Multiple sequence alignment - TraesCS3A01G103900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G103900 chr3A 100.000 2276 0 0 1581 3856 67307904 67305629 0.000000e+00 4204.0
1 TraesCS3A01G103900 chr3A 100.000 1165 0 0 1 1165 67309484 67308320 0.000000e+00 2152.0
2 TraesCS3A01G103900 chr3A 93.137 102 7 0 32 133 521926759 521926658 2.400000e-32 150.0
3 TraesCS3A01G103900 chr3A 91.071 112 7 3 24 132 432857417 432857528 8.630000e-32 148.0
4 TraesCS3A01G103900 chr3A 92.233 103 7 1 28 130 572598442 572598543 1.120000e-30 145.0
5 TraesCS3A01G103900 chr3D 97.121 2188 61 2 1670 3856 58296990 58294804 0.000000e+00 3690.0
6 TraesCS3A01G103900 chr3D 91.429 315 21 4 790 1100 58297636 58297324 9.900000e-116 427.0
7 TraesCS3A01G103900 chr3B 93.308 2092 104 25 1581 3665 92125349 92123287 0.000000e+00 3055.0
8 TraesCS3A01G103900 chr3B 93.333 360 19 5 792 1148 92126095 92125738 9.490000e-146 527.0
9 TraesCS3A01G103900 chr5A 77.966 295 49 15 127 414 343626054 343626339 1.840000e-38 171.0
10 TraesCS3A01G103900 chr2B 77.441 297 58 8 128 422 714726732 714727021 6.630000e-38 169.0
11 TraesCS3A01G103900 chr2A 92.661 109 6 2 26 134 446668157 446668263 5.160000e-34 156.0
12 TraesCS3A01G103900 chr6B 94.898 98 5 0 33 130 613115958 613115861 1.860000e-33 154.0
13 TraesCS3A01G103900 chr6B 92.381 105 8 0 33 137 95757268 95757372 2.400000e-32 150.0
14 TraesCS3A01G103900 chr7A 92.381 105 7 1 28 132 641450305 641450202 8.630000e-32 148.0
15 TraesCS3A01G103900 chr4D 92.308 104 8 0 26 129 29863937 29863834 8.630000e-32 148.0
16 TraesCS3A01G103900 chr4D 74.809 262 55 11 127 383 322804530 322804275 1.460000e-19 108.0
17 TraesCS3A01G103900 chr6A 91.509 106 9 0 32 137 600701751 600701856 3.100000e-31 147.0
18 TraesCS3A01G103900 chr6D 76.761 284 50 12 136 414 465509102 465508830 1.120000e-30 145.0
19 TraesCS3A01G103900 chr2D 80.556 144 23 4 127 266 22279263 22279405 5.270000e-19 106.0
20 TraesCS3A01G103900 chrUn 78.873 142 25 4 127 264 12747360 12747500 1.480000e-14 91.6
21 TraesCS3A01G103900 chrUn 78.873 142 25 4 127 264 203458354 203458494 1.480000e-14 91.6
22 TraesCS3A01G103900 chrUn 78.873 142 25 4 127 264 227688740 227688600 1.480000e-14 91.6
23 TraesCS3A01G103900 chrUn 78.169 142 26 4 127 264 203480472 203480612 6.860000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G103900 chr3A 67305629 67309484 3855 True 3178.0 4204 100.0000 1 3856 2 chr3A.!!$R2 3855
1 TraesCS3A01G103900 chr3D 58294804 58297636 2832 True 2058.5 3690 94.2750 790 3856 2 chr3D.!!$R1 3066
2 TraesCS3A01G103900 chr3B 92123287 92126095 2808 True 1791.0 3055 93.3205 792 3665 2 chr3B.!!$R1 2873

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
556 557 0.028374 CGCCAACCGTTTCTCGTTTT 59.972 50.0 0.0 0.00 37.94 2.43 F
859 864 0.033920 GGCTTTGACTGGCCCAAAAG 59.966 55.0 0.0 6.24 42.30 2.27 F
2219 2602 0.545171 CTGATGACCCAGCCATCACT 59.455 55.0 0.0 0.00 43.67 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1580 1963 0.105913 GGAGGAGGTAGGAGGTGGAG 60.106 65.000 0.00 0.0 0.00 3.86 R
2435 2818 1.071471 CGGGGATACACCATCTGGC 59.929 63.158 0.00 0.0 41.20 4.85 R
3466 3855 2.352651 CACATGTGTTTATGGAGGAGCG 59.647 50.000 18.03 0.0 32.32 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.249035 ACAACCAGTACCATTAAAATCACG 57.751 37.500 0.00 0.00 0.00 4.35
24 25 5.998981 ACAACCAGTACCATTAAAATCACGA 59.001 36.000 0.00 0.00 0.00 4.35
25 26 6.657541 ACAACCAGTACCATTAAAATCACGAT 59.342 34.615 0.00 0.00 0.00 3.73
26 27 7.825270 ACAACCAGTACCATTAAAATCACGATA 59.175 33.333 0.00 0.00 0.00 2.92
27 28 7.781548 ACCAGTACCATTAAAATCACGATAC 57.218 36.000 0.00 0.00 0.00 2.24
28 29 7.332557 ACCAGTACCATTAAAATCACGATACA 58.667 34.615 0.00 0.00 0.00 2.29
29 30 7.825270 ACCAGTACCATTAAAATCACGATACAA 59.175 33.333 0.00 0.00 0.00 2.41
30 31 8.335356 CCAGTACCATTAAAATCACGATACAAG 58.665 37.037 0.00 0.00 0.00 3.16
31 32 8.335356 CAGTACCATTAAAATCACGATACAAGG 58.665 37.037 0.00 0.00 0.00 3.61
32 33 8.044908 AGTACCATTAAAATCACGATACAAGGT 58.955 33.333 0.00 0.00 0.00 3.50
33 34 9.316730 GTACCATTAAAATCACGATACAAGGTA 57.683 33.333 0.00 0.00 0.00 3.08
34 35 8.205131 ACCATTAAAATCACGATACAAGGTAC 57.795 34.615 0.00 0.00 0.00 3.34
36 37 8.548721 CCATTAAAATCACGATACAAGGTACTC 58.451 37.037 0.00 0.00 38.49 2.59
37 38 8.548721 CATTAAAATCACGATACAAGGTACTCC 58.451 37.037 0.00 0.00 38.49 3.85
38 39 4.667519 AATCACGATACAAGGTACTCCC 57.332 45.455 0.00 0.00 38.49 4.30
40 41 3.285484 TCACGATACAAGGTACTCCCTC 58.715 50.000 0.00 0.00 45.47 4.30
41 42 2.361438 CACGATACAAGGTACTCCCTCC 59.639 54.545 0.00 0.00 45.47 4.30
42 43 1.607628 CGATACAAGGTACTCCCTCCG 59.392 57.143 0.00 0.00 45.47 4.63
43 44 2.664015 GATACAAGGTACTCCCTCCGT 58.336 52.381 0.00 0.00 45.47 4.69
44 45 2.610438 TACAAGGTACTCCCTCCGTT 57.390 50.000 0.00 0.00 45.47 4.44
45 46 1.725803 ACAAGGTACTCCCTCCGTTT 58.274 50.000 0.00 0.00 45.47 3.60
46 47 1.622312 ACAAGGTACTCCCTCCGTTTC 59.378 52.381 0.00 0.00 45.47 2.78
47 48 0.893447 AAGGTACTCCCTCCGTTTCG 59.107 55.000 0.00 0.00 45.47 3.46
48 49 0.038744 AGGTACTCCCTCCGTTTCGA 59.961 55.000 0.00 0.00 40.71 3.71
49 50 0.890683 GGTACTCCCTCCGTTTCGAA 59.109 55.000 0.00 0.00 0.00 3.71
50 51 1.273327 GGTACTCCCTCCGTTTCGAAA 59.727 52.381 6.47 6.47 0.00 3.46
51 52 2.093816 GGTACTCCCTCCGTTTCGAAAT 60.094 50.000 14.69 0.00 0.00 2.17
52 53 3.131046 GGTACTCCCTCCGTTTCGAAATA 59.869 47.826 14.69 2.29 0.00 1.40
53 54 3.521947 ACTCCCTCCGTTTCGAAATAG 57.478 47.619 14.69 11.17 0.00 1.73
54 55 3.094572 ACTCCCTCCGTTTCGAAATAGA 58.905 45.455 14.69 12.51 0.00 1.98
55 56 3.705072 ACTCCCTCCGTTTCGAAATAGAT 59.295 43.478 14.69 0.00 0.00 1.98
56 57 4.051922 CTCCCTCCGTTTCGAAATAGATG 58.948 47.826 14.69 10.38 0.00 2.90
57 58 3.702548 TCCCTCCGTTTCGAAATAGATGA 59.297 43.478 14.69 10.14 0.00 2.92
58 59 3.802685 CCCTCCGTTTCGAAATAGATGAC 59.197 47.826 14.69 0.00 0.00 3.06
59 60 4.441634 CCCTCCGTTTCGAAATAGATGACT 60.442 45.833 14.69 0.00 0.00 3.41
60 61 4.740695 CCTCCGTTTCGAAATAGATGACTC 59.259 45.833 14.69 0.00 0.00 3.36
61 62 5.319140 TCCGTTTCGAAATAGATGACTCA 57.681 39.130 14.69 0.00 0.00 3.41
62 63 5.716094 TCCGTTTCGAAATAGATGACTCAA 58.284 37.500 14.69 0.00 0.00 3.02
63 64 5.575606 TCCGTTTCGAAATAGATGACTCAAC 59.424 40.000 14.69 0.00 0.00 3.18
64 65 5.577164 CCGTTTCGAAATAGATGACTCAACT 59.423 40.000 14.69 0.00 0.00 3.16
65 66 6.090898 CCGTTTCGAAATAGATGACTCAACTT 59.909 38.462 14.69 0.00 0.00 2.66
66 67 7.360101 CCGTTTCGAAATAGATGACTCAACTTT 60.360 37.037 14.69 0.00 0.00 2.66
67 68 7.475565 CGTTTCGAAATAGATGACTCAACTTTG 59.524 37.037 14.69 0.00 0.00 2.77
68 69 7.962964 TTCGAAATAGATGACTCAACTTTGT 57.037 32.000 0.00 0.00 0.00 2.83
69 70 9.483916 TTTCGAAATAGATGACTCAACTTTGTA 57.516 29.630 6.47 0.00 0.00 2.41
70 71 8.462143 TCGAAATAGATGACTCAACTTTGTAC 57.538 34.615 0.00 0.00 0.00 2.90
71 72 8.304596 TCGAAATAGATGACTCAACTTTGTACT 58.695 33.333 0.00 0.00 0.00 2.73
72 73 9.569167 CGAAATAGATGACTCAACTTTGTACTA 57.431 33.333 0.00 0.00 0.00 1.82
104 105 9.623000 AGTACAAAGTTACTACAAAGTTGGATT 57.377 29.630 0.00 0.00 37.15 3.01
122 123 9.765795 AGTTGGATTATCTATTTTAGAACGGAG 57.234 33.333 0.00 0.00 38.50 4.63
123 124 8.989980 GTTGGATTATCTATTTTAGAACGGAGG 58.010 37.037 0.00 0.00 38.50 4.30
124 125 7.676947 TGGATTATCTATTTTAGAACGGAGGG 58.323 38.462 0.00 0.00 38.50 4.30
125 126 7.511371 TGGATTATCTATTTTAGAACGGAGGGA 59.489 37.037 0.00 0.00 38.50 4.20
126 127 8.035984 GGATTATCTATTTTAGAACGGAGGGAG 58.964 40.741 0.00 0.00 38.50 4.30
127 128 7.909485 TTATCTATTTTAGAACGGAGGGAGT 57.091 36.000 0.00 0.00 38.50 3.85
128 129 9.597681 ATTATCTATTTTAGAACGGAGGGAGTA 57.402 33.333 0.00 0.00 38.50 2.59
129 130 7.909485 ATCTATTTTAGAACGGAGGGAGTAA 57.091 36.000 0.00 0.00 38.50 2.24
130 131 7.909485 TCTATTTTAGAACGGAGGGAGTAAT 57.091 36.000 0.00 0.00 0.00 1.89
131 132 8.315220 TCTATTTTAGAACGGAGGGAGTAATT 57.685 34.615 0.00 0.00 0.00 1.40
132 133 8.202137 TCTATTTTAGAACGGAGGGAGTAATTG 58.798 37.037 0.00 0.00 0.00 2.32
133 134 6.363167 TTTTAGAACGGAGGGAGTAATTGA 57.637 37.500 0.00 0.00 0.00 2.57
134 135 6.555463 TTTAGAACGGAGGGAGTAATTGAT 57.445 37.500 0.00 0.00 0.00 2.57
135 136 7.664552 TTTAGAACGGAGGGAGTAATTGATA 57.335 36.000 0.00 0.00 0.00 2.15
136 137 7.850935 TTAGAACGGAGGGAGTAATTGATAT 57.149 36.000 0.00 0.00 0.00 1.63
137 138 6.749036 AGAACGGAGGGAGTAATTGATATT 57.251 37.500 0.00 0.00 0.00 1.28
138 139 7.850935 AGAACGGAGGGAGTAATTGATATTA 57.149 36.000 0.00 0.00 0.00 0.98
139 140 8.437274 AGAACGGAGGGAGTAATTGATATTAT 57.563 34.615 0.00 0.00 0.00 1.28
140 141 8.532819 AGAACGGAGGGAGTAATTGATATTATC 58.467 37.037 0.00 0.00 0.00 1.75
141 142 7.792364 ACGGAGGGAGTAATTGATATTATCA 57.208 36.000 2.14 2.14 37.55 2.15
142 143 8.380742 ACGGAGGGAGTAATTGATATTATCAT 57.619 34.615 7.19 0.00 39.39 2.45
143 144 8.478877 ACGGAGGGAGTAATTGATATTATCATC 58.521 37.037 7.19 2.15 39.39 2.92
144 145 7.649705 CGGAGGGAGTAATTGATATTATCATCG 59.350 40.741 7.19 0.00 39.39 3.84
145 146 7.439655 GGAGGGAGTAATTGATATTATCATCGC 59.560 40.741 7.19 9.38 39.39 4.58
146 147 7.851228 AGGGAGTAATTGATATTATCATCGCA 58.149 34.615 16.90 2.57 39.39 5.10
147 148 7.766278 AGGGAGTAATTGATATTATCATCGCAC 59.234 37.037 16.90 9.98 39.39 5.34
148 149 7.766278 GGGAGTAATTGATATTATCATCGCACT 59.234 37.037 7.19 8.29 39.39 4.40
149 150 8.598924 GGAGTAATTGATATTATCATCGCACTG 58.401 37.037 7.19 0.00 39.39 3.66
150 151 8.484641 AGTAATTGATATTATCATCGCACTGG 57.515 34.615 7.19 0.00 39.39 4.00
151 152 5.808042 ATTGATATTATCATCGCACTGGC 57.192 39.130 7.19 0.00 39.39 4.85
152 153 4.270245 TGATATTATCATCGCACTGGCA 57.730 40.909 2.14 0.00 35.25 4.92
153 154 3.996363 TGATATTATCATCGCACTGGCAC 59.004 43.478 2.14 0.00 35.25 5.01
154 155 2.330440 ATTATCATCGCACTGGCACA 57.670 45.000 0.00 0.00 41.24 4.57
