Multiple sequence alignment - TraesCS3A01G105600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G105600 chr3A 100.000 4158 0 0 1 4158 69507750 69503593 0.000000e+00 7679.0
1 TraesCS3A01G105600 chr3A 82.443 131 23 0 1755 1885 471278639 471278769 9.450000e-22 115.0
2 TraesCS3A01G105600 chr3A 86.111 72 4 5 3506 3573 688594910 688594841 5.770000e-09 73.1
3 TraesCS3A01G105600 chr3D 91.191 2452 133 33 1109 3528 61311701 61314101 0.000000e+00 3254.0
4 TraesCS3A01G105600 chr3D 80.737 706 47 38 42 692 61310558 61311229 6.290000e-128 468.0
5 TraesCS3A01G105600 chr3D 84.773 440 17 21 690 1110 61311256 61311664 3.010000e-106 396.0
6 TraesCS3A01G105600 chr3D 94.037 218 11 2 3939 4155 168085938 168086154 3.100000e-86 329.0
7 TraesCS3A01G105600 chr3D 80.637 408 48 14 3776 4158 61314244 61314645 1.890000e-73 287.0
8 TraesCS3A01G105600 chr3D 83.969 131 21 0 1755 1885 352613126 352613256 4.360000e-25 126.0
9 TraesCS3A01G105600 chr3B 87.376 2923 176 91 690 3528 97076063 97078876 0.000000e+00 3175.0
10 TraesCS3A01G105600 chr3B 82.004 539 40 28 185 692 97075187 97075699 5.010000e-109 405.0
11 TraesCS3A01G105600 chr3B 85.780 218 22 7 3793 4010 378751158 378751366 5.410000e-54 222.0
12 TraesCS3A01G105600 chr3B 77.778 414 53 18 3776 4158 97079018 97079423 7.000000e-53 219.0
13 TraesCS3A01G105600 chr3B 83.206 131 22 0 1755 1885 451530422 451530552 2.030000e-23 121.0
14 TraesCS3A01G105600 chr5D 91.705 217 18 0 3939 4155 425183303 425183519 6.760000e-78 302.0
15 TraesCS3A01G105600 chr5D 98.630 73 1 0 4086 4158 43950082 43950010 3.370000e-26 130.0
16 TraesCS3A01G105600 chr5D 88.764 89 10 0 3560 3648 123088949 123089037 4.390000e-20 110.0
17 TraesCS3A01G105600 chr7B 86.697 218 20 7 3793 4010 616473080 616473288 2.500000e-57 233.0
18 TraesCS3A01G105600 chr7B 88.333 60 4 2 3517 3573 483892105 483892164 7.460000e-08 69.4
19 TraesCS3A01G105600 chr2D 96.183 131 5 0 4025 4155 233308713 233308843 9.050000e-52 215.0
20 TraesCS3A01G105600 chr2D 89.157 83 9 0 3566 3648 567011181 567011099 2.040000e-18 104.0
21 TraesCS3A01G105600 chr2B 84.862 218 24 6 3793 4010 690338739 690338531 1.170000e-50 211.0
22 TraesCS3A01G105600 chr2B 92.308 52 1 2 3526 3574 312524294 312524243 2.070000e-08 71.3
23 TraesCS3A01G105600 chr6B 89.781 137 11 2 3793 3929 31047679 31047546 5.530000e-39 172.0
24 TraesCS3A01G105600 chr7A 95.000 80 4 0 3566 3645 220901107 220901186 4.360000e-25 126.0
25 TraesCS3A01G105600 chr7A 91.071 56 2 2 3521 3573 675579884 675579829 5.770000e-09 73.1
26 TraesCS3A01G105600 chr6D 95.000 80 4 0 3566 3645 429612866 429612945 4.360000e-25 126.0
27 TraesCS3A01G105600 chr6D 88.372 86 10 0 3566 3651 308586004 308585919 2.040000e-18 104.0
28 TraesCS3A01G105600 chr5B 90.110 91 9 0 3566 3656 136051031 136051121 7.300000e-23 119.0
29 TraesCS3A01G105600 chr5B 89.655 58 3 2 3520 3574 604793918 604793975 2.070000e-08 71.3
30 TraesCS3A01G105600 chr5A 90.110 91 9 0 3566 3656 135547462 135547552 7.300000e-23 119.0
31 TraesCS3A01G105600 chr5A 88.889 90 10 0 3997 4086 416302098 416302187 1.220000e-20 111.0
32 TraesCS3A01G105600 chr4B 90.361 83 8 0 3566 3648 501882235 501882153 4.390000e-20 110.0
33 TraesCS3A01G105600 chr1D 88.750 80 9 0 3566 3645 331544420 331544499 9.510000e-17 99.0
34 TraesCS3A01G105600 chr1B 83.505 97 14 2 1790 1885 612863595 612863690 5.730000e-14 89.8
35 TraesCS3A01G105600 chr2A 90.000 60 3 2 3517 3573 23473005 23473064 1.600000e-09 75.0
36 TraesCS3A01G105600 chr2A 90.909 55 2 2 3522 3573 18596686 18596740 2.070000e-08 71.3
37 TraesCS3A01G105600 chr4D 89.831 59 3 2 3519 3574 76824374 76824432 5.770000e-09 73.1
38 TraesCS3A01G105600 chr6A 90.909 55 2 2 3522 3573 410575763 410575709 2.070000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G105600 chr3A 69503593 69507750 4157 True 7679.000000 7679 100.0000 1 4158 1 chr3A.!!$R1 4157
1 TraesCS3A01G105600 chr3D 61310558 61314645 4087 False 1101.250000 3254 84.3345 42 4158 4 chr3D.!!$F3 4116
2 TraesCS3A01G105600 chr3B 97075187 97079423 4236 False 1266.333333 3175 82.3860 185 4158 3 chr3B.!!$F3 3973

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 447 0.179150 GAGCGCGCTCCTATCCTATG 60.179 60.000 43.49 0.0 37.11 2.23 F
1900 2481 0.524862 GGTACGAACCGCTCTTCTCA 59.475 55.000 0.00 0.0 35.62 3.27 F
1902 2483 0.809385 TACGAACCGCTCTTCTCAGG 59.191 55.000 0.00 0.0 0.00 3.86 F
2953 3550 1.225475 GTCGTCGTCATGCTTTGCG 60.225 57.895 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2216 2797 0.042731 TGGAGGAGGACAGGTAAGGG 59.957 60.0 0.0 0.0 0.00 3.95 R
2959 3556 0.321653 AGGTGGAGAACGACAATGGC 60.322 55.0 0.0 0.0 0.00 4.40 R
3022 3619 0.461961 AGCTCATGTAGTTCGGCCTC 59.538 55.0 0.0 0.0 0.00 4.70 R
4040 4697 0.031585 CATCTGCGGGGCATCAATTG 59.968 55.0 0.0 0.0 38.13 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.031919 AGCGATTGACCCGTTGCA 59.968 55.556 0.00 0.00 0.00 4.08
18 19 1.377202 AGCGATTGACCCGTTGCAT 60.377 52.632 0.00 0.00 0.00 3.96
19 20 1.062525 GCGATTGACCCGTTGCATC 59.937 57.895 0.00 0.00 0.00 3.91
20 21 1.721487 CGATTGACCCGTTGCATCC 59.279 57.895 0.00 0.00 0.00 3.51
21 22 1.024046 CGATTGACCCGTTGCATCCA 61.024 55.000 0.00 0.00 0.00 3.41
22 23 1.173043 GATTGACCCGTTGCATCCAA 58.827 50.000 0.00 0.00 0.00 3.53
23 24 1.543802 GATTGACCCGTTGCATCCAAA 59.456 47.619 0.00 0.00 31.68 3.28
24 25 0.671251 TTGACCCGTTGCATCCAAAC 59.329 50.000 0.00 0.00 31.68 2.93
25 26 1.175983 TGACCCGTTGCATCCAAACC 61.176 55.000 0.00 0.00 31.68 3.27
26 27 1.873270 GACCCGTTGCATCCAAACCC 61.873 60.000 0.00 0.00 31.68 4.11
27 28 1.905843 CCCGTTGCATCCAAACCCA 60.906 57.895 0.00 0.00 31.68 4.51
28 29 1.586028 CCGTTGCATCCAAACCCAG 59.414 57.895 0.00 0.00 31.68 4.45
29 30 1.586028 CGTTGCATCCAAACCCAGG 59.414 57.895 0.00 0.00 31.68 4.45
30 31 0.893270 CGTTGCATCCAAACCCAGGA 60.893 55.000 0.00 0.00 39.97 3.86
31 32 0.890683 GTTGCATCCAAACCCAGGAG 59.109 55.000 0.00 0.00 38.83 3.69
32 33 0.251742 TTGCATCCAAACCCAGGAGG 60.252 55.000 0.00 0.00 38.83 4.30
33 34 1.139498 TGCATCCAAACCCAGGAGGA 61.139 55.000 0.00 0.00 39.20 3.71
34 35 0.681243 GCATCCAAACCCAGGAGGAC 60.681 60.000 0.00 0.00 39.20 3.85
35 36 0.392998 CATCCAAACCCAGGAGGACG 60.393 60.000 0.00 0.00 39.20 4.79
36 37 1.562672 ATCCAAACCCAGGAGGACGG 61.563 60.000 0.00 0.00 38.83 4.79
37 38 2.221299 CCAAACCCAGGAGGACGGA 61.221 63.158 0.00 0.00 39.89 4.69
38 39 1.296715 CAAACCCAGGAGGACGGAG 59.703 63.158 0.00 0.00 39.89 4.63
39 40 1.918800 AAACCCAGGAGGACGGAGG 60.919 63.158 0.00 0.00 39.89 4.30
45 46 4.821589 GGAGGACGGAGGCGCAAG 62.822 72.222 10.83 0.00 43.44 4.01
79 80 4.081030 CGCTGCGCAAGACCACTG 62.081 66.667 13.05 0.00 43.02 3.66
80 81 2.974698 GCTGCGCAAGACCACTGT 60.975 61.111 13.05 0.00 43.02 3.55
81 82 1.667830 GCTGCGCAAGACCACTGTA 60.668 57.895 13.05 0.00 43.02 2.74
131 155 2.542907 CGAAACGCAAGCCAGTGGT 61.543 57.895 11.74 0.00 45.62 4.16
135 159 3.730761 CGCAAGCCAGTGGTCAGC 61.731 66.667 11.74 11.05 0.00 4.26
138 162 3.560251 AAGCCAGTGGTCAGCCGT 61.560 61.111 11.74 0.00 37.67 5.68
192 226 2.954611 GGTGCCGGTGCTTTTCTC 59.045 61.111 1.90 0.00 38.71 2.87
210 244 1.891811 CTCTCTTGCACTCACTCTCCA 59.108 52.381 0.00 0.00 0.00 3.86
211 245 2.496871 CTCTCTTGCACTCACTCTCCAT 59.503 50.000 0.00 0.00 0.00 3.41
212 246 2.495270 TCTCTTGCACTCACTCTCCATC 59.505 50.000 0.00 0.00 0.00 3.51
213 247 2.496871 CTCTTGCACTCACTCTCCATCT 59.503 50.000 0.00 0.00 0.00 2.90
214 248 2.495270 TCTTGCACTCACTCTCCATCTC 59.505 50.000 0.00 0.00 0.00 2.75
