 7.03 0.00 31.14 3.16
212 213 1.138036 CGATCGTCGCACCCAAGTA 59.862 57.895 7.03 0.00 31.14 2.24
213 214 0.457166 CGATCGTCGCACCCAAGTAA 60.457 55.000 7.03 0.00 31.14 2.24
214 215 0.997196 GATCGTCGCACCCAAGTAAC 59.003 55.000 0.00 0.00 0.00 2.50
215 216 0.606604 ATCGTCGCACCCAAGTAACT 59.393 50.000 0.00 0.00 0.00 2.24
216 217 0.038892 TCGTCGCACCCAAGTAACTC 60.039 55.000 0.00 0.00 0.00 3.01
217 218 0.038526 CGTCGCACCCAAGTAACTCT 60.039 55.000 0.00 0.00 0.00 3.24
218 219 1.200716 CGTCGCACCCAAGTAACTCTA 59.799 52.381 0.00 0.00 0.00 2.43
219 220 2.352030 CGTCGCACCCAAGTAACTCTAA 60.352 50.000 0.00 0.00 0.00 2.10
220 221 3.656559 GTCGCACCCAAGTAACTCTAAA 58.343 45.455 0.00 0.00 0.00 1.85
221 222 3.431233 GTCGCACCCAAGTAACTCTAAAC 59.569 47.826 0.00 0.00 0.00 2.01
222 223 3.322828 TCGCACCCAAGTAACTCTAAACT 59.677 43.478 0.00 0.00 0.00 2.66
223 224 3.678548 CGCACCCAAGTAACTCTAAACTC 59.321 47.826 0.00 0.00 0.00 3.01
224 225 4.001652 GCACCCAAGTAACTCTAAACTCC 58.998 47.826 0.00 0.00 0.00 3.85
225 226 4.262938 GCACCCAAGTAACTCTAAACTCCT 60.263 45.833 0.00 0.00 0.00 3.69
226 227 5.238583 CACCCAAGTAACTCTAAACTCCTG 58.761 45.833 0.00 0.00 0.00 3.86
227 228 5.011738 CACCCAAGTAACTCTAAACTCCTGA 59.988 44.000 0.00 0.00 0.00 3.86
228 229 5.605488 ACCCAAGTAACTCTAAACTCCTGAA 59.395 40.000 0.00 0.00 0.00 3.02
229 230 6.100714 ACCCAAGTAACTCTAAACTCCTGAAA 59.899 38.462 0.00 0.00 0.00 2.69
230 231 6.996282 CCCAAGTAACTCTAAACTCCTGAAAA 59.004 38.462 0.00 0.00 0.00 2.29
231 232 7.173390 CCCAAGTAACTCTAAACTCCTGAAAAG 59.827 40.741 0.00 0.00 0.00 2.27
232 233 7.931948 CCAAGTAACTCTAAACTCCTGAAAAGA 59.068 37.037 0.00 0.00 0.00 2.52
233 234 9.326413 CAAGTAACTCTAAACTCCTGAAAAGAA 57.674 33.333 0.00 0.00 0.00 2.52
234 235 8.890124 AGTAACTCTAAACTCCTGAAAAGAAC 57.110 34.615 0.00 0.00 0.00 3.01
235 236 8.706521 AGTAACTCTAAACTCCTGAAAAGAACT 58.293 33.333 0.00 0.00 0.00 3.01
236 237 8.980610 GTAACTCTAAACTCCTGAAAAGAACTC 58.019 37.037 0.00 0.00 0.00 3.01
237 238 7.125792 ACTCTAAACTCCTGAAAAGAACTCA 57.874 36.000 0.00 0.00 0.00 3.41
238 239 7.565680 ACTCTAAACTCCTGAAAAGAACTCAA 58.434 34.615 0.00 0.00 0.00 3.02
239 240 8.214364 ACTCTAAACTCCTGAAAAGAACTCAAT 58.786 33.333 0.00 0.00 0.00 2.57
240 241 9.712305 CTCTAAACTCCTGAAAAGAACTCAATA 57.288 33.333 0.00 0.00 0.00 1.90
244 245 7.511959 ACTCCTGAAAAGAACTCAATAAACC 57.488 36.000 0.00 0.00 0.00 3.27
245 246 7.290813 ACTCCTGAAAAGAACTCAATAAACCT 58.709 34.615 0.00 0.00 0.00 3.50
246 247 7.780271 ACTCCTGAAAAGAACTCAATAAACCTT 59.220 33.333 0.00 0.00 0.00 3.50
247 248 8.533569 TCCTGAAAAGAACTCAATAAACCTTT 57.466 30.769 0.00 0.00 0.00 3.11
248 249 8.977412 TCCTGAAAAGAACTCAATAAACCTTTT 58.023 29.630 0.00 0.00 36.79 2.27
266 267 7.215719 ACCTTTTATTTCCTCAACTAGTTGC 57.784 36.000 27.49 0.00 40.24 4.17
267 268 6.208797 ACCTTTTATTTCCTCAACTAGTTGCC 59.791 38.462 27.49 0.00 40.24 4.52
268 269 6.350194 CCTTTTATTTCCTCAACTAGTTGCCC 60.350 42.308 27.49 0.00 40.24 5.36
269 270 3.806949 ATTTCCTCAACTAGTTGCCCA 57.193 42.857 27.49 12.24 40.24 5.36
270 271 3.806949 TTTCCTCAACTAGTTGCCCAT 57.193 42.857 27.49 0.00 40.24 4.00
271 272 3.806949 TTCCTCAACTAGTTGCCCATT 57.193 42.857 27.49 0.00 40.24 3.16
272 273 4.919774 TTCCTCAACTAGTTGCCCATTA 57.080 40.909 27.49 10.88 40.24 1.90
273 274 4.487714 TCCTCAACTAGTTGCCCATTAG 57.512 45.455 27.49 18.58 40.24 1.73
274 275 3.844211 TCCTCAACTAGTTGCCCATTAGT 59.156 43.478 27.49 0.00 40.24 2.24
275 276 4.288626 TCCTCAACTAGTTGCCCATTAGTT 59.711 41.667 27.49 0.00 40.24 2.24
279 280 5.499004 AACTAGTTGCCCATTAGTTGAGA 57.501 39.130 7.48 0.00 36.54 3.27
280 281 5.499004 ACTAGTTGCCCATTAGTTGAGAA 57.501 39.130 0.00 0.00 0.00 2.87
281 282 5.876357 ACTAGTTGCCCATTAGTTGAGAAA 58.124 37.500 0.00 0.00 0.00 2.52
282 283 6.485171 ACTAGTTGCCCATTAGTTGAGAAAT 58.515 36.000 0.00 0.00 0.00 2.17
283 284 5.904362 AGTTGCCCATTAGTTGAGAAATC 57.096 39.130 0.00 0.00 0.00 2.17
284 285 4.706962 AGTTGCCCATTAGTTGAGAAATCC 59.293 41.667 0.00 0.00 0.00 3.01
285 286 3.631250 TGCCCATTAGTTGAGAAATCCC 58.369 45.455 0.00 0.00 0.00 3.85
286 287 3.269381 TGCCCATTAGTTGAGAAATCCCT 59.731 43.478 0.00 0.00 0.00 4.20
287 288 4.264352 TGCCCATTAGTTGAGAAATCCCTT 60.264 41.667 0.00 0.00 0.00 3.95
288 289 4.711846 GCCCATTAGTTGAGAAATCCCTTT 59.288 41.667 0.00 0.00 0.00 3.11
289 290 5.394553 GCCCATTAGTTGAGAAATCCCTTTG 60.395 44.000 0.00 0.00 0.00 2.77
290 291 5.394553 CCCATTAGTTGAGAAATCCCTTTGC 60.395 44.000 0.00 0.00 0.00 3.68
291 292 5.185635 CCATTAGTTGAGAAATCCCTTTGCA 59.814 40.000 0.00 0.00 0.00 4.08
292 293 5.705609 TTAGTTGAGAAATCCCTTTGCAC 57.294 39.130 0.00 0.00 0.00 4.57
293 294 3.565307 AGTTGAGAAATCCCTTTGCACA 58.435 40.909 0.00 0.00 0.00 4.57
294 295 4.154942 AGTTGAGAAATCCCTTTGCACAT 58.845 39.130 0.00 0.00 0.00 3.21
295 296 4.590222 AGTTGAGAAATCCCTTTGCACATT 59.410 37.500 0.00 0.00 0.00 2.71
296 297 4.789012 TGAGAAATCCCTTTGCACATTC 57.211 40.909 0.00 0.00 0.00 2.67
297 298 4.410099 TGAGAAATCCCTTTGCACATTCT 58.590 39.130 0.00 0.00 0.00 2.40
298 299 4.834496 TGAGAAATCCCTTTGCACATTCTT 59.166 37.500 0.00 0.00 0.00 2.52
299 300 5.143376 AGAAATCCCTTTGCACATTCTTG 57.857 39.130 0.00 0.00 0.00 3.02
300 301 4.834496 AGAAATCCCTTTGCACATTCTTGA 59.166 37.500 0.00 0.00 0.00 3.02
301 302 5.482878 AGAAATCCCTTTGCACATTCTTGAT 59.517 36.000 0.00 0.00 0.00 2.57
302 303 4.996788 ATCCCTTTGCACATTCTTGATC 57.003 40.909 0.00 0.00 0.00 2.92
303 304 4.038271 TCCCTTTGCACATTCTTGATCT 57.962 40.909 0.00 0.00 0.00 2.75
304 305 4.410099 TCCCTTTGCACATTCTTGATCTT 58.590 39.130 0.00 0.00 0.00 2.40
305 306 5.569355 TCCCTTTGCACATTCTTGATCTTA 58.431 37.500 0.00 0.00 0.00 2.10
306 307 5.415701 TCCCTTTGCACATTCTTGATCTTAC 59.584 40.000 0.00 0.00 0.00 2.34
307 308 5.393461 CCCTTTGCACATTCTTGATCTTACC 60.393 44.000 0.00 0.00 0.00 2.85
308 309 4.944962 TTGCACATTCTTGATCTTACCG 57.055 40.909 0.00 0.00 0.00 4.02
309 310 4.200838 TGCACATTCTTGATCTTACCGA 57.799 40.909 0.00 0.00 0.00 4.69
310 311 3.932710 TGCACATTCTTGATCTTACCGAC 59.067 43.478 0.00 0.00 0.00 4.79
311 312 3.932710 GCACATTCTTGATCTTACCGACA 59.067 43.478 0.00 0.00 0.00 4.35
312 313 4.033358 GCACATTCTTGATCTTACCGACAG 59.967 45.833 0.00 0.00 0.00 3.51
313 314 4.033358 CACATTCTTGATCTTACCGACAGC 59.967 45.833 0.00 0.00 0.00 4.40
314 315 4.081420 ACATTCTTGATCTTACCGACAGCT 60.081 41.667 0.00 0.00 0.00 4.24
315 316 3.784701 TCTTGATCTTACCGACAGCTC 57.215 47.619 0.00 0.00 0.00 4.09
316 317 2.427453 TCTTGATCTTACCGACAGCTCC 59.573 50.000 0.00 0.00 0.00 4.70
317 318 1.847328 TGATCTTACCGACAGCTCCA 58.153 50.000 0.00 0.00 0.00 3.86
318 319 2.388735 TGATCTTACCGACAGCTCCAT 58.611 47.619 0.00 0.00 0.00 3.41
319 320 2.101415 TGATCTTACCGACAGCTCCATG 59.899 50.000 0.00 0.00 0.00 3.66
320 321 1.847328 TCTTACCGACAGCTCCATGA 58.153 50.000 0.00 0.00 0.00 3.07
321 322 1.751351 TCTTACCGACAGCTCCATGAG 59.249 52.381 0.00 0.00 0.00 2.90
322 323 1.751351 CTTACCGACAGCTCCATGAGA 59.249 52.381 0.00 0.00 0.00 3.27
323 324 1.393603 TACCGACAGCTCCATGAGAG 58.606 55.000 0.00 0.06 46.29 3.20
324 325 0.613292 ACCGACAGCTCCATGAGAGT 60.613 55.000 11.37 3.05 45.21 3.24
325 326 0.102120 CCGACAGCTCCATGAGAGTC 59.898 60.000 11.37 9.19 45.21 3.36
326 327 0.102120 CGACAGCTCCATGAGAGTCC 59.898 60.000 11.37 0.00 45.21 3.85
327 328 0.102120 GACAGCTCCATGAGAGTCCG 59.898 60.000 11.37 4.89 45.21 4.79
328 329 0.323816 ACAGCTCCATGAGAGTCCGA 60.324 55.000 11.37 0.00 45.21 4.55
329 330 1.039068 CAGCTCCATGAGAGTCCGAT 58.961 55.000 11.37 0.00 45.21 4.18
330 331 1.411977 CAGCTCCATGAGAGTCCGATT 59.588 52.381 11.37 0.00 45.21 3.34
331 332 1.686052 AGCTCCATGAGAGTCCGATTC 59.314 52.381 11.37 0.00 45.21 2.52
332 333 1.410517 GCTCCATGAGAGTCCGATTCA 59.589 52.381 11.37 0.00 45.21 2.57
333 334 2.159043 GCTCCATGAGAGTCCGATTCAA 60.159 50.000 11.37 0.00 45.21 2.69
334 335 3.715495 CTCCATGAGAGTCCGATTCAAG 58.285 50.000 0.00 0.00 37.87 3.02
335 336 2.432146 TCCATGAGAGTCCGATTCAAGG 59.568 50.000 0.00 0.00 32.47 3.61
336 337 2.432146 CCATGAGAGTCCGATTCAAGGA 59.568 50.000 0.00 0.00 32.84 3.36
337 338 3.070734 CCATGAGAGTCCGATTCAAGGAT 59.929 47.826 0.00 0.00 40.30 3.24
338 339 4.305769 CATGAGAGTCCGATTCAAGGATC 58.694 47.826 0.00 0.00 40.30 3.36
339 340 3.365472 TGAGAGTCCGATTCAAGGATCA 58.635 45.455 0.00 0.00 40.30 2.92
340 341 3.131223 TGAGAGTCCGATTCAAGGATCAC 59.869 47.826 0.00 0.00 40.30 3.06
341 342 2.432510 AGAGTCCGATTCAAGGATCACC 59.567 50.000 0.00 0.00 40.30 4.02
354 355 4.437682 AGGATCACCTTGTGAACTTGAA 57.562 40.909 0.46 0.00 45.96 2.69
355 356 4.990526 AGGATCACCTTGTGAACTTGAAT 58.009 39.130 0.46 0.00 45.96 2.57
356 357 5.388654 AGGATCACCTTGTGAACTTGAATT 58.611 37.500 0.46 0.00 45.96 2.17
357 358 5.474876 AGGATCACCTTGTGAACTTGAATTC 59.525 40.000 0.46 0.00 45.96 2.17
358 359 5.474876 GGATCACCTTGTGAACTTGAATTCT 59.525 40.000 7.05 0.00 45.96 2.40