155 156 1.368641 TTATCATCGCACTGGCACAC 58.631 50.000 0.00 0.00 41.24 3.82
156 157 0.536724 TATCATCGCACTGGCACACT 59.463 50.000 0.00 0.00 41.24 3.55
157 158 0.321919 ATCATCGCACTGGCACACTT 60.322 50.000 0.00 0.00 41.24 3.16
158 159 1.208358 CATCGCACTGGCACACTTG 59.792 57.895 0.00 0.00 41.24 3.16
159 160 1.071299 ATCGCACTGGCACACTTGA 59.929 52.632 0.00 0.00 41.24 3.02
160 161 0.321919 ATCGCACTGGCACACTTGAT 60.322 50.000 0.00 0.00 41.24 2.57
161 162 1.208358 CGCACTGGCACACTTGATG 59.792 57.895 0.00 0.00 41.24 3.07
162 163 1.509644 CGCACTGGCACACTTGATGT 61.510 55.000 0.00 0.00 44.81 3.06
163 164 1.522668 GCACTGGCACACTTGATGTA 58.477 50.000 0.00 0.00 40.64 2.29
164 165 1.197721 GCACTGGCACACTTGATGTAC 59.802 52.381 0.00 0.00 40.64 2.90
165 166 2.493035 CACTGGCACACTTGATGTACA 58.507 47.619 0.00 0.00 40.64 2.90
166 167 2.224079 CACTGGCACACTTGATGTACAC 59.776 50.000 0.00 0.00 40.64 2.90
167 168 1.806542 CTGGCACACTTGATGTACACC 59.193 52.381 0.00 0.00 40.64 4.16
168 169 1.141858 TGGCACACTTGATGTACACCA 59.858 47.619 0.00 0.00 40.64 4.17
169 170 2.224744 TGGCACACTTGATGTACACCAT 60.225 45.455 0.00 0.00 40.64 3.55
170 171 2.162208 GGCACACTTGATGTACACCATG 59.838 50.000 0.00 0.00 40.64 3.66
171 172 3.073678 GCACACTTGATGTACACCATGA 58.926 45.455 10.00 0.00 40.64 3.07
172 173 3.691118 GCACACTTGATGTACACCATGAT 59.309 43.478 10.00 0.00 40.64 2.45
173 174 4.201851 GCACACTTGATGTACACCATGATC 60.202 45.833 10.00 0.00 40.64 2.92
174 175 5.181009 CACACTTGATGTACACCATGATCT 58.819 41.667 10.00 0.00 40.64 2.75
175 176 5.064325 CACACTTGATGTACACCATGATCTG 59.936 44.000 10.00 1.10 40.64 2.90
176 177 5.859300 ACACTTGATGTACACCATGATCTGG 60.859 44.000 10.00 9.01 45.51 3.86
177 178 7.988822 ACACTTGATGTACACCATGATCTGGA 61.989 42.308 10.00 0.00 43.80 3.86
178 179 9.374750 ACACTTGATGTACACCATGATCTGGAA 62.375 40.741 10.00 1.69 43.80 3.53
190 191 6.279227 CATGATCTGGAATTTACTCGTGTC 57.721 41.667 0.00 0.00 0.00 3.67
191 192 5.661056 TGATCTGGAATTTACTCGTGTCT 57.339 39.130 0.00 0.00 0.00 3.41
192 193 6.769134 TGATCTGGAATTTACTCGTGTCTA 57.231 37.500 0.00 0.00 0.00 2.59
193 194 7.165460 TGATCTGGAATTTACTCGTGTCTAA 57.835 36.000 0.00 0.00 0.00 2.10
194 195 7.782049 TGATCTGGAATTTACTCGTGTCTAAT 58.218 34.615 0.00 0.00 0.00 1.73
195 196 7.921214 TGATCTGGAATTTACTCGTGTCTAATC 59.079 37.037 0.00 0.00 0.00 1.75
196 197 7.406031 TCTGGAATTTACTCGTGTCTAATCT 57.594 36.000 0.00 0.00 0.00 2.40
197 198 7.481642 TCTGGAATTTACTCGTGTCTAATCTC 58.518 38.462 0.00 0.00 0.00 2.75
198 199 7.339721 TCTGGAATTTACTCGTGTCTAATCTCT 59.660 37.037 0.00 0.00 0.00 3.10
199 200 7.481642 TGGAATTTACTCGTGTCTAATCTCTC 58.518 38.462 0.00 0.00 0.00 3.20
200 201 7.339721 TGGAATTTACTCGTGTCTAATCTCTCT 59.660 37.037 0.00 0.00 0.00 3.10
201 202 8.838365 GGAATTTACTCGTGTCTAATCTCTCTA 58.162 37.037 0.00 0.00 0.00 2.43
202 203 9.654417 GAATTTACTCGTGTCTAATCTCTCTAC 57.346 37.037 0.00 0.00 0.00 2.59
203 204 8.967664 ATTTACTCGTGTCTAATCTCTCTACT 57.032 34.615 0.00 0.00 0.00 2.57
204 205 7.773864 TTACTCGTGTCTAATCTCTCTACTG 57.226 40.000 0.00 0.00 0.00 2.74
205 206 5.736813 ACTCGTGTCTAATCTCTCTACTGT 58.263 41.667 0.00 0.00 0.00 3.55
206 207 6.876155 ACTCGTGTCTAATCTCTCTACTGTA 58.124 40.000 0.00 0.00 0.00 2.74
207 208 6.982141 ACTCGTGTCTAATCTCTCTACTGTAG 59.018 42.308 8.55 8.55 0.00 2.74
208 209 6.282167 TCGTGTCTAATCTCTCTACTGTAGG 58.718 44.000 14.47 6.07 0.00 3.18
209 210 6.097981 TCGTGTCTAATCTCTCTACTGTAGGA 59.902 42.308 14.47 9.68 0.00 2.94
210 211 6.762187 CGTGTCTAATCTCTCTACTGTAGGAA 59.238 42.308 14.47 2.98 0.00 3.36
211 212 7.280428 CGTGTCTAATCTCTCTACTGTAGGAAA 59.720 40.741 14.47 0.00 0.00 3.13
212 213 9.127277 GTGTCTAATCTCTCTACTGTAGGAAAT 57.873 37.037 14.47 1.51 0.00 2.17
213 214 9.344772 TGTCTAATCTCTCTACTGTAGGAAATC 57.655 37.037 14.47 0.00 0.00 2.17
214 215 9.344772 GTCTAATCTCTCTACTGTAGGAAATCA 57.655 37.037 14.47 0.00 0.00 2.57
215 216 9.344772 TCTAATCTCTCTACTGTAGGAAATCAC 57.655 37.037 14.47 0.00 0.00 3.06
216 217 9.349713 CTAATCTCTCTACTGTAGGAAATCACT 57.650 37.037 14.47 0.00 0.00 3.41
217 218 8.602472 AATCTCTCTACTGTAGGAAATCACTT 57.398 34.615 14.47 0.00 0.00 3.16
218 219 8.602472 ATCTCTCTACTGTAGGAAATCACTTT 57.398 34.615 14.47 0.00 0.00 2.66
219 220 8.423906 TCTCTCTACTGTAGGAAATCACTTTT 57.576 34.615 14.47 0.00 0.00 2.27
220 221 9.529823 TCTCTCTACTGTAGGAAATCACTTTTA 57.470 33.333 14.47 0.00 0.00 1.52
221 222 9.575783 CTCTCTACTGTAGGAAATCACTTTTAC 57.424 37.037 14.47 0.00 0.00 2.01
222 223 9.310449 TCTCTACTGTAGGAAATCACTTTTACT 57.690 33.333 14.47 0.00 41.56 2.24
223 224 9.930693 CTCTACTGTAGGAAATCACTTTTACTT 57.069 33.333 14.47 0.00 39.34 2.24
224 225 9.924650 TCTACTGTAGGAAATCACTTTTACTTC 57.075 33.333 14.47 0.00 39.34 3.01
225 226 7.981102 ACTGTAGGAAATCACTTTTACTTCC 57.019 36.000 0.00 0.00 39.34 3.46
226 227 7.514721 ACTGTAGGAAATCACTTTTACTTCCA 58.485 34.615 2.28 0.00 39.34 3.53
227 228 7.661847 ACTGTAGGAAATCACTTTTACTTCCAG 59.338 37.037 2.28 7.55 39.34 3.86
228 229 7.514721 TGTAGGAAATCACTTTTACTTCCAGT 58.485 34.615 2.28 0.00 39.34 4.00
229 230 7.660208 TGTAGGAAATCACTTTTACTTCCAGTC 59.340 37.037 2.28 0.00 39.34 3.51
230 231 6.842676 AGGAAATCACTTTTACTTCCAGTCT 58.157 36.000 2.28 0.00 34.65 3.24
231 232 7.290813 AGGAAATCACTTTTACTTCCAGTCTT 58.709 34.615 2.28 0.00 34.65 3.01
232 233 7.780271 AGGAAATCACTTTTACTTCCAGTCTTT 59.220 33.333 2.28 0.00 34.65 2.52
233 234 8.414003 GGAAATCACTTTTACTTCCAGTCTTTT 58.586 33.333 0.00 0.00 36.39 2.27
272 273 6.792326 ACTTTAAAGTTGTTGTTACTCCTGC 58.208 36.000 15.22 0.00 35.21 4.85
273 274 6.602009 ACTTTAAAGTTGTTGTTACTCCTGCT 59.398 34.615 15.22 0.00 35.21 4.24
274 275 7.122204 ACTTTAAAGTTGTTGTTACTCCTGCTT 59.878 33.333 15.22 0.00 35.21 3.91
275 276 5.500645 AAAGTTGTTGTTACTCCTGCTTC 57.499 39.130 0.00 0.00 0.00 3.86
276 277 4.423625 AGTTGTTGTTACTCCTGCTTCT 57.576 40.909 0.00 0.00 0.00 2.85
277 278 5.546621 AGTTGTTGTTACTCCTGCTTCTA 57.453 39.130 0.00 0.00 0.00 2.10
278 279 5.298347 AGTTGTTGTTACTCCTGCTTCTAC 58.702 41.667 0.00 0.00 0.00 2.59
279 280 4.948341 TGTTGTTACTCCTGCTTCTACA 57.052 40.909 0.00 0.00 0.00 2.74
280 281 5.284861 TGTTGTTACTCCTGCTTCTACAA 57.715 39.130 0.00 0.00 0.00 2.41
281 282 5.865085 TGTTGTTACTCCTGCTTCTACAAT 58.135 37.500 0.00 0.00 0.00 2.71
282 283 5.932303 TGTTGTTACTCCTGCTTCTACAATC 59.068 40.000 0.00 0.00 0.00 2.67
283 284 5.738619 TGTTACTCCTGCTTCTACAATCA 57.261 39.130 0.00 0.00 0.00 2.57
284 285 6.109156 TGTTACTCCTGCTTCTACAATCAA 57.891 37.500 0.00 0.00 0.00 2.57
285 286 6.711277 TGTTACTCCTGCTTCTACAATCAAT 58.289 36.000 0.00 0.00 0.00 2.57
286 287 6.818644 TGTTACTCCTGCTTCTACAATCAATC 59.181 38.462 0.00 0.00 0.00 2.67
287 288 5.426689 ACTCCTGCTTCTACAATCAATCA 57.573 39.130 0.00 0.00 0.00 2.57
288 289 5.999044 ACTCCTGCTTCTACAATCAATCAT 58.001 37.500 0.00 0.00 0.00 2.45
289 290 6.421485 ACTCCTGCTTCTACAATCAATCATT 58.579 36.000 0.00 0.00 0.00 2.57
290 291 6.888632 ACTCCTGCTTCTACAATCAATCATTT 59.111 34.615 0.00 0.00 0.00 2.32
291 292 7.395489 ACTCCTGCTTCTACAATCAATCATTTT 59.605 33.333 0.00 0.00 0.00 1.82
292 293 8.125978 TCCTGCTTCTACAATCAATCATTTTT 57.874 30.769 0.00 0.00 0.00 1.94
293 294 9.241919 TCCTGCTTCTACAATCAATCATTTTTA 57.758 29.630 0.00 0.00 0.00 1.52
294 295 9.294030 CCTGCTTCTACAATCAATCATTTTTAC 57.706 33.333 0.00 0.00 0.00 2.01
295 296 9.294030 CTGCTTCTACAATCAATCATTTTTACC 57.706 33.333 0.00 0.00 0.00 2.85
296 297 8.801299 TGCTTCTACAATCAATCATTTTTACCA 58.199 29.630 0.00 0.00 0.00 3.25
297 298 9.807649 GCTTCTACAATCAATCATTTTTACCAT 57.192 29.630 0.00 0.00 0.00 3.55
315 316 9.619316 TTTTACCATTCTGATACATTTGTTTCG 57.381 29.630 0.00 0.00 0.00 3.46
316 317 5.640732 ACCATTCTGATACATTTGTTTCGC 58.359 37.500 0.00 0.00 0.00 4.70
317 318 4.730042 CCATTCTGATACATTTGTTTCGCG 59.270 41.667 0.00 0.00 0.00 5.87
318 319 4.335082 TTCTGATACATTTGTTTCGCGG 57.665 40.909 6.13 0.00 0.00 6.46
319 320 3.591023 TCTGATACATTTGTTTCGCGGA 58.409 40.909 6.13 0.00 0.00 5.54
320 321 3.369756 TCTGATACATTTGTTTCGCGGAC 59.630 43.478 6.13 6.42 0.00 4.79
321 322 3.067833 TGATACATTTGTTTCGCGGACA 58.932 40.909 6.13 9.37 0.00 4.02
322 323 3.498777 TGATACATTTGTTTCGCGGACAA 59.501 39.130 19.97 19.97 35.36 3.18
323 324 4.155099 TGATACATTTGTTTCGCGGACAAT 59.845 37.500 22.91 14.34 36.92 2.71
324 325 5.351740 TGATACATTTGTTTCGCGGACAATA 59.648 36.000 22.91 15.61 36.92 1.90
325 326 4.491234 ACATTTGTTTCGCGGACAATAA 57.509 36.364 22.91 13.59 36.92 1.40
326 327 5.054390 ACATTTGTTTCGCGGACAATAAT 57.946 34.783 22.91 14.86 36.92 1.28
327 328 6.184580 ACATTTGTTTCGCGGACAATAATA 57.815 33.333 22.91 12.77 36.92 0.98
328 329 6.025280 ACATTTGTTTCGCGGACAATAATAC 58.975 36.000 22.91 3.33 36.92 1.89
329 330 5.866335 TTTGTTTCGCGGACAATAATACT 57.134 34.783 22.91 0.00 36.92 2.12
330 331 4.850859 TGTTTCGCGGACAATAATACTG 57.149 40.909 6.13 0.00 0.00 2.74
331 332 4.247258 TGTTTCGCGGACAATAATACTGT 58.753 39.130 6.13 0.00 0.00 3.55
332 333 4.327898 TGTTTCGCGGACAATAATACTGTC 59.672 41.667 6.13 0.00 42.08 3.51
333 334 4.380841 TTCGCGGACAATAATACTGTCT 57.619 40.909 6.13 0.00 42.38 3.41
338 339 4.682787 CGGACAATAATACTGTCTGCAGA 58.317 43.478 13.74 13.74 45.28 4.26
339 340 5.292765 CGGACAATAATACTGTCTGCAGAT 58.707 41.667 21.47 6.62 45.28 2.90
340 341 5.755375 CGGACAATAATACTGTCTGCAGATT 59.245 40.000 21.47 12.15 45.28 2.40
341 342 6.074088 CGGACAATAATACTGTCTGCAGATTC 60.074 42.308 21.47 8.66 45.28 2.52
342 343 6.989169 GGACAATAATACTGTCTGCAGATTCT 59.011 38.462 21.47 7.43 45.28 2.40
343 344 7.170658 GGACAATAATACTGTCTGCAGATTCTC 59.829 40.741 21.47 7.44 45.28 2.87
344 345 7.559486 ACAATAATACTGTCTGCAGATTCTCA 58.441 34.615 21.47 12.07 45.28 3.27
345 346 8.043113 ACAATAATACTGTCTGCAGATTCTCAA 58.957 33.333 21.47 4.34 45.28 3.02
346 347 8.886719 CAATAATACTGTCTGCAGATTCTCAAA 58.113 33.333 21.47 4.70 45.28 2.69