215 249 2.228545 TGCACTCACTCTCCATCTCT 57.771 50.000 0.00 0.00 0.00 3.10
216 250 2.098614 TGCACTCACTCTCCATCTCTC 58.901 52.381 0.00 0.00 0.00 3.20
217 251 2.291475 TGCACTCACTCTCCATCTCTCT 60.291 50.000 0.00 0.00 0.00 3.10
218 252 2.358898 GCACTCACTCTCCATCTCTCTC 59.641 54.545 0.00 0.00 0.00 3.20
219 253 3.889815 CACTCACTCTCCATCTCTCTCT 58.110 50.000 0.00 0.00 0.00 3.10
220 254 3.879295 CACTCACTCTCCATCTCTCTCTC 59.121 52.174 0.00 0.00 0.00 3.20
221 255 3.117888 ACTCACTCTCCATCTCTCTCTCC 60.118 52.174 0.00 0.00 0.00 3.71
222 256 2.174639 TCACTCTCCATCTCTCTCTCCC 59.825 54.545 0.00 0.00 0.00 4.30
223 257 2.175499 CACTCTCCATCTCTCTCTCCCT 59.825 54.545 0.00 0.00 0.00 4.20
385 445 3.669686 GAGCGCGCTCCTATCCTA 58.330 61.111 43.49 0.00 37.11 2.94
386 446 2.185238 GAGCGCGCTCCTATCCTAT 58.815 57.895 43.49 16.22 37.11 2.57
387 447 0.179150 GAGCGCGCTCCTATCCTATG 60.179 60.000 43.49 0.00 37.11 2.23
419 491 3.513662 ACAACAGCAACGGGTTAAAAAC 58.486 40.909 0.00 0.00 0.00 2.43
428 500 1.286570 GGTTAAAAACACGGCCCCG 59.713 57.895 4.96 4.96 46.03 5.73
462 534 1.502163 GAGGCGAGAATCCAATGCGG 61.502 60.000 0.00 0.00 0.00 5.69
463 535 2.329339 GCGAGAATCCAATGCGGC 59.671 61.111 0.00 0.00 33.14 6.53
464 536 2.628106 CGAGAATCCAATGCGGCG 59.372 61.111 0.51 0.51 33.14 6.46
467 539 4.612536 GAATCCAATGCGGCGCGG 62.613 66.667 28.09 22.00 33.14 6.46
496 568 2.543687 AAGCGACTGACGGATGGACG 62.544 60.000 1.32 0.00 42.83 4.79
536 609 9.687210 AGAAAATCTTTTATTACCGTCCAAAAC 57.313 29.630 0.00 0.00 0.00 2.43
551 624 3.134458 CCAAAACTCGCATAGGATCCTC 58.866 50.000 20.22 2.73 0.00 3.71
554 627 2.390225 ACTCGCATAGGATCCTCCTT 57.610 50.000 20.22 1.18 46.91 3.36
608 681 6.983474 TTTTTCTTTGCTTCTCCTTTTTGG 57.017 33.333 0.00 0.00 37.10 3.28
613 689 1.332195 GCTTCTCCTTTTTGGCCAGT 58.668 50.000 5.11 0.00 35.26 4.00
617 693 4.806286 GCTTCTCCTTTTTGGCCAGTAGTA 60.806 45.833 5.11 0.00 35.26 1.82
618 694 4.281898 TCTCCTTTTTGGCCAGTAGTAC 57.718 45.455 5.11 0.00 35.26 2.73
619 695 3.649023 TCTCCTTTTTGGCCAGTAGTACA 59.351 43.478 5.11 0.00 35.26 2.90
650 726 6.486657 CAGTTTCTTTCCTGGTGATTAGTGAA 59.513 38.462 0.00 0.00 0.00 3.18
651 727 7.175641 CAGTTTCTTTCCTGGTGATTAGTGAAT 59.824 37.037 0.00 0.00 0.00 2.57
654 730 5.250543 TCTTTCCTGGTGATTAGTGAATGGA 59.749 40.000 0.00 0.00 0.00 3.41
656 732 4.104086 TCCTGGTGATTAGTGAATGGAGT 58.896 43.478 0.00 0.00 0.00 3.85
657 733 4.080919 TCCTGGTGATTAGTGAATGGAGTG 60.081 45.833 0.00 0.00 0.00 3.51
658 734 4.080919 CCTGGTGATTAGTGAATGGAGTGA 60.081 45.833 0.00 0.00 0.00 3.41
659 735 5.089970 TGGTGATTAGTGAATGGAGTGAG 57.910 43.478 0.00 0.00 0.00 3.51
660 736 3.873952 GGTGATTAGTGAATGGAGTGAGC 59.126 47.826 0.00 0.00 0.00 4.26
769 1218 6.407299 CCTCCATTTCGAATTTCAAATCCCAT 60.407 38.462 0.00 0.00 0.00 4.00
869 1320 3.261216 CACGCAGTCGCACACACA 61.261 61.111 0.00 0.00 41.61 3.72
870 1321 3.261951 ACGCAGTCGCACACACAC 61.262 61.111 0.00 0.00 29.74 3.82
878 1329 2.885676 CGCACACACACCTGTCTGC 61.886 63.158 0.00 0.00 38.56 4.26
881 1332 0.882042 CACACACACCTGTCTGCTCC 60.882 60.000 0.00 0.00 0.00 4.70
885 1336 3.699894 CACCTGTCTGCTCCGCCT 61.700 66.667 0.00 0.00 0.00 5.52
910 1379 3.707640 CTCTCGGCCTCCTCTCCGT 62.708 68.421 0.00 0.00 45.44 4.69
973 1442 3.288290 GCCGCCGCTCTAGCTCTA 61.288 66.667 0.00 0.00 39.32 2.43
974 1443 2.950673 CCGCCGCTCTAGCTCTAG 59.049 66.667 0.00 0.00 39.32 2.43
976 1445 1.281353 CGCCGCTCTAGCTCTAGTG 59.719 63.158 0.00 0.00 39.32 2.74
977 1446 1.007849 GCCGCTCTAGCTCTAGTGC 60.008 63.158 16.67 16.67 44.61 4.40
980 1449 1.021202 CGCTCTAGCTCTAGTGCTGT 58.979 55.000 25.70 6.66 45.38 4.40
981 1450 1.403679 CGCTCTAGCTCTAGTGCTGTT 59.596 52.381 25.70 5.98 45.38 3.16
982 1451 2.540769 CGCTCTAGCTCTAGTGCTGTTC 60.541 54.545 25.70 12.68 45.38 3.18
983 1452 2.687935 GCTCTAGCTCTAGTGCTGTTCT 59.312 50.000 25.70 5.29 44.63 3.01
984 1453 3.130340 GCTCTAGCTCTAGTGCTGTTCTT 59.870 47.826 25.70 4.61 44.63 2.52
985 1454 4.671377 CTCTAGCTCTAGTGCTGTTCTTG 58.329 47.826 25.70 10.87 43.87 3.02
987 1456 1.082690 GCTCTAGTGCTGTTCTTGGC 58.917 55.000 9.52 0.00 0.00 4.52
1066 1535 3.313874 CCGACAGGGAGGATTGCT 58.686 61.111 0.00 0.00 38.47 3.91
1119 1644 5.055812 GCTCTCTCCATCGATTCTTGATTT 58.944 41.667 0.00 0.00 0.00 2.17
1160 1686 4.207019 CGTTTCACAGTTGATTTTCTTGGC 59.793 41.667 0.00 0.00 0.00 4.52
1200 1726 2.171003 CTTGAGGTCATGTTTTCCCCC 58.829 52.381 0.00 0.00 0.00 5.40
1227 1762 9.757227 AAATAGAAGAAAGAGAGATGATTACCG 57.243 33.333 0.00 0.00 0.00 4.02
1244 1779 2.779506 ACCGAGATTGGTTTCCTCAAC 58.220 47.619 0.00 0.00 39.99 3.18
1256 1791 3.411517 CTCAACCCCATCCCGGCT 61.412 66.667 0.00 0.00 0.00 5.52
1266 1801 1.133792 CCATCCCGGCTAAAATCCACT 60.134 52.381 0.00 0.00 0.00 4.00
1270 1805 1.017387 CCGGCTAAAATCCACTGCTC 58.983 55.000 0.00 0.00 0.00 4.26
1274 1809 3.426695 CGGCTAAAATCCACTGCTCAAAG 60.427 47.826 0.00 0.00 0.00 2.77
1275 1810 3.505836 GCTAAAATCCACTGCTCAAAGC 58.494 45.455 0.00 0.00 42.82 3.51
1312 1847 4.436584 CCACGCAATGTCTCTTTCATTCTC 60.437 45.833 0.00 0.00 33.92 2.87
1340 1875 4.454847 ACATGTCTCTCAAGATGCAAACAG 59.545 41.667 0.00 0.00 33.08 3.16
1382 1917 6.072452 CCCCTTGACTTGATTGTACTTTCTTC 60.072 42.308 0.00 0.00 0.00 2.87
1401 1936 2.942710 TCGCTGCTTCACAAGTACTAC 58.057 47.619 0.00 0.00 0.00 2.73
1403 1938 3.754850 TCGCTGCTTCACAAGTACTACTA 59.245 43.478 0.00 0.00 0.00 1.82
1471 2007 4.242336 AGGCTTCTTTTAATCTCCTGGG 57.758 45.455 0.00 0.00 0.00 4.45
1472 2008 3.593780 AGGCTTCTTTTAATCTCCTGGGT 59.406 43.478 0.00 0.00 0.00 4.51
1473 2009 3.948473 GGCTTCTTTTAATCTCCTGGGTC 59.052 47.826 0.00 0.00 0.00 4.46
1474 2010 4.324641 GGCTTCTTTTAATCTCCTGGGTCT 60.325 45.833 0.00 0.00 0.00 3.85
1475 2011 4.637977 GCTTCTTTTAATCTCCTGGGTCTG 59.362 45.833 0.00 0.00 0.00 3.51
1476 2012 4.844349 TCTTTTAATCTCCTGGGTCTGG 57.156 45.455 0.00 0.00 0.00 3.86
1482 2018 1.080354 CTCCTGGGTCTGGGTGGTA 59.920 63.158 0.00 0.00 0.00 3.25
1492 2028 3.433740 GGTCTGGGTGGTAAATCTCATCC 60.434 52.174 0.00 0.00 34.84 3.51
1507 2064 2.744202 CTCATCCCAAAGTTTCTCGTGG 59.256 50.000 0.00 0.00 0.00 4.94
1515 2072 4.739716 CCAAAGTTTCTCGTGGTTTTCATG 59.260 41.667 0.00 0.00 0.00 3.07
1569 2126 1.893808 CCGGCATCCCCTGATTTCG 60.894 63.158 0.00 0.00 0.00 3.46
1573 2136 0.749454 GCATCCCCTGATTTCGCTGT 60.749 55.000 0.00 0.00 0.00 4.40
1605 2168 2.032681 AAGCTGCTGGTTCCGTCC 59.967 61.111 1.35 0.00 0.00 4.79
1640 2203 2.045926 CAAGGGCCGGAAGTGGAG 60.046 66.667 5.05 0.00 0.00 3.86
1746 2309 4.539881 GACGACGCCTCCTCGCTC 62.540 72.222 0.00 0.00 34.34 5.03
1863 2426 2.592861 GCCATCCGCATCCAGACC 60.593 66.667 0.00 0.00 37.47 3.85
1872 2435 4.162690 ATCCAGACCGCCTTCCGC 62.163 66.667 0.00 0.00 35.03 5.54
1900 2481 0.524862 GGTACGAACCGCTCTTCTCA 59.475 55.000 0.00 0.00 35.62 3.27
1902 2483 0.809385 TACGAACCGCTCTTCTCAGG 59.191 55.000 0.00 0.00 0.00 3.86
1904 2485 1.448717 GAACCGCTCTTCTCAGGCC 60.449 63.158 0.00 0.00 0.00 5.19
2216 2797 1.521141 GGGAAGCCGAGGTTACCTC 59.479 63.158 20.76 20.76 46.44 3.85
2370 2960 2.206576 ACTTTCAGGAAGGATGGTGC 57.793 50.000 0.00 0.00 39.79 5.01
2505 3095 6.623486 CAATGTATGAACCAATTCTCTGCAA 58.377 36.000 0.00 0.00 35.69 4.08
2508 3098 6.003326 TGTATGAACCAATTCTCTGCAAGAA 58.997 36.000 11.88 11.88 46.34 2.52
2519 3116 4.825422 TCTCTGCAAGAATTCCACTACTG 58.175 43.478 0.65 0.00 46.34 2.74
2569 3166 1.609208 TTTCTCTTCTGCAGCAACCC 58.391 50.000 9.47 0.00 0.00 4.11
2778 3375 3.479269 CGCCTTCGGTGTTCTCGC 61.479 66.667 0.00 0.00 0.00 5.03