359 360 6.015940 GGATCACCTTGTGAACTTGAATTCTT 60.016 38.462 7.05 0.00 45.96 2.52
360 361 6.135290 TCACCTTGTGAACTTGAATTCTTG 57.865 37.500 7.05 2.06 39.78 3.02
361 362 5.885352 TCACCTTGTGAACTTGAATTCTTGA 59.115 36.000 7.05 0.00 39.78 3.02
362 363 6.038603 TCACCTTGTGAACTTGAATTCTTGAG 59.961 38.462 7.05 4.95 39.78 3.02
363 364 5.218139 CCTTGTGAACTTGAATTCTTGAGC 58.782 41.667 7.05 0.00 0.00 4.26
364 365 4.836125 TGTGAACTTGAATTCTTGAGCC 57.164 40.909 7.05 0.11 0.00 4.70
365 366 4.206375 TGTGAACTTGAATTCTTGAGCCA 58.794 39.130 7.05 2.38 0.00 4.75
366 367 4.276678 TGTGAACTTGAATTCTTGAGCCAG 59.723 41.667 7.05 0.00 0.00 4.85
367 368 4.516698 GTGAACTTGAATTCTTGAGCCAGA 59.483 41.667 7.05 0.00 0.00 3.86
368 369 5.009010 GTGAACTTGAATTCTTGAGCCAGAA 59.991 40.000 7.05 0.00 37.20 3.02
369 370 5.771666 TGAACTTGAATTCTTGAGCCAGAAT 59.228 36.000 7.05 0.00 44.05 2.40
370 371 6.942005 TGAACTTGAATTCTTGAGCCAGAATA 59.058 34.615 7.05 0.00 41.78 1.75
371 372 7.448161 TGAACTTGAATTCTTGAGCCAGAATAA 59.552 33.333 7.05 0.00 41.78 1.40
372 373 7.388460 ACTTGAATTCTTGAGCCAGAATAAG 57.612 36.000 7.05 7.45 41.78 1.73
373 374 7.170965 ACTTGAATTCTTGAGCCAGAATAAGA 58.829 34.615 7.05 0.00 41.78 2.10
374 375 7.336427 ACTTGAATTCTTGAGCCAGAATAAGAG 59.664 37.037 7.05 10.27 41.78 2.85
375 376 5.587844 TGAATTCTTGAGCCAGAATAAGAGC 59.412 40.000 7.05 0.00 41.78 4.09
376 377 4.833478 TTCTTGAGCCAGAATAAGAGCT 57.167 40.909 0.00 0.00 38.56 4.09
380 381 3.385193 GAGCCAGAATAAGAGCTCTCC 57.615 52.381 18.55 6.97 46.50 3.71
381 382 1.686052 AGCCAGAATAAGAGCTCTCCG 59.314 52.381 18.55 2.03 0.00 4.63
382 383 1.270041 GCCAGAATAAGAGCTCTCCGG 60.270 57.143 18.55 11.98 0.00 5.14
383 384 1.270041 CCAGAATAAGAGCTCTCCGGC 60.270 57.143 18.55 7.57 0.00 6.13
384 385 1.410517 CAGAATAAGAGCTCTCCGGCA 59.589 52.381 18.55 0.44 34.17 5.69
385 386 2.036992 CAGAATAAGAGCTCTCCGGCAT 59.963 50.000 18.55 2.17 34.17 4.40
386 387 2.036992 AGAATAAGAGCTCTCCGGCATG 59.963 50.000 18.55 0.00 34.17 4.06
387 388 0.034616 ATAAGAGCTCTCCGGCATGC 59.965 55.000 18.55 9.90 34.17 4.06
388 389 1.045350 TAAGAGCTCTCCGGCATGCT 61.045 55.000 18.55 13.25 38.59 3.79
389 390 1.045350 AAGAGCTCTCCGGCATGCTA 61.045 55.000 18.55 2.62 35.76 3.49
390 391 1.006337 GAGCTCTCCGGCATGCTAG 60.006 63.158 18.92 12.72 35.76 3.42
391 392 2.664518 GCTCTCCGGCATGCTAGC 60.665 66.667 18.92 8.10 0.00 3.42
392 393 2.817424 CTCTCCGGCATGCTAGCA 59.183 61.111 21.85 21.85 35.83 3.49
393 394 1.300775 CTCTCCGGCATGCTAGCAG 60.301 63.158 23.89 15.54 35.83 4.24
394 395 2.971413 CTCCGGCATGCTAGCAGC 60.971 66.667 23.89 23.37 42.82 5.25
395 396 3.457625 CTCCGGCATGCTAGCAGCT 62.458 63.158 27.07 11.22 42.97 4.24
396 397 2.971413 CCGGCATGCTAGCAGCTC 60.971 66.667 27.07 19.61 42.97 4.09
397 398 2.202974 CGGCATGCTAGCAGCTCA 60.203 61.111 27.07 6.63 42.97 4.26
398 399 1.816679 CGGCATGCTAGCAGCTCAA 60.817 57.895 27.07 5.97 42.97 3.02
399 400 1.726265 GGCATGCTAGCAGCTCAAC 59.274 57.895 27.07 14.24 42.97 3.18
400 401 1.722636 GGCATGCTAGCAGCTCAACC 61.723 60.000 27.07 17.13 42.97 3.77
401 402 1.028330 GCATGCTAGCAGCTCAACCA 61.028 55.000 23.89 0.00 42.97 3.67
402 403 0.731417 CATGCTAGCAGCTCAACCAC 59.269 55.000 23.89 0.00 42.97 4.16
403 404 0.393537 ATGCTAGCAGCTCAACCACC 60.394 55.000 23.89 0.00 42.97 4.61
404 405 1.746991 GCTAGCAGCTCAACCACCC 60.747 63.158 10.63 0.00 38.45 4.61
405 406 1.078143 CTAGCAGCTCAACCACCCC 60.078 63.158 0.00 0.00 0.00 4.95
406 407 1.841302 CTAGCAGCTCAACCACCCCA 61.841 60.000 0.00 0.00 0.00 4.96
407 408 1.207488 TAGCAGCTCAACCACCCCAT 61.207 55.000 0.00 0.00 0.00 4.00
408 409 2.048603 GCAGCTCAACCACCCCATC 61.049 63.158 0.00 0.00 0.00 3.51
409 410 1.379916 CAGCTCAACCACCCCATCA 59.620 57.895 0.00 0.00 0.00 3.07
410 411 0.033796 CAGCTCAACCACCCCATCAT 60.034 55.000 0.00 0.00 0.00 2.45
411 412 0.257039 AGCTCAACCACCCCATCATC 59.743 55.000 0.00 0.00 0.00 2.92
412 413 1.097547 GCTCAACCACCCCATCATCG 61.098 60.000 0.00 0.00 0.00 3.84
413 414 0.253044 CTCAACCACCCCATCATCGT 59.747 55.000 0.00 0.00 0.00 3.73
414 415 0.035534 TCAACCACCCCATCATCGTG 60.036 55.000 0.00 0.00 0.00 4.35
415 416 0.035534 CAACCACCCCATCATCGTGA 60.036 55.000 0.00 0.00 0.00 4.35
416 417 0.253044 AACCACCCCATCATCGTGAG 59.747 55.000 0.00 0.00 0.00 3.51
446 447 2.198827 AAAATGACACGATCCTGCCA 57.801 45.000 0.00 0.00 0.00 4.92
447 448 1.742761 AAATGACACGATCCTGCCAG 58.257 50.000 0.00 0.00 0.00 4.85
448 449 0.107508 AATGACACGATCCTGCCAGG 60.108 55.000 3.69 3.69 36.46 4.45
456 457 4.722700 TCCTGCCAGGAAAGCGCC 62.723 66.667 12.03 0.00 42.51 6.53
458 459 2.753043 CTGCCAGGAAAGCGCCAT 60.753 61.111 2.29 0.00 0.00 4.40
459 460 3.060020 CTGCCAGGAAAGCGCCATG 62.060 63.158 2.29 0.00 0.00 3.66
460 461 3.830192 GCCAGGAAAGCGCCATGG 61.830 66.667 7.63 7.63 32.62 3.66
461 462 2.361610 CCAGGAAAGCGCCATGGT 60.362 61.111 14.67 0.00 0.00 3.55
462 463 1.978617 CCAGGAAAGCGCCATGGTT 60.979 57.895 14.67 0.00 40.81 3.67
463 464 1.213537 CAGGAAAGCGCCATGGTTG 59.786 57.895 14.67 7.72 38.56 3.77
464 465 1.228552 AGGAAAGCGCCATGGTTGT 60.229 52.632 14.67 0.00 38.56 3.32
465 466 1.212751 GGAAAGCGCCATGGTTGTC 59.787 57.895 14.67 4.24 38.56 3.18
466 467 1.212751 GAAAGCGCCATGGTTGTCC 59.787 57.895 14.67 0.00 38.56 4.02
467 468 2.212900 GAAAGCGCCATGGTTGTCCC 62.213 60.000 14.67 0.00 38.56 4.46
468 469 2.713531 AAAGCGCCATGGTTGTCCCT 62.714 55.000 14.67 0.00 38.56 4.20
469 470 3.443045 GCGCCATGGTTGTCCCTG 61.443 66.667 14.67 0.00 0.00 4.45
470 471 2.350895 CGCCATGGTTGTCCCTGA 59.649 61.111 14.67 0.00 32.27 3.86
471 472 1.746615 CGCCATGGTTGTCCCTGAG 60.747 63.158 14.67 0.00 32.27 3.35
472 473 1.379044 GCCATGGTTGTCCCTGAGG 60.379 63.158 14.67 0.00 32.27 3.86
473 474 1.852157 GCCATGGTTGTCCCTGAGGA 61.852 60.000 14.67 0.00 41.08 3.71
487 488 3.299375 AGGACAACTCCTCCCCCT 58.701 61.111 0.00 0.00 44.59 4.79
488 489 1.081277 AGGACAACTCCTCCCCCTC 59.919 63.158 0.00 0.00 44.59 4.30
489 490 1.996187 GGACAACTCCTCCCCCTCC 60.996 68.421 0.00 0.00 33.07 4.30
490 491 1.996187 GACAACTCCTCCCCCTCCC 60.996 68.421 0.00 0.00 0.00 4.30
491 492 2.456840 CAACTCCTCCCCCTCCCT 59.543 66.667 0.00 0.00 0.00 4.20
492 493 1.229984 CAACTCCTCCCCCTCCCTT 60.230 63.158 0.00 0.00 0.00 3.95
493 494 1.229984 AACTCCTCCCCCTCCCTTG 60.230 63.158 0.00 0.00 0.00 3.61
494 495 3.093172 CTCCTCCCCCTCCCTTGC 61.093 72.222 0.00 0.00 0.00 4.01
495 496 4.760220 TCCTCCCCCTCCCTTGCC 62.760 72.222 0.00 0.00 0.00 4.52
496 497 4.767892 CCTCCCCCTCCCTTGCCT 62.768 72.222 0.00 0.00 0.00 4.75
497 498 2.615288 CTCCCCCTCCCTTGCCTT 60.615 66.667 0.00 0.00 0.00 4.35
498 499 2.941025 TCCCCCTCCCTTGCCTTG 60.941 66.667 0.00 0.00 0.00 3.61
499 500 4.066139 CCCCCTCCCTTGCCTTGG 62.066 72.222 0.00 0.00 0.00 3.61
500 501 3.268032 CCCCTCCCTTGCCTTGGT 61.268 66.667 0.00 0.00 0.00 3.67
501 502 2.356667 CCCTCCCTTGCCTTGGTC 59.643 66.667 0.00 0.00 0.00 4.02
502 503 2.356667 CCTCCCTTGCCTTGGTCC 59.643 66.667 0.00 0.00 0.00 4.46
503 504 2.234296 CCTCCCTTGCCTTGGTCCT 61.234 63.158 0.00 0.00 0.00 3.85
504 505 1.770324 CTCCCTTGCCTTGGTCCTT 59.230 57.895 0.00 0.00 0.00 3.36
505 506 0.322906 CTCCCTTGCCTTGGTCCTTC 60.323 60.000 0.00 0.00 0.00 3.46
506 507 1.675641 CCCTTGCCTTGGTCCTTCG 60.676 63.158 0.00 0.00 0.00 3.79
507 508 2.335712 CCTTGCCTTGGTCCTTCGC 61.336 63.158 0.00 0.00 0.00 4.70
508 509 2.282180 TTGCCTTGGTCCTTCGCC 60.282 61.111 0.00 0.00 0.00 5.54
509 510 3.126703 TTGCCTTGGTCCTTCGCCA 62.127 57.895 0.00 0.00 0.00 5.69
510 511 2.282180 GCCTTGGTCCTTCGCCAA 60.282 61.111 0.00 0.00 43.04 4.52
511 512 2.626780 GCCTTGGTCCTTCGCCAAC 61.627 63.158 0.00 0.00 40.69 3.77
512 513 2.325082 CCTTGGTCCTTCGCCAACG 61.325 63.158 0.00 0.00 40.69 4.10
513 514 2.966309 CTTGGTCCTTCGCCAACGC 61.966 63.158 0.00 0.00 40.69 4.84
532 533 2.739287 CCGTCCGCGTTTGCCTTA 60.739 61.111 4.92 0.00 38.08 2.69
533 534 2.319096 CCGTCCGCGTTTGCCTTAA 61.319 57.895 4.92 0.00 38.08 1.85
534 535 1.154543 CGTCCGCGTTTGCCTTAAC 60.155 57.895 4.92 0.00 38.08 2.01
535 536 1.208358 GTCCGCGTTTGCCTTAACC 59.792 57.895 4.92 0.00 38.08 2.85
536 537 1.967494 TCCGCGTTTGCCTTAACCC 60.967 57.895 4.92 0.00 38.08 4.11
537 538 2.262303 CCGCGTTTGCCTTAACCCA 61.262 57.895 4.92 0.00 38.08 4.51
538 539 1.655329 CGCGTTTGCCTTAACCCAA 59.345 52.632 0.00 0.00 38.08 4.12
539 540 0.662077 CGCGTTTGCCTTAACCCAAC 60.662 55.000 0.00 0.00 38.08 3.77
540 541 0.319211 GCGTTTGCCTTAACCCAACC 60.319 55.000 0.00 0.00 33.98 3.77
541 542 0.039888 CGTTTGCCTTAACCCAACCG 60.040 55.000 0.00 0.00 0.00 4.44
542 543 1.034356 GTTTGCCTTAACCCAACCGT 58.966 50.000 0.00 0.00 0.00 4.83
543 544 1.001048 GTTTGCCTTAACCCAACCGTC 60.001 52.381 0.00 0.00 0.00 4.79
544 545 0.537828 TTGCCTTAACCCAACCGTCC 60.538 55.000 0.00 0.00 0.00 4.79
545 546 1.377612 GCCTTAACCCAACCGTCCT 59.622 57.895 0.00 0.00 0.00 3.85
546 547 0.675837 GCCTTAACCCAACCGTCCTC 60.676 60.000 0.00 0.00 0.00 3.71
