Multiple sequence alignment - TraesCS3A01G103500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G103500 chr3A 100.000 2847 0 0 1 2847 67122819 67125665 0.000000e+00 5258.0
1 TraesCS3A01G103500 chr3A 96.585 205 7 0 2561 2765 451653223 451653427 9.770000e-90 340.0
2 TraesCS3A01G103500 chr3A 76.634 505 83 25 52 542 423159972 423160455 2.190000e-61 246.0
3 TraesCS3A01G103500 chr3B 91.284 1721 82 30 424 2100 91146888 91148584 0.000000e+00 2285.0
4 TraesCS3A01G103500 chr3B 87.222 360 43 3 5 364 91146520 91146876 9.500000e-110 407.0
5 TraesCS3A01G103500 chr3B 79.749 479 81 11 5 478 245252833 245252366 1.630000e-87 333.0
6 TraesCS3A01G103500 chr3B 97.297 37 1 0 2781 2817 91426360 91426396 2.370000e-06 63.9
7 TraesCS3A01G103500 chr3D 93.323 1303 51 14 827 2103 58107576 58108868 0.000000e+00 1892.0
8 TraesCS3A01G103500 chr3D 85.027 187 26 2 2293 2478 58110692 58110877 3.740000e-44 189.0
9 TraesCS3A01G103500 chr3D 85.088 114 13 4 2122 2234 26157748 26157858 2.320000e-21 113.0
10 TraesCS3A01G103500 chr3D 97.500 40 1 0 2781 2820 58110972 58111011 5.090000e-08 69.4
11 TraesCS3A01G103500 chr2A 93.716 366 23 0 1034 1399 4113742 4114107 1.490000e-152 549.0
12 TraesCS3A01G103500 chr2A 95.349 215 9 1 2551 2765 18596685 18596898 9.770000e-90 340.0
13 TraesCS3A01G103500 chr7A 96.585 205 7 0 2561 2765 616469696 616469900 9.770000e-90 340.0
14 TraesCS3A01G103500 chr6A 96.602 206 6 1 2561 2765 19523267 19523472 9.770000e-90 340.0
15 TraesCS3A01G103500 chr6A 96.585 205 7 0 2561 2765 410575755 410575551 9.770000e-90 340.0
16 TraesCS3A01G103500 chr6A 87.143 140 12 3 2122 2259 115034769 115034634 1.370000e-33 154.0
17 TraesCS3A01G103500 chr6A 76.357 258 49 11 51 303 538437717 538437967 8.280000e-26 128.0
18 TraesCS3A01G103500 chr6A 81.944 144 22 3 2122 2264 541426222 541426082 4.980000e-23 119.0
19 TraesCS3A01G103500 chr5A 96.585 205 7 0 2561 2765 313305385 313305589 9.770000e-90 340.0
20 TraesCS3A01G103500 chr5A 96.585 205 7 0 2561 2765 492540266 492540062 9.770000e-90 340.0
21 TraesCS3A01G103500 chr5A 92.275 233 16 2 2533 2765 77367754 77367524 2.110000e-86 329.0
22 TraesCS3A01G103500 chr5A 94.737 38 2 0 2132 2169 318809731 318809694 3.060000e-05 60.2
23 TraesCS3A01G103500 chr4A 96.585 205 7 0 2561 2765 532067618 532067822 9.770000e-90 340.0
24 TraesCS3A01G103500 chr4A 85.667 300 40 3 52 350 10009085 10009382 2.130000e-81 313.0
25 TraesCS3A01G103500 chr6D 84.175 297 45 2 16 311 6957525 6957230 1.290000e-73 287.0
26 TraesCS3A01G103500 chr6D 88.571 140 11 5 2122 2259 93633267 93633403 6.310000e-37 165.0
27 TraesCS3A01G103500 chr6D 79.710 207 32 9 98 300 392510498 392510698 1.060000e-29 141.0
28 TraesCS3A01G103500 chr6D 94.030 67 4 0 2198 2264 340211738 340211672 5.020000e-18 102.0
29 TraesCS3A01G103500 chr5B 76.955 486 81 17 75 541 631647062 631646589 6.090000e-62 248.0
30 TraesCS3A01G103500 chr1B 75.696 539 83 30 15 539 523235201 523235705 2.850000e-55 226.0
31 TraesCS3A01G103500 chr1B 82.482 137 18 5 2122 2255 575439628 575439495 6.450000e-22 115.0
32 TraesCS3A01G103500 chr1B 95.122 41 0 1 607 645 94834129 94834169 2.370000e-06 63.9
33 TraesCS3A01G103500 chr5D 79.402 301 50 11 20 314 129593205 129592911 4.810000e-48 202.0
34 TraesCS3A01G103500 chr2B 94.444 126 7 0 1357 1482 691405867 691405742 8.050000e-46 195.0
35 TraesCS3A01G103500 chr2B 77.448 337 56 16 52 382 476567785 476568107 1.740000e-42 183.0