2920 3517 2.661866 ACCGAGCTGCACAACGAC 60.662 61.111 1.02 0.00 0.00 4.34
2953 3550 1.225475 GTCGTCGTCATGCTTTGCG 60.225 57.895 0.00 0.00 0.00 4.85
2956 3553 1.225475 GTCGTCATGCTTTGCGTCG 60.225 57.895 0.00 0.00 0.00 5.12
2959 3556 1.225475 GTCATGCTTTGCGTCGACG 60.225 57.895 32.57 32.57 43.27 5.12
3001 3598 2.760374 CTCACACCAGAGAAGACCAAC 58.240 52.381 0.00 0.00 37.87 3.77
3002 3599 2.103094 CTCACACCAGAGAAGACCAACA 59.897 50.000 0.00 0.00 37.87 3.33
3003 3600 2.503765 TCACACCAGAGAAGACCAACAA 59.496 45.455 0.00 0.00 0.00 2.83
3116 3713 2.032204 GCATCGAAGCAGTTGGATGATC 60.032 50.000 7.93 0.00 46.53 2.92
3127 3724 1.278302 TGGATGATCGGAAAGCCCCA 61.278 55.000 0.00 0.00 0.00 4.96
3171 3768 1.154980 CGTAAACGCACGGTGTTCG 60.155 57.895 10.24 8.22 45.88 3.95
3206 3804 5.416952 GGAAGAGATGAAGAGCCAATTTTCA 59.583 40.000 0.00 0.00 35.52 2.69
3267 3869 2.345876 TCTTGAGTGTGTGTGTGTGTG 58.654 47.619 0.00 0.00 0.00 3.82
3268 3870 2.076100 CTTGAGTGTGTGTGTGTGTGT 58.924 47.619 0.00 0.00 0.00 3.72
3269 3871 1.437625 TGAGTGTGTGTGTGTGTGTG 58.562 50.000 0.00 0.00 0.00 3.82
3270 3872 1.270571 TGAGTGTGTGTGTGTGTGTGT 60.271 47.619 0.00 0.00 0.00 3.72
3346 3948 0.040058 AGCCCTCATTGTCATTGGCA 59.960 50.000 0.00 0.00 41.33 4.92
3349 3951 1.475280 CCCTCATTGTCATTGGCAGTG 59.525 52.381 7.39 7.39 0.00 3.66
3359 3963 4.275689 TGTCATTGGCAGTGTCTTTGTAAG 59.724 41.667 9.95 0.00 0.00 2.34
3365 3969 5.865085 TGGCAGTGTCTTTGTAAGATAGTT 58.135 37.500 0.00 0.00 40.18 2.24
3366 3970 5.932303 TGGCAGTGTCTTTGTAAGATAGTTC 59.068 40.000 0.00 0.00 40.18 3.01
3369 3973 7.173390 GGCAGTGTCTTTGTAAGATAGTTCTTT 59.827 37.037 0.00 0.00 42.29 2.52
3370 3974 8.012241 GCAGTGTCTTTGTAAGATAGTTCTTTG 58.988 37.037 0.00 0.00 42.29 2.77
3371 3975 9.261180 CAGTGTCTTTGTAAGATAGTTCTTTGA 57.739 33.333 0.00 0.00 42.29 2.69
3373 3977 9.262358 GTGTCTTTGTAAGATAGTTCTTTGACT 57.738 33.333 0.00 0.00 42.29 3.41
3374 3978 9.261180 TGTCTTTGTAAGATAGTTCTTTGACTG 57.739 33.333 0.00 0.00 42.29 3.51
3375 3979 9.477484 GTCTTTGTAAGATAGTTCTTTGACTGA 57.523 33.333 0.00 0.00 42.29 3.41
3376 3980 9.698309 TCTTTGTAAGATAGTTCTTTGACTGAG 57.302 33.333 0.00 0.00 42.29 3.35
3377 3981 9.698309 CTTTGTAAGATAGTTCTTTGACTGAGA 57.302 33.333 0.00 0.00 42.29 3.27
3410 4014 5.766150 TGTGTGGATTTTGTTAGTTCAGG 57.234 39.130 0.00 0.00 0.00 3.86
3430 4034 6.530120 TCAGGCTGTGAAAATTGTTACTAGA 58.470 36.000 15.27 0.00 29.64 2.43
3446 4050 8.582657 TGTTACTAGATGTTCTTAGCTTCTCT 57.417 34.615 0.00 0.00 0.00 3.10
3447 4051 8.679100 TGTTACTAGATGTTCTTAGCTTCTCTC 58.321 37.037 0.00 0.00 0.00 3.20
3448 4052 8.679100 GTTACTAGATGTTCTTAGCTTCTCTCA 58.321 37.037 0.00 0.00 0.00 3.27
3449 4053 7.896383 ACTAGATGTTCTTAGCTTCTCTCAT 57.104 36.000 0.00 0.00 0.00 2.90
3450 4054 7.715657 ACTAGATGTTCTTAGCTTCTCTCATG 58.284 38.462 0.00 0.00 0.00 3.07
3455 4059 5.221722 TGTTCTTAGCTTCTCTCATGGTTGT 60.222 40.000 0.00 0.00 0.00 3.32
3458 4062 5.934625 TCTTAGCTTCTCTCATGGTTGTTTC 59.065 40.000 0.00 0.00 0.00 2.78
3459 4063 3.416156 AGCTTCTCTCATGGTTGTTTCC 58.584 45.455 0.00 0.00 0.00 3.13
3465 4069 3.270027 TCTCATGGTTGTTTCCGCTATG 58.730 45.455 0.00 0.00 0.00 2.23
3466 4070 3.055458 TCTCATGGTTGTTTCCGCTATGA 60.055 43.478 0.00 0.00 0.00 2.15
3470 4074 2.746904 TGGTTGTTTCCGCTATGATGTG 59.253 45.455 0.00 0.00 0.00 3.21
3493 4097 2.031333 CCTCAAACAAGCTCAAGTCAGC 60.031 50.000 0.00 0.00 39.99 4.26
3497 4101 0.948141 ACAAGCTCAAGTCAGCGCTC 60.948 55.000 7.13 0.00 44.82 5.03
3498 4102 0.669932 CAAGCTCAAGTCAGCGCTCT 60.670 55.000 7.13 0.00 44.82 4.09
3515 4119 4.091220 GCGCTCTATGCTGAAATATCTCAC 59.909 45.833 0.00 0.00 40.11 3.51
3520 4124 8.034215 GCTCTATGCTGAAATATCTCACTACAT 58.966 37.037 0.00 0.00 38.95 2.29
3528 4132 8.662781 TGAAATATCTCACTACATGTTTAGGC 57.337 34.615 2.30 0.00 0.00 3.93
3531 4135 4.737855 TCTCACTACATGTTTAGGCCTC 57.262 45.455 9.68 0.00 0.00 4.70
3535 4139 4.288626 TCACTACATGTTTAGGCCTCCTTT 59.711 41.667 9.68 0.00 34.61 3.11
3536 4140 4.396166 CACTACATGTTTAGGCCTCCTTTG 59.604 45.833 9.68 4.68 34.61 2.77
3537 4141 2.807676 ACATGTTTAGGCCTCCTTTGG 58.192 47.619 9.68 0.00 34.61 3.28
3538 4142 2.110011 ACATGTTTAGGCCTCCTTTGGT 59.890 45.455 9.68 0.00 34.61 3.67
3539 4143 3.165071 CATGTTTAGGCCTCCTTTGGTT 58.835 45.455 9.68 0.00 34.61 3.67
3540 4144 3.322191 TGTTTAGGCCTCCTTTGGTTT 57.678 42.857 9.68 0.00 34.61 3.27
3541 4145 4.456662 TGTTTAGGCCTCCTTTGGTTTA 57.543 40.909 9.68 0.00 34.61 2.01
3542 4146 4.403734 TGTTTAGGCCTCCTTTGGTTTAG 58.596 43.478 9.68 0.00 34.61 1.85
3543 4147 4.105057 TGTTTAGGCCTCCTTTGGTTTAGA 59.895 41.667 9.68 0.00 34.61 2.10
3544 4148 4.569719 TTAGGCCTCCTTTGGTTTAGAG 57.430 45.455 9.68 0.00 34.61 2.43
3574 4178 7.817418 TTTTAGGAATTCGGGATAGGATTTG 57.183 36.000 0.00 0.00 0.00 2.32
3575 4179 6.757173 TTAGGAATTCGGGATAGGATTTGA 57.243 37.500 0.00 0.00 0.00 2.69
3576 4180 5.234466 AGGAATTCGGGATAGGATTTGAG 57.766 43.478 0.00 0.00 0.00 3.02
3577 4181 4.907875 AGGAATTCGGGATAGGATTTGAGA 59.092 41.667 0.00 0.00 0.00 3.27
3578 4182 5.549619 AGGAATTCGGGATAGGATTTGAGAT 59.450 40.000 0.00 0.00 0.00 2.75
3579 4183 6.730977 AGGAATTCGGGATAGGATTTGAGATA 59.269 38.462 0.00 0.00 0.00 1.98
3580 4184 6.819146 GGAATTCGGGATAGGATTTGAGATAC 59.181 42.308 0.00 0.00 0.00 2.24
3581 4185 6.935240 ATTCGGGATAGGATTTGAGATACA 57.065 37.500 0.00 0.00 0.00 2.29
3582 4186 6.935240 TTCGGGATAGGATTTGAGATACAT 57.065 37.500 0.00 0.00 0.00 2.29
3583 4187 6.286240 TCGGGATAGGATTTGAGATACATG 57.714 41.667 0.00 0.00 0.00 3.21
3584 4188 5.780282 TCGGGATAGGATTTGAGATACATGT 59.220 40.000 2.69 2.69 0.00 3.21
3585 4189 6.071334 TCGGGATAGGATTTGAGATACATGTC 60.071 42.308 0.00 0.00 0.00 3.06
3586 4190 6.295292 CGGGATAGGATTTGAGATACATGTCA 60.295 42.308 0.00 0.00 0.00 3.58
3587 4191 7.580302 CGGGATAGGATTTGAGATACATGTCAT 60.580 40.741 0.00 0.00 29.66 3.06
3588 4192 7.768120 GGGATAGGATTTGAGATACATGTCATC 59.232 40.741 0.00 4.47 29.66 2.92
3589 4193 8.538701 GGATAGGATTTGAGATACATGTCATCT 58.461 37.037 0.00 9.42 35.43 2.90
3590 4194 9.585099 GATAGGATTTGAGATACATGTCATCTC 57.415 37.037 24.04 24.04 45.76 2.75
3597 4201 6.403866 GAGATACATGTCATCTCACTTCCT 57.596 41.667 24.95 5.46 45.17 3.36
3598 4202 7.517614 GAGATACATGTCATCTCACTTCCTA 57.482 40.000 24.95 0.62 45.17 2.94
3599 4203 8.121305 GAGATACATGTCATCTCACTTCCTAT 57.879 38.462 24.95 4.69 45.17 2.57
3600 4204 7.894708 AGATACATGTCATCTCACTTCCTATG 58.105 38.462 0.00 0.00 0.00 2.23
3601 4205 7.727634 AGATACATGTCATCTCACTTCCTATGA 59.272 37.037 0.00 0.00 0.00 2.15
3602 4206 5.911752 ACATGTCATCTCACTTCCTATGAC 58.088 41.667 7.23 7.23 45.40 3.06
3603 4207 5.660417 ACATGTCATCTCACTTCCTATGACT 59.340 40.000 13.59 0.19 45.40 3.41
3604 4208 6.155910 ACATGTCATCTCACTTCCTATGACTT 59.844 38.462 13.59 6.42 45.40 3.01
3605 4209 6.611613 TGTCATCTCACTTCCTATGACTTT 57.388 37.500 13.59 0.00 45.40 2.66
3606 4210 6.634805 TGTCATCTCACTTCCTATGACTTTC 58.365 40.000 13.59 0.00 45.40 2.62
3607 4211 6.045955 GTCATCTCACTTCCTATGACTTTCC 58.954 44.000 0.00 0.00 43.07 3.13
3608 4212 5.960811 TCATCTCACTTCCTATGACTTTCCT 59.039 40.000 0.00 0.00 0.00 3.36
3609 4213 7.068839 GTCATCTCACTTCCTATGACTTTCCTA 59.931 40.741 0.00 0.00 43.07 2.94
3610 4214 7.786943 TCATCTCACTTCCTATGACTTTCCTAT 59.213 37.037 0.00 0.00 0.00 2.57
3611 4215 7.979786 TCTCACTTCCTATGACTTTCCTATT 57.020 36.000 0.00 0.00 0.00 1.73
3612 4216 8.012957 TCTCACTTCCTATGACTTTCCTATTC 57.987 38.462 0.00 0.00 0.00 1.75
3613 4217 7.841729 TCTCACTTCCTATGACTTTCCTATTCT 59.158 37.037 0.00 0.00 0.00 2.40