347 348 6.734104 AATACTGTCTGCAGATTCTCAAAC 57.266 37.500 21.47 5.27 45.28 2.93
348 349 4.077300 ACTGTCTGCAGATTCTCAAACA 57.923 40.909 21.47 9.99 45.28 2.83
349 350 4.454678 ACTGTCTGCAGATTCTCAAACAA 58.545 39.130 21.47 0.00 45.28 2.83
350 351 5.068636 ACTGTCTGCAGATTCTCAAACAAT 58.931 37.500 21.47 0.00 45.28 2.71
351 352 5.533903 ACTGTCTGCAGATTCTCAAACAATT 59.466 36.000 21.47 0.00 45.28 2.32
352 353 6.712095 ACTGTCTGCAGATTCTCAAACAATTA 59.288 34.615 21.47 0.00 45.28 1.40
353 354 6.902341 TGTCTGCAGATTCTCAAACAATTAC 58.098 36.000 21.47 1.74 0.00 1.89
354 355 6.712095 TGTCTGCAGATTCTCAAACAATTACT 59.288 34.615 21.47 0.00 0.00 2.24
355 356 7.229306 TGTCTGCAGATTCTCAAACAATTACTT 59.771 33.333 21.47 0.00 0.00 2.24
356 357 7.748241 GTCTGCAGATTCTCAAACAATTACTTC 59.252 37.037 21.47 0.00 0.00 3.01
357 358 7.445096 TCTGCAGATTCTCAAACAATTACTTCA 59.555 33.333 13.74 0.00 0.00 3.02
358 359 7.362662 TGCAGATTCTCAAACAATTACTTCAC 58.637 34.615 0.00 0.00 0.00 3.18
359 360 7.013178 TGCAGATTCTCAAACAATTACTTCACA 59.987 33.333 0.00 0.00 0.00 3.58
360 361 7.324616 GCAGATTCTCAAACAATTACTTCACAC 59.675 37.037 0.00 0.00 0.00 3.82
361 362 8.344831 CAGATTCTCAAACAATTACTTCACACA 58.655 33.333 0.00 0.00 0.00 3.72
362 363 8.902806 AGATTCTCAAACAATTACTTCACACAA 58.097 29.630 0.00 0.00 0.00 3.33
363 364 9.173939 GATTCTCAAACAATTACTTCACACAAG 57.826 33.333 0.00 0.00 0.00 3.16
364 365 7.857734 TCTCAAACAATTACTTCACACAAGA 57.142 32.000 0.00 0.00 0.00 3.02
365 366 7.919690 TCTCAAACAATTACTTCACACAAGAG 58.080 34.615 0.00 0.00 0.00 2.85
366 367 6.494842 TCAAACAATTACTTCACACAAGAGC 58.505 36.000 0.00 0.00 0.00 4.09
367 368 6.318648 TCAAACAATTACTTCACACAAGAGCT 59.681 34.615 0.00 0.00 0.00 4.09
368 369 5.931441 ACAATTACTTCACACAAGAGCTC 57.069 39.130 5.27 5.27 0.00 4.09
369 370 5.615289 ACAATTACTTCACACAAGAGCTCT 58.385 37.500 11.45 11.45 0.00 4.09
370 371 6.058183 ACAATTACTTCACACAAGAGCTCTT 58.942 36.000 23.49 23.49 36.45 2.85
380 381 2.996155 CAAGAGCTCTTGCAACTTGTG 58.004 47.619 36.46 16.34 45.59 3.33
381 382 2.338577 AGAGCTCTTGCAACTTGTGT 57.661 45.000 11.45 0.00 42.74 3.72
382 383 1.945394 AGAGCTCTTGCAACTTGTGTG 59.055 47.619 11.45 0.00 42.74 3.82
383 384 1.672881 GAGCTCTTGCAACTTGTGTGT 59.327 47.619 6.43 0.00 42.74 3.72
384 385 1.402968 AGCTCTTGCAACTTGTGTGTG 59.597 47.619 0.00 0.00 42.74 3.82
385 386 1.401552 GCTCTTGCAACTTGTGTGTGA 59.598 47.619 0.00 0.00 39.41 3.58
386 387 2.792542 GCTCTTGCAACTTGTGTGTGAC 60.793 50.000 0.00 0.00 39.41 3.67
387 388 1.742831 TCTTGCAACTTGTGTGTGACC 59.257 47.619 0.00 0.00 0.00 4.02
388 389 0.449786 TTGCAACTTGTGTGTGACCG 59.550 50.000 0.00 0.00 0.00 4.79
389 390 1.355210 GCAACTTGTGTGTGACCGG 59.645 57.895 0.00 0.00 0.00 5.28
390 391 1.092921 GCAACTTGTGTGTGACCGGA 61.093 55.000 9.46 0.00 0.00 5.14
391 392 1.374560 CAACTTGTGTGTGACCGGAA 58.625 50.000 9.46 0.00 0.00 4.30
392 393 1.063469 CAACTTGTGTGTGACCGGAAC 59.937 52.381 9.46 6.80 0.00 3.62
410 411 5.813080 GGAACGCCACACTTAAATATTCT 57.187 39.130 0.00 0.00 0.00 2.40
411 412 5.807344 GGAACGCCACACTTAAATATTCTC 58.193 41.667 0.00 0.00 0.00 2.87
412 413 5.220796 GGAACGCCACACTTAAATATTCTCC 60.221 44.000 0.00 0.00 0.00 3.71
413 414 5.099042 ACGCCACACTTAAATATTCTCCT 57.901 39.130 0.00 0.00 0.00 3.69
414 415 4.876107 ACGCCACACTTAAATATTCTCCTG 59.124 41.667 0.00 0.00 0.00 3.86
415 416 4.260784 CGCCACACTTAAATATTCTCCTGC 60.261 45.833 0.00 0.00 0.00 4.85
416 417 4.640201 GCCACACTTAAATATTCTCCTGCA 59.360 41.667 0.00 0.00 0.00 4.41
417 418 5.449177 GCCACACTTAAATATTCTCCTGCAC 60.449 44.000 0.00 0.00 0.00 4.57
418 419 5.882557 CCACACTTAAATATTCTCCTGCACT 59.117 40.000 0.00 0.00 0.00 4.40
419 420 7.047891 CCACACTTAAATATTCTCCTGCACTA 58.952 38.462 0.00 0.00 0.00 2.74
420 421 7.716998 CCACACTTAAATATTCTCCTGCACTAT 59.283 37.037 0.00 0.00 0.00 2.12
421 422 9.113838 CACACTTAAATATTCTCCTGCACTATT 57.886 33.333 0.00 0.00 0.00 1.73
422 423 9.331282 ACACTTAAATATTCTCCTGCACTATTC 57.669 33.333 0.00 0.00 0.00 1.75
423 424 8.491152 CACTTAAATATTCTCCTGCACTATTCG 58.509 37.037 0.00 0.00 0.00 3.34
424 425 7.657761 ACTTAAATATTCTCCTGCACTATTCGG 59.342 37.037 0.00 0.00 0.00 4.30
425 426 5.552870 AATATTCTCCTGCACTATTCGGT 57.447 39.130 0.00 0.00 0.00 4.69
426 427 2.961526 TTCTCCTGCACTATTCGGTC 57.038 50.000 0.00 0.00 0.00 4.79
427 428 0.738975 TCTCCTGCACTATTCGGTCG 59.261 55.000 0.00 0.00 0.00 4.79
428 429 0.872021 CTCCTGCACTATTCGGTCGC 60.872 60.000 0.00 0.00 0.00 5.19
429 430 2.230940 CCTGCACTATTCGGTCGCG 61.231 63.158 0.00 0.00 0.00 5.87
430 431 2.860628 CTGCACTATTCGGTCGCGC 61.861 63.158 0.00 0.00 0.00 6.86
431 432 3.972803 GCACTATTCGGTCGCGCG 61.973 66.667 26.76 26.76 0.00 6.86
432 433 3.972803 CACTATTCGGTCGCGCGC 61.973 66.667 27.95 23.91 0.00 6.86
433 434 4.189188 ACTATTCGGTCGCGCGCT 62.189 61.111 30.48 11.09 0.00 5.92
434 435 3.682315 CTATTCGGTCGCGCGCTG 61.682 66.667 30.48 24.17 0.00 5.18
445 446 4.415501 CGCGCTGCTGTGTTCGTC 62.416 66.667 5.56 0.00 0.00 4.20
446 447 3.337889 GCGCTGCTGTGTTCGTCA 61.338 61.111 0.00 0.00 0.00 4.35
447 448 2.849007 CGCTGCTGTGTTCGTCAG 59.151 61.111 0.00 0.00 36.18 3.51
471 472 3.257561 CGAGGCGTCGCATCTTGG 61.258 66.667 26.94 10.24 39.88 3.61
472 473 3.567797 GAGGCGTCGCATCTTGGC 61.568 66.667 23.53 1.85 36.37 4.52
473 474 4.087892 AGGCGTCGCATCTTGGCT 62.088 61.111 20.50 1.47 0.00 4.75
474 475 2.202878 GGCGTCGCATCTTGGCTA 60.203 61.111 20.50 0.00 0.00 3.93
475 476 2.240500 GGCGTCGCATCTTGGCTAG 61.241 63.158 20.50 0.00 0.00 3.42
476 477 2.875786 GCGTCGCATCTTGGCTAGC 61.876 63.158 13.44 6.04 0.00 3.42
477 478 1.227089 CGTCGCATCTTGGCTAGCT 60.227 57.895 15.72 0.00 0.00 3.32
478 479 1.211818 CGTCGCATCTTGGCTAGCTC 61.212 60.000 15.72 5.44 0.00 4.09
479 480 0.878086 GTCGCATCTTGGCTAGCTCC 60.878 60.000 15.72 0.00 0.00 4.70
480 481 1.953138 CGCATCTTGGCTAGCTCCG 60.953 63.158 15.72 3.05 0.00 4.63
481 482 1.144936 GCATCTTGGCTAGCTCCGT 59.855 57.895 15.72 0.00 0.00 4.69
482 483 0.389391 GCATCTTGGCTAGCTCCGTA 59.611 55.000 15.72 0.00 0.00 4.02
483 484 1.870167 GCATCTTGGCTAGCTCCGTAC 60.870 57.143 15.72 0.00 0.00 3.67
484 485 0.669077 ATCTTGGCTAGCTCCGTACG 59.331 55.000 15.72 8.69 0.00 3.67
485 486 1.065928 CTTGGCTAGCTCCGTACGG 59.934 63.158 28.66 28.66 0.00 4.02
486 487 2.351336 CTTGGCTAGCTCCGTACGGG 62.351 65.000 32.80 23.55 35.59 5.28
487 488 4.281947 GGCTAGCTCCGTACGGGC 62.282 72.222 32.80 30.77 34.94 6.13
488 489 4.625781 GCTAGCTCCGTACGGGCG 62.626 72.222 32.80 23.97 36.84 6.13
535 536 2.927056 GGATGGCCGGAATCCCTT 59.073 61.111 20.76 4.85 38.13 3.95
536 537 1.228276 GGATGGCCGGAATCCCTTC 60.228 63.158 20.76 12.54 38.13 3.46
537 538 1.228276 GATGGCCGGAATCCCTTCC 60.228 63.158 5.05 0.00 46.48 3.46
543 544 3.920031 GGAATCCCTTCCGCCAAC 58.080 61.111 0.00 0.00 41.60 3.77
544 545 1.753078 GGAATCCCTTCCGCCAACC 60.753 63.158 0.00 0.00 41.60 3.77
545 546 2.045340 AATCCCTTCCGCCAACCG 60.045 61.111 0.00 0.00 0.00 4.44
546 547 2.814913 GAATCCCTTCCGCCAACCGT 62.815 60.000 0.00 0.00 34.38 4.83
547 548 2.420466 AATCCCTTCCGCCAACCGTT 62.420 55.000 0.00 0.00 34.38 4.44
548 549 2.420466 ATCCCTTCCGCCAACCGTTT 62.420 55.000 0.00 0.00 34.38 3.60
549 550 2.622962 CCCTTCCGCCAACCGTTTC 61.623 63.158 0.00 0.00 34.38 2.78
550 551 1.599797 CCTTCCGCCAACCGTTTCT 60.600 57.895 0.00 0.00 34.38 2.52
551 552 1.574702 CCTTCCGCCAACCGTTTCTC 61.575 60.000 0.00 0.00 34.38 2.87
552 553 1.897398 CTTCCGCCAACCGTTTCTCG 61.897 60.000 0.00 0.00 39.52 4.04
553 554 2.647680 TTCCGCCAACCGTTTCTCGT 62.648 55.000 0.00 0.00 37.94 4.18
554 555 2.248835 CCGCCAACCGTTTCTCGTT 61.249 57.895 0.00 0.00 37.94 3.85
555 556 1.644913 CGCCAACCGTTTCTCGTTT 59.355 52.632 0.00 0.00 37.94 3.60
556 557 0.028374 CGCCAACCGTTTCTCGTTTT 59.972 50.000 0.00 0.00 37.94 2.43
557 558 1.532298 CGCCAACCGTTTCTCGTTTTT 60.532 47.619 0.00 0.00 37.94 1.94
601 602 3.946606 GGAACCATTCTCGTTTTAGGGA 58.053 45.455 0.00 0.00 0.00 4.20
602 603 3.939592 GGAACCATTCTCGTTTTAGGGAG 59.060 47.826 0.00 0.00 0.00 4.30
603 604 4.323257 GGAACCATTCTCGTTTTAGGGAGA 60.323 45.833 0.00 0.00 37.52 3.71
604 605 4.473477 ACCATTCTCGTTTTAGGGAGAG 57.527 45.455 0.00 0.00 40.17 3.20
605 606 3.198872 CCATTCTCGTTTTAGGGAGAGC 58.801 50.000 0.00 0.00 40.17 4.09
606 607 3.118592 CCATTCTCGTTTTAGGGAGAGCT 60.119 47.826 0.00 0.00 40.17 4.09
607 608 3.870633 TTCTCGTTTTAGGGAGAGCTC 57.129 47.619 5.27 5.27 40.17 4.09
622 623 5.674933 GAGAGCTCCATAATTTTTACGGG 57.325 43.478 10.93 0.00 0.00 5.28
623 624 5.365619 GAGAGCTCCATAATTTTTACGGGA 58.634 41.667 10.93 0.00 0.00 5.14
624 625 5.123936 AGAGCTCCATAATTTTTACGGGAC 58.876 41.667 10.93 0.00 0.00 4.46
642 643 5.659048 GGGACGAGAACATTTCACATATC 57.341 43.478 0.00 0.00 0.00 1.63
643 644 5.360591 GGGACGAGAACATTTCACATATCT 58.639 41.667 0.00 0.00 0.00 1.98
644 645 5.235186 GGGACGAGAACATTTCACATATCTG 59.765 44.000 0.00 0.00 0.00 2.90
645 646 6.042777 GGACGAGAACATTTCACATATCTGA 58.957 40.000 0.00 0.00 0.00 3.27
646 647 6.535150 GGACGAGAACATTTCACATATCTGAA 59.465 38.462 0.00 0.00 0.00 3.02
647 648 7.064609 GGACGAGAACATTTCACATATCTGAAA 59.935 37.037 8.37 8.37 42.83 2.69
649 650 9.599866 ACGAGAACATTTCACATATCTGAAATA 57.400 29.630 15.84 0.00 45.22 1.40
661 662 8.965172 CACATATCTGAAATATGCTTCTTTTGC 58.035 33.333 5.22 0.00 35.88 3.68
662 663 8.139989 ACATATCTGAAATATGCTTCTTTTGCC 58.860 33.333 5.22 0.00 35.88 4.52
663 664 5.981088 TCTGAAATATGCTTCTTTTGCCA 57.019 34.783 0.00 0.00 0.00 4.92
664 665 6.343716 TCTGAAATATGCTTCTTTTGCCAA 57.656 33.333 0.00 0.00 0.00 4.52
665 666 6.757237 TCTGAAATATGCTTCTTTTGCCAAA 58.243 32.000 0.00 0.00 0.00 3.28
666 667 7.215789 TCTGAAATATGCTTCTTTTGCCAAAA 58.784 30.769 2.15 2.15 0.00 2.44
667 668 7.714377 TCTGAAATATGCTTCTTTTGCCAAAAA 59.286 29.630 3.91 0.00 34.17 1.94
668 669 7.638134 TGAAATATGCTTCTTTTGCCAAAAAC 58.362 30.769 3.91 0.00 31.94 2.43