547 548 0.035725 CCTTAACCCAACCGTCCTCC 60.036 60.000 0.00 0.00 0.00 4.30
548 549 0.390735 CTTAACCCAACCGTCCTCCG 60.391 60.000 0.00 0.00 0.00 4.63
557 558 3.574780 CGTCCTCCGGCTTTTTCC 58.425 61.111 0.00 0.00 0.00 3.13
558 559 1.302192 CGTCCTCCGGCTTTTTCCA 60.302 57.895 0.00 0.00 0.00 3.53
559 560 0.887387 CGTCCTCCGGCTTTTTCCAA 60.887 55.000 0.00 0.00 0.00 3.53
560 561 0.596577 GTCCTCCGGCTTTTTCCAAC 59.403 55.000 0.00 0.00 0.00 3.77
561 562 0.183971 TCCTCCGGCTTTTTCCAACA 59.816 50.000 0.00 0.00 0.00 3.33
562 563 0.598065 CCTCCGGCTTTTTCCAACAG 59.402 55.000 0.00 0.00 0.00 3.16
563 564 1.318576 CTCCGGCTTTTTCCAACAGT 58.681 50.000 0.00 0.00 0.00 3.55
564 565 1.266989 CTCCGGCTTTTTCCAACAGTC 59.733 52.381 0.00 0.00 0.00 3.51
565 566 1.133915 TCCGGCTTTTTCCAACAGTCT 60.134 47.619 0.00 0.00 0.00 3.24
566 567 2.105134 TCCGGCTTTTTCCAACAGTCTA 59.895 45.455 0.00 0.00 0.00 2.59
567 568 2.225727 CCGGCTTTTTCCAACAGTCTAC 59.774 50.000 0.00 0.00 0.00 2.59
568 569 2.225727 CGGCTTTTTCCAACAGTCTACC 59.774 50.000 0.00 0.00 0.00 3.18
569 570 3.487372 GGCTTTTTCCAACAGTCTACCT 58.513 45.455 0.00 0.00 0.00 3.08
570 571 3.889538 GGCTTTTTCCAACAGTCTACCTT 59.110 43.478 0.00 0.00 0.00 3.50
571 572 4.023107 GGCTTTTTCCAACAGTCTACCTTC 60.023 45.833 0.00 0.00 0.00 3.46
572 573 4.578928 GCTTTTTCCAACAGTCTACCTTCA 59.421 41.667 0.00 0.00 0.00 3.02
573 574 5.505819 GCTTTTTCCAACAGTCTACCTTCAC 60.506 44.000 0.00 0.00 0.00 3.18
574 575 4.764050 TTTCCAACAGTCTACCTTCACA 57.236 40.909 0.00 0.00 0.00 3.58
575 576 4.974645 TTCCAACAGTCTACCTTCACAT 57.025 40.909 0.00 0.00 0.00 3.21
576 577 4.974645 TCCAACAGTCTACCTTCACATT 57.025 40.909 0.00 0.00 0.00 2.71
577 578 5.304686 TCCAACAGTCTACCTTCACATTT 57.695 39.130 0.00 0.00 0.00 2.32
578 579 6.428083 TCCAACAGTCTACCTTCACATTTA 57.572 37.500 0.00 0.00 0.00 1.40
579 580 6.833041 TCCAACAGTCTACCTTCACATTTAA 58.167 36.000 0.00 0.00 0.00 1.52
580 581 7.284074 TCCAACAGTCTACCTTCACATTTAAA 58.716 34.615 0.00 0.00 0.00 1.52
581 582 7.776030 TCCAACAGTCTACCTTCACATTTAAAA 59.224 33.333 0.00 0.00 0.00 1.52
582 583 8.410141 CCAACAGTCTACCTTCACATTTAAAAA 58.590 33.333 0.00 0.00 0.00 1.94
583 584 9.233232 CAACAGTCTACCTTCACATTTAAAAAC 57.767 33.333 0.00 0.00 0.00 2.43
584 585 8.514330 ACAGTCTACCTTCACATTTAAAAACA 57.486 30.769 0.00 0.00 0.00 2.83
585 586 9.131791 ACAGTCTACCTTCACATTTAAAAACAT 57.868 29.630 0.00 0.00 0.00 2.71
586 587 9.398170 CAGTCTACCTTCACATTTAAAAACATG 57.602 33.333 0.00 0.00 0.00 3.21
587 588 8.576442 AGTCTACCTTCACATTTAAAAACATGG 58.424 33.333 0.00 0.00 0.00 3.66
588 589 8.357402 GTCTACCTTCACATTTAAAAACATGGT 58.643 33.333 0.00 0.00 0.00 3.55
589 590 8.919145 TCTACCTTCACATTTAAAAACATGGTT 58.081 29.630 0.00 0.00 0.00 3.67
592 593 9.705290 ACCTTCACATTTAAAAACATGGTTATC 57.295 29.630 0.00 0.00 0.00 1.75
593 594 9.927668 CCTTCACATTTAAAAACATGGTTATCT 57.072 29.630 0.00 0.00 0.00 1.98
595 596 9.619316 TTCACATTTAAAAACATGGTTATCTCG 57.381 29.630 0.00 0.00 0.00 4.04
596 597 9.004717 TCACATTTAAAAACATGGTTATCTCGA 57.995 29.630 0.00 0.00 0.00 4.04
597 598 9.277565 CACATTTAAAAACATGGTTATCTCGAG 57.722 33.333 5.93 5.93 0.00 4.04
598 599 9.010029 ACATTTAAAAACATGGTTATCTCGAGT 57.990 29.630 13.13 2.46 0.00 4.18
599 600 9.840427 CATTTAAAAACATGGTTATCTCGAGTT 57.160 29.630 13.13 6.80 0.00 3.01
604 605 9.673454 AAAAACATGGTTATCTCGAGTTAAAAC 57.327 29.630 15.71 13.10 0.00 2.43
605 606 8.617290 AAACATGGTTATCTCGAGTTAAAACT 57.383 30.769 15.71 0.00 43.16 2.66
606 607 8.617290 AACATGGTTATCTCGAGTTAAAACTT 57.383 30.769 15.71 8.76 39.88 2.66
607 608 8.617290 ACATGGTTATCTCGAGTTAAAACTTT 57.383 30.769 15.71 1.29 39.88 2.66
608 609 8.504005 ACATGGTTATCTCGAGTTAAAACTTTG 58.496 33.333 15.71 14.93 39.88 2.77
609 610 8.717821 CATGGTTATCTCGAGTTAAAACTTTGA 58.282 33.333 15.71 0.00 39.88 2.69
610 611 8.842358 TGGTTATCTCGAGTTAAAACTTTGAT 57.158 30.769 15.71 4.67 39.88 2.57
611 612 8.717821 TGGTTATCTCGAGTTAAAACTTTGATG 58.282 33.333 15.71 0.00 39.88 3.07
612 613 8.718734 GGTTATCTCGAGTTAAAACTTTGATGT 58.281 33.333 15.71 0.00 39.88 3.06
617 618 9.100554 TCTCGAGTTAAAACTTTGATGTTAACA 57.899 29.630 11.41 11.41 39.88 2.41
684 685 1.227764 CATCTCAGCCCATCCACGG 60.228 63.158 0.00 0.00 0.00 4.94
851 852 0.974010 TAATCCGACCGTTGAGGCCT 60.974 55.000 3.86 3.86 46.52 5.19
853 854 3.691342 CCGACCGTTGAGGCCTCA 61.691 66.667 32.00 32.00 46.52 3.86
934 935 0.611896 CCCAATTCCAAACTCCGCCT 60.612 55.000 0.00 0.00 0.00 5.52
935 936 0.811281 CCAATTCCAAACTCCGCCTC 59.189 55.000 0.00 0.00 0.00 4.70
1088 1090 1.484444 CCCCTTCCCGGATCTCATCC 61.484 65.000 0.73 0.00 46.22 3.51
1207 1209 3.476646 CTGCGTGCTCGTGCTCTG 61.477 66.667 11.19 5.26 40.48 3.35
1235 1237 4.378978 CGGATTTAGTTGGCGATTTGTTCA 60.379 41.667 0.00 0.00 0.00 3.18
1249 1251 1.140312 TGTTCACTTCTGCTTCCCCT 58.860 50.000 0.00 0.00 0.00 4.79
1259 1261 1.006220 GCTTCCCCTTGGCGTTTTG 60.006 57.895 0.00 0.00 0.00 2.44
1260 1262 1.665442 CTTCCCCTTGGCGTTTTGG 59.335 57.895 0.00 0.00 0.00 3.28
1271 1273 3.625897 GTTTTGGGGGTGGGCTGC 61.626 66.667 0.00 0.00 0.00 5.25
1283 1285 0.842905 TGGGCTGCTGGTTAGGGTTA 60.843 55.000 0.00 0.00 0.00 2.85
1292 1294 2.766828 CTGGTTAGGGTTAGCTAGCTGT 59.233 50.000 27.68 4.38 0.00 4.40
1293 1295 3.958798 CTGGTTAGGGTTAGCTAGCTGTA 59.041 47.826 27.68 12.25 0.00 2.74
1296 1298 4.202131 GGTTAGGGTTAGCTAGCTGTAGTG 60.202 50.000 27.68 0.00 0.00 2.74
1297 1299 3.103080 AGGGTTAGCTAGCTGTAGTGT 57.897 47.619 27.68 4.54 0.00 3.55
1298 1300 3.025262 AGGGTTAGCTAGCTGTAGTGTC 58.975 50.000 27.68 9.80 0.00 3.67
1327 1329 2.578940 TGAAATGGTCCGGGTCCTATTT 59.421 45.455 11.62 13.71 0.00 1.40
1328 1330 3.010808 TGAAATGGTCCGGGTCCTATTTT 59.989 43.478 11.62 8.52 0.00 1.82
1341 1343 5.077564 GGTCCTATTTTCTTCTTGGTTGGT 58.922 41.667 0.00 0.00 0.00 3.67
1342 1344 5.538813 GGTCCTATTTTCTTCTTGGTTGGTT 59.461 40.000 0.00 0.00 0.00 3.67
1361 1363 6.478512 TGGTTCAAGATTATATTTTGGGCC 57.521 37.500 0.00 0.00 0.00 5.80
1371 1373 2.022718 ATTTTGGGCCCAGTAAAGCA 57.977 45.000 26.87 4.99 0.00 3.91
1495 1498 7.902920 AAAAGATGCATCTTGTGGGTAATAT 57.097 32.000 36.16 17.70 45.83 1.28
1496 1499 6.889301 AAGATGCATCTTGTGGGTAATATG 57.111 37.500 35.32 0.00 44.91 1.78
1497 1500 5.945310 AGATGCATCTTGTGGGTAATATGT 58.055 37.500 23.75 0.00 31.97 2.29
1498 1501 7.078249 AGATGCATCTTGTGGGTAATATGTA 57.922 36.000 23.75 0.00 31.97 2.29
1499 1502 7.693132 AGATGCATCTTGTGGGTAATATGTAT 58.307 34.615 23.75 0.00 31.97 2.29
1500 1503 8.825774 AGATGCATCTTGTGGGTAATATGTATA 58.174 33.333 23.75 0.00 31.97 1.47
1522 1525 3.992943 ATATCGTTTGGTCAACCTGGA 57.007 42.857 0.00 0.00 36.82 3.86
1578 1587 7.275560 GTGGAGCAATAATGGTGTATTTTTGTC 59.724 37.037 0.00 0.00 38.89 3.18
1588 1597 3.746492 GTGTATTTTTGTCGCCTCTCTGT 59.254 43.478 0.00 0.00 0.00 3.41
1766 1777 9.710900 AATTTGAGTGAAGGAATTTATGTTTCC 57.289 29.630 0.00 0.00 42.51 3.13
1776 1787 3.644966 TTTATGTTTCCCCGAGCTGAT 57.355 42.857 0.00 0.00 0.00 2.90
1790 1801 5.235186 CCCGAGCTGATTTAGATAACAAGTG 59.765 44.000 0.00 0.00 0.00 3.16
1842 1853 8.491152 CGGATCTATTTGTTCTGCTACTAAATG 58.509 37.037 0.00 0.00 0.00 2.32
1936 1947 8.822805 TCTGTTTTCCCTACTAAATGTCTATGT 58.177 33.333 0.00 0.00 0.00 2.29
2107 2118 6.451393 ACAGACTAGTCAGATTGTGTCTTTC 58.549 40.000 24.44 0.00 34.00 2.62
2244 2257 6.483307 TGCCATGCATAGTAAGTTATGAGTTC 59.517 38.462 0.00 0.00 33.75 3.01
2416 2433 4.907879 AGTTCTTTTCAAGAGCCAACTG 57.092 40.909 0.00 0.00 39.29 3.16
2425 2442 4.206375 TCAAGAGCCAACTGAAACAATCA 58.794 39.130 0.00 0.00 36.38 2.57
2557 2574 9.923143 CCAACTATAACACGGAGAATCATTATA 57.077 33.333 0.00 0.00 36.25 0.98
2597 2615 4.388165 GTCTGATCATCAGTTCCATATGCG 59.612 45.833 14.56 0.00 44.58 4.73
2741 2759 8.067780 TGAATGTATTCGTGGTAAATGTATCG 57.932 34.615 0.65 0.00 39.62 2.92
2898 2916 7.166167 ACCTTTTAGTTGGAGTACAGGTATTG 58.834 38.462 0.00 0.00 0.00 1.90
2909 2927 5.978814 AGTACAGGTATTGGCTCTACTTTG 58.021 41.667 0.00 0.00 0.00 2.77
2914 2932 4.019321 AGGTATTGGCTCTACTTTGCTTCA 60.019 41.667 0.00 0.00 0.00 3.02
2918 2936 4.771590 TGGCTCTACTTTGCTTCAATTG 57.228 40.909 0.00 0.00 0.00 2.32
2932 2950 7.649533 TGCTTCAATTGTTATGATCTGGAAT 57.350 32.000 5.13 0.00 0.00 3.01
2986 3004 3.369892 GCTTTTCATGACAGGGAGAGCTA 60.370 47.826 3.77 0.00 0.00 3.32
3022 3040 2.375174 TGGCTGGTCTGTTCATACCTTT 59.625 45.455 8.42 0.00 36.67 3.11
3037 3055 3.036075 ACCTTTAACCGAAGAAGGACG 57.964 47.619 8.25 0.00 41.97 4.79
3049 3067 0.736325 GAAGGACGATGTGTGGGACG 60.736 60.000 0.00 0.00 0.00 4.79
3067 3085 3.306156 GGACGTTAGATTATCTGCCTCCC 60.306 52.174 4.78 0.00 0.00 4.30
3097 3115 9.816787 ATGGGTACTTTCCTTTTCATTTACTTA 57.183 29.630 0.00 0.00 0.00 2.24
3197 3215 1.554160 CCAGTGGAGAAGACAGAGCAT 59.446 52.381 1.68 0.00 0.00 3.79
3290 3308 2.147150 GCCAAAGAACACTCTGAGACC 58.853 52.381 12.44 0.00 30.03 3.85