3614 4218 8.380742 TCACTTCCTATGACTTTCCTATTCTT 57.619 34.615 0.00 0.00 0.00 2.52
3615 4219 9.488762 TCACTTCCTATGACTTTCCTATTCTTA 57.511 33.333 0.00 0.00 0.00 2.10
3625 4229 9.218525 TGACTTTCCTATTCTTATGATTCTCCT 57.781 33.333 0.00 0.00 0.00 3.69
3628 4232 9.936759 CTTTCCTATTCTTATGATTCTCCTACC 57.063 37.037 0.00 0.00 0.00 3.18
3629 4233 8.437274 TTCCTATTCTTATGATTCTCCTACCC 57.563 38.462 0.00 0.00 0.00 3.69
3630 4234 7.780822 TCCTATTCTTATGATTCTCCTACCCT 58.219 38.462 0.00 0.00 0.00 4.34
3631 4235 7.676043 TCCTATTCTTATGATTCTCCTACCCTG 59.324 40.741 0.00 0.00 0.00 4.45
3632 4236 7.456269 CCTATTCTTATGATTCTCCTACCCTGT 59.544 40.741 0.00 0.00 0.00 4.00
3633 4237 6.485830 TTCTTATGATTCTCCTACCCTGTG 57.514 41.667 0.00 0.00 0.00 3.66
3634 4238 5.777449 TCTTATGATTCTCCTACCCTGTGA 58.223 41.667 0.00 0.00 0.00 3.58
3635 4239 6.202331 TCTTATGATTCTCCTACCCTGTGAA 58.798 40.000 0.00 0.00 0.00 3.18
3636 4240 4.762289 ATGATTCTCCTACCCTGTGAAC 57.238 45.455 0.00 0.00 0.00 3.18
3637 4241 2.838202 TGATTCTCCTACCCTGTGAACC 59.162 50.000 0.00 0.00 0.00 3.62
3638 4242 2.409064 TTCTCCTACCCTGTGAACCA 57.591 50.000 0.00 0.00 0.00 3.67
3639 4243 2.409064 TCTCCTACCCTGTGAACCAA 57.591 50.000 0.00 0.00 0.00 3.67
3640 4244 2.696775 TCTCCTACCCTGTGAACCAAA 58.303 47.619 0.00 0.00 0.00 3.28
3641 4245 2.637872 TCTCCTACCCTGTGAACCAAAG 59.362 50.000 0.00 0.00 0.00 2.77
3642 4246 1.702957 TCCTACCCTGTGAACCAAAGG 59.297 52.381 0.00 0.00 38.55 3.11
3643 4247 1.702957 CCTACCCTGTGAACCAAAGGA 59.297 52.381 4.77 0.00 41.22 3.36
3644 4248 2.290323 CCTACCCTGTGAACCAAAGGAG 60.290 54.545 4.77 0.00 41.22 3.69
3645 4249 1.518367 ACCCTGTGAACCAAAGGAGA 58.482 50.000 4.77 0.00 41.22 3.71
3646 4250 1.143073 ACCCTGTGAACCAAAGGAGAC 59.857 52.381 4.77 0.00 41.22 3.36
3647 4251 1.545651 CCCTGTGAACCAAAGGAGACC 60.546 57.143 4.77 0.00 41.22 3.85
3648 4252 1.545651 CCTGTGAACCAAAGGAGACCC 60.546 57.143 0.00 0.00 41.22 4.46
3649 4253 3.888930 CCTGTGAACCAAAGGAGACCCT 61.889 54.545 0.00 0.00 41.22 4.34
3650 4254 2.637872 CTGTGAACCAAAGGAGACCCTA 59.362 50.000 0.00 0.00 43.48 3.53
3651 4255 2.637872 TGTGAACCAAAGGAGACCCTAG 59.362 50.000 0.00 0.00 43.48 3.02
3652 4256 2.027100 GTGAACCAAAGGAGACCCTAGG 60.027 54.545 0.06 0.06 43.48 3.02
3653 4257 1.560146 GAACCAAAGGAGACCCTAGGG 59.440 57.143 27.36 27.36 43.48 3.53
3667 4271 3.120108 CCCTAGGGTTTATTGGACTCCA 58.880 50.000 20.88 0.00 0.00 3.86
3682 4286 6.713762 TGGACTCCAAAATATGCCAATTAG 57.286 37.500 0.00 0.00 0.00 1.73
3687 4291 4.898861 TCCAAAATATGCCAATTAGGGTCC 59.101 41.667 0.00 0.00 38.09 4.46
3688 4292 4.653341 CCAAAATATGCCAATTAGGGTCCA 59.347 41.667 0.00 0.00 38.09 4.02
3696 4300 5.337788 TGCCAATTAGGGTCCAATACTTTT 58.662 37.500 0.00 0.00 38.09 2.27
3700 4305 7.096551 CCAATTAGGGTCCAATACTTTTGTTG 58.903 38.462 0.00 0.00 0.00 3.33
3702 4307 2.897326 AGGGTCCAATACTTTTGTTGCC 59.103 45.455 0.00 0.00 0.00 4.52
3703 4308 2.028476 GGGTCCAATACTTTTGTTGCCC 60.028 50.000 0.00 0.00 0.00 5.36
3707 4312 3.900601 TCCAATACTTTTGTTGCCCACAT 59.099 39.130 0.00 0.00 34.43 3.21
3709 4314 3.959535 ATACTTTTGTTGCCCACATGG 57.040 42.857 0.00 0.00 34.43 3.66
3711 4316 1.412343 ACTTTTGTTGCCCACATGGAC 59.588 47.619 0.00 0.00 34.43 4.02
3714 4319 1.451337 TTGTTGCCCACATGGACACG 61.451 55.000 0.00 0.00 34.43 4.49
3717 4325 1.451337 TTGCCCACATGGACACGTTG 61.451 55.000 0.00 0.00 37.39 4.10
3718 4326 2.953821 CCCACATGGACACGTTGC 59.046 61.111 0.00 0.00 37.39 4.17
3723 4331 0.944386 ACATGGACACGTTGCTGAAC 59.056 50.000 0.00 0.00 0.00 3.18
3737 4345 3.754965 TGCTGAACAAGTAGGCAAATCT 58.245 40.909 0.00 0.00 0.00 2.40
3739 4347 3.753272 GCTGAACAAGTAGGCAAATCTGA 59.247 43.478 0.00 0.00 0.00 3.27
3740 4348 4.378874 GCTGAACAAGTAGGCAAATCTGAC 60.379 45.833 0.00 0.00 0.00 3.51
3744 4365 5.483685 ACAAGTAGGCAAATCTGACACTA 57.516 39.130 0.00 0.00 30.13 2.74
3745 4366 5.238583 ACAAGTAGGCAAATCTGACACTAC 58.761 41.667 0.00 0.00 30.13 2.73
3746 4367 4.473477 AGTAGGCAAATCTGACACTACC 57.527 45.455 0.00 0.00 33.19 3.18
3751 4372 3.758554 GGCAAATCTGACACTACCACATT 59.241 43.478 0.00 0.00 0.00 2.71
3761 4382 3.181480 ACACTACCACATTTTTGTGCACC 60.181 43.478 15.69 0.00 38.40 5.01
3764 4385 1.767681 ACCACATTTTTGTGCACCCAT 59.232 42.857 15.69 0.00 38.40 4.00
3766 4387 3.006752 ACCACATTTTTGTGCACCCATAG 59.993 43.478 15.69 2.54 38.40 2.23
3770 4391 5.757320 CACATTTTTGTGCACCCATAGAAAA 59.243 36.000 15.69 10.22 32.72 2.29
3771 4392 5.757808 ACATTTTTGTGCACCCATAGAAAAC 59.242 36.000 15.69 0.00 0.00 2.43
3772 4393 5.344743 TTTTTGTGCACCCATAGAAAACA 57.655 34.783 15.69 0.00 0.00 2.83
3773 4394 5.543507 TTTTGTGCACCCATAGAAAACAT 57.456 34.783 15.69 0.00 0.00 2.71
3777 4405 3.088532 TGCACCCATAGAAAACATGGTC 58.911 45.455 0.00 0.00 41.26 4.02
3781 4409 5.126067 CACCCATAGAAAACATGGTCCTAG 58.874 45.833 0.00 0.00 41.26 3.02
3787 4415 7.148239 CCATAGAAAACATGGTCCTAGTTGAAC 60.148 40.741 0.00 0.00 38.53 3.18
3791 4419 2.290323 ACATGGTCCTAGTTGAACAGCC 60.290 50.000 0.00 0.00 34.95 4.85
3821 4449 1.453015 TGGCAACACACAGTGTCCC 60.453 57.895 2.14 7.88 46.79 4.46
3822 4450 1.152963 GGCAACACACAGTGTCCCT 60.153 57.895 2.14 0.00 46.79 4.20
3826 4454 2.094234 GCAACACACAGTGTCCCTTTTT 60.094 45.455 2.14 0.00 46.79 1.94
3827 4455 3.129638 GCAACACACAGTGTCCCTTTTTA 59.870 43.478 2.14 0.00 46.79 1.52
3828 4456 4.733523 GCAACACACAGTGTCCCTTTTTAG 60.734 45.833 2.14 0.00 46.79 1.85
3829 4457 3.551846 ACACACAGTGTCCCTTTTTAGG 58.448 45.455 2.14 0.00 43.92 2.69
3830 4458 2.293399 CACACAGTGTCCCTTTTTAGGC 59.707 50.000 2.14 0.00 0.00 3.93
3832 4460 1.780919 ACAGTGTCCCTTTTTAGGCCT 59.219 47.619 11.78 11.78 0.00 5.19
3846 4474 4.799564 TTAGGCCTTGCTTAAACAATGG 57.200 40.909 12.58 0.00 27.54 3.16
3848 4476 2.972021 AGGCCTTGCTTAAACAATGGTT 59.028 40.909 0.00 0.00 39.43 3.67
3850 4478 4.220602 AGGCCTTGCTTAAACAATGGTTAG 59.779 41.667 0.00 0.00 35.82 2.34
3855 4483 6.808212 CCTTGCTTAAACAATGGTTAGATGTG 59.192 38.462 0.00 0.00 35.82 3.21
3867 4507 3.374058 GGTTAGATGTGGTTTCATCACGG 59.626 47.826 8.93 0.00 44.46 4.94
3884 4524 1.308998 CGGCAAGACCAAGAACACTT 58.691 50.000 0.00 0.00 39.03 3.16
3885 4525 1.002468 CGGCAAGACCAAGAACACTTG 60.002 52.381 0.00 0.00 41.46 3.16
3888 4528 3.070429 CAAGACCAAGAACACTTGCAC 57.930 47.619 0.00 0.00 39.47 4.57
3889 4529 2.684881 CAAGACCAAGAACACTTGCACT 59.315 45.455 0.00 0.00 39.47 4.40
3909 4549 6.116126 GCACTGACCTAGATTATTCCTGTTT 58.884 40.000 0.00 0.00 0.00 2.83
3914 4554 6.170846 ACCTAGATTATTCCTGTTTACCCG 57.829 41.667 0.00 0.00 0.00 5.28
3923 4563 3.667360 TCCTGTTTACCCGTAGAAAAGC 58.333 45.455 0.00 0.00 0.00 3.51
3932 4572 1.134220 CCGTAGAAAAGCATGGCCCTA 60.134 52.381 0.00 0.00 0.00 3.53
3933 4573 2.213499 CGTAGAAAAGCATGGCCCTAG 58.787 52.381 0.00 0.00 0.00 3.02
3934 4574 2.158957 CGTAGAAAAGCATGGCCCTAGA 60.159 50.000 0.00 0.00 0.00 2.43
3935 4575 2.426842 AGAAAAGCATGGCCCTAGAC 57.573 50.000 0.00 0.00 0.00 2.59
3936 4576 1.064389 AGAAAAGCATGGCCCTAGACC 60.064 52.381 0.00 0.00 0.00 3.85
3937 4577 0.704076 AAAAGCATGGCCCTAGACCA 59.296 50.000 0.00 6.89 42.61 4.02
3938 4578 0.704076 AAAGCATGGCCCTAGACCAA 59.296 50.000 0.00 0.00 41.49 3.67
3957 4597 1.136147 GAACAGCTCATGGCAAGCG 59.864 57.895 5.58 4.03 44.59 4.68
3976 4616 4.494484 AGCGTGGCAAAATAAGAAATTCC 58.506 39.130 0.00 0.00 0.00 3.01
3977 4617 4.220602 AGCGTGGCAAAATAAGAAATTCCT 59.779 37.500 0.00 0.00 0.00 3.36
3978 4618 4.327087 GCGTGGCAAAATAAGAAATTCCTG 59.673 41.667 0.00 0.00 0.00 3.86
3979 4619 5.469479 CGTGGCAAAATAAGAAATTCCTGT 58.531 37.500 0.00 0.00 0.00 4.00