669 670 7.498570 TGAAATATGCTTCTTTTGCCAAAAACT 59.501 29.630 3.91 0.00 31.94 2.66
670 671 8.900983 AAATATGCTTCTTTTGCCAAAAACTA 57.099 26.923 3.91 0.00 31.94 2.24
671 672 9.506018 AAATATGCTTCTTTTGCCAAAAACTAT 57.494 25.926 3.91 0.00 31.94 2.12
674 675 8.900983 ATGCTTCTTTTGCCAAAAACTATAAA 57.099 26.923 3.91 0.00 31.94 1.40
675 676 8.723942 TGCTTCTTTTGCCAAAAACTATAAAA 57.276 26.923 3.91 0.00 31.94 1.52
676 677 9.336171 TGCTTCTTTTGCCAAAAACTATAAAAT 57.664 25.926 3.91 0.00 31.94 1.82
699 700 5.761165 AACGATTATTTTACAATCCGGGG 57.239 39.130 0.00 0.00 0.00 5.73
700 701 3.566742 ACGATTATTTTACAATCCGGGGC 59.433 43.478 0.00 0.00 0.00 5.80
701 702 3.566322 CGATTATTTTACAATCCGGGGCA 59.434 43.478 0.00 0.00 0.00 5.36
702 703 4.217550 CGATTATTTTACAATCCGGGGCAT 59.782 41.667 0.00 0.00 0.00 4.40
703 704 5.278758 CGATTATTTTACAATCCGGGGCATT 60.279 40.000 0.00 0.00 0.00 3.56
704 705 6.072397 CGATTATTTTACAATCCGGGGCATTA 60.072 38.462 0.00 0.00 0.00 1.90
705 706 7.362574 CGATTATTTTACAATCCGGGGCATTAT 60.363 37.037 0.00 0.00 0.00 1.28
706 707 8.887264 ATTATTTTACAATCCGGGGCATTATA 57.113 30.769 0.00 0.00 0.00 0.98
707 708 6.584185 ATTTTACAATCCGGGGCATTATAC 57.416 37.500 0.00 0.00 0.00 1.47
708 709 4.708576 TTACAATCCGGGGCATTATACA 57.291 40.909 0.00 0.00 0.00 2.29
709 710 3.586470 ACAATCCGGGGCATTATACAA 57.414 42.857 0.00 0.00 0.00 2.41
710 711 3.219281 ACAATCCGGGGCATTATACAAC 58.781 45.455 0.00 0.00 0.00 3.32
711 712 3.218453 CAATCCGGGGCATTATACAACA 58.782 45.455 0.00 0.00 0.00 3.33
712 713 3.806949 ATCCGGGGCATTATACAACAT 57.193 42.857 0.00 0.00 0.00 2.71
713 714 3.134574 TCCGGGGCATTATACAACATC 57.865 47.619 0.00 0.00 0.00 3.06
714 715 2.708861 TCCGGGGCATTATACAACATCT 59.291 45.455 0.00 0.00 0.00 2.90
715 716 2.813754 CCGGGGCATTATACAACATCTG 59.186 50.000 0.00 0.00 0.00 2.90
716 717 2.226437 CGGGGCATTATACAACATCTGC 59.774 50.000 0.00 0.00 0.00 4.26
717 718 3.490348 GGGGCATTATACAACATCTGCT 58.510 45.455 0.00 0.00 0.00 4.24
718 719 4.651778 GGGGCATTATACAACATCTGCTA 58.348 43.478 0.00 0.00 0.00 3.49
719 720 4.697352 GGGGCATTATACAACATCTGCTAG 59.303 45.833 0.00 0.00 0.00 3.42
720 721 5.513094 GGGGCATTATACAACATCTGCTAGA 60.513 44.000 0.00 0.00 0.00 2.43
721 722 5.641209 GGGCATTATACAACATCTGCTAGAG 59.359 44.000 0.00 0.00 0.00 2.43
722 723 6.459066 GGCATTATACAACATCTGCTAGAGA 58.541 40.000 0.00 0.00 34.25 3.10
723 724 6.589523 GGCATTATACAACATCTGCTAGAGAG 59.410 42.308 0.00 0.00 32.80 3.20
724 725 7.151308 GCATTATACAACATCTGCTAGAGAGT 58.849 38.462 0.00 0.00 32.80 3.24
725 726 7.116090 GCATTATACAACATCTGCTAGAGAGTG 59.884 40.741 0.00 0.00 32.80 3.51
726 727 3.883830 ACAACATCTGCTAGAGAGTGG 57.116 47.619 0.00 0.00 32.80 4.00
727 728 3.435275 ACAACATCTGCTAGAGAGTGGA 58.565 45.455 0.00 0.00 32.80 4.02
728 729 3.446873 ACAACATCTGCTAGAGAGTGGAG 59.553 47.826 0.00 0.00 32.80 3.86
729 730 3.660970 ACATCTGCTAGAGAGTGGAGA 57.339 47.619 0.00 0.00 32.80 3.71
730 731 3.287222 ACATCTGCTAGAGAGTGGAGAC 58.713 50.000 0.00 0.00 33.70 3.36
731 732 3.053693 ACATCTGCTAGAGAGTGGAGACT 60.054 47.826 0.00 0.00 33.70 3.24
732 733 4.165180 ACATCTGCTAGAGAGTGGAGACTA 59.835 45.833 0.00 0.00 33.70 2.59
733 734 4.145365 TCTGCTAGAGAGTGGAGACTAC 57.855 50.000 0.00 0.00 30.16 2.73
734 735 3.118186 TCTGCTAGAGAGTGGAGACTACC 60.118 52.174 0.00 0.00 30.16 3.18
735 736 2.576648 TGCTAGAGAGTGGAGACTACCA 59.423 50.000 0.00 0.00 37.63 3.25
744 745 2.116238 TGGAGACTACCACCATAAGGC 58.884 52.381 0.00 0.00 39.06 4.35
745 746 2.116238 GGAGACTACCACCATAAGGCA 58.884 52.381 0.00 0.00 39.06 4.75
746 747 2.706190 GGAGACTACCACCATAAGGCAT 59.294 50.000 0.00 0.00 39.06 4.40
747 748 3.244249 GGAGACTACCACCATAAGGCATC 60.244 52.174 0.00 0.00 39.06 3.91
748 749 3.643792 GAGACTACCACCATAAGGCATCT 59.356 47.826 0.00 0.00 39.06 2.90
749 750 4.040755 AGACTACCACCATAAGGCATCTT 58.959 43.478 0.00 0.00 39.06 2.40
750 751 4.130118 GACTACCACCATAAGGCATCTTG 58.870 47.826 0.00 0.00 39.06 3.02
751 752 3.780294 ACTACCACCATAAGGCATCTTGA 59.220 43.478 0.00 0.00 39.06 3.02
752 753 3.287867 ACCACCATAAGGCATCTTGAG 57.712 47.619 0.00 0.00 39.06 3.02
753 754 2.578021 ACCACCATAAGGCATCTTGAGT 59.422 45.455 0.00 0.00 39.06 3.41
754 755 3.010584 ACCACCATAAGGCATCTTGAGTT 59.989 43.478 0.00 0.00 39.06 3.01
755 756 4.019174 CCACCATAAGGCATCTTGAGTTT 58.981 43.478 0.00 0.00 39.06 2.66
756 757 4.463891 CCACCATAAGGCATCTTGAGTTTT 59.536 41.667 0.00 0.00 39.06 2.43
757 758 5.393461 CCACCATAAGGCATCTTGAGTTTTC 60.393 44.000 0.00 0.00 39.06 2.29
758 759 4.396166 ACCATAAGGCATCTTGAGTTTTCG 59.604 41.667 0.00 0.00 39.06 3.46
759 760 4.635765 CCATAAGGCATCTTGAGTTTTCGA 59.364 41.667 0.00 0.00 34.59 3.71
760 761 5.123820 CCATAAGGCATCTTGAGTTTTCGAA 59.876 40.000 0.00 0.00 34.59 3.71
761 762 4.489679 AAGGCATCTTGAGTTTTCGAAC 57.510 40.909 0.00 0.00 0.00 3.95
762 763 2.480419 AGGCATCTTGAGTTTTCGAACG 59.520 45.455 0.00 0.00 0.00 3.95
763 764 2.223377 GGCATCTTGAGTTTTCGAACGT 59.777 45.455 0.00 0.00 0.00 3.99
764 765 3.303791 GGCATCTTGAGTTTTCGAACGTT 60.304 43.478 0.00 0.00 0.00 3.99
765 766 3.659444 GCATCTTGAGTTTTCGAACGTTG 59.341 43.478 5.00 0.00 0.00 4.10
766 767 4.551990 GCATCTTGAGTTTTCGAACGTTGA 60.552 41.667 5.00 0.29 0.00 3.18
767 768 4.509915 TCTTGAGTTTTCGAACGTTGAC 57.490 40.909 5.00 0.00 0.00 3.18
768 769 2.982919 TGAGTTTTCGAACGTTGACG 57.017 45.000 5.00 3.90 46.33 4.35
769 770 1.005766 TGAGTTTTCGAACGTTGACGC 60.006 47.619 5.00 0.00 44.43 5.19
770 771 0.043652 AGTTTTCGAACGTTGACGCG 60.044 50.000 5.00 3.53 44.43 6.01
772 773 0.314418 TTTTCGAACGTTGACGCGTG 60.314 50.000 20.70 4.12 45.00 5.34
773 774 2.668332 TTTCGAACGTTGACGCGTGC 62.668 55.000 20.70 9.34 45.00 5.34
774 775 3.978764 CGAACGTTGACGCGTGCA 61.979 61.111 20.70 12.29 45.00 4.57
775 776 2.549282 GAACGTTGACGCGTGCAT 59.451 55.556 20.70 0.00 45.00 3.96
776 777 1.083015 GAACGTTGACGCGTGCATT 60.083 52.632 20.70 6.11 45.00 3.56
777 778 1.320382 GAACGTTGACGCGTGCATTG 61.320 55.000 20.70 12.01 45.00 2.82
778 779 3.158813 CGTTGACGCGTGCATTGC 61.159 61.111 20.70 0.06 0.00 3.56
779 780 2.051435 GTTGACGCGTGCATTGCA 60.051 55.556 20.70 7.38 35.60 4.08
788 789 2.869646 TGCATTGCACGTGCTAGC 59.130 55.556 37.59 33.82 42.92 3.42
789 790 1.965411 TGCATTGCACGTGCTAGCA 60.965 52.632 34.19 34.19 42.92 3.49
790 791 1.307355 TGCATTGCACGTGCTAGCAT 61.307 50.000 34.19 22.71 42.92 3.79
791 792 0.657312 GCATTGCACGTGCTAGCATA 59.343 50.000 37.59 16.84 40.94 3.14
792 793 1.063912 GCATTGCACGTGCTAGCATAA 59.936 47.619 37.59 24.11 40.94 1.90
793 794 2.477694 GCATTGCACGTGCTAGCATAAA 60.478 45.455 37.59 23.41 40.94 1.40
794 795 3.757184 CATTGCACGTGCTAGCATAAAA 58.243 40.909 37.59 22.70 40.94 1.52
814 815 2.851263 AAAACCGAGCAGTACCATCA 57.149 45.000 0.00 0.00 0.00 3.07
815 816 2.851263 AAACCGAGCAGTACCATCAA 57.149 45.000 0.00 0.00 0.00 2.57
817 818 4.481368 AAACCGAGCAGTACCATCAATA 57.519 40.909 0.00 0.00 0.00 1.90
818 819 4.689612 AACCGAGCAGTACCATCAATAT 57.310 40.909 0.00 0.00 0.00 1.28
819 820 4.689612 ACCGAGCAGTACCATCAATATT 57.310 40.909 0.00 0.00 0.00 1.28
820 821 4.632153 ACCGAGCAGTACCATCAATATTC 58.368 43.478 0.00 0.00 0.00 1.75
821 822 3.675225 CCGAGCAGTACCATCAATATTCG 59.325 47.826 0.00 0.00 0.00 3.34
822 823 3.121944 CGAGCAGTACCATCAATATTCGC 59.878 47.826 0.00 0.00 0.00 4.70
859 864 0.033920 GGCTTTGACTGGCCCAAAAG 59.966 55.000 0.00 6.24 42.30 2.27
894 899 2.167693 CACGAGACAGGCCCATTAACTA 59.832 50.000 0.00 0.00 0.00 2.24
895 900 2.431057 ACGAGACAGGCCCATTAACTAG 59.569 50.000 0.00 0.00 0.00 2.57
907 912 4.508124 CCCATTAACTAGCACGATCTGAAC 59.492 45.833 0.00 0.00 0.00 3.18
981 986 1.048160 CAAACCCCCAAAGCCACAGT 61.048 55.000 0.00 0.00 0.00 3.55
984 989 1.604593 CCCCCAAAGCCACAGTGAG 60.605 63.158 0.62 0.00 0.00 3.51
1008 1013 2.761213 CTTCCCCCAATGGCAGCC 60.761 66.667 3.66 3.66 0.00 4.85
1148 1153 2.969238 CATCATCCTCACCGCCGC 60.969 66.667 0.00 0.00 0.00 6.53
1149 1154 4.241555 ATCATCCTCACCGCCGCC 62.242 66.667 0.00 0.00 0.00 6.13
1628 2011 4.452733 CCCTTCTCCGCCGTGTCC 62.453 72.222 0.00 0.00 0.00 4.02
1629 2012 4.796231 CCTTCTCCGCCGTGTCCG 62.796 72.222 0.00 0.00 0.00 4.79
1820 2203 2.214216 CGTCTTCCCCACCCTCACA 61.214 63.158 0.00 0.00 0.00 3.58
1899 2282 2.590114 AACTTCTTCCCCGACCCCG 61.590 63.158 0.00 0.00 0.00 5.73
2131 2514 1.065709 TGGTTACTTTGATCTCCCGGC 60.066 52.381 0.00 0.00 0.00 6.13
2186 2569 1.059006 AGGATCCAGATCACCAGGGC 61.059 60.000 15.82 0.00 39.54 5.19
2219 2602 0.545171 CTGATGACCCAGCCATCACT 59.455 55.000 0.00 0.00 43.67 3.41
2513 2896 1.467920 GGAAGGTGAAGAATGGGCAG 58.532 55.000 0.00 0.00 0.00 4.85
2625 3008 5.615289 CTGAAGGTTATAAGGTGGAGATGG 58.385 45.833 0.00 0.00 0.00 3.51
2660 3043 4.101448 GAGTGTGGAGGGGCGCAT 62.101 66.667 10.83 0.00 0.00 4.73
2748 3131 3.056107 GGGTAAAATTGTGCCCTCCTTTC 60.056 47.826 14.36 0.00 38.12 2.62
3129 3515 8.515695 TTTCTGCTTGAGTTGATAATGATGAT 57.484 30.769 0.00 0.00 0.00 2.45
3171 3558 2.102252 TGCAAGTGAAACATTTGGGGTC 59.898 45.455 8.54 0.00 41.43 4.46
3386 3773 8.703604 TTGTACTGCAGTAGTCTCATTTATTC 57.296 34.615 26.70 10.60 40.89 1.75
3466 3855 5.220340 GCATGCACTGAACTATTGAATTTGC 60.220 40.000 14.21 0.00 0.00 3.68
3520 3909 8.060931 TGATTTGGCAGCAAATTGTATAGTTA 57.939 30.769 0.00 0.00 35.18 2.24
3621 4010 9.683069 CTTTTACCCTTCATATCACAAATATGC 57.317 33.333 1.06 0.00 33.29 3.14
3627 4016 6.963242 CCTTCATATCACAAATATGCGTATGC 59.037 38.462 0.00 0.00 43.20 3.14
3769 4158 2.228582 TGCATTGTAACACCATGACTGC 59.771 45.455 0.00 0.00 0.00 4.40
3782 4171 0.101040 TGACTGCTTTGTGTGCTTGC 59.899 50.000 0.00 0.00 0.00 4.01
3783 4172 0.383231 GACTGCTTTGTGTGCTTGCT 59.617 50.000 0.00 0.00 0.00 3.91
3791 4180 3.516981 TTGTGTGCTTGCTGCTTTTTA 57.483 38.095 0.00 0.00 43.37 1.52
3796 4185 6.918626 TGTGTGCTTGCTGCTTTTTATATAA 58.081 32.000 0.00 0.00 43.37 0.98