3378 3396 3.825308 TCGACGCTCTTACAAACGTTAT 58.175 40.909 0.00 0.00 39.16 1.89
3419 3437 3.219281 GTCCAAAGTAGTCTTTTGGGCA 58.781 45.455 13.53 0.00 41.31 5.36
3432 3450 6.482973 AGTCTTTTGGGCATTTGTACATTTTG 59.517 34.615 0.00 0.00 0.00 2.44
3810 3863 7.553044 AGGTACCTGATTACAACAAGAAATAGC 59.447 37.037 15.42 0.00 0.00 2.97
3812 3865 9.595823 GTACCTGATTACAACAAGAAATAGCTA 57.404 33.333 0.00 0.00 0.00 3.32
3859 3912 3.496884 TGAACGTCTGTCTTACAAATGGC 59.503 43.478 0.00 0.00 0.00 4.40
3860 3913 3.402628 ACGTCTGTCTTACAAATGGCT 57.597 42.857 0.00 0.00 0.00 4.75
3897 3951 1.527034 TGCAGATGCTGGTGAAGAAC 58.473 50.000 6.35 0.00 42.66 3.01
3900 3954 1.998315 CAGATGCTGGTGAAGAACTCG 59.002 52.381 0.00 0.00 0.00 4.18
3906 3960 0.033504 TGGTGAAGAACTCGGCTCAC 59.966 55.000 0.00 0.00 0.00 3.51
3921 3975 3.782443 CACCGCCTACCCCTCCAC 61.782 72.222 0.00 0.00 0.00 4.02
4175 4229 1.812235 CCAACATGTAGCAGCTGTCA 58.188 50.000 16.64 12.61 0.00 3.58
4284 4338 0.112412 ATTGGAGGTTCCCGCAGTTT 59.888 50.000 0.00 0.00 35.03 2.66
4313 4367 6.603997 TCCGGTGCCTTGTAATTGTTATTATT 59.396 34.615 0.00 0.00 0.00 1.40
4314 4368 7.774157 TCCGGTGCCTTGTAATTGTTATTATTA 59.226 33.333 0.00 0.00 0.00 0.98
4340 4394 2.965147 TCAGGTGATCGGAATGATAGCA 59.035 45.455 0.00 0.00 37.47 3.49
4342 4396 3.744942 CAGGTGATCGGAATGATAGCAAG 59.255 47.826 0.00 0.00 37.47 4.01
4345 4399 2.079925 GATCGGAATGATAGCAAGGGC 58.920 52.381 0.00 0.00 37.47 5.19
4392 4470 1.956477 AGCGAACAATTCAACCTGCTT 59.044 42.857 0.00 0.00 0.00 3.91
4393 4471 2.362077 AGCGAACAATTCAACCTGCTTT 59.638 40.909 0.00 0.00 0.00 3.51
4394 4472 3.568007 AGCGAACAATTCAACCTGCTTTA 59.432 39.130 0.00 0.00 0.00 1.85
4442 4520 4.935352 TCTTTTGAAAATCACCACCCTG 57.065 40.909 0.00 0.00 0.00 4.45
4443 4521 4.285863 TCTTTTGAAAATCACCACCCTGT 58.714 39.130 0.00 0.00 0.00 4.00
4444 4522 4.340950 TCTTTTGAAAATCACCACCCTGTC 59.659 41.667 0.00 0.00 0.00 3.51
4445 4523 3.593442 TTGAAAATCACCACCCTGTCT 57.407 42.857 0.00 0.00 0.00 3.41
4446 4524 3.593442 TGAAAATCACCACCCTGTCTT 57.407 42.857 0.00 0.00 0.00 3.01
4447 4525 3.909732 TGAAAATCACCACCCTGTCTTT 58.090 40.909 0.00 0.00 0.00 2.52
4448 4526 5.055265 TGAAAATCACCACCCTGTCTTTA 57.945 39.130 0.00 0.00 0.00 1.85
4449 4527 4.825085 TGAAAATCACCACCCTGTCTTTAC 59.175 41.667 0.00 0.00 0.00 2.01
4450 4528 4.724279 AAATCACCACCCTGTCTTTACT 57.276 40.909 0.00 0.00 0.00 2.24
4451 4529 5.836024 AAATCACCACCCTGTCTTTACTA 57.164 39.130 0.00 0.00 0.00 1.82
4452 4530 5.422214 AATCACCACCCTGTCTTTACTAG 57.578 43.478 0.00 0.00 0.00 2.57
4453 4531 4.122337 TCACCACCCTGTCTTTACTAGA 57.878 45.455 0.00 0.00 0.00 2.43
4454 4532 4.087182 TCACCACCCTGTCTTTACTAGAG 58.913 47.826 0.00 0.00 32.23 2.43
4455 4533 3.195825 CACCACCCTGTCTTTACTAGAGG 59.804 52.174 0.00 0.00 32.23 3.69
4456 4534 2.168728 CCACCCTGTCTTTACTAGAGGC 59.831 54.545 0.00 0.00 32.23 4.70
4457 4535 2.100989 ACCCTGTCTTTACTAGAGGCG 58.899 52.381 0.00 0.00 32.23 5.52
4458 4536 1.409427 CCCTGTCTTTACTAGAGGCGG 59.591 57.143 0.00 0.00 32.23 6.13
4459 4537 1.409427 CCTGTCTTTACTAGAGGCGGG 59.591 57.143 0.00 0.00 38.79 6.13
4460 4538 1.409427 CTGTCTTTACTAGAGGCGGGG 59.591 57.143 0.00 0.00 32.23 5.73
4461 4539 0.751452 GTCTTTACTAGAGGCGGGGG 59.249 60.000 0.00 0.00 32.23 5.40
4462 4540 1.047034 TCTTTACTAGAGGCGGGGGC 61.047 60.000 0.00 0.00 0.00 5.80
4463 4541 2.365095 CTTTACTAGAGGCGGGGGCG 62.365 65.000 0.00 0.00 0.00 6.13
4512 4590 1.526686 CTGTGCTGCCTGGTTGTCA 60.527 57.895 0.00 0.00 0.00 3.58
4924 5016 1.688269 CCCCGCGGGTCACCTTATTA 61.688 60.000 40.52 0.00 38.25 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.813179 GCGTCGCCATGTGGATGAC 61.813 63.158 5.75 8.72 38.18 3.06
1 2 2.511373 GCGTCGCCATGTGGATGA 60.511 61.111 5.75 0.00 37.39 2.92
2 3 0.809636 TAAGCGTCGCCATGTGGATG 60.810 55.000 14.86 0.00 37.39 3.51
3 4 0.530650 CTAAGCGTCGCCATGTGGAT 60.531 55.000 14.86 0.00 37.39 3.41
4 5 1.153647 CTAAGCGTCGCCATGTGGA 60.154 57.895 14.86 0.00 37.39 4.02
5 6 1.153647 TCTAAGCGTCGCCATGTGG 60.154 57.895 14.86 0.00 38.53 4.17
6 7 0.735978 TGTCTAAGCGTCGCCATGTG 60.736 55.000 14.86 0.24 0.00 3.21
7 8 0.458543 CTGTCTAAGCGTCGCCATGT 60.459 55.000 14.86 0.00 0.00 3.21
8 9 1.148157 CCTGTCTAAGCGTCGCCATG 61.148 60.000 14.86 4.06 0.00 3.66
9 10 1.141881 CCTGTCTAAGCGTCGCCAT 59.858 57.895 14.86 5.94 0.00 4.40
10 11 1.812686 AACCTGTCTAAGCGTCGCCA 61.813 55.000 14.86 3.08 0.00 5.69
11 12 0.171903 TAACCTGTCTAAGCGTCGCC 59.828 55.000 14.86 0.00 0.00 5.54
12 13 2.117910 GATAACCTGTCTAAGCGTCGC 58.882 52.381 9.80 9.80 0.00 5.19
13 14 3.619729 GAGATAACCTGTCTAAGCGTCG 58.380 50.000 0.00 0.00 0.00 5.12
14 15 3.311871 TCGAGATAACCTGTCTAAGCGTC 59.688 47.826 0.00 0.00 0.00 5.19
15 16 3.276857 TCGAGATAACCTGTCTAAGCGT 58.723 45.455 0.00 0.00 0.00 5.07
16 17 3.312973 ACTCGAGATAACCTGTCTAAGCG 59.687 47.826 21.68 0.00 0.00 4.68
17 18 4.904253 ACTCGAGATAACCTGTCTAAGC 57.096 45.455 21.68 0.00 0.00 3.09
40 41 6.616577 AGTGACAACTATTTCCCCCTAAAAA 58.383 36.000 0.00 0.00 33.79 1.94
41 42 6.208840 AGTGACAACTATTTCCCCCTAAAA 57.791 37.500 0.00 0.00 33.79 1.52
42 43 5.853572 AGTGACAACTATTTCCCCCTAAA 57.146 39.130 0.00 0.00 33.79 1.85
43 44 5.853572 AAGTGACAACTATTTCCCCCTAA 57.146 39.130 0.00 0.00 34.77 2.69
44 45 5.853572 AAAGTGACAACTATTTCCCCCTA 57.146 39.130 0.00 0.00 34.77 3.53
45 46 4.741928 AAAGTGACAACTATTTCCCCCT 57.258 40.909 0.00 0.00 34.77 4.79
46 47 6.661805 TGAATAAAGTGACAACTATTTCCCCC 59.338 38.462 0.00 0.00 34.77 5.40
47 48 7.696992 TGAATAAAGTGACAACTATTTCCCC 57.303 36.000 0.00 0.00 34.77 4.81
48 49 9.573133 CATTGAATAAAGTGACAACTATTTCCC 57.427 33.333 0.00 0.00 34.77 3.97
56 57 9.065871 GCTATGAACATTGAATAAAGTGACAAC 57.934 33.333 0.00 0.00 0.00 3.32
57 58 9.013229 AGCTATGAACATTGAATAAAGTGACAA 57.987 29.630 0.00 0.00 0.00 3.18
58 59 8.565896 AGCTATGAACATTGAATAAAGTGACA 57.434 30.769 0.00 0.00 0.00 3.58
59 60 8.125448 GGAGCTATGAACATTGAATAAAGTGAC 58.875 37.037 0.00 0.00 0.00 3.67
60 61 8.049117 AGGAGCTATGAACATTGAATAAAGTGA 58.951 33.333 0.00 0.00 0.00 3.41
61 62 8.218338 AGGAGCTATGAACATTGAATAAAGTG 57.782 34.615 0.00 0.00 0.00 3.16
62 63 8.814038 AAGGAGCTATGAACATTGAATAAAGT 57.186 30.769 0.00 0.00 0.00 2.66
63 64 9.118300 AGAAGGAGCTATGAACATTGAATAAAG 57.882 33.333 0.00 0.00 0.00 1.85
64 65 9.466497 AAGAAGGAGCTATGAACATTGAATAAA 57.534 29.630 0.00 0.00 0.00 1.40
65 66 8.896744 CAAGAAGGAGCTATGAACATTGAATAA 58.103 33.333 0.00 0.00 0.00 1.40
66 67 8.049117 ACAAGAAGGAGCTATGAACATTGAATA 58.951 33.333 0.00 0.00 0.00 1.75
67 68 6.888632 ACAAGAAGGAGCTATGAACATTGAAT 59.111 34.615 0.00 0.00 0.00 2.57
68 69 6.149973 CACAAGAAGGAGCTATGAACATTGAA 59.850 38.462 0.00 0.00 0.00 2.69
69 70 5.645067 CACAAGAAGGAGCTATGAACATTGA 59.355 40.000 0.00 0.00 0.00 2.57
70 71 5.675575 GCACAAGAAGGAGCTATGAACATTG 60.676 44.000 0.00 0.00 0.00 2.82
71 72 4.397417 GCACAAGAAGGAGCTATGAACATT 59.603 41.667 0.00 0.00 0.00 2.71
72 73 3.944015 GCACAAGAAGGAGCTATGAACAT 59.056 43.478 0.00 0.00 0.00 2.71
73 74 3.244526 TGCACAAGAAGGAGCTATGAACA 60.245 43.478 0.00 0.00 0.00 3.18
74 75 3.338249 TGCACAAGAAGGAGCTATGAAC 58.662 45.455 0.00 0.00 0.00 3.18
75 76 3.701205 TGCACAAGAAGGAGCTATGAA 57.299 42.857 0.00 0.00 0.00 2.57
76 77 3.338249 GTTGCACAAGAAGGAGCTATGA 58.662 45.455 0.00 0.00 0.00 2.15
77 78 2.421424 GGTTGCACAAGAAGGAGCTATG 59.579 50.000 0.00 0.00 0.00 2.23
78 79 2.307098 AGGTTGCACAAGAAGGAGCTAT 59.693 45.455 0.00 0.00 0.00 2.97
79 80 1.699634 AGGTTGCACAAGAAGGAGCTA 59.300 47.619 0.00 0.00 0.00 3.32
80 81 0.475906 AGGTTGCACAAGAAGGAGCT 59.524 50.000 0.00 0.00 0.00 4.09
81 82 0.877743 GAGGTTGCACAAGAAGGAGC 59.122 55.000 0.00 0.00 0.00 4.70
82 83 1.528129 GGAGGTTGCACAAGAAGGAG 58.472 55.000 0.00 0.00 0.00 3.69
83 84 0.250295 CGGAGGTTGCACAAGAAGGA 60.250 55.000 0.00 0.00 0.00 3.36
84 85 0.250295 TCGGAGGTTGCACAAGAAGG 60.250 55.000 0.00 0.00 0.00 3.46
85 86 1.151668 CTCGGAGGTTGCACAAGAAG 58.848 55.000 0.00 0.00 0.00 2.85
86 87 0.884704 GCTCGGAGGTTGCACAAGAA 60.885 55.000 7.20 0.00 0.00 2.52
87 88 1.301716 GCTCGGAGGTTGCACAAGA 60.302 57.895 7.20 0.00 0.00 3.02
88 89 0.037326 TAGCTCGGAGGTTGCACAAG 60.037 55.000 15.66 0.00 0.00 3.16
89 90 0.394938 TTAGCTCGGAGGTTGCACAA 59.605 50.000 15.66 0.00 0.00 3.33
90 91 0.320421 GTTAGCTCGGAGGTTGCACA 60.320 55.000 15.66 0.00 0.00 4.57
91 92 1.019805 GGTTAGCTCGGAGGTTGCAC 61.020 60.000 15.66 9.67 0.00 4.57
92 93 1.295423 GGTTAGCTCGGAGGTTGCA 59.705 57.895 15.66 0.00 0.00 4.08
93 94 1.449778 GGGTTAGCTCGGAGGTTGC 60.450 63.158 15.66 8.37 0.00 4.17
94 95 0.391263 GTGGGTTAGCTCGGAGGTTG 60.391 60.000 15.66 0.00 0.00 3.77
95 96 0.544595 AGTGGGTTAGCTCGGAGGTT 60.545 55.000 15.66 0.00 0.00 3.50
96 97 0.971447 GAGTGGGTTAGCTCGGAGGT 60.971 60.000 14.80 14.80 0.00 3.85
97 98 1.817209 GAGTGGGTTAGCTCGGAGG 59.183 63.158 7.20 0.00 0.00 4.30