3980 4620 5.572896 CGTGGCAAAATAAGAAATTCCTGTC 59.427 40.000 0.00 0.00 0.00 3.51
3982 4622 7.154656 GTGGCAAAATAAGAAATTCCTGTCTT 58.845 34.615 0.00 0.00 37.78 3.01
3983 4623 7.329471 GTGGCAAAATAAGAAATTCCTGTCTTC 59.671 37.037 0.00 0.00 35.69 2.87
3984 4624 7.015098 TGGCAAAATAAGAAATTCCTGTCTTCA 59.985 33.333 0.00 0.00 35.69 3.02
3985 4625 7.543520 GGCAAAATAAGAAATTCCTGTCTTCAG 59.456 37.037 0.00 0.00 41.01 3.02
3997 4637 5.975282 TCCTGTCTTCAGAGAAATCATCAG 58.025 41.667 0.00 0.00 43.76 2.90
4010 4650 4.647564 AATCATCAGGACCAAGAACACT 57.352 40.909 0.00 0.00 0.00 3.55
4011 4651 3.407424 TCATCAGGACCAAGAACACTG 57.593 47.619 0.00 0.00 0.00 3.66
4035 4692 2.295349 GCATGCCTCTATCATGGTTTGG 59.705 50.000 6.36 0.00 41.08 3.28
4039 4696 3.217626 GCCTCTATCATGGTTTGGGAAG 58.782 50.000 0.00 0.00 0.00 3.46
4040 4697 3.217626 CCTCTATCATGGTTTGGGAAGC 58.782 50.000 0.00 0.00 0.00 3.86
4041 4698 3.371917 CCTCTATCATGGTTTGGGAAGCA 60.372 47.826 0.00 0.00 46.21 3.91
4042 4699 4.272489 CTCTATCATGGTTTGGGAAGCAA 58.728 43.478 0.00 0.00 45.40 3.91
4070 4727 3.734902 GCCCCGCAGATGACATTTTTAAG 60.735 47.826 0.00 0.00 0.00 1.85
4071 4728 3.694072 CCCCGCAGATGACATTTTTAAGA 59.306 43.478 0.00 0.00 0.00 2.10
4073 4730 4.201950 CCCGCAGATGACATTTTTAAGAGG 60.202 45.833 0.00 0.00 0.00 3.69
4093 4756 2.642183 TAAAACCAGTTGCCGGGCCA 62.642 55.000 17.97 1.48 0.00 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.369091 GATGCAACGGGTCAATCGCT 61.369 55.000 0.00 0.00 0.00 4.93
1 2 1.062525 GATGCAACGGGTCAATCGC 59.937 57.895 0.00 0.00 0.00 4.58
2 3 1.024046 TGGATGCAACGGGTCAATCG 61.024 55.000 0.00 0.00 0.00 3.34
3 4 1.173043 TTGGATGCAACGGGTCAATC 58.827 50.000 0.00 0.00 0.00 2.67
4 5 1.272212 GTTTGGATGCAACGGGTCAAT 59.728 47.619 0.00 0.00 0.00 2.57
5 6 0.671251 GTTTGGATGCAACGGGTCAA 59.329 50.000 0.00 0.00 0.00 3.18
6 7 1.175983 GGTTTGGATGCAACGGGTCA 61.176 55.000 0.00 0.00 0.00 4.02
7 8 1.584495 GGTTTGGATGCAACGGGTC 59.416 57.895 0.00 0.00 0.00 4.46
8 9 1.906333 GGGTTTGGATGCAACGGGT 60.906 57.895 0.00 0.00 0.00 5.28
9 10 1.876497 CTGGGTTTGGATGCAACGGG 61.876 60.000 0.00 0.00 0.00 5.28
10 11 1.586028 CTGGGTTTGGATGCAACGG 59.414 57.895 0.00 0.00 0.00 4.44
11 12 0.893270 TCCTGGGTTTGGATGCAACG 60.893 55.000 0.00 0.00 0.00 4.10
12 13 0.890683 CTCCTGGGTTTGGATGCAAC 59.109 55.000 0.00 0.00 32.56 4.17
13 14 0.251742 CCTCCTGGGTTTGGATGCAA 60.252 55.000 0.00 0.00 32.56 4.08
14 15 1.139498 TCCTCCTGGGTTTGGATGCA 61.139 55.000 0.00 0.00 36.25 3.96
15 16 0.681243 GTCCTCCTGGGTTTGGATGC 60.681 60.000 0.00 0.00 36.25 3.91
16 17 0.392998 CGTCCTCCTGGGTTTGGATG 60.393 60.000 0.00 0.00 36.25 3.51
17 18 1.562672 CCGTCCTCCTGGGTTTGGAT 61.563 60.000 0.00 0.00 36.25 3.41
18 19 2.221299 CCGTCCTCCTGGGTTTGGA 61.221 63.158 0.00 0.00 36.25 3.53
19 20 2.185310 CTCCGTCCTCCTGGGTTTGG 62.185 65.000 0.00 0.00 36.25 3.28
20 21 1.296715 CTCCGTCCTCCTGGGTTTG 59.703 63.158 0.00 0.00 36.25 2.93
21 22 1.918800 CCTCCGTCCTCCTGGGTTT 60.919 63.158 0.00 0.00 36.25 3.27
22 23 2.284699 CCTCCGTCCTCCTGGGTT 60.285 66.667 0.00 0.00 36.25 4.11
28 29 4.821589 CTTGCGCCTCCGTCCTCC 62.822 72.222 4.18 0.00 36.67 4.30
40 41 3.385999 CACGTTTTGGCGCTTGCG 61.386 61.111 7.64 10.90 40.46 4.85
45 46 4.337060 GGGGTCACGTTTTGGCGC 62.337 66.667 0.00 0.00 42.03 6.53
68 69 4.137116 TGGATACATACAGTGGTCTTGC 57.863 45.455 0.00 0.00 46.17 4.01
145 169 1.178276 GGTCAGATCAGTGGACGACT 58.822 55.000 0.00 0.00 34.02 4.18
146 170 0.179161 CGGTCAGATCAGTGGACGAC 60.179 60.000 0.00 0.00 32.39 4.34
147 171 1.934220 GCGGTCAGATCAGTGGACGA 61.934 60.000 0.00 0.00 32.39 4.20
149 173 0.037326 TTGCGGTCAGATCAGTGGAC 60.037 55.000 0.00 0.00 0.00 4.02
150 174 0.684535 TTTGCGGTCAGATCAGTGGA 59.315 50.000 0.00 0.00 0.00 4.02
151 175 0.798776 GTTTGCGGTCAGATCAGTGG 59.201 55.000 0.00 0.00 0.00 4.00
152 176 0.798776 GGTTTGCGGTCAGATCAGTG 59.201 55.000 0.00 0.00 0.00 3.66
153 177 0.670546 CGGTTTGCGGTCAGATCAGT 60.671 55.000 0.00 0.00 0.00 3.41
154 178 1.970917 GCGGTTTGCGGTCAGATCAG 61.971 60.000 0.00 0.00 0.00 2.90
155 179 2.032634 GCGGTTTGCGGTCAGATCA 61.033 57.895 0.00 0.00 0.00 2.92
156 180 2.785258 GCGGTTTGCGGTCAGATC 59.215 61.111 0.00 0.00 0.00 2.75
192 226 2.496871 AGATGGAGAGTGAGTGCAAGAG 59.503 50.000 0.00 0.00 0.00 2.85
210 244 1.158007 GGAGGGAGGGAGAGAGAGAT 58.842 60.000 0.00 0.00 0.00 2.75
211 245 0.996762 GGGAGGGAGGGAGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
212 246 0.998945 AGGGAGGGAGGGAGAGAGAG 60.999 65.000 0.00 0.00 0.00 3.20
213 247 0.996762 GAGGGAGGGAGGGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
214 248 1.541672 GAGGGAGGGAGGGAGAGAG 59.458 68.421 0.00 0.00 0.00 3.20
215 249 2.015726 GGAGGGAGGGAGGGAGAGA 61.016 68.421 0.00 0.00 0.00 3.10
216 250 2.018086 AGGAGGGAGGGAGGGAGAG 61.018 68.421 0.00 0.00 0.00 3.20
217 251 2.015726 GAGGAGGGAGGGAGGGAGA 61.016 68.421 0.00 0.00 0.00 3.71
218 252 2.328589 TGAGGAGGGAGGGAGGGAG 61.329 68.421 0.00 0.00 0.00 4.30
219 253 2.204624 TGAGGAGGGAGGGAGGGA 60.205 66.667 0.00 0.00 0.00 4.20
220 254 2.041405 GTGAGGAGGGAGGGAGGG 60.041 72.222 0.00 0.00 0.00 4.30
221 255 2.443016 CGTGAGGAGGGAGGGAGG 60.443 72.222 0.00 0.00 0.00 4.30
222 256 3.151022 GCGTGAGGAGGGAGGGAG 61.151 72.222 0.00 0.00 0.00 4.30
428 500 2.811317 CTCGCTCTTCACCGCACC 60.811 66.667 0.00 0.00 0.00 5.01
432 504 4.116328 TCGCCTCGCTCTTCACCG 62.116 66.667 0.00 0.00 0.00 4.94
433 505 2.202676 CTCGCCTCGCTCTTCACC 60.203 66.667 0.00 0.00 0.00 4.02
434 506 0.179124 ATTCTCGCCTCGCTCTTCAC 60.179 55.000 0.00 0.00 0.00 3.18
435 507 0.101399 GATTCTCGCCTCGCTCTTCA 59.899 55.000 0.00 0.00 0.00 3.02
436 508 0.596341 GGATTCTCGCCTCGCTCTTC 60.596 60.000 0.00 0.00 0.00 2.87
437 509 1.323271 TGGATTCTCGCCTCGCTCTT 61.323 55.000 0.00 0.00 0.00 2.85
438 510 1.323271 TTGGATTCTCGCCTCGCTCT 61.323 55.000 0.00 0.00 0.00 4.09
439 511 0.249657 ATTGGATTCTCGCCTCGCTC 60.250 55.000 0.00 0.00 0.00 5.03
467 539 1.154836 CAGTCGCTTCGTTTCACGC 60.155 57.895 0.00 0.00 42.21 5.34
496 568 3.937372 TTTCTCCCCCTCCCGTCCC 62.937 68.421 0.00 0.00 0.00 4.46
551 624 2.115910 TGGCTGGGAAGCACAAGG 59.884 61.111 0.00 0.00 36.33 3.61
554 627 1.153524 AATGTGGCTGGGAAGCACA 59.846 52.632 0.00 0.00 36.33 4.57
613 689 7.152645 CAGGAAAGAAACTGCTAGTTGTACTA 58.847 38.462 0.00 0.00 38.66 1.82
617 693 4.137543 CCAGGAAAGAAACTGCTAGTTGT 58.862 43.478 2.88 0.00 38.66 3.32
618 694 4.023707 CACCAGGAAAGAAACTGCTAGTTG 60.024 45.833 0.00 0.00 38.66 3.16
619 695 4.137543 CACCAGGAAAGAAACTGCTAGTT 58.862 43.478 0.00 0.00 40.80 2.24
650 726 4.142600 GCTTTGTTTAATCGCTCACTCCAT 60.143 41.667 0.00 0.00 0.00 3.41
651 727 3.188460 GCTTTGTTTAATCGCTCACTCCA 59.812 43.478 0.00 0.00 0.00 3.86
654 730 2.159627 CCGCTTTGTTTAATCGCTCACT 59.840 45.455 0.00 0.00 0.00 3.41
656 732 1.135803 GCCGCTTTGTTTAATCGCTCA 60.136 47.619 0.00 0.00 0.00 4.26
657 733 1.535088 GCCGCTTTGTTTAATCGCTC 58.465 50.000 0.00 0.00 0.00 5.03
658 734 0.179200 CGCCGCTTTGTTTAATCGCT 60.179 50.000 0.00 0.00 0.00 4.93
659 735 1.131618 CCGCCGCTTTGTTTAATCGC 61.132 55.000 0.00 0.00 0.00 4.58
660 736 0.167251 ACCGCCGCTTTGTTTAATCG 59.833 50.000 0.00 0.00 0.00 3.34
794 1245 1.806568 CAGAGAGTGGGAGAGCGTC 59.193 63.158 0.00 0.00 0.00 5.19
795 1246 2.347322 GCAGAGAGTGGGAGAGCGT 61.347 63.158 0.00 0.00 0.00 5.07
796 1247 2.493973 GCAGAGAGTGGGAGAGCG 59.506 66.667 0.00 0.00 0.00 5.03
797 1248 1.986757 TGGCAGAGAGTGGGAGAGC 60.987 63.158 0.00 0.00 0.00 4.09