3838 4227 7.775120 AACAACAGTGTCAGAAATTCATTTCT 58.225 30.769 8.71 8.71 46.13 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.489127 TCGTGATTTTAATGGTACTGGTTG 57.511 37.500 0.00 0.00 0.00 3.77
4 5 7.780008 TGTATCGTGATTTTAATGGTACTGG 57.220 36.000 0.00 0.00 0.00 4.00
5 6 8.335356 CCTTGTATCGTGATTTTAATGGTACTG 58.665 37.037 0.00 0.00 0.00 2.74
8 9 9.316730 GTACCTTGTATCGTGATTTTAATGGTA 57.683 33.333 0.00 0.00 0.00 3.25
9 10 8.044908 AGTACCTTGTATCGTGATTTTAATGGT 58.955 33.333 0.00 0.00 0.00 3.55
10 11 8.433421 AGTACCTTGTATCGTGATTTTAATGG 57.567 34.615 0.00 0.00 0.00 3.16
11 12 8.548721 GGAGTACCTTGTATCGTGATTTTAATG 58.451 37.037 0.00 0.00 0.00 1.90
12 13 7.713942 GGGAGTACCTTGTATCGTGATTTTAAT 59.286 37.037 0.00 0.00 35.85 1.40
13 14 7.043565 GGGAGTACCTTGTATCGTGATTTTAA 58.956 38.462 0.00 0.00 35.85 1.52
14 15 6.576185 GGGAGTACCTTGTATCGTGATTTTA 58.424 40.000 0.00 0.00 35.85 1.52
15 16 5.425630 GGGAGTACCTTGTATCGTGATTTT 58.574 41.667 0.00 0.00 35.85 1.82
16 17 5.019785 GGGAGTACCTTGTATCGTGATTT 57.980 43.478 0.00 0.00 35.85 2.17
17 18 4.667519 GGGAGTACCTTGTATCGTGATT 57.332 45.455 0.00 0.00 35.85 2.57
30 31 0.890683 TTCGAAACGGAGGGAGTACC 59.109 55.000 0.00 0.00 40.67 3.34
31 32 2.730550 TTTCGAAACGGAGGGAGTAC 57.269 50.000 6.47 0.00 0.00 2.73
32 33 4.272489 TCTATTTCGAAACGGAGGGAGTA 58.728 43.478 13.81 0.00 0.00 2.59
33 34 3.094572 TCTATTTCGAAACGGAGGGAGT 58.905 45.455 13.81 0.00 0.00 3.85
34 35 3.795623 TCTATTTCGAAACGGAGGGAG 57.204 47.619 13.81 2.68 0.00 4.30
35 36 3.702548 TCATCTATTTCGAAACGGAGGGA 59.297 43.478 13.81 12.23 0.00 4.20
36 37 3.802685 GTCATCTATTTCGAAACGGAGGG 59.197 47.826 13.81 10.38 0.00 4.30
37 38 4.683832 AGTCATCTATTTCGAAACGGAGG 58.316 43.478 13.81 15.02 0.00 4.30
38 39 5.340803 TGAGTCATCTATTTCGAAACGGAG 58.659 41.667 13.81 10.92 0.00 4.63
39 40 5.319140 TGAGTCATCTATTTCGAAACGGA 57.681 39.130 13.81 14.09 0.00 4.69
40 41 5.577164 AGTTGAGTCATCTATTTCGAAACGG 59.423 40.000 13.81 9.03 0.00 4.44
41 42 6.633668 AGTTGAGTCATCTATTTCGAAACG 57.366 37.500 13.81 7.69 0.00 3.60
42 43 8.283291 ACAAAGTTGAGTCATCTATTTCGAAAC 58.717 33.333 13.81 0.00 0.00 2.78
43 44 8.378172 ACAAAGTTGAGTCATCTATTTCGAAA 57.622 30.769 13.91 13.91 0.00 3.46
44 45 7.962964 ACAAAGTTGAGTCATCTATTTCGAA 57.037 32.000 4.14 0.00 0.00 3.71
45 46 8.304596 AGTACAAAGTTGAGTCATCTATTTCGA 58.695 33.333 4.14 0.00 0.00 3.71
46 47 8.467402 AGTACAAAGTTGAGTCATCTATTTCG 57.533 34.615 4.14 0.00 0.00 3.46
78 79 9.623000 AATCCAACTTTGTAGTAACTTTGTACT 57.377 29.630 0.00 0.00 37.98 2.73
96 97 9.765795 CTCCGTTCTAAAATAGATAATCCAACT 57.234 33.333 0.00 0.00 34.22 3.16
97 98 8.989980 CCTCCGTTCTAAAATAGATAATCCAAC 58.010 37.037 0.00 0.00 34.22 3.77
98 99 8.154856 CCCTCCGTTCTAAAATAGATAATCCAA 58.845 37.037 0.00 0.00 34.22 3.53
99 100 7.511371 TCCCTCCGTTCTAAAATAGATAATCCA 59.489 37.037 0.00 0.00 34.22 3.41
100 101 7.904205 TCCCTCCGTTCTAAAATAGATAATCC 58.096 38.462 0.00 0.00 34.22 3.01
101 102 8.586744 ACTCCCTCCGTTCTAAAATAGATAATC 58.413 37.037 0.00 0.00 34.22 1.75
102 103 8.493787 ACTCCCTCCGTTCTAAAATAGATAAT 57.506 34.615 0.00 0.00 34.22 1.28
103 104 7.909485 ACTCCCTCCGTTCTAAAATAGATAA 57.091 36.000 0.00 0.00 34.22 1.75
104 105 9.597681 ATTACTCCCTCCGTTCTAAAATAGATA 57.402 33.333 0.00 0.00 34.22 1.98
105 106 7.909485 TTACTCCCTCCGTTCTAAAATAGAT 57.091 36.000 0.00 0.00 34.22 1.98
106 107 7.909485 ATTACTCCCTCCGTTCTAAAATAGA 57.091 36.000 0.00 0.00 0.00 1.98
107 108 8.202137 TCAATTACTCCCTCCGTTCTAAAATAG 58.798 37.037 0.00 0.00 0.00 1.73
108 109 8.081517 TCAATTACTCCCTCCGTTCTAAAATA 57.918 34.615 0.00 0.00 0.00 1.40
109 110 6.954232 TCAATTACTCCCTCCGTTCTAAAAT 58.046 36.000 0.00 0.00 0.00 1.82
110 111 6.363167 TCAATTACTCCCTCCGTTCTAAAA 57.637 37.500 0.00 0.00 0.00 1.52
111 112 6.555463 ATCAATTACTCCCTCCGTTCTAAA 57.445 37.500 0.00 0.00 0.00 1.85
112 113 7.850935 ATATCAATTACTCCCTCCGTTCTAA 57.149 36.000 0.00 0.00 0.00 2.10
113 114 7.850935 AATATCAATTACTCCCTCCGTTCTA 57.149 36.000 0.00 0.00 0.00 2.10
114 115 6.749036 AATATCAATTACTCCCTCCGTTCT 57.251 37.500 0.00 0.00 0.00 3.01
115 116 8.311836 TGATAATATCAATTACTCCCTCCGTTC 58.688 37.037 0.00 0.00 36.11 3.95
116 117 8.202461 TGATAATATCAATTACTCCCTCCGTT 57.798 34.615 0.00 0.00 36.11 4.44
117 118 7.792364 TGATAATATCAATTACTCCCTCCGT 57.208 36.000 0.00 0.00 36.11 4.69
118 119 7.649705 CGATGATAATATCAATTACTCCCTCCG 59.350 40.741 7.07 0.00 43.50 4.63
119 120 7.439655 GCGATGATAATATCAATTACTCCCTCC 59.560 40.741 7.07 0.00 43.50 4.30
120 121 7.981789 TGCGATGATAATATCAATTACTCCCTC 59.018 37.037 7.07 0.00 43.50 4.30
121 122 7.766278 GTGCGATGATAATATCAATTACTCCCT 59.234 37.037 7.07 0.00 43.50 4.20
122 123 7.766278 AGTGCGATGATAATATCAATTACTCCC 59.234 37.037 7.07 0.00 43.50 4.30
123 124 8.598924 CAGTGCGATGATAATATCAATTACTCC 58.401 37.037 7.07 0.00 43.50 3.85
124 125 8.598924 CCAGTGCGATGATAATATCAATTACTC 58.401 37.037 7.07 0.00 43.50 2.59
125 126 7.065085 GCCAGTGCGATGATAATATCAATTACT 59.935 37.037 7.07 6.94 43.50 2.24
126 127 7.148423 TGCCAGTGCGATGATAATATCAATTAC 60.148 37.037 7.07 4.97 41.09 1.89
127 128 6.878389 TGCCAGTGCGATGATAATATCAATTA 59.122 34.615 7.07 0.00 41.09 1.40
128 129 5.706833 TGCCAGTGCGATGATAATATCAATT 59.293 36.000 7.07 0.00 41.09 2.32
129 130 5.122869 GTGCCAGTGCGATGATAATATCAAT 59.877 40.000 7.07 0.00 41.09 2.57
130 131 4.452114 GTGCCAGTGCGATGATAATATCAA 59.548 41.667 7.07 0.00 41.09 2.57
131 132 3.996363 GTGCCAGTGCGATGATAATATCA 59.004 43.478 5.32 5.32 41.67 2.15
132 133 3.996363 TGTGCCAGTGCGATGATAATATC 59.004 43.478 0.00 0.00 41.78 1.63
133 134 3.748048 GTGTGCCAGTGCGATGATAATAT 59.252 43.478 0.00 0.00 41.78 1.28
134 135 3.130633 GTGTGCCAGTGCGATGATAATA 58.869 45.455 0.00 0.00 41.78 0.98
135 136 1.942657 GTGTGCCAGTGCGATGATAAT 59.057 47.619 0.00 0.00 41.78 1.28
136 137 1.066215 AGTGTGCCAGTGCGATGATAA 60.066 47.619 0.00 0.00 41.78 1.75
137 138 0.536724 AGTGTGCCAGTGCGATGATA 59.463 50.000 0.00 0.00 41.78 2.15
138 139 0.321919 AAGTGTGCCAGTGCGATGAT 60.322 50.000 0.00 0.00 41.78 2.45
139 140 1.071299 AAGTGTGCCAGTGCGATGA 59.929 52.632 0.00 0.00 41.78 2.92
140 141 1.208358 CAAGTGTGCCAGTGCGATG 59.792 57.895 0.00 0.00 41.78 3.84
141 142 0.321919 ATCAAGTGTGCCAGTGCGAT 60.322 50.000 0.00 0.00 41.78 4.58
142 143 1.071299 ATCAAGTGTGCCAGTGCGA 59.929 52.632 0.00 0.00 41.78 5.10
143 144 1.208358 CATCAAGTGTGCCAGTGCG 59.792 57.895 0.00 0.00 41.78 5.34
144 145 1.197721 GTACATCAAGTGTGCCAGTGC 59.802 52.381 0.00 0.00 42.24 4.40
145 146 2.224079 GTGTACATCAAGTGTGCCAGTG 59.776 50.000 0.00 0.00 42.10 3.66
146 147 2.494059 GTGTACATCAAGTGTGCCAGT 58.506 47.619 0.00 0.00 42.10 4.00
147 148 1.806542 GGTGTACATCAAGTGTGCCAG 59.193 52.381 0.00 0.00 42.10 4.85
148 149 1.141858 TGGTGTACATCAAGTGTGCCA 59.858 47.619 6.28 0.00 42.10 4.92
149 150 1.890876 TGGTGTACATCAAGTGTGCC 58.109 50.000 6.28 0.00 42.10 5.01
150 151 3.073678 TCATGGTGTACATCAAGTGTGC 58.926 45.455 13.89 0.00 42.24 4.57
151 152 5.064325 CAGATCATGGTGTACATCAAGTGTG 59.936 44.000 13.89 7.01 42.24 3.82
152 153 5.181009 CAGATCATGGTGTACATCAAGTGT 58.819 41.667 13.89 2.43 44.95 3.55
153 154 4.573607 CCAGATCATGGTGTACATCAAGTG 59.426 45.833 13.89 8.17 44.91 3.16
154 155 4.774124 CCAGATCATGGTGTACATCAAGT 58.226 43.478 13.89 1.79 44.91 3.16
167 168 6.045318 AGACACGAGTAAATTCCAGATCATG 58.955 40.000 0.00 0.00 0.00 3.07
168 169 6.227298 AGACACGAGTAAATTCCAGATCAT 57.773 37.500 0.00 0.00 0.00 2.45
169 170 5.661056 AGACACGAGTAAATTCCAGATCA 57.339 39.130 0.00 0.00 0.00 2.92
170 171 8.138712 AGATTAGACACGAGTAAATTCCAGATC 58.861 37.037 0.00 0.00 0.00 2.75
171 172 8.012957 AGATTAGACACGAGTAAATTCCAGAT 57.987 34.615 0.00 0.00 0.00 2.90
172 173 7.339721 AGAGATTAGACACGAGTAAATTCCAGA 59.660 37.037 0.00 0.00 0.00 3.86
173 174 7.484975 AGAGATTAGACACGAGTAAATTCCAG 58.515 38.462 0.00 0.00 0.00 3.86
174 175 7.339721 AGAGAGATTAGACACGAGTAAATTCCA 59.660 37.037 0.00 0.00 0.00 3.53
175 176 7.708998 AGAGAGATTAGACACGAGTAAATTCC 58.291 38.462 0.00 0.00 0.00 3.01
176 177 9.654417 GTAGAGAGATTAGACACGAGTAAATTC 57.346 37.037 0.00 0.00 0.00 2.17
177 178 9.398538 AGTAGAGAGATTAGACACGAGTAAATT 57.601 33.333 0.00 0.00 0.00 1.82
178 179 8.832521 CAGTAGAGAGATTAGACACGAGTAAAT 58.167 37.037 0.00 0.00 0.00 1.40
179 180 7.823310 ACAGTAGAGAGATTAGACACGAGTAAA 59.177 37.037 0.00 0.00 0.00 2.01
180 181 7.329499 ACAGTAGAGAGATTAGACACGAGTAA 58.671 38.462 0.00 0.00 0.00 2.24
181 182 6.876155 ACAGTAGAGAGATTAGACACGAGTA 58.124 40.000 0.00 0.00 0.00 2.59
182 183 5.736813 ACAGTAGAGAGATTAGACACGAGT 58.263 41.667 0.00 0.00 0.00 4.18
183 184 6.422701 CCTACAGTAGAGAGATTAGACACGAG 59.577 46.154 9.38 0.00 0.00 4.18
184 185 6.097981 TCCTACAGTAGAGAGATTAGACACGA 59.902 42.308 9.38 0.00 0.00 4.35
185 186 6.282167 TCCTACAGTAGAGAGATTAGACACG 58.718 44.000 9.38 0.00 0.00 4.49
186 187 8.508883 TTTCCTACAGTAGAGAGATTAGACAC 57.491 38.462 9.38 0.00 0.00 3.67
187 188 9.344772 GATTTCCTACAGTAGAGAGATTAGACA 57.655 37.037 9.38 0.00 0.00 3.41
188 189 9.344772 TGATTTCCTACAGTAGAGAGATTAGAC 57.655 37.037 9.38 0.00 0.00 2.59
189 190 9.344772 GTGATTTCCTACAGTAGAGAGATTAGA 57.655 37.037 9.38 0.00 0.00 2.10
190 191 9.349713 AGTGATTTCCTACAGTAGAGAGATTAG 57.650 37.037 9.38 0.00 0.00 1.73
191 192 9.702253 AAGTGATTTCCTACAGTAGAGAGATTA 57.298 33.333 9.38 0.76 0.00 1.75
192 193 8.602472 AAGTGATTTCCTACAGTAGAGAGATT 57.398 34.615 9.38 0.00 0.00 2.40
193 194 8.602472 AAAGTGATTTCCTACAGTAGAGAGAT 57.398 34.615 9.38 5.65 0.00 2.75
194 195 8.423906 AAAAGTGATTTCCTACAGTAGAGAGA 57.576 34.615 9.38 1.09 0.00 3.10
195 196 9.575783 GTAAAAGTGATTTCCTACAGTAGAGAG 57.424 37.037 9.38 0.00 32.27 3.20
196 197 9.310449 AGTAAAAGTGATTTCCTACAGTAGAGA 57.690 33.333 9.38 2.18 32.27 3.10
197 198 9.930693 AAGTAAAAGTGATTTCCTACAGTAGAG 57.069 33.333 9.38 0.00 32.27 2.43
198 199 9.924650 GAAGTAAAAGTGATTTCCTACAGTAGA 57.075 33.333 9.38 0.00 32.27 2.59