121 122 2.295909 TGTAAAACTTGGCTCCATGTGC 59.704 45.455 8.02 0.00 35.06 4.57
122 123 4.582701 TTGTAAAACTTGGCTCCATGTG 57.417 40.909 8.02 0.00 35.06 3.21
123 124 4.501400 GCTTTGTAAAACTTGGCTCCATGT 60.501 41.667 2.01 2.01 36.13 3.21
124 125 3.989817 GCTTTGTAAAACTTGGCTCCATG 59.010 43.478 0.79 0.79 0.00 3.66
125 126 3.305335 CGCTTTGTAAAACTTGGCTCCAT 60.305 43.478 0.00 0.00 0.00 3.41
126 127 2.034053 CGCTTTGTAAAACTTGGCTCCA 59.966 45.455 0.00 0.00 0.00 3.86
127 128 2.292292 TCGCTTTGTAAAACTTGGCTCC 59.708 45.455 0.00 0.00 0.00 4.70
128 129 3.619233 TCGCTTTGTAAAACTTGGCTC 57.381 42.857 0.00 0.00 0.00 4.70
129 130 3.821033 AGATCGCTTTGTAAAACTTGGCT 59.179 39.130 0.00 0.00 0.00 4.75
130 131 4.160736 AGATCGCTTTGTAAAACTTGGC 57.839 40.909 0.00 0.00 0.00 4.52
131 132 8.447833 TGTATTAGATCGCTTTGTAAAACTTGG 58.552 33.333 0.00 0.00 0.00 3.61
132 133 9.820229 TTGTATTAGATCGCTTTGTAAAACTTG 57.180 29.630 0.00 0.00 0.00 3.16
138 139 9.042008 GGAAGATTGTATTAGATCGCTTTGTAA 57.958 33.333 0.00 0.00 0.00 2.41
139 140 7.656137 GGGAAGATTGTATTAGATCGCTTTGTA 59.344 37.037 0.00 0.00 0.00 2.41
140 141 6.483640 GGGAAGATTGTATTAGATCGCTTTGT 59.516 38.462 0.00 0.00 0.00 2.83
141 142 6.708054 AGGGAAGATTGTATTAGATCGCTTTG 59.292 38.462 0.00 0.00 0.00 2.77
142 143 6.831976 AGGGAAGATTGTATTAGATCGCTTT 58.168 36.000 0.00 0.00 0.00 3.51
143 144 6.426646 AGGGAAGATTGTATTAGATCGCTT 57.573 37.500 0.00 0.00 0.00 4.68
144 145 7.233757 AGTTAGGGAAGATTGTATTAGATCGCT 59.766 37.037 0.00 0.00 33.84 4.93
145 146 7.379750 AGTTAGGGAAGATTGTATTAGATCGC 58.620 38.462 0.00 0.00 0.00 4.58
149 150 9.364653 GTCCTAGTTAGGGAAGATTGTATTAGA 57.635 37.037 5.40 0.00 43.79 2.10
150 151 9.144298 TGTCCTAGTTAGGGAAGATTGTATTAG 57.856 37.037 5.40 0.00 43.79 1.73
151 152 9.670442 ATGTCCTAGTTAGGGAAGATTGTATTA 57.330 33.333 5.40 0.00 43.79 0.98
152 153 7.989947 TGTCCTAGTTAGGGAAGATTGTATT 57.010 36.000 5.40 0.00 43.79 1.89
153 154 7.569111 ACATGTCCTAGTTAGGGAAGATTGTAT 59.431 37.037 5.40 0.00 43.79 2.29
154 155 6.901300 ACATGTCCTAGTTAGGGAAGATTGTA 59.099 38.462 5.40 0.00 43.79 2.41
155 156 5.726793 ACATGTCCTAGTTAGGGAAGATTGT 59.273 40.000 5.40 0.17 43.79 2.71
156 157 6.051717 CACATGTCCTAGTTAGGGAAGATTG 58.948 44.000 0.00 0.00 43.79 2.67
157 158 5.396884 GCACATGTCCTAGTTAGGGAAGATT 60.397 44.000 0.00 0.00 43.79 2.40
158 159 4.101741 GCACATGTCCTAGTTAGGGAAGAT 59.898 45.833 0.00 0.00 43.79 2.40
159 160 3.451178 GCACATGTCCTAGTTAGGGAAGA 59.549 47.826 0.00 0.00 43.79 2.87
160 161 3.738281 CGCACATGTCCTAGTTAGGGAAG 60.738 52.174 0.00 0.00 43.79 3.46
161 162 2.167693 CGCACATGTCCTAGTTAGGGAA 59.832 50.000 0.00 0.00 43.79 3.97
162 163 1.754803 CGCACATGTCCTAGTTAGGGA 59.245 52.381 0.00 0.00 43.79 4.20
163 164 1.754803 TCGCACATGTCCTAGTTAGGG 59.245 52.381 0.00 0.00 43.79 3.53
164 165 2.427453 AGTCGCACATGTCCTAGTTAGG 59.573 50.000 0.00 0.00 45.02 2.69
165 166 3.784701 AGTCGCACATGTCCTAGTTAG 57.215 47.619 0.00 0.00 0.00 2.34
166 167 4.530710 AAAGTCGCACATGTCCTAGTTA 57.469 40.909 0.00 0.00 0.00 2.24
167 168 3.402628 AAAGTCGCACATGTCCTAGTT 57.597 42.857 0.00 0.00 0.00 2.24
168 169 4.737855 ATAAAGTCGCACATGTCCTAGT 57.262 40.909 0.00 0.00 0.00 2.57
169 170 5.727791 GCAAATAAAGTCGCACATGTCCTAG 60.728 44.000 0.00 0.00 0.00 3.02
170 171 4.094294 GCAAATAAAGTCGCACATGTCCTA 59.906 41.667 0.00 0.00 0.00 2.94
171 172 3.119849 GCAAATAAAGTCGCACATGTCCT 60.120 43.478 0.00 0.00 0.00 3.85
172 173 3.171277 GCAAATAAAGTCGCACATGTCC 58.829 45.455 0.00 0.00 0.00 4.02
173 174 3.171277 GGCAAATAAAGTCGCACATGTC 58.829 45.455 0.00 0.00 0.00 3.06
174 175 2.414029 CGGCAAATAAAGTCGCACATGT 60.414 45.455 0.00 0.00 0.00 3.21
175 176 2.159585 TCGGCAAATAAAGTCGCACATG 60.160 45.455 0.00 0.00 33.43 3.21
176 177 2.080693 TCGGCAAATAAAGTCGCACAT 58.919 42.857 0.00 0.00 33.43 3.21
177 178 1.514003 TCGGCAAATAAAGTCGCACA 58.486 45.000 0.00 0.00 33.43 4.57
178 179 2.705154 GATCGGCAAATAAAGTCGCAC 58.295 47.619 0.00 0.00 33.43 5.34
179 180 1.326245 CGATCGGCAAATAAAGTCGCA 59.674 47.619 7.38 0.00 33.43 5.10
180 181 1.326548 ACGATCGGCAAATAAAGTCGC 59.673 47.619 20.98 0.00 33.43 5.19
181 182 2.346376 CGACGATCGGCAAATAAAGTCG 60.346 50.000 23.01 12.09 42.83 4.18
182 183 2.596807 GCGACGATCGGCAAATAAAGTC 60.597 50.000 23.01 3.33 40.84 3.01
183 184 1.326548 GCGACGATCGGCAAATAAAGT 59.673 47.619 23.01 0.00 40.84 2.66
184 185 1.326245 TGCGACGATCGGCAAATAAAG 59.674 47.619 23.01 3.31 40.84 1.85
185 186 1.061421 GTGCGACGATCGGCAAATAAA 59.939 47.619 23.01 0.00 40.84 1.40
186 187 0.648441 GTGCGACGATCGGCAAATAA 59.352 50.000 23.01 0.00 40.84 1.40
187 188 1.149361 GGTGCGACGATCGGCAAATA 61.149 55.000 23.01 0.00 40.84 1.40
188 189 2.461110 GGTGCGACGATCGGCAAAT 61.461 57.895 23.01 0.00 40.84 2.32
189 190 3.115892 GGTGCGACGATCGGCAAA 61.116 61.111 23.01 4.91 40.84 3.68
193 194 2.274232 TACTTGGGTGCGACGATCGG 62.274 60.000 20.98 3.26 40.84 4.18
194 195 0.457166 TTACTTGGGTGCGACGATCG 60.457 55.000 14.88 14.88 43.89 3.69
195 196 0.997196 GTTACTTGGGTGCGACGATC 59.003 55.000 0.00 0.00 0.00 3.69
196 197 0.606604 AGTTACTTGGGTGCGACGAT 59.393 50.000 0.00 0.00 0.00 3.73
197 198 0.038892 GAGTTACTTGGGTGCGACGA 60.039 55.000 0.00 0.00 0.00 4.20
198 199 0.038526 AGAGTTACTTGGGTGCGACG 60.039 55.000 0.00 0.00 0.00 5.12
199 200 3.308438 TTAGAGTTACTTGGGTGCGAC 57.692 47.619 0.00 0.00 0.00 5.19
200 201 3.322828 AGTTTAGAGTTACTTGGGTGCGA 59.677 43.478 0.00 0.00 0.00 5.10
201 202 3.660865 AGTTTAGAGTTACTTGGGTGCG 58.339 45.455 0.00 0.00 0.00 5.34
202 203 4.001652 GGAGTTTAGAGTTACTTGGGTGC 58.998 47.826 0.00 0.00 0.00 5.01
203 204 5.011738 TCAGGAGTTTAGAGTTACTTGGGTG 59.988 44.000 0.00 0.00 0.00 4.61
204 205 5.152934 TCAGGAGTTTAGAGTTACTTGGGT 58.847 41.667 0.00 0.00 0.00 4.51
205 206 5.740290 TCAGGAGTTTAGAGTTACTTGGG 57.260 43.478 0.00 0.00 0.00 4.12
206 207 7.931948 TCTTTTCAGGAGTTTAGAGTTACTTGG 59.068 37.037 0.00 0.00 0.00 3.61
207 208 8.888579 TCTTTTCAGGAGTTTAGAGTTACTTG 57.111 34.615 0.00 0.00 0.00 3.16
208 209 9.327628 GTTCTTTTCAGGAGTTTAGAGTTACTT 57.672 33.333 0.00 0.00 0.00 2.24
209 210 8.706521 AGTTCTTTTCAGGAGTTTAGAGTTACT 58.293 33.333 0.00 0.00 0.00 2.24
210 211 8.890124 AGTTCTTTTCAGGAGTTTAGAGTTAC 57.110 34.615 0.00 0.00 0.00 2.50
211 212 8.701895 TGAGTTCTTTTCAGGAGTTTAGAGTTA 58.298 33.333 0.00 0.00 0.00 2.24
212 213 7.565680 TGAGTTCTTTTCAGGAGTTTAGAGTT 58.434 34.615 0.00 0.00 0.00 3.01
213 214 7.125792 TGAGTTCTTTTCAGGAGTTTAGAGT 57.874 36.000 0.00 0.00 0.00 3.24
214 215 8.614469 ATTGAGTTCTTTTCAGGAGTTTAGAG 57.386 34.615 0.00 0.00 0.00 2.43
218 219 8.414003 GGTTTATTGAGTTCTTTTCAGGAGTTT 58.586 33.333 0.00 0.00 0.00 2.66
219 220 7.780271 AGGTTTATTGAGTTCTTTTCAGGAGTT 59.220 33.333 0.00 0.00 0.00 3.01
220 221 7.290813 AGGTTTATTGAGTTCTTTTCAGGAGT 58.709 34.615 0.00 0.00 0.00 3.85
221 222 7.751768 AGGTTTATTGAGTTCTTTTCAGGAG 57.248 36.000 0.00 0.00 0.00 3.69
222 223 8.533569 AAAGGTTTATTGAGTTCTTTTCAGGA 57.466 30.769 0.00 0.00 0.00 3.86
240 241 8.141909 GCAACTAGTTGAGGAAATAAAAGGTTT 58.858 33.333 34.43 0.00 42.93 3.27
241 242 7.255836 GGCAACTAGTTGAGGAAATAAAAGGTT 60.256 37.037 34.43 0.00 42.93 3.50
242 243 6.208797 GGCAACTAGTTGAGGAAATAAAAGGT 59.791 38.462 34.43 0.00 42.93 3.50
243 244 6.350194 GGGCAACTAGTTGAGGAAATAAAAGG 60.350 42.308 34.43 7.52 42.93 3.11
244 245 6.208599 TGGGCAACTAGTTGAGGAAATAAAAG 59.791 38.462 34.43 7.94 42.93 2.27
245 246 6.071984 TGGGCAACTAGTTGAGGAAATAAAA 58.928 36.000 34.43 8.17 42.93 1.52
246 247 5.636123 TGGGCAACTAGTTGAGGAAATAAA 58.364 37.500 34.43 9.45 42.93 1.40
247 248 5.249780 TGGGCAACTAGTTGAGGAAATAA 57.750 39.130 34.43 10.86 42.93 1.40
248 249 4.919774 TGGGCAACTAGTTGAGGAAATA 57.080 40.909 34.43 12.78 42.93 1.40
249 250 3.806949 TGGGCAACTAGTTGAGGAAAT 57.193 42.857 34.43 0.00 42.93 2.17
250 251 3.806949 ATGGGCAACTAGTTGAGGAAA 57.193 42.857 34.43 16.84 42.93 3.13
251 252 3.806949 AATGGGCAACTAGTTGAGGAA 57.193 42.857 34.43 18.40 42.93 3.36
252 253 3.844211 ACTAATGGGCAACTAGTTGAGGA 59.156 43.478 34.43 18.66 42.93 3.71
253 254 4.222124 ACTAATGGGCAACTAGTTGAGG 57.778 45.455 34.43 17.95 42.93 3.86
257 258 5.499004 TCTCAACTAATGGGCAACTAGTT 57.501 39.130 1.12 1.12 36.53 2.24
258 259 5.499004 TTCTCAACTAATGGGCAACTAGT 57.501 39.130 0.00 0.00 0.00 2.57
259 260 6.038714 GGATTTCTCAACTAATGGGCAACTAG 59.961 42.308 0.00 0.00 0.00 2.57
260 261 5.885912 GGATTTCTCAACTAATGGGCAACTA 59.114 40.000 0.00 0.00 0.00 2.24
261 262 4.706962 GGATTTCTCAACTAATGGGCAACT 59.293 41.667 0.00 0.00 0.00 3.16
262 263 4.142160 GGGATTTCTCAACTAATGGGCAAC 60.142 45.833 0.00 0.00 0.00 4.17
263 264 4.023291 GGGATTTCTCAACTAATGGGCAA 58.977 43.478 0.00 0.00 0.00 4.52
264 265 3.269381 AGGGATTTCTCAACTAATGGGCA 59.731 43.478 0.00 0.00 0.00 5.36
265 266 3.903467 AGGGATTTCTCAACTAATGGGC 58.097 45.455 0.00 0.00 0.00 5.36
266 267 5.394553 GCAAAGGGATTTCTCAACTAATGGG 60.395 44.000 0.00 0.00 0.00 4.00