800 1251 1.595882 CAGTGGCAGAGAGTGGGAG 59.404 63.158 0.00 0.00 0.00 4.30
801 1252 2.587247 GCAGTGGCAGAGAGTGGGA 61.587 63.158 0.00 0.00 40.72 4.37
802 1253 2.046507 GCAGTGGCAGAGAGTGGG 60.047 66.667 0.00 0.00 40.72 4.61
878 1329 2.756283 AGAGAACGGGAGGCGGAG 60.756 66.667 0.00 0.00 0.00 4.63
910 1379 1.673920 AGAAAAGAAAGAAACGCCGCA 59.326 42.857 0.00 0.00 0.00 5.69
912 1381 3.947626 TCAAGAAAAGAAAGAAACGCCG 58.052 40.909 0.00 0.00 0.00 6.46
965 1434 3.779759 CCAAGAACAGCACTAGAGCTAG 58.220 50.000 14.63 11.29 44.54 3.42
970 1439 0.679505 ACGCCAAGAACAGCACTAGA 59.320 50.000 0.00 0.00 0.00 2.43
973 1442 1.893808 CCACGCCAAGAACAGCACT 60.894 57.895 0.00 0.00 0.00 4.40
974 1443 1.845809 CTCCACGCCAAGAACAGCAC 61.846 60.000 0.00 0.00 0.00 4.40
976 1445 2.328099 CCTCCACGCCAAGAACAGC 61.328 63.158 0.00 0.00 0.00 4.40
977 1446 0.671781 CTCCTCCACGCCAAGAACAG 60.672 60.000 0.00 0.00 0.00 3.16
980 1449 2.592993 CCCTCCTCCACGCCAAGAA 61.593 63.158 0.00 0.00 0.00 2.52
981 1450 3.003173 CCCTCCTCCACGCCAAGA 61.003 66.667 0.00 0.00 0.00 3.02
982 1451 4.101448 CCCCTCCTCCACGCCAAG 62.101 72.222 0.00 0.00 0.00 3.61
983 1452 3.943137 ATCCCCTCCTCCACGCCAA 62.943 63.158 0.00 0.00 0.00 4.52
984 1453 4.414956 ATCCCCTCCTCCACGCCA 62.415 66.667 0.00 0.00 0.00 5.69
985 1454 3.866582 CATCCCCTCCTCCACGCC 61.867 72.222 0.00 0.00 0.00 5.68
987 1456 3.164269 CCCATCCCCTCCTCCACG 61.164 72.222 0.00 0.00 0.00 4.94
1066 1535 4.704833 GGCTCGCCTCACCTTGCA 62.705 66.667 0.00 0.00 0.00 4.08
1086 1573 1.935799 TGGAGAGAGCAAGAAGAGCT 58.064 50.000 0.00 0.00 46.82 4.09
1160 1686 9.748708 CCTCAAGAAACTCTAGATGAATCTAAG 57.251 37.037 0.00 5.24 38.80 2.18
1244 1779 0.539669 GGATTTTAGCCGGGATGGGG 60.540 60.000 2.18 0.00 38.63 4.96
1250 1785 0.394352 AGCAGTGGATTTTAGCCGGG 60.394 55.000 2.18 0.00 0.00 5.73
1256 1791 3.758554 GGAGCTTTGAGCAGTGGATTTTA 59.241 43.478 2.47 0.00 45.56 1.52
1266 1801 1.656587 TTAGAGGGGAGCTTTGAGCA 58.343 50.000 2.47 0.00 45.56 4.26
1270 1805 2.239654 TGGTCATTAGAGGGGAGCTTTG 59.760 50.000 0.00 0.00 0.00 2.77
1274 1809 0.105039 CGTGGTCATTAGAGGGGAGC 59.895 60.000 0.00 0.00 0.00 4.70
1275 1810 0.105039 GCGTGGTCATTAGAGGGGAG 59.895 60.000 0.00 0.00 0.00 4.30
1312 1847 0.733909 TCTTGAGAGACATGTGCGCG 60.734 55.000 1.15 0.00 0.00 6.86
1382 1917 2.947852 AGTAGTACTTGTGAAGCAGCG 58.052 47.619 0.00 0.00 0.00 5.18
1401 1936 7.284944 ACTTGGGCAGTACTACTACAAGTATAG 59.715 40.741 23.33 8.86 41.10 1.31
1403 1938 5.956563 ACTTGGGCAGTACTACTACAAGTAT 59.043 40.000 23.33 9.75 41.10 2.12
1471 2007 3.433740 GGGATGAGATTTACCACCCAGAC 60.434 52.174 0.00 0.00 36.27 3.51
1472 2008 2.777692 GGGATGAGATTTACCACCCAGA 59.222 50.000 0.00 0.00 36.27 3.86
1473 2009 2.509548 TGGGATGAGATTTACCACCCAG 59.490 50.000 0.00 0.00 40.52 4.45
1474 2010 2.567862 TGGGATGAGATTTACCACCCA 58.432 47.619 0.00 0.00 42.70 4.51
1475 2011 3.662759 TTGGGATGAGATTTACCACCC 57.337 47.619 0.00 0.00 36.72 4.61
1476 2012 4.600062 ACTTTGGGATGAGATTTACCACC 58.400 43.478 0.00 0.00 0.00 4.61
1482 2018 5.182001 CACGAGAAACTTTGGGATGAGATTT 59.818 40.000 0.00 0.00 0.00 2.17
1492 2028 4.364415 TGAAAACCACGAGAAACTTTGG 57.636 40.909 0.00 0.00 35.06 3.28
1507 2064 5.693814 AGATTTGAAGCTCGACATGAAAAC 58.306 37.500 0.00 0.00 0.00 2.43
1569 2126 1.597742 TGTTCTGCAGGAGAAACAGC 58.402 50.000 15.13 0.00 42.56 4.40
1573 2136 2.224606 CAGCTTGTTCTGCAGGAGAAA 58.775 47.619 15.13 1.61 42.56 2.52
1761 2324 4.147322 GTGAACATGTCGGCGGCG 62.147 66.667 27.15 27.15 0.00 6.46
1762 2325 3.799755 GGTGAACATGTCGGCGGC 61.800 66.667 3.62 3.62 0.00 6.53
1763 2326 3.487202 CGGTGAACATGTCGGCGG 61.487 66.667 7.21 0.00 0.00 6.13
1764 2327 4.147322 GCGGTGAACATGTCGGCG 62.147 66.667 0.00 0.00 0.00 6.46
1765 2328 3.799755 GGCGGTGAACATGTCGGC 61.800 66.667 13.97 13.97 40.61 5.54
1766 2329 3.487202 CGGCGGTGAACATGTCGG 61.487 66.667 0.00 0.00 0.00 4.79
1872 2435 1.447314 GGTTCGTACCAGGAAGCCG 60.447 63.158 6.31 0.00 44.36 5.52
1886 2449 1.448717 GGCCTGAGAAGAGCGGTTC 60.449 63.158 0.00 0.00 0.00 3.62
2216 2797 0.042731 TGGAGGAGGACAGGTAAGGG 59.957 60.000 0.00 0.00 0.00 3.95
2221 2802 2.122768 GATTCATGGAGGAGGACAGGT 58.877 52.381 0.00 0.00 0.00 4.00
2264 2845 5.801350 TGAGTTTATTCAATGCGAAGGAG 57.199 39.130 0.00 0.00 36.95 3.69
2278 2868 8.034313 TGGCTAAAGATCCTACATGAGTTTAT 57.966 34.615 0.00 0.00 0.00 1.40
2279 2869 7.432148 TGGCTAAAGATCCTACATGAGTTTA 57.568 36.000 0.00 0.00 0.00 2.01
2298 2888 3.118629 ACTCGAATCAGCAAAGATGGCTA 60.119 43.478 0.00 0.00 40.23 3.93
2370 2960 0.457851 CTAGAGTTCCCTGGCTGTCG 59.542 60.000 0.00 0.00 0.00 4.35
2505 3095 4.713814 TCAGATGAGCAGTAGTGGAATTCT 59.286 41.667 5.23 0.00 0.00 2.40
2508 3098 5.129980 TCATTCAGATGAGCAGTAGTGGAAT 59.870 40.000 0.00 0.00 37.37 3.01
2510 3100 4.026052 TCATTCAGATGAGCAGTAGTGGA 58.974 43.478 0.00 0.00 37.37 4.02
2511 3101 4.397481 TCATTCAGATGAGCAGTAGTGG 57.603 45.455 0.00 0.00 37.37 4.00
2587 3184 3.607370 GAGGCCCGACTGGTTGGAC 62.607 68.421 0.00 0.00 36.15 4.02
2791 3388 1.734465 CTCACCTTGACTGAATTCGGC 59.266 52.381 14.40 7.83 0.00 5.54
2866 3463 3.273080 CTGGGCTTTGAACCGCTGC 62.273 63.158 0.00 0.00 0.00 5.25
2956 3553 0.669318 TGGAGAACGACAATGGCGTC 60.669 55.000 16.81 8.83 41.75 5.19
2959 3556 0.321653 AGGTGGAGAACGACAATGGC 60.322 55.000 0.00 0.00 0.00 4.40
3001 3598 4.170062 CTGACGCCGCTGCCATTG 62.170 66.667 0.00 0.00 0.00 2.82
3022 3619 0.461961 AGCTCATGTAGTTCGGCCTC 59.538 55.000 0.00 0.00 0.00 4.70
3097 3694 2.477825 CGATCATCCAACTGCTTCGAT 58.522 47.619 0.00 0.00 0.00 3.59
3171 3768 2.834549 TCATCTCTTCCTGGAGTTCCAC 59.165 50.000 0.00 0.00 42.01 4.02
3182 3779 5.416952 TGAAAATTGGCTCTTCATCTCTTCC 59.583 40.000 0.00 0.00 0.00 3.46
3206 3804 4.348168 TGAAAAACACCCTAGAGAGAGCTT 59.652 41.667 0.00 0.00 0.00 3.74
3267 3869 1.597742 ACATGAGACACCAGCAACAC 58.402 50.000 0.00 0.00 0.00 3.32
3268 3870 2.221169 GAACATGAGACACCAGCAACA 58.779 47.619 0.00 0.00 0.00 3.33
3269 3871 2.221169 TGAACATGAGACACCAGCAAC 58.779 47.619 0.00 0.00 0.00 4.17
3270 3872 2.618241 GTTGAACATGAGACACCAGCAA 59.382 45.455 0.00 0.00 0.00 3.91
3329 3931 1.475280 CACTGCCAATGACAATGAGGG 59.525 52.381 0.00 0.00 0.00 4.30
3346 3948 9.262358 GTCAAAGAACTATCTTACAAAGACACT 57.738 33.333 0.00 0.00 45.19 3.55
3349 3951 9.477484 TCAGTCAAAGAACTATCTTACAAAGAC 57.523 33.333 0.00 0.00 45.19 3.01
3384 3988 7.710475 CCTGAACTAACAAAATCCACACAATTT 59.290 33.333 0.00 0.00 0.00 1.82
3403 4007 5.594317 AGTAACAATTTTCACAGCCTGAACT 59.406 36.000 0.00 0.00 38.70 3.01
3404 4008 5.831997 AGTAACAATTTTCACAGCCTGAAC 58.168 37.500 0.00 0.00 38.70 3.18
3410 4014 8.507249 AGAACATCTAGTAACAATTTTCACAGC 58.493 33.333 0.00 0.00 0.00 4.40
3420 4024 9.026121 AGAGAAGCTAAGAACATCTAGTAACAA 57.974 33.333 0.00 0.00 0.00 2.83
3421 4025 8.582657 AGAGAAGCTAAGAACATCTAGTAACA 57.417 34.615 0.00 0.00 0.00 2.41
3427 4031 6.609212 ACCATGAGAGAAGCTAAGAACATCTA 59.391 38.462 0.00 0.00 0.00 1.98
3430 4034 5.690464 ACCATGAGAGAAGCTAAGAACAT 57.310 39.130 0.00 0.00 0.00 2.71
3438 4042 3.416156 GGAAACAACCATGAGAGAAGCT 58.584 45.455 0.00 0.00 0.00 3.74
3446 4050 3.342377 TCATAGCGGAAACAACCATGA 57.658 42.857 0.00 0.00 0.00 3.07
3447 4051 3.378112 ACATCATAGCGGAAACAACCATG 59.622 43.478 0.00 0.00 0.00 3.66
3448 4052 3.378112 CACATCATAGCGGAAACAACCAT 59.622 43.478 0.00 0.00 0.00 3.55
3449 4053 2.746904 CACATCATAGCGGAAACAACCA 59.253 45.455 0.00 0.00 0.00 3.67
3450 4054 3.006940 TCACATCATAGCGGAAACAACC 58.993 45.455 0.00 0.00 0.00 3.77
3455 4059 2.499693 TGAGGTCACATCATAGCGGAAA 59.500 45.455 0.00 0.00 0.00 3.13