199 200 9.152595 GGAAGTAAAAGTGATTTCCTACAGTAG 57.847 37.037 0.00 0.00 35.53 2.57
200 201 8.653191 TGGAAGTAAAAGTGATTTCCTACAGTA 58.347 33.333 3.55 0.00 38.46 2.74
201 202 7.514721 TGGAAGTAAAAGTGATTTCCTACAGT 58.485 34.615 3.55 0.00 38.46 3.55
202 203 7.979444 TGGAAGTAAAAGTGATTTCCTACAG 57.021 36.000 3.55 0.00 38.46 2.74
203 204 7.979444 CTGGAAGTAAAAGTGATTTCCTACA 57.021 36.000 3.55 0.00 38.46 2.74
246 247 8.400186 GCAGGAGTAACAACAACTTTAAAGTAA 58.600 33.333 20.83 0.00 38.57 2.24
247 248 7.771826 AGCAGGAGTAACAACAACTTTAAAGTA 59.228 33.333 20.83 0.96 38.57 2.24
248 249 6.602009 AGCAGGAGTAACAACAACTTTAAAGT 59.398 34.615 15.22 15.22 42.04 2.66
249 250 7.027778 AGCAGGAGTAACAACAACTTTAAAG 57.972 36.000 13.76 13.76 0.00 1.85
250 251 7.338449 AGAAGCAGGAGTAACAACAACTTTAAA 59.662 33.333 0.00 0.00 0.00 1.52
251 252 6.826741 AGAAGCAGGAGTAACAACAACTTTAA 59.173 34.615 0.00 0.00 0.00 1.52
252 253 6.354130 AGAAGCAGGAGTAACAACAACTTTA 58.646 36.000 0.00 0.00 0.00 1.85
253 254 5.193679 AGAAGCAGGAGTAACAACAACTTT 58.806 37.500 0.00 0.00 0.00 2.66
254 255 4.781934 AGAAGCAGGAGTAACAACAACTT 58.218 39.130 0.00 0.00 0.00 2.66
255 256 4.423625 AGAAGCAGGAGTAACAACAACT 57.576 40.909 0.00 0.00 0.00 3.16
256 257 5.054477 TGTAGAAGCAGGAGTAACAACAAC 58.946 41.667 0.00 0.00 0.00 3.32
257 258 5.284861 TGTAGAAGCAGGAGTAACAACAA 57.715 39.130 0.00 0.00 0.00 2.83
258 259 4.948341 TGTAGAAGCAGGAGTAACAACA 57.052 40.909 0.00 0.00 0.00 3.33
259 260 5.932303 TGATTGTAGAAGCAGGAGTAACAAC 59.068 40.000 0.00 0.00 0.00 3.32
260 261 6.109156 TGATTGTAGAAGCAGGAGTAACAA 57.891 37.500 0.00 0.00 0.00 2.83
261 262 5.738619 TGATTGTAGAAGCAGGAGTAACA 57.261 39.130 0.00 0.00 0.00 2.41
262 263 6.818644 TGATTGATTGTAGAAGCAGGAGTAAC 59.181 38.462 0.00 0.00 0.00 2.50
263 264 6.946340 TGATTGATTGTAGAAGCAGGAGTAA 58.054 36.000 0.00 0.00 0.00 2.24
264 265 6.544928 TGATTGATTGTAGAAGCAGGAGTA 57.455 37.500 0.00 0.00 0.00 2.59
265 266 5.426689 TGATTGATTGTAGAAGCAGGAGT 57.573 39.130 0.00 0.00 0.00 3.85
266 267 6.939132 AATGATTGATTGTAGAAGCAGGAG 57.061 37.500 0.00 0.00 0.00 3.69
267 268 7.707624 AAAATGATTGATTGTAGAAGCAGGA 57.292 32.000 0.00 0.00 0.00 3.86
268 269 9.294030 GTAAAAATGATTGATTGTAGAAGCAGG 57.706 33.333 0.00 0.00 0.00 4.85
269 270 9.294030 GGTAAAAATGATTGATTGTAGAAGCAG 57.706 33.333 0.00 0.00 0.00 4.24
270 271 8.801299 TGGTAAAAATGATTGATTGTAGAAGCA 58.199 29.630 0.00 0.00 0.00 3.91
271 272 9.807649 ATGGTAAAAATGATTGATTGTAGAAGC 57.192 29.630 0.00 0.00 0.00 3.86
289 290 9.619316 CGAAACAAATGTATCAGAATGGTAAAA 57.381 29.630 0.00 0.00 30.50 1.52
290 291 7.753132 GCGAAACAAATGTATCAGAATGGTAAA 59.247 33.333 0.00 0.00 30.50 2.01
291 292 7.247728 GCGAAACAAATGTATCAGAATGGTAA 58.752 34.615 0.00 0.00 30.50 2.85
292 293 6.456315 CGCGAAACAAATGTATCAGAATGGTA 60.456 38.462 0.00 0.00 36.16 3.25
293 294 5.640732 GCGAAACAAATGTATCAGAATGGT 58.359 37.500 0.00 0.00 36.16 3.55
294 295 4.730042 CGCGAAACAAATGTATCAGAATGG 59.270 41.667 0.00 0.00 36.16 3.16
295 296 4.730042 CCGCGAAACAAATGTATCAGAATG 59.270 41.667 8.23 0.00 37.54 2.67
296 297 4.634004 TCCGCGAAACAAATGTATCAGAAT 59.366 37.500 8.23 0.00 0.00 2.40
297 298 3.997681 TCCGCGAAACAAATGTATCAGAA 59.002 39.130 8.23 0.00 0.00 3.02
298 299 3.369756 GTCCGCGAAACAAATGTATCAGA 59.630 43.478 8.23 0.00 0.00 3.27
299 300 3.124466 TGTCCGCGAAACAAATGTATCAG 59.876 43.478 8.23 0.00 0.00 2.90
300 301 3.067833 TGTCCGCGAAACAAATGTATCA 58.932 40.909 8.23 0.00 0.00 2.15
301 302 3.733024 TGTCCGCGAAACAAATGTATC 57.267 42.857 8.23 0.00 0.00 2.24
302 303 4.695217 ATTGTCCGCGAAACAAATGTAT 57.305 36.364 24.12 10.11 39.84 2.29
303 304 5.608676 TTATTGTCCGCGAAACAAATGTA 57.391 34.783 24.12 13.52 39.84 2.29
304 305 4.491234 TTATTGTCCGCGAAACAAATGT 57.509 36.364 24.12 14.30 39.84 2.71
305 306 6.194508 CAGTATTATTGTCCGCGAAACAAATG 59.805 38.462 24.12 11.65 39.84 2.32
306 307 6.128117 ACAGTATTATTGTCCGCGAAACAAAT 60.128 34.615 24.12 18.00 39.84 2.32
307 308 5.179742 ACAGTATTATTGTCCGCGAAACAAA 59.820 36.000 24.12 13.53 39.84 2.83
308 309 4.691685 ACAGTATTATTGTCCGCGAAACAA 59.308 37.500 23.07 23.07 40.63 2.83
309 310 4.247258 ACAGTATTATTGTCCGCGAAACA 58.753 39.130 8.23 9.21 0.00 2.83
310 311 4.565564 AGACAGTATTATTGTCCGCGAAAC 59.434 41.667 8.23 6.11 44.68 2.78
311 312 4.565166 CAGACAGTATTATTGTCCGCGAAA 59.435 41.667 8.23 0.00 44.68 3.46
312 313 4.109766 CAGACAGTATTATTGTCCGCGAA 58.890 43.478 8.23 0.00 44.68 4.70
313 314 3.702330 CAGACAGTATTATTGTCCGCGA 58.298 45.455 8.23 0.00 44.68 5.87
314 315 2.218759 GCAGACAGTATTATTGTCCGCG 59.781 50.000 13.83 0.00 44.68 6.46
315 316 3.194861 TGCAGACAGTATTATTGTCCGC 58.805 45.455 16.44 16.44 44.99 5.54
316 317 4.682787 TCTGCAGACAGTATTATTGTCCG 58.317 43.478 13.74 6.88 44.68 4.79
317 318 6.989169 AGAATCTGCAGACAGTATTATTGTCC 59.011 38.462 20.97 0.00 44.68 4.02
318 319 7.708322 TGAGAATCTGCAGACAGTATTATTGTC 59.292 37.037 20.97 14.61 44.77 3.18
319 320 7.559486 TGAGAATCTGCAGACAGTATTATTGT 58.441 34.615 20.97 5.09 44.77 2.71
320 321 8.429493 TTGAGAATCTGCAGACAGTATTATTG 57.571 34.615 20.97 0.00 44.77 1.90
321 322 8.887717 GTTTGAGAATCTGCAGACAGTATTATT 58.112 33.333 20.97 6.60 44.77 1.40
322 323 8.043113 TGTTTGAGAATCTGCAGACAGTATTAT 58.957 33.333 20.97 6.17 44.77 1.28
323 324 7.386059 TGTTTGAGAATCTGCAGACAGTATTA 58.614 34.615 20.97 0.00 44.77 0.98
324 325 6.233434 TGTTTGAGAATCTGCAGACAGTATT 58.767 36.000 20.97 9.11 44.77 1.89
325 326 5.798132 TGTTTGAGAATCTGCAGACAGTAT 58.202 37.500 20.97 4.49 44.77 2.12
326 327 5.213891 TGTTTGAGAATCTGCAGACAGTA 57.786 39.130 20.97 1.75 44.77 2.74
327 328 4.077300 TGTTTGAGAATCTGCAGACAGT 57.923 40.909 20.97 7.39 44.77 3.55
328 329 5.624344 ATTGTTTGAGAATCTGCAGACAG 57.376 39.130 20.97 0.00 45.95 3.51
329 330 6.712095 AGTAATTGTTTGAGAATCTGCAGACA 59.288 34.615 20.97 9.82 34.92 3.41
330 331 7.138692 AGTAATTGTTTGAGAATCTGCAGAC 57.861 36.000 20.97 7.48 34.92 3.51
331 332 7.445096 TGAAGTAATTGTTTGAGAATCTGCAGA 59.555 33.333 20.79 20.79 34.92 4.26
332 333 7.536622 GTGAAGTAATTGTTTGAGAATCTGCAG 59.463 37.037 7.63 7.63 34.92 4.41
333 334 7.013178 TGTGAAGTAATTGTTTGAGAATCTGCA 59.987 33.333 0.00 0.00 34.92 4.41
334 335 7.324616 GTGTGAAGTAATTGTTTGAGAATCTGC 59.675 37.037 0.00 0.00 34.92 4.26
335 336 8.344831 TGTGTGAAGTAATTGTTTGAGAATCTG 58.655 33.333 0.00 0.00 34.92 2.90
336 337 8.450578 TGTGTGAAGTAATTGTTTGAGAATCT 57.549 30.769 0.00 0.00 34.92 2.40
337 338 9.173939 CTTGTGTGAAGTAATTGTTTGAGAATC 57.826 33.333 0.00 0.00 0.00 2.52
338 339 8.902806 TCTTGTGTGAAGTAATTGTTTGAGAAT 58.097 29.630 0.00 0.00 0.00 2.40
339 340 8.275015 TCTTGTGTGAAGTAATTGTTTGAGAA 57.725 30.769 0.00 0.00 0.00 2.87
340 341 7.467267 GCTCTTGTGTGAAGTAATTGTTTGAGA 60.467 37.037 0.00 0.00 0.00 3.27
341 342 6.634436 GCTCTTGTGTGAAGTAATTGTTTGAG 59.366 38.462 0.00 0.00 0.00 3.02
342 343 6.318648 AGCTCTTGTGTGAAGTAATTGTTTGA 59.681 34.615 0.00 0.00 0.00 2.69
343 344 6.498304 AGCTCTTGTGTGAAGTAATTGTTTG 58.502 36.000 0.00 0.00 0.00 2.93
344 345 6.543831 AGAGCTCTTGTGTGAAGTAATTGTTT 59.456 34.615 11.45 0.00 0.00 2.83
345 346 6.058183 AGAGCTCTTGTGTGAAGTAATTGTT 58.942 36.000 11.45 0.00 0.00 2.83
346 347 5.615289 AGAGCTCTTGTGTGAAGTAATTGT 58.385 37.500 11.45 0.00 0.00 2.71
347 348 6.369005 CAAGAGCTCTTGTGTGAAGTAATTG 58.631 40.000 37.56 16.16 46.11 2.32
348 349 6.551385 CAAGAGCTCTTGTGTGAAGTAATT 57.449 37.500 37.56 8.50 46.11 1.40
361 362 2.357009 CACACAAGTTGCAAGAGCTCTT 59.643 45.455 23.49 23.49 42.74 2.85
362 363 1.945394 CACACAAGTTGCAAGAGCTCT 59.055 47.619 11.45 11.45 42.74 4.09
363 364 1.672881 ACACACAAGTTGCAAGAGCTC 59.327 47.619 5.27 5.27 42.74 4.09
364 365 1.402968 CACACACAAGTTGCAAGAGCT 59.597 47.619 0.00 0.00 42.74 4.09
365 366 1.401552 TCACACACAAGTTGCAAGAGC 59.598 47.619 0.00 0.00 42.57 4.09
366 367 2.223340 GGTCACACACAAGTTGCAAGAG 60.223 50.000 0.00 0.00 0.00 2.85
367 368 1.742831 GGTCACACACAAGTTGCAAGA 59.257 47.619 0.00 0.00 0.00 3.02
368 369 1.531677 CGGTCACACACAAGTTGCAAG 60.532 52.381 0.00 0.00 0.00 4.01
369 370 0.449786 CGGTCACACACAAGTTGCAA 59.550 50.000 1.81 0.00 0.00 4.08
370 371 1.372838 CCGGTCACACACAAGTTGCA 61.373 55.000 1.81 0.00 0.00 4.08
371 372 1.092921 TCCGGTCACACACAAGTTGC 61.093 55.000 0.00 0.00 0.00 4.17
372 373 1.063469 GTTCCGGTCACACACAAGTTG 59.937 52.381 0.00 0.00 0.00 3.16
373 374 1.375551 GTTCCGGTCACACACAAGTT 58.624 50.000 0.00 0.00 0.00 2.66
374 375 0.808453 CGTTCCGGTCACACACAAGT 60.808 55.000 0.00 0.00 0.00 3.16
375 376 1.931551 CGTTCCGGTCACACACAAG 59.068 57.895 0.00 0.00 0.00 3.16
376 377 2.174969 GCGTTCCGGTCACACACAA 61.175 57.895 0.00 0.00 0.00 3.33
377 378 2.586635 GCGTTCCGGTCACACACA 60.587 61.111 0.00 0.00 0.00 3.72
378 379 3.343421 GGCGTTCCGGTCACACAC 61.343 66.667 0.00 0.00 0.00 3.82
379 380 3.851128 TGGCGTTCCGGTCACACA 61.851 61.111 0.00 0.00 34.14 3.72
380 381 3.343421 GTGGCGTTCCGGTCACAC 61.343 66.667 0.00 1.47 42.03 3.82
382 383 3.343421 GTGTGGCGTTCCGGTCAC 61.343 66.667 0.00 4.64 42.75 3.67
383 384 1.746322 TAAGTGTGGCGTTCCGGTCA 61.746 55.000 0.00 0.00 34.14 4.02
384 385 0.600782 TTAAGTGTGGCGTTCCGGTC 60.601 55.000 0.00 0.00 34.14 4.79
385 386 0.179051 TTTAAGTGTGGCGTTCCGGT 60.179 50.000 0.00 0.00 34.14 5.28
386 387 1.161843 ATTTAAGTGTGGCGTTCCGG 58.838 50.000 0.00 0.00 34.14 5.14
387 388 4.331717 AGAATATTTAAGTGTGGCGTTCCG 59.668 41.667 0.00 0.00 34.14 4.30
388 389 5.220796 GGAGAATATTTAAGTGTGGCGTTCC 60.221 44.000 0.00 0.00 0.00 3.62
389 390 5.585047 AGGAGAATATTTAAGTGTGGCGTTC 59.415 40.000 0.00 0.00 0.00 3.95
390 391 5.354234 CAGGAGAATATTTAAGTGTGGCGTT 59.646 40.000 0.00 0.00 0.00 4.84
391 392 4.876107 CAGGAGAATATTTAAGTGTGGCGT 59.124 41.667 0.00 0.00 0.00 5.68
392 393 4.260784 GCAGGAGAATATTTAAGTGTGGCG 60.261 45.833 0.00 0.00 0.00 5.69
393 394 4.640201 TGCAGGAGAATATTTAAGTGTGGC 59.360 41.667 0.00 0.00 0.00 5.01