267 268 5.185635 TGCAAAGGGATTTCTCAACTAATGG 59.814 40.000 0.00 0.00 0.00 3.16
268 269 6.095377 GTGCAAAGGGATTTCTCAACTAATG 58.905 40.000 0.00 0.00 0.00 1.90
269 270 5.774690 TGTGCAAAGGGATTTCTCAACTAAT 59.225 36.000 0.00 0.00 0.00 1.73
270 271 5.136828 TGTGCAAAGGGATTTCTCAACTAA 58.863 37.500 0.00 0.00 0.00 2.24
271 272 4.724399 TGTGCAAAGGGATTTCTCAACTA 58.276 39.130 0.00 0.00 0.00 2.24
272 273 3.565307 TGTGCAAAGGGATTTCTCAACT 58.435 40.909 0.00 0.00 0.00 3.16
273 274 4.525912 ATGTGCAAAGGGATTTCTCAAC 57.474 40.909 0.00 0.00 0.00 3.18
274 275 4.834496 AGAATGTGCAAAGGGATTTCTCAA 59.166 37.500 0.00 0.00 0.00 3.02
275 276 4.410099 AGAATGTGCAAAGGGATTTCTCA 58.590 39.130 0.00 0.00 0.00 3.27
276 277 5.047802 TCAAGAATGTGCAAAGGGATTTCTC 60.048 40.000 0.00 0.00 0.00 2.87
277 278 4.834496 TCAAGAATGTGCAAAGGGATTTCT 59.166 37.500 0.00 0.00 0.00 2.52
278 279 5.138125 TCAAGAATGTGCAAAGGGATTTC 57.862 39.130 0.00 0.00 0.00 2.17
279 280 5.482878 AGATCAAGAATGTGCAAAGGGATTT 59.517 36.000 0.00 0.00 0.00 2.17
280 281 5.021458 AGATCAAGAATGTGCAAAGGGATT 58.979 37.500 0.00 0.00 0.00 3.01
281 282 4.607239 AGATCAAGAATGTGCAAAGGGAT 58.393 39.130 0.00 0.00 0.00 3.85
282 283 4.038271 AGATCAAGAATGTGCAAAGGGA 57.962 40.909 0.00 0.00 0.00 4.20
283 284 4.796038 AAGATCAAGAATGTGCAAAGGG 57.204 40.909 0.00 0.00 0.00 3.95
284 285 5.644644 GGTAAGATCAAGAATGTGCAAAGG 58.355 41.667 0.00 0.00 0.00 3.11
285 286 5.122239 TCGGTAAGATCAAGAATGTGCAAAG 59.878 40.000 0.00 0.00 0.00 2.77
286 287 5.000591 TCGGTAAGATCAAGAATGTGCAAA 58.999 37.500 0.00 0.00 0.00 3.68
287 288 4.391830 GTCGGTAAGATCAAGAATGTGCAA 59.608 41.667 0.00 0.00 0.00 4.08
288 289 3.932710 GTCGGTAAGATCAAGAATGTGCA 59.067 43.478 0.00 0.00 0.00 4.57
289 290 3.932710 TGTCGGTAAGATCAAGAATGTGC 59.067 43.478 0.00 0.00 0.00 4.57
290 291 4.033358 GCTGTCGGTAAGATCAAGAATGTG 59.967 45.833 0.00 0.00 0.00 3.21
291 292 4.081420 AGCTGTCGGTAAGATCAAGAATGT 60.081 41.667 0.00 0.00 0.00 2.71
292 293 4.437239 AGCTGTCGGTAAGATCAAGAATG 58.563 43.478 0.00 0.00 0.00 2.67
293 294 4.442192 GGAGCTGTCGGTAAGATCAAGAAT 60.442 45.833 0.00 0.00 31.61 2.40
294 295 3.119101 GGAGCTGTCGGTAAGATCAAGAA 60.119 47.826 0.00 0.00 31.61 2.52
295 296 2.427453 GGAGCTGTCGGTAAGATCAAGA 59.573 50.000 0.00 0.00 31.61 3.02
296 297 2.166459 TGGAGCTGTCGGTAAGATCAAG 59.834 50.000 0.00 0.00 31.61 3.02
297 298 2.176045 TGGAGCTGTCGGTAAGATCAA 58.824 47.619 0.00 0.00 31.61 2.57
298 299 1.847328 TGGAGCTGTCGGTAAGATCA 58.153 50.000 0.00 0.00 31.61 2.92
299 300 2.362397 TCATGGAGCTGTCGGTAAGATC 59.638 50.000 0.00 0.00 0.00 2.75
300 301 2.363680 CTCATGGAGCTGTCGGTAAGAT 59.636 50.000 0.00 0.00 0.00 2.40
301 302 1.751351 CTCATGGAGCTGTCGGTAAGA 59.249 52.381 0.00 0.00 0.00 2.10
302 303 1.751351 TCTCATGGAGCTGTCGGTAAG 59.249 52.381 0.00 0.00 0.00 2.34
303 304 1.751351 CTCTCATGGAGCTGTCGGTAA 59.249 52.381 0.00 0.00 35.08 2.85
304 305 1.341089 ACTCTCATGGAGCTGTCGGTA 60.341 52.381 10.15 0.00 45.48 4.02
305 306 0.613292 ACTCTCATGGAGCTGTCGGT 60.613 55.000 10.15 0.00 45.48 4.69
306 307 0.102120 GACTCTCATGGAGCTGTCGG 59.898 60.000 10.15 0.00 45.48 4.79
307 308 0.102120 GGACTCTCATGGAGCTGTCG 59.898 60.000 10.15 0.00 45.48 4.35
308 309 0.102120 CGGACTCTCATGGAGCTGTC 59.898 60.000 10.15 9.25 45.48 3.51
309 310 0.323816 TCGGACTCTCATGGAGCTGT 60.324 55.000 10.15 2.30 45.48 4.40
310 311 1.039068 ATCGGACTCTCATGGAGCTG 58.961 55.000 10.15 8.62 45.48 4.24
311 312 1.686052 GAATCGGACTCTCATGGAGCT 59.314 52.381 10.15 0.00 45.48 4.09
312 313 1.410517 TGAATCGGACTCTCATGGAGC 59.589 52.381 10.15 4.82 45.48 4.70
313 314 3.492309 CCTTGAATCGGACTCTCATGGAG 60.492 52.174 9.01 9.01 46.87 3.86
314 315 2.432146 CCTTGAATCGGACTCTCATGGA 59.568 50.000 10.59 0.00 36.82 3.41
315 316 2.432146 TCCTTGAATCGGACTCTCATGG 59.568 50.000 0.00 10.12 36.30 3.66
316 317 3.808466 TCCTTGAATCGGACTCTCATG 57.192 47.619 0.00 0.00 0.00 3.07
317 318 3.963374 TGATCCTTGAATCGGACTCTCAT 59.037 43.478 0.00 0.00 32.41 2.90
318 319 3.131223 GTGATCCTTGAATCGGACTCTCA 59.869 47.826 0.00 0.00 32.41 3.27
319 320 3.491792 GGTGATCCTTGAATCGGACTCTC 60.492 52.174 0.00 0.00 32.41 3.20
320 321 2.432510 GGTGATCCTTGAATCGGACTCT 59.567 50.000 0.00 0.00 32.41 3.24
321 322 2.432510 AGGTGATCCTTGAATCGGACTC 59.567 50.000 0.00 0.00 42.12 3.36
322 323 2.472029 AGGTGATCCTTGAATCGGACT 58.528 47.619 0.00 0.00 42.12 3.85
323 324 2.990066 AGGTGATCCTTGAATCGGAC 57.010 50.000 0.00 0.00 42.12 4.79
334 335 5.474876 AGAATTCAAGTTCACAAGGTGATCC 59.525 40.000 8.44 0.00 42.40 3.36
335 336 6.566197 AGAATTCAAGTTCACAAGGTGATC 57.434 37.500 8.44 0.00 42.40 2.92
336 337 6.547141 TCAAGAATTCAAGTTCACAAGGTGAT 59.453 34.615 8.44 0.00 42.40 3.06
337 338 5.885352 TCAAGAATTCAAGTTCACAAGGTGA 59.115 36.000 8.44 0.00 41.09 4.02
338 339 6.135290 TCAAGAATTCAAGTTCACAAGGTG 57.865 37.500 8.44 0.00 34.45 4.00
339 340 5.221126 GCTCAAGAATTCAAGTTCACAAGGT 60.221 40.000 8.44 0.00 0.00 3.50
340 341 5.218139 GCTCAAGAATTCAAGTTCACAAGG 58.782 41.667 8.44 0.00 0.00 3.61
341 342 5.218139 GGCTCAAGAATTCAAGTTCACAAG 58.782 41.667 8.44 0.00 0.00 3.16
342 343 4.644234 TGGCTCAAGAATTCAAGTTCACAA 59.356 37.500 8.44 0.00 0.00 3.33
343 344 4.206375 TGGCTCAAGAATTCAAGTTCACA 58.794 39.130 8.44 0.00 0.00 3.58
344 345 4.516698 TCTGGCTCAAGAATTCAAGTTCAC 59.483 41.667 8.44 0.00 0.00 3.18
345 346 4.717877 TCTGGCTCAAGAATTCAAGTTCA 58.282 39.130 8.44 4.89 0.00 3.18
346 347 5.695851 TTCTGGCTCAAGAATTCAAGTTC 57.304 39.130 8.44 0.98 31.19 3.01
347 348 7.667219 TCTTATTCTGGCTCAAGAATTCAAGTT 59.333 33.333 8.44 0.00 42.92 2.66
348 349 7.170965 TCTTATTCTGGCTCAAGAATTCAAGT 58.829 34.615 8.44 0.00 42.92 3.16
349 350 7.621428 TCTTATTCTGGCTCAAGAATTCAAG 57.379 36.000 8.44 11.46 42.92 3.02
350 351 6.094603 GCTCTTATTCTGGCTCAAGAATTCAA 59.905 38.462 8.44 4.68 42.92 2.69
351 352 5.587844 GCTCTTATTCTGGCTCAAGAATTCA 59.412 40.000 8.44 3.48 42.92 2.57
352 353 5.821995 AGCTCTTATTCTGGCTCAAGAATTC 59.178 40.000 12.78 0.00 42.92 2.17
353 354 5.753716 AGCTCTTATTCTGGCTCAAGAATT 58.246 37.500 12.78 0.00 42.92 2.17
354 355 5.370875 AGCTCTTATTCTGGCTCAAGAAT 57.629 39.130 12.36 12.36 46.28 2.40
355 356 4.833478 AGCTCTTATTCTGGCTCAAGAA 57.167 40.909 0.63 0.63 40.36 2.52
361 362 1.686052 CGGAGAGCTCTTATTCTGGCT 59.314 52.381 19.36 0.00 37.77 4.75
362 363 1.270041 CCGGAGAGCTCTTATTCTGGC 60.270 57.143 19.36 1.62 29.96 4.85
363 364 1.270041 GCCGGAGAGCTCTTATTCTGG 60.270 57.143 19.36 19.50 38.79 3.86
364 365 1.410517 TGCCGGAGAGCTCTTATTCTG 59.589 52.381 19.36 10.05 0.00 3.02
365 366 1.781786 TGCCGGAGAGCTCTTATTCT 58.218 50.000 19.36 0.00 0.00 2.40
366 367 2.411904 CATGCCGGAGAGCTCTTATTC 58.588 52.381 19.36 4.78 0.00 1.75
367 368 1.542108 GCATGCCGGAGAGCTCTTATT 60.542 52.381 19.36 0.00 0.00 1.40
368 369 0.034616 GCATGCCGGAGAGCTCTTAT 59.965 55.000 19.36 5.23 0.00 1.73
369 370 1.045350 AGCATGCCGGAGAGCTCTTA 61.045 55.000 19.36 2.96 30.05 2.10
370 371 1.045350 TAGCATGCCGGAGAGCTCTT 61.045 55.000 19.36 0.91 38.47 2.85
371 372 1.456518 TAGCATGCCGGAGAGCTCT 60.457 57.895 18.28 18.28 38.47 4.09
372 373 1.006337 CTAGCATGCCGGAGAGCTC 60.006 63.158 15.66 5.27 38.47 4.09
373 374 3.136750 CTAGCATGCCGGAGAGCT 58.863 61.111 15.66 13.22 40.92 4.09
374 375 2.664518 GCTAGCATGCCGGAGAGC 60.665 66.667 15.66 11.85 0.00 4.09
375 376 1.300775 CTGCTAGCATGCCGGAGAG 60.301 63.158 19.72 5.46 0.00 3.20
376 377 2.817424 CTGCTAGCATGCCGGAGA 59.183 61.111 19.72 0.00 0.00 3.71
377 378 2.971413 GCTGCTAGCATGCCGGAG 60.971 66.667 19.72 17.10 41.89 4.63
378 379 3.451556 GAGCTGCTAGCATGCCGGA 62.452 63.158 25.68 6.33 45.56 5.14
379 380 2.971413 GAGCTGCTAGCATGCCGG 60.971 66.667 25.68 14.04 45.56 6.13
380 381 1.816679 TTGAGCTGCTAGCATGCCG 60.817 57.895 25.68 14.36 45.56 5.69
381 382 1.722636 GGTTGAGCTGCTAGCATGCC 61.723 60.000 25.68 19.69 45.56 4.40
382 383 1.028330 TGGTTGAGCTGCTAGCATGC 61.028 55.000 19.72 22.04 45.56 4.06
383 384 0.731417 GTGGTTGAGCTGCTAGCATG 59.269 55.000 19.72 13.38 45.56 4.06
384 385 0.393537 GGTGGTTGAGCTGCTAGCAT 60.394 55.000 19.72 3.69 45.56 3.79
385 386 1.003355 GGTGGTTGAGCTGCTAGCA 60.003 57.895 18.22 18.22 45.56 3.49
386 387 1.746991 GGGTGGTTGAGCTGCTAGC 60.747 63.158 8.10 8.10 42.84 3.42
387 388 1.078143 GGGGTGGTTGAGCTGCTAG 60.078 63.158 0.15 0.00 0.00 3.42
388 389 1.207488 ATGGGGTGGTTGAGCTGCTA 61.207 55.000 0.15 0.00 0.00 3.49
389 390 2.490270 GATGGGGTGGTTGAGCTGCT 62.490 60.000 0.00 0.00 0.00 4.24
390 391 2.036256 ATGGGGTGGTTGAGCTGC 59.964 61.111 0.00 0.00 0.00 5.25
391 392 0.033796 ATGATGGGGTGGTTGAGCTG 60.034 55.000 0.00 0.00 0.00 4.24
392 393 0.257039 GATGATGGGGTGGTTGAGCT 59.743 55.000 0.00 0.00 0.00 4.09
393 394 1.097547 CGATGATGGGGTGGTTGAGC 61.098 60.000 0.00 0.00 0.00 4.26
394 395 0.253044 ACGATGATGGGGTGGTTGAG 59.747 55.000 0.00 0.00 0.00 3.02