3458 4062 2.602257 TTGAGGTCACATCATAGCGG 57.398 50.000 0.00 0.00 0.00 5.52
3459 4063 3.261580 TGTTTGAGGTCACATCATAGCG 58.738 45.455 0.00 0.00 0.00 4.26
3465 4069 3.141398 TGAGCTTGTTTGAGGTCACATC 58.859 45.455 2.94 0.00 46.04 3.06
3466 4070 3.213206 TGAGCTTGTTTGAGGTCACAT 57.787 42.857 2.94 0.00 46.04 3.21
3470 4074 3.206150 TGACTTGAGCTTGTTTGAGGTC 58.794 45.455 0.00 0.00 42.87 3.85
3497 4101 9.486497 AACATGTAGTGAGATATTTCAGCATAG 57.514 33.333 0.00 1.75 0.00 2.23
3498 4102 9.836864 AAACATGTAGTGAGATATTTCAGCATA 57.163 29.630 0.00 0.00 0.00 3.14
3515 4119 3.947834 CCAAAGGAGGCCTAAACATGTAG 59.052 47.826 4.42 0.00 31.13 2.74
3520 4124 3.322191 AAACCAAAGGAGGCCTAAACA 57.678 42.857 4.42 0.00 31.13 2.83
3528 4132 6.918067 AAAATTCCTCTAAACCAAAGGAGG 57.082 37.500 0.00 0.00 44.69 4.30
3549 4153 8.056400 TCAAATCCTATCCCGAATTCCTAAAAA 58.944 33.333 0.00 0.00 0.00 1.94
3550 4154 7.579105 TCAAATCCTATCCCGAATTCCTAAAA 58.421 34.615 0.00 0.00 0.00 1.52
3551 4155 7.071950 TCTCAAATCCTATCCCGAATTCCTAAA 59.928 37.037 0.00 0.00 0.00 1.85
3552 4156 6.557253 TCTCAAATCCTATCCCGAATTCCTAA 59.443 38.462 0.00 0.00 0.00 2.69
3553 4157 6.082031 TCTCAAATCCTATCCCGAATTCCTA 58.918 40.000 0.00 0.00 0.00 2.94
3554 4158 4.907875 TCTCAAATCCTATCCCGAATTCCT 59.092 41.667 0.00 0.00 0.00 3.36
3555 4159 5.228945 TCTCAAATCCTATCCCGAATTCC 57.771 43.478 0.00 0.00 0.00 3.01
3556 4160 7.386851 TGTATCTCAAATCCTATCCCGAATTC 58.613 38.462 0.00 0.00 0.00 2.17
3557 4161 7.316393 TGTATCTCAAATCCTATCCCGAATT 57.684 36.000 0.00 0.00 0.00 2.17
3558 4162 6.935240 TGTATCTCAAATCCTATCCCGAAT 57.065 37.500 0.00 0.00 0.00 3.34
3559 4163 6.270000 ACATGTATCTCAAATCCTATCCCGAA 59.730 38.462 0.00 0.00 0.00 4.30
3560 4164 5.780282 ACATGTATCTCAAATCCTATCCCGA 59.220 40.000 0.00 0.00 0.00 5.14
3561 4165 6.042638 ACATGTATCTCAAATCCTATCCCG 57.957 41.667 0.00 0.00 0.00 5.14
3562 4166 7.009179 TGACATGTATCTCAAATCCTATCCC 57.991 40.000 0.00 0.00 0.00 3.85
3563 4167 8.538701 AGATGACATGTATCTCAAATCCTATCC 58.461 37.037 0.00 0.00 29.05 2.59
3564 4168 9.585099 GAGATGACATGTATCTCAAATCCTATC 57.415 37.037 24.95 6.24 46.22 2.08
3574 4178 6.403866 AGGAAGTGAGATGACATGTATCTC 57.596 41.667 24.04 24.04 46.82 2.75
3575 4179 7.727634 TCATAGGAAGTGAGATGACATGTATCT 59.272 37.037 14.05 14.05 37.59 1.98
3576 4180 7.812191 GTCATAGGAAGTGAGATGACATGTATC 59.188 40.741 0.00 2.87 44.91 2.24
3577 4181 7.508636 AGTCATAGGAAGTGAGATGACATGTAT 59.491 37.037 14.37 0.00 46.94 2.29
3578 4182 6.836007 AGTCATAGGAAGTGAGATGACATGTA 59.164 38.462 14.37 0.00 46.94 2.29
3579 4183 5.660417 AGTCATAGGAAGTGAGATGACATGT 59.340 40.000 14.37 0.00 46.94 3.21
3580 4184 6.159299 AGTCATAGGAAGTGAGATGACATG 57.841 41.667 14.37 0.00 46.94 3.21
3581 4185 6.805016 AAGTCATAGGAAGTGAGATGACAT 57.195 37.500 14.37 1.96 46.94 3.06
3582 4186 6.351371 GGAAAGTCATAGGAAGTGAGATGACA 60.351 42.308 14.37 0.00 46.94 3.58
3583 4187 6.045955 GGAAAGTCATAGGAAGTGAGATGAC 58.954 44.000 5.86 5.86 45.57 3.06
3584 4188 5.960811 AGGAAAGTCATAGGAAGTGAGATGA 59.039 40.000 0.00 0.00 0.00 2.92
3585 4189 6.232581 AGGAAAGTCATAGGAAGTGAGATG 57.767 41.667 0.00 0.00 0.00 2.90
3586 4190 8.560124 AATAGGAAAGTCATAGGAAGTGAGAT 57.440 34.615 0.00 0.00 0.00 2.75
3587 4191 7.841729 AGAATAGGAAAGTCATAGGAAGTGAGA 59.158 37.037 0.00 0.00 0.00 3.27
3588 4192 8.017418 AGAATAGGAAAGTCATAGGAAGTGAG 57.983 38.462 0.00 0.00 0.00 3.51
3589 4193 7.979786 AGAATAGGAAAGTCATAGGAAGTGA 57.020 36.000 0.00 0.00 0.00 3.41
3599 4203 9.218525 AGGAGAATCATAAGAATAGGAAAGTCA 57.781 33.333 0.00 0.00 36.25 3.41
3602 4206 9.936759 GGTAGGAGAATCATAAGAATAGGAAAG 57.063 37.037 0.00 0.00 30.83 2.62
3603 4207 8.881262 GGGTAGGAGAATCATAAGAATAGGAAA 58.119 37.037 0.00 0.00 30.83 3.13
3604 4208 8.242325 AGGGTAGGAGAATCATAAGAATAGGAA 58.758 37.037 0.00 0.00 30.83 3.36
3605 4209 7.676043 CAGGGTAGGAGAATCATAAGAATAGGA 59.324 40.741 0.00 0.00 30.83 2.94
3606 4210 7.456269 ACAGGGTAGGAGAATCATAAGAATAGG 59.544 40.741 0.00 0.00 30.83 2.57
3607 4211 8.310382 CACAGGGTAGGAGAATCATAAGAATAG 58.690 40.741 0.00 0.00 30.83 1.73
3608 4212 8.010697 TCACAGGGTAGGAGAATCATAAGAATA 58.989 37.037 0.00 0.00 30.83 1.75
3609 4213 6.846505 TCACAGGGTAGGAGAATCATAAGAAT 59.153 38.462 0.00 0.00 30.83 2.40
3610 4214 6.202331 TCACAGGGTAGGAGAATCATAAGAA 58.798 40.000 0.00 0.00 30.83 2.52
3611 4215 5.777449 TCACAGGGTAGGAGAATCATAAGA 58.223 41.667 0.00 0.00 30.83 2.10
3612 4216 6.284459 GTTCACAGGGTAGGAGAATCATAAG 58.716 44.000 0.00 0.00 30.83 1.73
3613 4217 5.130477 GGTTCACAGGGTAGGAGAATCATAA 59.870 44.000 0.00 0.00 30.83 1.90
3614 4218 4.654262 GGTTCACAGGGTAGGAGAATCATA 59.346 45.833 0.00 0.00 36.25 2.15
3615 4219 3.456277 GGTTCACAGGGTAGGAGAATCAT 59.544 47.826 0.00 0.00 36.25 2.45
3616 4220 2.838202 GGTTCACAGGGTAGGAGAATCA 59.162 50.000 0.00 0.00 36.25 2.57
3617 4221 2.838202 TGGTTCACAGGGTAGGAGAATC 59.162 50.000 0.00 0.00 0.00 2.52
3618 4222 2.915869 TGGTTCACAGGGTAGGAGAAT 58.084 47.619 0.00 0.00 0.00 2.40
3619 4223 2.409064 TGGTTCACAGGGTAGGAGAA 57.591 50.000 0.00 0.00 0.00 2.87
3620 4224 2.409064 TTGGTTCACAGGGTAGGAGA 57.591 50.000 0.00 0.00 0.00 3.71
3621 4225 2.290323 CCTTTGGTTCACAGGGTAGGAG 60.290 54.545 0.00 0.00 28.53 3.69
3622 4226 1.702957 CCTTTGGTTCACAGGGTAGGA 59.297 52.381 0.00 0.00 28.53 2.94
3623 4227 1.702957 TCCTTTGGTTCACAGGGTAGG 59.297 52.381 0.92 0.00 32.66 3.18
3624 4228 2.637872 TCTCCTTTGGTTCACAGGGTAG 59.362 50.000 0.92 0.00 32.66 3.18
3625 4229 2.370849 GTCTCCTTTGGTTCACAGGGTA 59.629 50.000 0.92 0.00 32.66 3.69
3626 4230 1.143073 GTCTCCTTTGGTTCACAGGGT 59.857 52.381 0.92 0.00 32.66 4.34
3627 4231 1.545651 GGTCTCCTTTGGTTCACAGGG 60.546 57.143 0.92 0.00 32.66 4.45
3628 4232 1.545651 GGGTCTCCTTTGGTTCACAGG 60.546 57.143 0.00 0.00 33.03 4.00
3629 4233 1.421646 AGGGTCTCCTTTGGTTCACAG 59.578 52.381 0.00 0.00 41.56 3.66
3630 4234 1.518367 AGGGTCTCCTTTGGTTCACA 58.482 50.000 0.00 0.00 41.56 3.58
3631 4235 2.027100 CCTAGGGTCTCCTTTGGTTCAC 60.027 54.545 0.00 0.00 41.56 3.18
3632 4236 2.266279 CCTAGGGTCTCCTTTGGTTCA 58.734 52.381 0.00 0.00 41.56 3.18
3633 4237 1.560146 CCCTAGGGTCTCCTTTGGTTC 59.440 57.143 20.88 0.00 41.56 3.62
3634 4238 1.670059 CCCTAGGGTCTCCTTTGGTT 58.330 55.000 20.88 0.00 41.56 3.67
3635 4239 3.419154 CCCTAGGGTCTCCTTTGGT 57.581 57.895 20.88 0.00 41.56 3.67
3643 4247 8.946746 TTGGAGTCCAATAAACCCTAGGGTCT 62.947 46.154 33.95 23.80 42.51 3.85
3644 4248 6.817233 TTGGAGTCCAATAAACCCTAGGGTC 61.817 48.000 33.95 18.13 42.51 4.46
3645 4249 5.013668 TTGGAGTCCAATAAACCCTAGGGT 61.014 45.833 28.99 28.99 44.06 4.34
3646 4250 3.120108 TGGAGTCCAATAAACCCTAGGG 58.880 50.000 27.36 27.36 42.03 3.53
3647 4251 4.855298 TTGGAGTCCAATAAACCCTAGG 57.145 45.455 21.05 0.06 38.75 3.02
3648 4252 8.850156 CATATTTTGGAGTCCAATAAACCCTAG 58.150 37.037 25.12 6.18 43.55 3.02
3649 4253 7.286775 GCATATTTTGGAGTCCAATAAACCCTA 59.713 37.037 25.12 9.76 43.55 3.53
3650 4254 6.098266 GCATATTTTGGAGTCCAATAAACCCT 59.902 38.462 25.12 7.88 43.55 4.34
3651 4255 6.280643 GCATATTTTGGAGTCCAATAAACCC 58.719 40.000 25.12 9.42 43.55 4.11
3652 4256 6.127196 TGGCATATTTTGGAGTCCAATAAACC 60.127 38.462 25.12 19.87 43.55 3.27
3653 4257 6.872920 TGGCATATTTTGGAGTCCAATAAAC 58.127 36.000 25.12 12.37 43.55 2.01
3654 4258 7.487822 TTGGCATATTTTGGAGTCCAATAAA 57.512 32.000 25.12 17.36 43.55 1.40
3655 4259 7.673641 ATTGGCATATTTTGGAGTCCAATAA 57.326 32.000 25.12 20.07 43.55 1.40
3656 4260 7.673641 AATTGGCATATTTTGGAGTCCAATA 57.326 32.000 25.12 20.41 43.55 1.90