394 395 5.882557 AGTGCAGGAGAATATTTAAGTGTGG 59.117 40.000 0.00 0.00 0.00 4.17
395 396 6.992063 AGTGCAGGAGAATATTTAAGTGTG 57.008 37.500 0.00 0.00 0.00 3.82
396 397 9.331282 GAATAGTGCAGGAGAATATTTAAGTGT 57.669 33.333 0.00 0.00 0.00 3.55
397 398 8.491152 CGAATAGTGCAGGAGAATATTTAAGTG 58.509 37.037 0.00 0.00 0.00 3.16
398 399 7.657761 CCGAATAGTGCAGGAGAATATTTAAGT 59.342 37.037 0.00 0.00 0.00 2.24
399 400 7.657761 ACCGAATAGTGCAGGAGAATATTTAAG 59.342 37.037 0.00 0.00 0.00 1.85
400 401 7.506114 ACCGAATAGTGCAGGAGAATATTTAA 58.494 34.615 0.00 0.00 0.00 1.52
401 402 7.062749 ACCGAATAGTGCAGGAGAATATTTA 57.937 36.000 0.00 0.00 0.00 1.40
402 403 5.930135 ACCGAATAGTGCAGGAGAATATTT 58.070 37.500 0.00 0.00 0.00 1.40
403 404 5.542779 GACCGAATAGTGCAGGAGAATATT 58.457 41.667 0.00 0.00 0.00 1.28
404 405 4.321304 CGACCGAATAGTGCAGGAGAATAT 60.321 45.833 0.00 0.00 0.00 1.28
405 406 3.004419 CGACCGAATAGTGCAGGAGAATA 59.996 47.826 0.00 0.00 0.00 1.75
406 407 2.223829 CGACCGAATAGTGCAGGAGAAT 60.224 50.000 0.00 0.00 0.00 2.40
407 408 1.134367 CGACCGAATAGTGCAGGAGAA 59.866 52.381 0.00 0.00 0.00 2.87
408 409 0.738975 CGACCGAATAGTGCAGGAGA 59.261 55.000 0.00 0.00 0.00 3.71
409 410 0.872021 GCGACCGAATAGTGCAGGAG 60.872 60.000 0.00 0.00 0.00 3.69
410 411 1.141019 GCGACCGAATAGTGCAGGA 59.859 57.895 0.00 0.00 0.00 3.86
411 412 2.230940 CGCGACCGAATAGTGCAGG 61.231 63.158 0.00 0.00 36.29 4.85
412 413 2.860628 GCGCGACCGAATAGTGCAG 61.861 63.158 12.10 0.00 39.09 4.41
413 414 2.883730 GCGCGACCGAATAGTGCA 60.884 61.111 12.10 0.00 39.09 4.57
414 415 3.972803 CGCGCGACCGAATAGTGC 61.973 66.667 28.94 0.00 36.21 4.40
415 416 3.972803 GCGCGCGACCGAATAGTG 61.973 66.667 37.18 0.00 36.29 2.74
416 417 4.189188 AGCGCGCGACCGAATAGT 62.189 61.111 37.18 0.00 36.29 2.12
417 418 3.682315 CAGCGCGCGACCGAATAG 61.682 66.667 37.18 8.90 36.29 1.73
428 429 4.415501 GACGAACACAGCAGCGCG 62.416 66.667 0.00 0.00 0.00 6.86
429 430 3.287121 CTGACGAACACAGCAGCGC 62.287 63.158 0.00 0.00 0.00 5.92
430 431 2.849007 CTGACGAACACAGCAGCG 59.151 61.111 0.00 0.00 0.00 5.18
454 455 3.257561 CCAAGATGCGACGCCTCG 61.258 66.667 18.69 5.26 43.28 4.63
455 456 2.629050 TAGCCAAGATGCGACGCCTC 62.629 60.000 18.69 17.31 36.02 4.70
456 457 2.635229 CTAGCCAAGATGCGACGCCT 62.635 60.000 18.69 7.51 36.02 5.52
457 458 2.202878 TAGCCAAGATGCGACGCC 60.203 61.111 18.69 2.18 36.02 5.68
458 459 2.875786 GCTAGCCAAGATGCGACGC 61.876 63.158 14.19 14.19 36.02 5.19
459 460 1.211818 GAGCTAGCCAAGATGCGACG 61.212 60.000 12.13 0.00 36.02 5.12
460 461 0.878086 GGAGCTAGCCAAGATGCGAC 60.878 60.000 12.13 0.00 36.02 5.19
461 462 1.443407 GGAGCTAGCCAAGATGCGA 59.557 57.895 12.13 0.00 36.02 5.10
462 463 4.040068 GGAGCTAGCCAAGATGCG 57.960 61.111 12.13 0.00 36.02 4.73
463 464 0.389391 TACGGAGCTAGCCAAGATGC 59.611 55.000 12.13 0.00 0.00 3.91
464 465 1.600663 CGTACGGAGCTAGCCAAGATG 60.601 57.143 12.13 0.00 0.00 2.90
465 466 0.669077 CGTACGGAGCTAGCCAAGAT 59.331 55.000 12.13 0.00 0.00 2.40
466 467 1.381928 CCGTACGGAGCTAGCCAAGA 61.382 60.000 30.64 0.00 37.50 3.02
467 468 1.065928 CCGTACGGAGCTAGCCAAG 59.934 63.158 30.64 5.19 37.50 3.61
468 469 2.420568 CCCGTACGGAGCTAGCCAA 61.421 63.158 35.41 0.00 37.50 4.52
469 470 2.831742 CCCGTACGGAGCTAGCCA 60.832 66.667 35.41 0.00 37.50 4.75
470 471 4.281947 GCCCGTACGGAGCTAGCC 62.282 72.222 35.41 10.43 37.50 3.93
471 472 4.625781 CGCCCGTACGGAGCTAGC 62.626 72.222 35.41 26.19 37.50 3.42
518 519 1.228276 GAAGGGATTCCGGCCATCC 60.228 63.158 19.61 19.61 39.80 3.51
519 520 1.228276 GGAAGGGATTCCGGCCATC 60.228 63.158 2.24 0.00 38.33 3.51
520 521 2.927056 GGAAGGGATTCCGGCCAT 59.073 61.111 2.24 0.00 38.33 4.40
526 527 1.753078 GGTTGGCGGAAGGGATTCC 60.753 63.158 0.00 0.00 37.75 3.01
527 528 2.112815 CGGTTGGCGGAAGGGATTC 61.113 63.158 0.00 0.00 0.00 2.52
528 529 2.045340 CGGTTGGCGGAAGGGATT 60.045 61.111 0.00 0.00 0.00 3.01
529 530 2.420466 AAACGGTTGGCGGAAGGGAT 62.420 55.000 0.00 0.00 0.00 3.85
530 531 3.122727 AAACGGTTGGCGGAAGGGA 62.123 57.895 0.00 0.00 0.00 4.20
531 532 2.596338 AAACGGTTGGCGGAAGGG 60.596 61.111 0.00 0.00 0.00 3.95
532 533 1.574702 GAGAAACGGTTGGCGGAAGG 61.575 60.000 0.00 0.00 0.00 3.46
533 534 1.866925 GAGAAACGGTTGGCGGAAG 59.133 57.895 0.00 0.00 0.00 3.46
534 535 1.957186 CGAGAAACGGTTGGCGGAA 60.957 57.895 0.00 0.00 38.46 4.30
535 536 2.356553 CGAGAAACGGTTGGCGGA 60.357 61.111 0.00 0.00 38.46 5.54
569 570 0.764752 AATGGTTCCCCCGCCAAAAA 60.765 50.000 0.00 0.00 38.38 1.94
570 571 1.152226 AATGGTTCCCCCGCCAAAA 60.152 52.632 0.00 0.00 38.38 2.44
571 572 1.608046 GAATGGTTCCCCCGCCAAA 60.608 57.895 0.00 0.00 38.38 3.28
572 573 2.036572 GAATGGTTCCCCCGCCAA 59.963 61.111 0.00 0.00 38.38 4.52
573 574 2.938798 AGAATGGTTCCCCCGCCA 60.939 61.111 0.00 0.00 39.33 5.69
574 575 2.124278 GAGAATGGTTCCCCCGCC 60.124 66.667 0.00 0.00 35.15 6.13
575 576 2.513897 CGAGAATGGTTCCCCCGC 60.514 66.667 0.00 0.00 35.15 6.13
576 577 0.322187 AAACGAGAATGGTTCCCCCG 60.322 55.000 0.00 0.00 35.39 5.73
577 578 1.919240 AAAACGAGAATGGTTCCCCC 58.081 50.000 0.00 0.00 35.39 5.40
578 579 3.014623 CCTAAAACGAGAATGGTTCCCC 58.985 50.000 0.00 0.00 35.39 4.81
579 580 3.014623 CCCTAAAACGAGAATGGTTCCC 58.985 50.000 0.00 0.00 35.39 3.97
580 581 3.939592 CTCCCTAAAACGAGAATGGTTCC 59.060 47.826 0.00 0.00 35.39 3.62
581 582 4.828829 TCTCCCTAAAACGAGAATGGTTC 58.171 43.478 0.00 0.00 35.39 3.62
582 583 4.833390 CTCTCCCTAAAACGAGAATGGTT 58.167 43.478 0.00 0.00 39.28 3.67
583 584 3.369576 GCTCTCCCTAAAACGAGAATGGT 60.370 47.826 0.00 0.00 34.79 3.55
584 585 3.118592 AGCTCTCCCTAAAACGAGAATGG 60.119 47.826 0.00 0.00 34.79 3.16
585 586 4.116238 GAGCTCTCCCTAAAACGAGAATG 58.884 47.826 6.43 0.00 34.79 2.67
586 587 3.133183 GGAGCTCTCCCTAAAACGAGAAT 59.867 47.826 14.64 0.00 43.94 2.40
587 588 2.496470 GGAGCTCTCCCTAAAACGAGAA 59.504 50.000 14.64 0.00 43.94 2.87
588 589 2.100989 GGAGCTCTCCCTAAAACGAGA 58.899 52.381 14.64 0.00 43.94 4.04
589 590 2.588027 GGAGCTCTCCCTAAAACGAG 57.412 55.000 14.64 0.00 43.94 4.18
600 601 5.236695 GTCCCGTAAAAATTATGGAGCTCTC 59.763 44.000 14.64 4.40 0.00 3.20
601 602 5.123936 GTCCCGTAAAAATTATGGAGCTCT 58.876 41.667 14.64 0.00 0.00 4.09
602 603 4.025145 CGTCCCGTAAAAATTATGGAGCTC 60.025 45.833 4.71 4.71 0.00 4.09
603 604 3.875134 CGTCCCGTAAAAATTATGGAGCT 59.125 43.478 9.44 0.00 0.00 4.09
604 605 3.872771 TCGTCCCGTAAAAATTATGGAGC 59.127 43.478 9.44 2.41 0.00 4.70
605 606 5.353938 TCTCGTCCCGTAAAAATTATGGAG 58.646 41.667 9.44 0.73 0.00 3.86
606 607 5.341872 TCTCGTCCCGTAAAAATTATGGA 57.658 39.130 9.44 0.00 0.00 3.41
607 608 5.352016 TGTTCTCGTCCCGTAAAAATTATGG 59.648 40.000 2.04 2.04 0.00 2.74
608 609 6.411630 TGTTCTCGTCCCGTAAAAATTATG 57.588 37.500 0.00 0.00 0.00 1.90
609 610 7.619964 AATGTTCTCGTCCCGTAAAAATTAT 57.380 32.000 0.00 0.00 0.00 1.28
610 611 7.172875 TGAAATGTTCTCGTCCCGTAAAAATTA 59.827 33.333 0.00 0.00 0.00 1.40
611 612 5.952526 AATGTTCTCGTCCCGTAAAAATT 57.047 34.783 0.00 0.00 0.00 1.82
612 613 5.470777 TGAAATGTTCTCGTCCCGTAAAAAT 59.529 36.000 0.00 0.00 0.00 1.82
613 614 4.815308 TGAAATGTTCTCGTCCCGTAAAAA 59.185 37.500 0.00 0.00 0.00 1.94
614 615 4.211794 GTGAAATGTTCTCGTCCCGTAAAA 59.788 41.667 0.00 0.00 0.00 1.52
615 616 3.742369 GTGAAATGTTCTCGTCCCGTAAA 59.258 43.478 0.00 0.00 0.00 2.01
616 617 3.243805 TGTGAAATGTTCTCGTCCCGTAA 60.244 43.478 0.00 0.00 0.00 3.18
617 618 2.296752 TGTGAAATGTTCTCGTCCCGTA 59.703 45.455 0.00 0.00 0.00 4.02
618 619 1.069513 TGTGAAATGTTCTCGTCCCGT 59.930 47.619 0.00 0.00 0.00 5.28
619 620 1.790755 TGTGAAATGTTCTCGTCCCG 58.209 50.000 0.00 0.00 0.00 5.14
620 621 5.235186 CAGATATGTGAAATGTTCTCGTCCC 59.765 44.000 0.00 0.00 0.00 4.46
621 622 6.042777 TCAGATATGTGAAATGTTCTCGTCC 58.957 40.000 0.00 0.00 0.00 4.79
622 623 7.525688 TTCAGATATGTGAAATGTTCTCGTC 57.474 36.000 12.58 0.00 33.41 4.20
623 624 7.905604 TTTCAGATATGTGAAATGTTCTCGT 57.094 32.000 20.75 0.00 40.68 4.18
635 636 8.965172 GCAAAAGAAGCATATTTCAGATATGTG 58.035 33.333 7.59 0.00 35.14 3.21
636 637 8.139989 GGCAAAAGAAGCATATTTCAGATATGT 58.860 33.333 7.59 0.00 35.14 2.29
637 638 8.139350 TGGCAAAAGAAGCATATTTCAGATATG 58.861 33.333 2.45 2.45 35.63 1.78
638 639 8.241497 TGGCAAAAGAAGCATATTTCAGATAT 57.759 30.769 0.00 0.00 0.00 1.63
639 640 7.643569 TGGCAAAAGAAGCATATTTCAGATA 57.356 32.000 0.00 0.00 0.00 1.98
640 641 6.534475 TGGCAAAAGAAGCATATTTCAGAT 57.466 33.333 0.00 0.00 0.00 2.90
641 642 5.981088 TGGCAAAAGAAGCATATTTCAGA 57.019 34.783 0.00 0.00 0.00 3.27
642 643 7.424227 TTTTGGCAAAAGAAGCATATTTCAG 57.576 32.000 20.81 0.00 0.00 3.02
643 644 7.498570 AGTTTTTGGCAAAAGAAGCATATTTCA 59.501 29.630 23.03 3.45 32.32 2.69
644 645 7.864686 AGTTTTTGGCAAAAGAAGCATATTTC 58.135 30.769 23.03 0.00 32.32 2.17
645 646 7.806409 AGTTTTTGGCAAAAGAAGCATATTT 57.194 28.000 23.03 0.32 32.32 1.40
648 649 9.988815 TTTATAGTTTTTGGCAAAAGAAGCATA 57.011 25.926 23.03 14.66 32.32 3.14
649 650 8.900983 TTTATAGTTTTTGGCAAAAGAAGCAT 57.099 26.923 23.03 15.46 32.32 3.79
650 651 8.723942 TTTTATAGTTTTTGGCAAAAGAAGCA 57.276 26.923 23.03 7.63 32.32 3.91
673 674 8.354426 CCCCGGATTGTAAAATAATCGTTATTT 58.646 33.333 0.73 8.82 45.18 1.40
674 675 7.522562 GCCCCGGATTGTAAAATAATCGTTATT 60.523 37.037 0.73 0.00 37.43 1.40
675 676 6.072342 GCCCCGGATTGTAAAATAATCGTTAT 60.072 38.462 0.73 0.00 35.81 1.89
676 677 5.239087 GCCCCGGATTGTAAAATAATCGTTA 59.761 40.000 0.73 0.00 35.81 3.18
677 678 4.037089 GCCCCGGATTGTAAAATAATCGTT 59.963 41.667 0.73 0.00 35.81 3.85
678 679 3.566742 GCCCCGGATTGTAAAATAATCGT 59.433 43.478 0.73 0.00 35.81 3.73
679 680 3.566322 TGCCCCGGATTGTAAAATAATCG 59.434 43.478 0.73 0.00 35.81 3.34
680 681 5.722021 ATGCCCCGGATTGTAAAATAATC 57.278 39.130 0.73 0.00 34.55 1.75
681 682 7.790782 ATAATGCCCCGGATTGTAAAATAAT 57.209 32.000 0.73 0.00 0.00 1.28