395 396 0.035534 CACGATGATGGGGTGGTTGA 60.036 55.000 0.00 0.00 0.00 3.18
396 397 0.035534 TCACGATGATGGGGTGGTTG 60.036 55.000 0.00 0.00 32.65 3.77
397 398 0.253044 CTCACGATGATGGGGTGGTT 59.747 55.000 0.00 0.00 32.65 3.67
398 399 0.617535 TCTCACGATGATGGGGTGGT 60.618 55.000 0.00 0.00 32.65 4.16
399 400 0.105593 CTCTCACGATGATGGGGTGG 59.894 60.000 0.00 0.00 32.65 4.61
400 401 0.105593 CCTCTCACGATGATGGGGTG 59.894 60.000 0.00 0.00 0.00 4.61
401 402 0.032117 TCCTCTCACGATGATGGGGT 60.032 55.000 0.00 0.00 0.00 4.95
402 403 1.001746 CATCCTCTCACGATGATGGGG 59.998 57.143 0.00 0.00 39.64 4.96
403 404 2.452295 CATCCTCTCACGATGATGGG 57.548 55.000 0.00 0.00 39.64 4.00
405 406 3.740631 TTCCATCCTCTCACGATGATG 57.259 47.619 0.00 0.00 39.64 3.07
406 407 4.760530 TTTTCCATCCTCTCACGATGAT 57.239 40.909 0.00 0.00 39.64 2.45
407 408 4.551702 TTTTTCCATCCTCTCACGATGA 57.448 40.909 0.00 0.00 39.64 2.92
426 427 2.489329 CTGGCAGGATCGTGTCATTTTT 59.511 45.455 21.81 0.00 29.89 1.94
427 428 2.086869 CTGGCAGGATCGTGTCATTTT 58.913 47.619 21.81 0.00 29.89 1.82
428 429 1.679944 CCTGGCAGGATCGTGTCATTT 60.680 52.381 29.96 0.00 37.67 2.32
429 430 0.107508 CCTGGCAGGATCGTGTCATT 60.108 55.000 29.96 0.00 37.67 2.57
430 431 0.977627 TCCTGGCAGGATCGTGTCAT 60.978 55.000 32.01 0.00 40.06 3.06
431 432 1.191489 TTCCTGGCAGGATCGTGTCA 61.191 55.000 35.34 20.51 45.34 3.58
432 433 0.036388 TTTCCTGGCAGGATCGTGTC 60.036 55.000 35.34 12.98 45.34 3.67
433 434 0.036010 CTTTCCTGGCAGGATCGTGT 60.036 55.000 35.34 0.00 45.34 4.49
434 435 1.372087 GCTTTCCTGGCAGGATCGTG 61.372 60.000 35.34 24.06 45.34 4.35
435 436 1.078143 GCTTTCCTGGCAGGATCGT 60.078 57.895 35.34 0.00 45.34 3.73
436 437 2.176273 CGCTTTCCTGGCAGGATCG 61.176 63.158 35.34 30.32 45.34 3.69
437 438 2.476320 GCGCTTTCCTGGCAGGATC 61.476 63.158 35.34 24.40 45.34 3.36
438 439 2.439156 GCGCTTTCCTGGCAGGAT 60.439 61.111 35.34 0.00 45.34 3.24
439 440 4.722700 GGCGCTTTCCTGGCAGGA 62.723 66.667 32.01 32.01 44.10 3.86
441 442 2.753043 ATGGCGCTTTCCTGGCAG 60.753 61.111 7.64 7.75 44.30 4.85
442 443 3.063704 CATGGCGCTTTCCTGGCA 61.064 61.111 7.64 0.00 45.22 4.92
443 444 3.830192 CCATGGCGCTTTCCTGGC 61.830 66.667 7.64 0.00 0.00 4.85
444 445 1.978617 AACCATGGCGCTTTCCTGG 60.979 57.895 13.04 9.84 33.45 4.45
445 446 1.213537 CAACCATGGCGCTTTCCTG 59.786 57.895 13.04 0.00 0.00 3.86
446 447 1.228552 ACAACCATGGCGCTTTCCT 60.229 52.632 13.04 0.00 0.00 3.36
447 448 1.212751 GACAACCATGGCGCTTTCC 59.787 57.895 13.04 0.00 0.00 3.13
448 449 1.212751 GGACAACCATGGCGCTTTC 59.787 57.895 13.04 1.10 34.32 2.62
449 450 2.275380 GGGACAACCATGGCGCTTT 61.275 57.895 13.04 0.00 43.92 3.51
450 451 2.676471 GGGACAACCATGGCGCTT 60.676 61.111 13.04 0.00 43.92 4.68
452 453 3.918253 TCAGGGACAACCATGGCGC 62.918 63.158 13.04 0.00 46.44 6.53
453 454 1.746615 CTCAGGGACAACCATGGCG 60.747 63.158 13.04 5.85 46.44 5.69
454 455 1.379044 CCTCAGGGACAACCATGGC 60.379 63.158 13.04 0.00 46.44 4.40
455 456 2.386864 TCCTCAGGGACAACCATGG 58.613 57.895 11.19 11.19 46.44 3.66
471 472 1.996187 GGAGGGGGAGGAGTTGTCC 60.996 68.421 0.00 0.00 44.33 4.02
472 473 1.996187 GGGAGGGGGAGGAGTTGTC 60.996 68.421 0.00 0.00 0.00 3.18
473 474 2.062448 AAGGGAGGGGGAGGAGTTGT 62.062 60.000 0.00 0.00 0.00 3.32
474 475 1.229984 AAGGGAGGGGGAGGAGTTG 60.230 63.158 0.00 0.00 0.00 3.16
475 476 1.229984 CAAGGGAGGGGGAGGAGTT 60.230 63.158 0.00 0.00 0.00 3.01
476 477 2.456840 CAAGGGAGGGGGAGGAGT 59.543 66.667 0.00 0.00 0.00 3.85
477 478 3.093172 GCAAGGGAGGGGGAGGAG 61.093 72.222 0.00 0.00 0.00 3.69
478 479 4.760220 GGCAAGGGAGGGGGAGGA 62.760 72.222 0.00 0.00 0.00 3.71
479 480 4.767892 AGGCAAGGGAGGGGGAGG 62.768 72.222 0.00 0.00 0.00 4.30
480 481 2.615288 AAGGCAAGGGAGGGGGAG 60.615 66.667 0.00 0.00 0.00 4.30
481 482 2.941025 CAAGGCAAGGGAGGGGGA 60.941 66.667 0.00 0.00 0.00 4.81
482 483 4.066139 CCAAGGCAAGGGAGGGGG 62.066 72.222 0.00 0.00 0.00 5.40
483 484 3.268032 ACCAAGGCAAGGGAGGGG 61.268 66.667 0.27 0.00 0.00 4.79
484 485 2.356667 GACCAAGGCAAGGGAGGG 59.643 66.667 0.27 0.00 0.00 4.30
485 486 1.793820 AAGGACCAAGGCAAGGGAGG 61.794 60.000 0.00 0.00 0.00 4.30
486 487 0.322906 GAAGGACCAAGGCAAGGGAG 60.323 60.000 0.00 0.00 0.00 4.30
487 488 1.767692 GAAGGACCAAGGCAAGGGA 59.232 57.895 0.00 0.00 0.00 4.20
488 489 1.675641 CGAAGGACCAAGGCAAGGG 60.676 63.158 0.00 0.00 0.00 3.95
489 490 2.335712 GCGAAGGACCAAGGCAAGG 61.336 63.158 0.00 0.00 0.00 3.61
490 491 2.335712 GGCGAAGGACCAAGGCAAG 61.336 63.158 0.00 0.00 0.00 4.01
491 492 2.282180 GGCGAAGGACCAAGGCAA 60.282 61.111 0.00 0.00 0.00 4.52
492 493 3.126703 TTGGCGAAGGACCAAGGCA 62.127 57.895 6.12 6.12 42.23 4.75
493 494 2.282180 TTGGCGAAGGACCAAGGC 60.282 61.111 0.00 0.00 42.23 4.35
496 497 2.975799 GCGTTGGCGAAGGACCAA 60.976 61.111 5.27 0.00 44.86 3.67
515 516 2.319096 TTAAGGCAAACGCGGACGG 61.319 57.895 12.47 0.00 46.04 4.79
517 518 1.208358 GGTTAAGGCAAACGCGGAC 59.792 57.895 12.47 0.00 0.00 4.79
518 519 1.967494 GGGTTAAGGCAAACGCGGA 60.967 57.895 12.47 0.00 33.39 5.54
519 520 1.797211 TTGGGTTAAGGCAAACGCGG 61.797 55.000 12.47 0.00 43.23 6.46
520 521 0.662077 GTTGGGTTAAGGCAAACGCG 60.662 55.000 3.53 3.53 43.23 6.01
521 522 0.319211 GGTTGGGTTAAGGCAAACGC 60.319 55.000 11.29 11.29 41.33 4.84
522 523 0.039888 CGGTTGGGTTAAGGCAAACG 60.040 55.000 0.00 0.00 0.00 3.60
523 524 1.001048 GACGGTTGGGTTAAGGCAAAC 60.001 52.381 0.00 0.00 0.00 2.93
524 525 1.320507 GACGGTTGGGTTAAGGCAAA 58.679 50.000 0.00 0.00 0.00 3.68
525 526 0.537828 GGACGGTTGGGTTAAGGCAA 60.538 55.000 0.00 0.00 0.00 4.52
526 527 1.073548 GGACGGTTGGGTTAAGGCA 59.926 57.895 0.00 0.00 0.00 4.75
527 528 0.675837 GAGGACGGTTGGGTTAAGGC 60.676 60.000 0.00 0.00 0.00 4.35
528 529 0.035725 GGAGGACGGTTGGGTTAAGG 60.036 60.000 0.00 0.00 0.00 2.69
529 530 0.390735 CGGAGGACGGTTGGGTTAAG 60.391 60.000 0.00 0.00 39.42 1.85
530 531 1.672898 CGGAGGACGGTTGGGTTAA 59.327 57.895 0.00 0.00 39.42 2.01
531 532 3.379880 CGGAGGACGGTTGGGTTA 58.620 61.111 0.00 0.00 39.42 2.85
544 545 1.266989 GACTGTTGGAAAAAGCCGGAG 59.733 52.381 5.05 0.00 33.19 4.63
545 546 1.133915 AGACTGTTGGAAAAAGCCGGA 60.134 47.619 5.05 0.00 33.19 5.14
546 547 1.318576 AGACTGTTGGAAAAAGCCGG 58.681 50.000 0.00 0.00 33.19 6.13
547 548 2.225727 GGTAGACTGTTGGAAAAAGCCG 59.774 50.000 0.00 0.00 33.19 5.52
548 549 3.487372 AGGTAGACTGTTGGAAAAAGCC 58.513 45.455 0.00 0.00 33.19 4.35
549 550 4.578928 TGAAGGTAGACTGTTGGAAAAAGC 59.421 41.667 0.00 0.00 33.19 3.51
550 551 5.588648 TGTGAAGGTAGACTGTTGGAAAAAG 59.411 40.000 0.00 0.00 37.14 2.27
551 552 5.502079 TGTGAAGGTAGACTGTTGGAAAAA 58.498 37.500 0.00 0.00 0.00 1.94
552 553 5.105567 TGTGAAGGTAGACTGTTGGAAAA 57.894 39.130 0.00 0.00 0.00 2.29
553 554 4.764050 TGTGAAGGTAGACTGTTGGAAA 57.236 40.909 0.00 0.00 0.00 3.13
554 555 4.974645 ATGTGAAGGTAGACTGTTGGAA 57.025 40.909 0.00 0.00 0.00 3.53
555 556 4.974645 AATGTGAAGGTAGACTGTTGGA 57.025 40.909 0.00 0.00 0.00 3.53
556 557 7.504924 TTTAAATGTGAAGGTAGACTGTTGG 57.495 36.000 0.00 0.00 0.00 3.77
557 558 9.233232 GTTTTTAAATGTGAAGGTAGACTGTTG 57.767 33.333 0.00 0.00 0.00 3.33
558 559 8.962679 TGTTTTTAAATGTGAAGGTAGACTGTT 58.037 29.630 0.00 0.00 0.00 3.16
559 560 8.514330 TGTTTTTAAATGTGAAGGTAGACTGT 57.486 30.769 0.00 0.00 0.00 3.55
560 561 9.398170 CATGTTTTTAAATGTGAAGGTAGACTG 57.602 33.333 0.00 0.00 0.00 3.51
561 562 8.576442 CCATGTTTTTAAATGTGAAGGTAGACT 58.424 33.333 0.00 0.00 0.00 3.24
562 563 8.357402 ACCATGTTTTTAAATGTGAAGGTAGAC 58.643 33.333 0.00 0.00 0.00 2.59
563 564 8.472007 ACCATGTTTTTAAATGTGAAGGTAGA 57.528 30.769 0.00 0.00 0.00 2.59
566 567 9.705290 GATAACCATGTTTTTAAATGTGAAGGT 57.295 29.630 0.00 0.00 0.00 3.50
567 568 9.927668 AGATAACCATGTTTTTAAATGTGAAGG 57.072 29.630 0.00 0.00 0.00 3.46
569 570 9.619316 CGAGATAACCATGTTTTTAAATGTGAA 57.381 29.630 0.00 0.00 0.00 3.18
570 571 9.004717 TCGAGATAACCATGTTTTTAAATGTGA 57.995 29.630 0.00 0.00 0.00 3.58
571 572 9.277565 CTCGAGATAACCATGTTTTTAAATGTG 57.722 33.333 6.58 0.00 0.00 3.21
572 573 9.010029 ACTCGAGATAACCATGTTTTTAAATGT 57.990 29.630 21.68 0.00 0.00 2.71
573 574 9.840427 AACTCGAGATAACCATGTTTTTAAATG 57.160 29.630 21.68 0.00 0.00 2.32
578 579 9.673454 GTTTTAACTCGAGATAACCATGTTTTT 57.327 29.630 21.68 0.04 0.00 1.94
579 580 9.063615 AGTTTTAACTCGAGATAACCATGTTTT 57.936 29.630 21.68 0.26 32.86 2.43
580 581 8.617290 AGTTTTAACTCGAGATAACCATGTTT 57.383 30.769 21.68 0.82 32.86 2.83
581 582 8.617290 AAGTTTTAACTCGAGATAACCATGTT 57.383 30.769 21.68 2.58 38.57 2.71
582 583 8.504005 CAAAGTTTTAACTCGAGATAACCATGT 58.496 33.333 21.68 0.70 38.57 3.21
583 584 8.717821 TCAAAGTTTTAACTCGAGATAACCATG 58.282 33.333 21.68 15.87 38.57 3.66
584 585 8.842358 TCAAAGTTTTAACTCGAGATAACCAT 57.158 30.769 21.68 3.23 38.57 3.55
585 586 8.717821 CATCAAAGTTTTAACTCGAGATAACCA 58.282 33.333 21.68 4.48 38.57 3.67