3657 4261 6.564557 AATTGGCATATTTTGGAGTCCAAT 57.435 33.333 25.12 13.92 43.55 3.16
3658 4262 6.098124 CCTAATTGGCATATTTTGGAGTCCAA 59.902 38.462 21.05 21.05 42.29 3.53
3659 4263 5.598005 CCTAATTGGCATATTTTGGAGTCCA 59.402 40.000 8.12 8.12 0.00 4.02
3660 4264 5.011023 CCCTAATTGGCATATTTTGGAGTCC 59.989 44.000 0.73 0.73 0.00 3.85
3661 4265 5.598417 ACCCTAATTGGCATATTTTGGAGTC 59.402 40.000 0.00 0.00 0.00 3.36
3662 4266 5.528337 ACCCTAATTGGCATATTTTGGAGT 58.472 37.500 0.00 0.00 0.00 3.85
3663 4267 5.011023 GGACCCTAATTGGCATATTTTGGAG 59.989 44.000 0.00 0.00 0.00 3.86
3664 4268 4.898861 GGACCCTAATTGGCATATTTTGGA 59.101 41.667 0.00 0.00 0.00 3.53
3667 4271 7.789349 AGTATTGGACCCTAATTGGCATATTTT 59.211 33.333 0.00 0.00 0.00 1.82
3673 4277 4.601406 AAGTATTGGACCCTAATTGGCA 57.399 40.909 0.00 0.00 0.00 4.92
3674 4278 5.186992 ACAAAAGTATTGGACCCTAATTGGC 59.813 40.000 0.00 0.00 0.00 4.52
3678 4282 5.186992 GGCAACAAAAGTATTGGACCCTAAT 59.813 40.000 0.00 0.00 0.00 1.73
3682 4286 2.028476 GGGCAACAAAAGTATTGGACCC 60.028 50.000 0.00 0.00 39.74 4.46
3687 4291 3.995705 CCATGTGGGCAACAAAAGTATTG 59.004 43.478 0.00 0.00 43.61 1.90
3688 4292 3.900601 TCCATGTGGGCAACAAAAGTATT 59.099 39.130 0.00 0.00 43.61 1.89
3700 4305 2.953821 CAACGTGTCCATGTGGGC 59.046 61.111 0.00 0.00 41.09 5.36
3702 4307 0.884259 TCAGCAACGTGTCCATGTGG 60.884 55.000 0.00 0.00 0.00 4.17
3703 4308 0.943673 TTCAGCAACGTGTCCATGTG 59.056 50.000 0.00 0.00 0.00 3.21
3707 4312 1.013596 CTTGTTCAGCAACGTGTCCA 58.986 50.000 0.00 0.00 34.95 4.02
3709 4314 2.221055 CCTACTTGTTCAGCAACGTGTC 59.779 50.000 0.00 0.00 34.95 3.67
3711 4316 1.069906 GCCTACTTGTTCAGCAACGTG 60.070 52.381 0.00 0.00 34.95 4.49
3714 4319 3.708563 TTTGCCTACTTGTTCAGCAAC 57.291 42.857 0.00 0.00 42.69 4.17
3717 4325 3.753272 TCAGATTTGCCTACTTGTTCAGC 59.247 43.478 0.00 0.00 0.00 4.26
3718 4326 4.756642 TGTCAGATTTGCCTACTTGTTCAG 59.243 41.667 0.00 0.00 0.00 3.02
3723 4331 4.631813 GGTAGTGTCAGATTTGCCTACTTG 59.368 45.833 0.00 0.00 0.00 3.16
3737 4345 3.696548 TGCACAAAAATGTGGTAGTGTCA 59.303 39.130 10.62 0.00 39.97 3.58
3739 4347 3.181480 GGTGCACAAAAATGTGGTAGTGT 60.181 43.478 20.43 0.00 39.97 3.55
3740 4348 3.380142 GGTGCACAAAAATGTGGTAGTG 58.620 45.455 20.43 0.00 39.97 2.74
3744 4365 1.198713 TGGGTGCACAAAAATGTGGT 58.801 45.000 20.43 0.00 39.97 4.16
3745 4366 2.547299 ATGGGTGCACAAAAATGTGG 57.453 45.000 20.43 0.00 39.97 4.17
3746 4367 4.517952 TCTATGGGTGCACAAAAATGTG 57.482 40.909 20.43 4.64 42.32 3.21
3751 4372 5.295950 CATGTTTTCTATGGGTGCACAAAA 58.704 37.500 20.43 12.36 0.00 2.44
3764 4385 6.833041 TGTTCAACTAGGACCATGTTTTCTA 58.167 36.000 0.00 0.00 0.00 2.10
3766 4387 5.562890 GCTGTTCAACTAGGACCATGTTTTC 60.563 44.000 0.00 0.00 0.00 2.29
3770 4391 2.290323 GGCTGTTCAACTAGGACCATGT 60.290 50.000 0.00 0.00 0.00 3.21
3771 4392 2.359900 GGCTGTTCAACTAGGACCATG 58.640 52.381 0.00 0.00 0.00 3.66
3772 4393 1.282157 GGGCTGTTCAACTAGGACCAT 59.718 52.381 0.00 0.00 0.00 3.55
3773 4394 0.690762 GGGCTGTTCAACTAGGACCA 59.309 55.000 0.00 0.00 0.00 4.02
3777 4405 1.004745 ACCATGGGCTGTTCAACTAGG 59.995 52.381 18.09 0.00 0.00 3.02
3781 4409 1.202348 GCTTACCATGGGCTGTTCAAC 59.798 52.381 18.09 0.00 0.00 3.18
3811 4439 1.886542 GGCCTAAAAAGGGACACTGTG 59.113 52.381 6.19 6.19 0.00 3.66
3815 4443 1.272490 GCAAGGCCTAAAAAGGGACAC 59.728 52.381 5.16 0.00 33.44 3.67
3816 4444 1.146982 AGCAAGGCCTAAAAAGGGACA 59.853 47.619 5.16 0.00 33.44 4.02
3817 4445 1.924731 AGCAAGGCCTAAAAAGGGAC 58.075 50.000 5.16 0.00 0.00 4.46
3821 4449 6.147656 CCATTGTTTAAGCAAGGCCTAAAAAG 59.852 38.462 5.16 0.00 28.25 2.27
3822 4450 5.994668 CCATTGTTTAAGCAAGGCCTAAAAA 59.005 36.000 5.16 0.00 28.25 1.94
3826 4454 3.773560 ACCATTGTTTAAGCAAGGCCTA 58.226 40.909 5.16 0.00 0.00 3.93
3827 4455 2.608623 ACCATTGTTTAAGCAAGGCCT 58.391 42.857 10.73 0.00 0.00 5.19
3828 4456 3.401033 AACCATTGTTTAAGCAAGGCC 57.599 42.857 10.73 0.00 0.00 5.19
3829 4457 5.385509 TCTAACCATTGTTTAAGCAAGGC 57.614 39.130 10.73 0.00 35.87 4.35
3830 4458 6.808212 CACATCTAACCATTGTTTAAGCAAGG 59.192 38.462 10.59 9.99 35.87 3.61
3832 4460 6.266558 ACCACATCTAACCATTGTTTAAGCAA 59.733 34.615 7.22 7.22 35.87 3.91
3846 4474 3.181510 GCCGTGATGAAACCACATCTAAC 60.182 47.826 0.00 0.00 44.61 2.34
3848 4476 2.027653 TGCCGTGATGAAACCACATCTA 60.028 45.455 0.00 0.00 44.61 1.98
3850 4478 1.164411 TGCCGTGATGAAACCACATC 58.836 50.000 0.00 0.00 44.58 3.06
3855 4483 0.521735 GGTCTTGCCGTGATGAAACC 59.478 55.000 0.00 0.00 0.00 3.27
3884 4524 4.716784 ACAGGAATAATCTAGGTCAGTGCA 59.283 41.667 0.00 0.00 0.00 4.57
3885 4525 5.283457 ACAGGAATAATCTAGGTCAGTGC 57.717 43.478 0.00 0.00 0.00 4.40
3886 4526 7.711339 GGTAAACAGGAATAATCTAGGTCAGTG 59.289 40.741 0.00 0.00 0.00 3.66
3887 4527 7.147532 GGGTAAACAGGAATAATCTAGGTCAGT 60.148 40.741 0.00 0.00 0.00 3.41
3888 4528 7.217906 GGGTAAACAGGAATAATCTAGGTCAG 58.782 42.308 0.00 0.00 0.00 3.51
3889 4529 6.183360 CGGGTAAACAGGAATAATCTAGGTCA 60.183 42.308 0.00 0.00 0.00 4.02
3909 4549 1.407712 GGCCATGCTTTTCTACGGGTA 60.408 52.381 0.00 0.00 0.00 3.69
3914 4554 3.206964 GTCTAGGGCCATGCTTTTCTAC 58.793 50.000 6.18 0.00 0.00 2.59
3923 4563 1.281867 TGTTCTTGGTCTAGGGCCATG 59.718 52.381 6.18 9.69 35.71 3.66
3932 4572 2.486472 CCATGAGCTGTTCTTGGTCT 57.514 50.000 15.41 0.00 43.05 3.85
3936 4576 1.402456 GCTTGCCATGAGCTGTTCTTG 60.402 52.381 0.00 1.20 44.23 3.02
3937 4577 0.886563 GCTTGCCATGAGCTGTTCTT 59.113 50.000 0.00 0.00 44.23 2.52
3938 4578 1.303799 CGCTTGCCATGAGCTGTTCT 61.304 55.000 0.00 0.00 44.23 3.01
3957 4597 6.691508 AGACAGGAATTTCTTATTTTGCCAC 58.308 36.000 0.00 0.00 0.00 5.01
3968 4608 7.456725 TGATTTCTCTGAAGACAGGAATTTCT 58.543 34.615 0.00 0.00 43.60 2.52
3969 4609 7.678947 TGATTTCTCTGAAGACAGGAATTTC 57.321 36.000 0.00 0.00 43.60 2.17
3976 4616 5.811613 GTCCTGATGATTTCTCTGAAGACAG 59.188 44.000 0.00 0.00 44.66 3.51
3977 4617 5.337894 GGTCCTGATGATTTCTCTGAAGACA 60.338 44.000 0.00 0.00 0.00 3.41
3978 4618 5.115480 GGTCCTGATGATTTCTCTGAAGAC 58.885 45.833 0.00 0.00 0.00 3.01
3979 4619 4.779489 TGGTCCTGATGATTTCTCTGAAGA 59.221 41.667 0.00 0.00 0.00 2.87
3980 4620 5.095145 TGGTCCTGATGATTTCTCTGAAG 57.905 43.478 0.00 0.00 0.00 3.02
3982 4622 4.779489 TCTTGGTCCTGATGATTTCTCTGA 59.221 41.667 0.00 0.00 0.00 3.27
3983 4623 5.095145 TCTTGGTCCTGATGATTTCTCTG 57.905 43.478 0.00 0.00 0.00 3.35
3984 4624 5.013495 TGTTCTTGGTCCTGATGATTTCTCT 59.987 40.000 0.00 0.00 0.00 3.10
3985 4625 5.123027 GTGTTCTTGGTCCTGATGATTTCTC 59.877 44.000 0.00 0.00 0.00 2.87
3997 4637 0.819259 TGCTGCAGTGTTCTTGGTCC 60.819 55.000 16.64 0.00 0.00 4.46
4011 4651 1.166129 CCATGATAGAGGCATGCTGC 58.834 55.000 18.92 9.91 41.30 5.25
4020 4677 3.889815 TGCTTCCCAAACCATGATAGAG 58.110 45.455 0.00 0.00 0.00 2.43
4021 4678 4.314522 TTGCTTCCCAAACCATGATAGA 57.685 40.909 0.00 0.00 0.00 1.98
4040 4697 0.031585 CATCTGCGGGGCATCAATTG 59.968 55.000 0.00 0.00 38.13 2.32
4041 4698 0.106569 TCATCTGCGGGGCATCAATT 60.107 50.000 0.00 0.00 38.13 2.32
4042 4699 0.820891 GTCATCTGCGGGGCATCAAT 60.821 55.000 0.00 0.00 38.13 2.57
4052 4709 5.551760 ACCTCTTAAAAATGTCATCTGCG 57.448 39.130 0.00 0.00 0.00 5.18
4070 4727 0.879090 CCGGCAACTGGTTTTACCTC 59.121 55.000 0.00 0.00 39.58 3.85
4071 4728 0.538746 CCCGGCAACTGGTTTTACCT 60.539 55.000 0.00 0.00 39.58 3.08
4073 4730 1.287815 GCCCGGCAACTGGTTTTAC 59.712 57.895 3.91 0.00 44.08 2.01
4093 4756 5.574188 GGAATCTATCCTGTGGGCATTTAT 58.426 41.667 0.00 0.00 45.56 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.