682 683 7.724506 TGTATAATGCCCCGGATTGTAAAATAA 59.275 33.333 0.73 0.00 0.00 1.40
683 684 7.232188 TGTATAATGCCCCGGATTGTAAAATA 58.768 34.615 0.73 0.00 0.00 1.40
684 685 6.071984 TGTATAATGCCCCGGATTGTAAAAT 58.928 36.000 0.73 0.00 0.00 1.82
685 686 5.446860 TGTATAATGCCCCGGATTGTAAAA 58.553 37.500 0.73 0.00 0.00 1.52
686 687 5.050126 TGTATAATGCCCCGGATTGTAAA 57.950 39.130 0.73 0.00 0.00 2.01
687 688 4.708576 TGTATAATGCCCCGGATTGTAA 57.291 40.909 0.73 0.00 0.00 2.41
688 689 4.141459 TGTTGTATAATGCCCCGGATTGTA 60.141 41.667 0.73 0.00 0.00 2.41
689 690 3.219281 GTTGTATAATGCCCCGGATTGT 58.781 45.455 0.73 0.00 0.00 2.71
690 691 3.218453 TGTTGTATAATGCCCCGGATTG 58.782 45.455 0.73 0.00 0.00 2.67
691 692 3.586470 TGTTGTATAATGCCCCGGATT 57.414 42.857 0.73 0.00 0.00 3.01
692 693 3.330701 AGATGTTGTATAATGCCCCGGAT 59.669 43.478 0.73 0.00 0.00 4.18
693 694 2.708861 AGATGTTGTATAATGCCCCGGA 59.291 45.455 0.73 0.00 0.00 5.14
694 695 2.813754 CAGATGTTGTATAATGCCCCGG 59.186 50.000 0.00 0.00 0.00 5.73
695 696 2.226437 GCAGATGTTGTATAATGCCCCG 59.774 50.000 0.00 0.00 0.00 5.73
696 697 3.490348 AGCAGATGTTGTATAATGCCCC 58.510 45.455 0.00 0.00 34.24 5.80
697 698 5.551233 TCTAGCAGATGTTGTATAATGCCC 58.449 41.667 0.00 0.00 34.24 5.36
698 699 6.459066 TCTCTAGCAGATGTTGTATAATGCC 58.541 40.000 0.00 0.00 34.24 4.40
699 700 7.116090 CACTCTCTAGCAGATGTTGTATAATGC 59.884 40.741 0.00 0.00 0.00 3.56
700 701 7.598118 CCACTCTCTAGCAGATGTTGTATAATG 59.402 40.741 0.00 0.00 0.00 1.90
701 702 7.507277 TCCACTCTCTAGCAGATGTTGTATAAT 59.493 37.037 0.00 0.00 0.00 1.28
702 703 6.833933 TCCACTCTCTAGCAGATGTTGTATAA 59.166 38.462 0.00 0.00 0.00 0.98
703 704 6.365520 TCCACTCTCTAGCAGATGTTGTATA 58.634 40.000 0.00 0.00 0.00 1.47
704 705 5.204292 TCCACTCTCTAGCAGATGTTGTAT 58.796 41.667 0.00 0.00 0.00 2.29
705 706 4.600062 TCCACTCTCTAGCAGATGTTGTA 58.400 43.478 0.00 0.00 0.00 2.41
706 707 3.435275 TCCACTCTCTAGCAGATGTTGT 58.565 45.455 0.00 0.00 0.00 3.32
707 708 3.698539 TCTCCACTCTCTAGCAGATGTTG 59.301 47.826 0.00 0.00 0.00 3.33
708 709 3.699038 GTCTCCACTCTCTAGCAGATGTT 59.301 47.826 0.00 0.00 0.00 2.71
709 710 3.053693 AGTCTCCACTCTCTAGCAGATGT 60.054 47.826 0.00 0.00 0.00 3.06
710 711 3.554934 AGTCTCCACTCTCTAGCAGATG 58.445 50.000 0.00 0.00 0.00 2.90
711 712 3.951563 AGTCTCCACTCTCTAGCAGAT 57.048 47.619 0.00 0.00 0.00 2.90
712 713 3.118186 GGTAGTCTCCACTCTCTAGCAGA 60.118 52.174 0.00 0.00 33.62 4.26
713 714 3.211045 GGTAGTCTCCACTCTCTAGCAG 58.789 54.545 0.00 0.00 33.62 4.24
714 715 2.576648 TGGTAGTCTCCACTCTCTAGCA 59.423 50.000 0.00 0.00 38.15 3.49
715 716 3.284793 TGGTAGTCTCCACTCTCTAGC 57.715 52.381 0.00 0.00 33.62 3.42
724 725 2.116238 GCCTTATGGTGGTAGTCTCCA 58.884 52.381 0.00 0.00 35.27 3.86
725 726 2.116238 TGCCTTATGGTGGTAGTCTCC 58.884 52.381 0.00 0.00 35.27 3.71
726 727 3.643792 AGATGCCTTATGGTGGTAGTCTC 59.356 47.826 0.00 0.00 35.27 3.36
727 728 3.658725 AGATGCCTTATGGTGGTAGTCT 58.341 45.455 0.00 0.00 35.27 3.24
728 729 4.130118 CAAGATGCCTTATGGTGGTAGTC 58.870 47.826 0.00 0.00 35.27 2.59
729 730 3.780294 TCAAGATGCCTTATGGTGGTAGT 59.220 43.478 0.00 0.00 35.27 2.73
730 731 4.141620 ACTCAAGATGCCTTATGGTGGTAG 60.142 45.833 0.00 0.00 35.27 3.18
731 732 3.780294 ACTCAAGATGCCTTATGGTGGTA 59.220 43.478 0.00 0.00 35.27 3.25
732 733 2.578021 ACTCAAGATGCCTTATGGTGGT 59.422 45.455 0.00 0.00 35.27 4.16
733 734 3.287867 ACTCAAGATGCCTTATGGTGG 57.712 47.619 0.00 0.00 35.27 4.61
734 735 5.644644 GAAAACTCAAGATGCCTTATGGTG 58.355 41.667 0.00 0.00 35.27 4.17
735 736 4.396166 CGAAAACTCAAGATGCCTTATGGT 59.604 41.667 0.00 0.00 35.27 3.55
736 737 4.635765 TCGAAAACTCAAGATGCCTTATGG 59.364 41.667 0.00 0.00 0.00 2.74
737 738 5.801350 TCGAAAACTCAAGATGCCTTATG 57.199 39.130 0.00 0.00 0.00 1.90
738 739 5.163854 CGTTCGAAAACTCAAGATGCCTTAT 60.164 40.000 0.00 0.00 32.95 1.73
739 740 4.151689 CGTTCGAAAACTCAAGATGCCTTA 59.848 41.667 0.00 0.00 32.95 2.69
740 741 3.058914 CGTTCGAAAACTCAAGATGCCTT 60.059 43.478 0.00 0.00 32.95 4.35
741 742 2.480419 CGTTCGAAAACTCAAGATGCCT 59.520 45.455 0.00 0.00 32.95 4.75
742 743 2.223377 ACGTTCGAAAACTCAAGATGCC 59.777 45.455 0.00 0.00 32.95 4.40
743 744 3.521524 ACGTTCGAAAACTCAAGATGC 57.478 42.857 0.00 0.00 32.95 3.91
744 745 4.898488 GTCAACGTTCGAAAACTCAAGATG 59.102 41.667 0.00 0.00 32.95 2.90
745 746 4.317839 CGTCAACGTTCGAAAACTCAAGAT 60.318 41.667 0.00 0.00 32.95 2.40
746 747 3.000476 CGTCAACGTTCGAAAACTCAAGA 60.000 43.478 0.00 0.00 32.95 3.02
747 748 3.269310 CGTCAACGTTCGAAAACTCAAG 58.731 45.455 0.00 0.00 32.95 3.02
748 749 2.535335 GCGTCAACGTTCGAAAACTCAA 60.535 45.455 12.95 0.00 42.22 3.02
749 750 1.005766 GCGTCAACGTTCGAAAACTCA 60.006 47.619 12.95 0.00 42.22 3.41
750 751 1.644409 GCGTCAACGTTCGAAAACTC 58.356 50.000 12.95 0.00 42.22 3.01
751 752 0.043652 CGCGTCAACGTTCGAAAACT 60.044 50.000 12.95 0.00 42.22 2.66
752 753 0.314498 ACGCGTCAACGTTCGAAAAC 60.314 50.000 5.58 0.00 45.75 2.43
753 754 0.314418 CACGCGTCAACGTTCGAAAA 60.314 50.000 9.86 0.00 45.75 2.29
754 755 1.270388 CACGCGTCAACGTTCGAAA 59.730 52.632 9.86 0.00 45.75 3.46
755 756 2.914948 CACGCGTCAACGTTCGAA 59.085 55.556 9.86 0.00 45.75 3.71
756 757 3.684315 GCACGCGTCAACGTTCGA 61.684 61.111 9.86 5.12 45.75 3.71
757 758 2.742317 AATGCACGCGTCAACGTTCG 62.742 55.000 9.86 0.52 45.75 3.95
758 759 1.083015 AATGCACGCGTCAACGTTC 60.083 52.632 9.86 0.00 45.75 3.95
759 760 1.368731 CAATGCACGCGTCAACGTT 60.369 52.632 9.86 6.95 45.75 3.99
761 762 3.158813 GCAATGCACGCGTCAACG 61.159 61.111 9.86 0.00 43.27 4.10
762 763 2.051435 TGCAATGCACGCGTCAAC 60.051 55.556 9.86 1.91 31.71 3.18
771 772 1.307355 ATGCTAGCACGTGCAATGCA 61.307 50.000 37.05 37.05 45.92 3.96
772 773 0.657312 TATGCTAGCACGTGCAATGC 59.343 50.000 39.21 34.46 45.16 3.56
773 774 3.403613 TTTATGCTAGCACGTGCAATG 57.596 42.857 39.21 27.85 45.16 2.82
774 775 4.433186 TTTTTATGCTAGCACGTGCAAT 57.567 36.364 39.21 27.17 45.16 3.56
775 776 3.906014 TTTTTATGCTAGCACGTGCAA 57.094 38.095 39.21 22.35 45.16 4.08
794 795 3.134574 TGATGGTACTGCTCGGTTTTT 57.865 42.857 0.00 0.00 0.00 1.94
799 800 3.675225 CGAATATTGATGGTACTGCTCGG 59.325 47.826 0.00 0.00 0.00 4.63
811 812 7.905604 TTTAATCAGATCGGCGAATATTGAT 57.094 32.000 15.93 16.81 0.00 2.57
812 813 7.722795 TTTTAATCAGATCGGCGAATATTGA 57.277 32.000 15.93 15.28 0.00 2.57
813 814 7.058354 CGTTTTTAATCAGATCGGCGAATATTG 59.942 37.037 15.93 10.19 0.00 1.90
814 815 7.069569 CGTTTTTAATCAGATCGGCGAATATT 58.930 34.615 15.93 13.32 0.00 1.28
815 816 6.347402 CCGTTTTTAATCAGATCGGCGAATAT 60.347 38.462 15.93 0.00 0.00 1.28
817 818 4.260620 CCGTTTTTAATCAGATCGGCGAAT 60.261 41.667 15.93 2.17 0.00 3.34
818 819 3.062909 CCGTTTTTAATCAGATCGGCGAA 59.937 43.478 15.93 0.00 0.00 4.70
819 820 2.605818 CCGTTTTTAATCAGATCGGCGA 59.394 45.455 13.87 13.87 0.00 5.54
820 821 2.286184 CCCGTTTTTAATCAGATCGGCG 60.286 50.000 0.00 0.00 35.95 6.46
821 822 2.540973 GCCCGTTTTTAATCAGATCGGC 60.541 50.000 1.24 0.00 35.95 5.54
822 823 2.943033 AGCCCGTTTTTAATCAGATCGG 59.057 45.455 0.00 0.00 36.85 4.18
859 864 1.000607 TCTCGTGTATATTGGCTCGGC 60.001 52.381 0.00 0.00 0.00 5.54
894 899 0.392706 TGTGTGGTTCAGATCGTGCT 59.607 50.000 0.00 0.00 0.00 4.40
895 900 0.512952 GTGTGTGGTTCAGATCGTGC 59.487 55.000 0.00 0.00 0.00 5.34
907 912 1.019278 GTAGTCGCCATGGTGTGTGG 61.019 60.000 24.28 2.32 39.80 4.17
984 989 1.821332 CATTGGGGGAAGCTCGAGC 60.821 63.158 30.01 30.01 42.49 5.03
1580 1963 0.105913 GGAGGAGGTAGGAGGTGGAG 60.106 65.000 0.00 0.00 0.00 3.86
1581 1964 0.555369 AGGAGGAGGTAGGAGGTGGA 60.555 60.000 0.00 0.00 0.00 4.02
1582 1965 0.105913 GAGGAGGAGGTAGGAGGTGG 60.106 65.000 0.00 0.00 0.00 4.61
1583 1966 0.105913 GGAGGAGGAGGTAGGAGGTG 60.106 65.000 0.00 0.00 0.00 4.00
1584 1967 0.254395 AGGAGGAGGAGGTAGGAGGT 60.254 60.000 0.00 0.00 0.00 3.85
1585 1968 0.481128 GAGGAGGAGGAGGTAGGAGG 59.519 65.000 0.00 0.00 0.00 4.30
1586 1969 0.481128 GGAGGAGGAGGAGGTAGGAG 59.519 65.000 0.00 0.00 0.00 3.69
1664 2047 3.672295 CTTCGGGAGCCTGGACAGC 62.672 68.421 0.00 0.00 0.00 4.40
1698 2081 1.363080 GGAAGCCGTCGGAGGATAC 59.637 63.158 17.49 0.00 0.00 2.24
1820 2203 2.053747 TGGAGTAGTGGTTGGGGAAT 57.946 50.000 0.00 0.00 0.00 3.01
1911 2294 1.851304 TGGGAGCCCATGTTGAATTC 58.149 50.000 3.58 0.00 41.89 2.17
2000 2383 2.124942 GAGCCCGGCCAGAAGAAG 60.125 66.667 5.55 0.00 0.00 2.85
2131 2514 2.163010 AGAAACTGCGGCATTTCATCAG 59.837 45.455 25.38 9.35 37.30 2.90
2234 2617 2.820197 CCTCCCGATCATCTCGTCAATA 59.180 50.000 0.00 0.00 46.18 1.90
2435 2818 1.071471 CGGGGATACACCATCTGGC 59.929 63.158 0.00 0.00 41.20 4.85
2513 2896 7.068839 TCCTCCTTCAAGTACATCTTCAGATAC 59.931 40.741 0.00 0.00 33.63 2.24
2625 3008 8.567948 TCCACACTCATTTTTCTTTGATACTTC 58.432 33.333 0.00 0.00 0.00 3.01
2660 3043 3.266772 AGAAGAAGGCATTGTCATACCCA 59.733 43.478 0.00 0.00 0.00 4.51
2744 3127 9.334947 ACATTGTATATCTCCACATTCAGAAAG 57.665 33.333 0.00 0.00 0.00 2.62
2748 3131 8.843885 ATGACATTGTATATCTCCACATTCAG 57.156 34.615 0.00 0.00 0.00 3.02
2864 3247 1.985159 AGAACCACAGCCCTCACATAA 59.015 47.619 0.00 0.00 0.00 1.90
3044 3429 6.716628 AGCATCACAGAAGATGAAAAGGTTAA 59.283 34.615 8.03 0.00 46.51 2.01
3466 3855 2.352651 CACATGTGTTTATGGAGGAGCG 59.647 50.000 18.03 0.00 32.32 5.03
3520 3909 7.595502 GCTCAGTTATACATTATGCTACGAACT 59.404 37.037 0.00 0.00 0.00 3.01
3621 4010 3.521560 ACAGGAACAGTACATGCATACG 58.478 45.455 0.00 0.00 0.00 3.06
3627 4016 5.473162 TCATGGAAAACAGGAACAGTACATG 59.527 40.000 0.00 0.00 36.87 3.21
3747 4136 3.671433 GCAGTCATGGTGTTACAATGCAG 60.671 47.826 0.00 0.00 0.00 4.41
3796 4185 5.501156 TGTTGTTTGGGTAATTTTTGGCTT 58.499 33.333 0.00 0.00 0.00 4.35
3811 4200 7.760131 AATGAATTTCTGACACTGTTGTTTG 57.240 32.000 0.00 0.00 35.47 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.