586 587 8.718734 ACATCAAAGTTTTAACTCGAGATAACC 58.281 33.333 21.68 10.81 38.57 2.85
591 592 9.100554 TGTTAACATCAAAGTTTTAACTCGAGA 57.899 29.630 21.68 0.00 38.57 4.04
592 593 9.155053 GTGTTAACATCAAAGTTTTAACTCGAG 57.845 33.333 12.26 11.84 38.57 4.04
593 594 8.666573 TGTGTTAACATCAAAGTTTTAACTCGA 58.333 29.630 12.26 0.00 38.57 4.04
594 595 8.829514 TGTGTTAACATCAAAGTTTTAACTCG 57.170 30.769 12.26 0.00 38.57 4.18
596 597 9.030301 GCATGTGTTAACATCAAAGTTTTAACT 57.970 29.630 12.26 0.00 45.50 2.24
597 598 8.812329 TGCATGTGTTAACATCAAAGTTTTAAC 58.188 29.630 12.26 0.00 45.50 2.01
598 599 8.932945 TGCATGTGTTAACATCAAAGTTTTAA 57.067 26.923 12.26 0.00 45.50 1.52
599 600 8.932945 TTGCATGTGTTAACATCAAAGTTTTA 57.067 26.923 12.26 0.00 45.50 1.52
600 601 7.840342 TTGCATGTGTTAACATCAAAGTTTT 57.160 28.000 12.26 0.00 45.50 2.43
601 602 7.840342 TTTGCATGTGTTAACATCAAAGTTT 57.160 28.000 12.26 0.00 45.50 2.66
602 603 8.436046 AATTTGCATGTGTTAACATCAAAGTT 57.564 26.923 12.26 11.74 45.50 2.66
603 604 7.171337 GGAATTTGCATGTGTTAACATCAAAGT 59.829 33.333 12.26 16.63 45.50 2.66
604 605 7.512297 GGAATTTGCATGTGTTAACATCAAAG 58.488 34.615 12.26 9.66 45.50 2.77
605 606 6.145209 CGGAATTTGCATGTGTTAACATCAAA 59.855 34.615 12.26 17.54 45.50 2.69
606 607 5.632764 CGGAATTTGCATGTGTTAACATCAA 59.367 36.000 12.26 10.69 45.50 2.57
607 608 5.048434 TCGGAATTTGCATGTGTTAACATCA 60.048 36.000 12.26 11.82 45.50 3.07
608 609 5.398169 TCGGAATTTGCATGTGTTAACATC 58.602 37.500 12.26 6.42 45.50 3.06
610 611 4.320861 CCTCGGAATTTGCATGTGTTAACA 60.321 41.667 3.59 3.59 41.58 2.41
611 612 4.165779 CCTCGGAATTTGCATGTGTTAAC 58.834 43.478 0.00 0.00 0.00 2.01
612 613 3.823873 ACCTCGGAATTTGCATGTGTTAA 59.176 39.130 0.00 0.00 0.00 2.01
613 614 3.190327 CACCTCGGAATTTGCATGTGTTA 59.810 43.478 0.00 0.00 0.00 2.41
614 615 2.030007 CACCTCGGAATTTGCATGTGTT 60.030 45.455 0.00 0.00 0.00 3.32
615 616 1.541147 CACCTCGGAATTTGCATGTGT 59.459 47.619 0.00 0.00 0.00 3.72
616 617 1.541147 ACACCTCGGAATTTGCATGTG 59.459 47.619 0.00 0.00 0.00 3.21
617 618 1.909700 ACACCTCGGAATTTGCATGT 58.090 45.000 0.00 0.00 0.00 3.21
684 685 3.640000 CGATCGTGGGCAATCGGC 61.640 66.667 7.03 0.00 40.74 5.54
686 687 2.589492 GCTCGATCGTGGGCAATCG 61.589 63.158 15.94 0.00 44.66 3.34
687 688 2.247437 GGCTCGATCGTGGGCAATC 61.247 63.158 23.34 6.98 0.00 2.67
699 700 0.391597 AGAAACTGAAACGGGCTCGA 59.608 50.000 15.95 0.00 40.11 4.04
1068 1070 1.462238 ATGAGATCCGGGAAGGGGG 60.462 63.158 0.00 0.00 41.52 5.40
1133 1135 3.005472 CGAATCCCAAGAATCTACCGCTA 59.995 47.826 0.00 0.00 0.00 4.26
1139 1141 2.223971 GGCGTCGAATCCCAAGAATCTA 60.224 50.000 0.00 0.00 0.00 1.98
1140 1142 1.473434 GGCGTCGAATCCCAAGAATCT 60.473 52.381 0.00 0.00 0.00 2.40
1207 1209 3.107447 CCAACTAAATCCGGCGCC 58.893 61.111 19.07 19.07 0.00 6.53
1235 1237 1.075659 GCCAAGGGGAAGCAGAAGT 59.924 57.895 0.00 0.00 35.59 3.01
1249 1251 2.840102 CCACCCCCAAAACGCCAA 60.840 61.111 0.00 0.00 0.00 4.52
1260 1262 3.645268 CTAACCAGCAGCCCACCCC 62.645 68.421 0.00 0.00 0.00 4.95
1271 1273 2.766828 ACAGCTAGCTAACCCTAACCAG 59.233 50.000 18.86 2.64 0.00 4.00
1283 1285 1.479709 CCTGGACACTACAGCTAGCT 58.520 55.000 12.68 12.68 34.65 3.32
1292 1294 2.422597 CATTTCAACGCCTGGACACTA 58.577 47.619 0.00 0.00 0.00 2.74
1293 1295 1.238439 CATTTCAACGCCTGGACACT 58.762 50.000 0.00 0.00 0.00 3.55
1296 1298 0.521735 GACCATTTCAACGCCTGGAC 59.478 55.000 0.00 0.00 32.92 4.02
1297 1299 0.608035 GGACCATTTCAACGCCTGGA 60.608 55.000 0.00 0.00 32.92 3.86
1298 1300 1.883021 GGACCATTTCAACGCCTGG 59.117 57.895 0.00 0.00 34.84 4.45
1341 1343 6.201591 ACTGGGCCCAAAATATAATCTTGAA 58.798 36.000 28.29 0.00 0.00 2.69
1342 1344 5.776358 ACTGGGCCCAAAATATAATCTTGA 58.224 37.500 28.29 0.00 0.00 3.02
1361 1363 3.810310 TGGGTTTGTTTGCTTTACTGG 57.190 42.857 0.00 0.00 0.00 4.00
1371 1373 3.812609 GCCAAAAATCGATGGGTTTGTTT 59.187 39.130 19.79 6.11 37.19 2.83
1463 1466 5.290158 CACAAGATGCATCTTTTAACCATGC 59.710 40.000 34.17 2.14 44.28 4.06
1495 1498 8.092068 CCAGGTTGACCAAACGATATATATACA 58.908 37.037 2.56 0.00 39.91 2.29
1496 1499 8.308931 TCCAGGTTGACCAAACGATATATATAC 58.691 37.037 2.56 0.00 39.91 1.47
1497 1500 8.308931 GTCCAGGTTGACCAAACGATATATATA 58.691 37.037 2.56 0.00 39.91 0.86
1498 1501 7.016268 AGTCCAGGTTGACCAAACGATATATAT 59.984 37.037 2.56 0.00 39.91 0.86
1499 1502 6.325545 AGTCCAGGTTGACCAAACGATATATA 59.674 38.462 2.56 0.00 39.91 0.86
1500 1503 5.130477 AGTCCAGGTTGACCAAACGATATAT 59.870 40.000 2.56 0.00 39.91 0.86
1506 1509 1.602377 GAAGTCCAGGTTGACCAAACG 59.398 52.381 2.56 0.00 39.91 3.60
1578 1587 1.064946 CGAAGGCTACAGAGAGGCG 59.935 63.158 0.00 0.00 46.31 5.52
1588 1597 0.536724 TGAGAATGCTGCGAAGGCTA 59.463 50.000 0.00 0.00 40.82 3.93
1766 1777 5.235186 CACTTGTTATCTAAATCAGCTCGGG 59.765 44.000 0.00 0.00 0.00 5.14
1817 1828 9.331282 ACATTTAGTAGCAGAACAAATAGATCC 57.669 33.333 0.00 0.00 0.00 3.36
2088 2099 7.721286 ACTTTGAAAGACACAATCTGACTAG 57.279 36.000 12.53 0.00 37.88 2.57
2107 2118 5.062558 CAGTTGGCTGTTGAAAAGAACTTTG 59.937 40.000 0.45 0.00 37.92 2.77
2254 2267 9.396022 ACCCATTTGTACTACTATGAATGAAAG 57.604 33.333 0.00 0.00 0.00 2.62
2380 2397 6.908870 AAAAGAACTTTCAAAGCCACAATC 57.091 33.333 0.00 0.00 31.45 2.67
2416 2433 2.229792 TGCTCCACCTGTGATTGTTTC 58.770 47.619 0.00 0.00 0.00 2.78
2425 2442 1.066858 CGTAACTGATGCTCCACCTGT 60.067 52.381 0.00 0.00 0.00 4.00
2557 2574 1.625818 AGACGAGGGTGAAATGAAGCT 59.374 47.619 0.00 0.00 0.00 3.74
2597 2615 2.542205 GGTAAACACGGGTCTGCAAAAC 60.542 50.000 0.00 0.00 0.00 2.43
2723 2741 6.211515 GGTAGACGATACATTTACCACGAAT 58.788 40.000 0.00 0.00 35.09 3.34
2898 2916 4.773323 ACAATTGAAGCAAAGTAGAGCC 57.227 40.909 13.59 0.00 0.00 4.70
2909 2927 8.844244 ACTATTCCAGATCATAACAATTGAAGC 58.156 33.333 13.59 0.00 0.00 3.86
2918 2936 8.748412 AGAGAGCATACTATTCCAGATCATAAC 58.252 37.037 0.00 0.00 0.00 1.89
2932 2950 6.791867 ATGTAAACACCAGAGAGCATACTA 57.208 37.500 0.00 0.00 0.00 1.82
2986 3004 2.298163 CCAGCCAAAGTCTGCAATCTTT 59.702 45.455 9.16 9.16 34.74 2.52
3022 3040 2.559668 ACACATCGTCCTTCTTCGGTTA 59.440 45.455 0.00 0.00 0.00 2.85
3037 3055 5.692204 CAGATAATCTAACGTCCCACACATC 59.308 44.000 0.00 0.00 0.00 3.06
3049 3067 4.602340 TTCGGGAGGCAGATAATCTAAC 57.398 45.455 0.00 0.00 0.00 2.34
3067 3085 5.699097 TGAAAAGGAAAGTACCCATTTCG 57.301 39.130 10.66 0.00 38.22 3.46
3097 3115 2.872245 CCACGAATCAGTTGTGACACTT 59.128 45.455 7.20 0.00 34.75 3.16
3165 3183 1.197721 CTCCACTGGACAAATCGCAAC 59.802 52.381 0.00 0.00 0.00 4.17
3197 3215 6.498303 AGCTCCATATGTCTACATGGTAATCA 59.502 38.462 5.85 0.00 42.07 2.57
3290 3308 5.419760 TCATCACGAGTTACCTTCGATAG 57.580 43.478 1.14 0.00 40.36 2.08
3378 3396 5.655974 TGGACAGAAAATATATGCAAGGCAA 59.344 36.000 0.00 0.00 43.62 4.52
3527 3551 3.407698 TGCATACACGAAACCATGAACT 58.592 40.909 0.00 0.00 0.00 3.01
3528 3552 3.822594 TGCATACACGAAACCATGAAC 57.177 42.857 0.00 0.00 0.00 3.18
3630 3654 4.623932 AAGTAGAGTTGCATGGACTGAA 57.376 40.909 0.00 0.00 0.00 3.02
3631 3655 4.382040 GCTAAGTAGAGTTGCATGGACTGA 60.382 45.833 0.00 0.00 0.00 3.41
3632 3656 3.868077 GCTAAGTAGAGTTGCATGGACTG 59.132 47.826 0.00 0.00 0.00 3.51
3634 3658 4.116238 GAGCTAAGTAGAGTTGCATGGAC 58.884 47.826 0.00 0.00 0.00 4.02
3810 3863 7.042456 GCACAGGACATGTCACATAAACTATAG 60.042 40.741 26.47 0.00 41.41 1.31
3812 3865 5.586243 GCACAGGACATGTCACATAAACTAT 59.414 40.000 26.47 0.00 41.41 2.12
3859 3912 2.604462 GCAACAAGCCAGAACAAACAAG 59.396 45.455 0.00 0.00 37.23 3.16
3860 3913 2.028658 TGCAACAAGCCAGAACAAACAA 60.029 40.909 0.00 0.00 44.83 2.83
3906 3960 3.006728 TTGTGGAGGGGTAGGCGG 61.007 66.667 0.00 0.00 0.00 6.13
3921 3975 1.303643 GGGGTGCTCCAGAACCTTG 60.304 63.158 7.20 0.00 43.60 3.61
4175 4229 4.782019 AACATTCACAACACACACTTGT 57.218 36.364 0.00 0.00 35.84 3.16
4284 4338 3.275143 CAATTACAAGGCACCGGATACA 58.725 45.455 9.46 0.00 0.00 2.29
4313 4367 5.806654 TCATTCCGATCACCTGAATGATA 57.193 39.130 16.66 3.74 45.60 2.15
4314 4368 4.694760 TCATTCCGATCACCTGAATGAT 57.305 40.909 16.66 0.00 45.60 2.45
4340 4394 6.573712 AGATTTCTTAATCTGAGAGCCCTT 57.426 37.500 0.00 0.00 46.76 3.95
4367 4421 1.068541 GGTTGAATTGTTCGCTGTCCC 60.069 52.381 0.00 0.00 0.00 4.46
4392 4470 5.705441 AGTTTCTTTCGCTGGATCATTGTAA 59.295 36.000 0.00 0.00 0.00 2.41
4393 4471 5.245531 AGTTTCTTTCGCTGGATCATTGTA 58.754 37.500 0.00 0.00 0.00 2.41
4394 4472 4.074970 AGTTTCTTTCGCTGGATCATTGT 58.925 39.130 0.00 0.00 0.00 2.71
4442 4520 0.751452 CCCCCGCCTCTAGTAAAGAC 59.249 60.000 0.00 0.00 0.00 3.01
4443 4521 1.047034 GCCCCCGCCTCTAGTAAAGA 61.047 60.000 0.00 0.00 0.00 2.52
4444 4522 1.446366 GCCCCCGCCTCTAGTAAAG 59.554 63.158 0.00 0.00 0.00 1.85
4445 4523 2.428925 CGCCCCCGCCTCTAGTAAA 61.429 63.158 0.00 0.00 0.00 2.01
4446 4524 2.836360 CGCCCCCGCCTCTAGTAA 60.836 66.667 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.