36 TraesCS3A01G103500 chr2B 83.607 122 7 7 1330 1451 514335094 514335202 5.020000e-18 102.0
37 TraesCS3A01G103500 chr2B 94.000 50 3 0 1197 1246 691405913 691405864 3.040000e-10 76.8
38 TraesCS3A01G103500 chr2B 100.000 38 0 0 1256 1293 514335039 514335076 1.420000e-08 71.3
39 TraesCS3A01G103500 chr6B 76.491 285 52 13 21 300 512864694 512864968 1.060000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G103500 chr3A 67122819 67125665 2846 False 5258.0 5258 100.000 1 2847 1 chr3A.!!$F1 2846
1 TraesCS3A01G103500 chr3B 91146520 91148584 2064 False 1346.0 2285 89.253 5 2100 2 chr3B.!!$F2 2095
2 TraesCS3A01G103500 chr3D 58107576 58111011 3435 False 716.8 1892 91.950 827 2820 3 chr3D.!!$F2 1993
3 TraesCS3A01G103500 chr1B 523235201 523235705 504 False 226.0 226 75.696 15 539 1 chr1B.!!$F2 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
303 305 0.034477 ATAAGCCGAGGGGTTTGGTG 60.034 55.0 4.25 0.0 40.84 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2290 2700 0.747644 TAACACCATGGCCGCTCATG 60.748 55.0 13.04 2.84 42.92 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 1.376037 CCCAAGTCCTCGGCTTGAC 60.376 63.158 16.47 0.00 44.29 3.18
42 43 1.006102 CGGCTTGACGACCAGTTCT 60.006 57.895 0.00 0.00 35.47 3.01
46 47 1.538204 GCTTGACGACCAGTTCTGTGA 60.538 52.381 0.00 0.00 0.00 3.58
92 93 2.358615 GCACACCATGTCGGCTCA 60.359 61.111 0.00 0.00 39.03 4.26
106 107 2.910360 CTCACCGATCATGGGCCA 59.090 61.111 9.61 9.61 0.00 5.36
150 151 4.209538 CAAAGAATGGGACTCATATGCCA 58.790 43.478 0.00 0.00 45.13 4.92
159 160 2.369860 GACTCATATGCCATGACCCTCA 59.630 50.000 0.00 0.00 0.00 3.86
203 204 4.098960 TCCAAAGACTTGACGTACACTTCT 59.901 41.667 0.00 0.00 34.14 2.85
219 220 8.857216 CGTACACTTCTAAGACGTATTTGAATT 58.143 33.333 17.63 11.12 0.00 2.17
250 251 5.920903 TGTTTATCCCTAGATTGTAACCGG 58.079 41.667 0.00 0.00 33.67 5.28
263 264 4.339872 TGTAACCGGTCATGTGTAAACT 57.660 40.909 8.04 0.00 0.00 2.66
267 268 4.877378 ACCGGTCATGTGTAAACTCTAA 57.123 40.909 0.00 0.00 0.00 2.10
303 305 0.034477 ATAAGCCGAGGGGTTTGGTG 60.034 55.000 4.25 0.00 40.84 4.17
314 316 2.039879 GGGGTTTGGTGTGTAGAGACAT 59.960 50.000 0.00 0.00 38.04 3.06
320 322 3.337358 TGGTGTGTAGAGACATGCATTG 58.663 45.455 0.00 0.00 38.04 2.82
326 328 5.174395 GTGTAGAGACATGCATTGAAGACT 58.826 41.667 0.00 0.00 38.04 3.24
350 352 9.256228 ACTTAGAGGTTAGAACTCATTCATACA 57.744 33.333 0.00 0.00 37.29 2.29
356 358 8.762645 AGGTTAGAACTCATTCATACAATCTCA 58.237 33.333 0.00 0.00 37.29 3.27
406 409 7.068593 CCACATCCAGAACCAATACAATACAAT 59.931 37.037 0.00 0.00 0.00 2.71
407 410 9.119418 CACATCCAGAACCAATACAATACAATA 57.881 33.333 0.00 0.00 0.00 1.90
408 411 9.120538 ACATCCAGAACCAATACAATACAATAC 57.879 33.333 0.00 0.00 0.00 1.89
409 412 9.119418 CATCCAGAACCAATACAATACAATACA 57.881 33.333 0.00 0.00 0.00 2.29
410 413 8.731275 TCCAGAACCAATACAATACAATACAG 57.269 34.615 0.00 0.00 0.00 2.74
411 414 7.773224 TCCAGAACCAATACAATACAATACAGG 59.227 37.037 0.00 0.00 0.00 4.00
417 420 6.716628 CCAATACAATACAATACAGGCAGGAT 59.283 38.462 0.00 0.00 0.00 3.24
420 423 4.883585 ACAATACAATACAGGCAGGATGTG 59.116 41.667 0.00 0.00 39.31 3.21
422 425 1.915489 ACAATACAGGCAGGATGTGGA 59.085 47.619 0.00 0.00 39.31 4.02
452 455 1.275291 CTTCAAGAGGGCACGAACCTA 59.725 52.381 0.00 0.00 38.79 3.08
468 472 4.394729 GAACCTAGGTGAAATTGTGTCCA 58.605 43.478 17.14 0.00 0.00 4.02
469 473 4.657814 ACCTAGGTGAAATTGTGTCCAT 57.342 40.909 15.42 0.00 0.00 3.41
524 535 3.917760 CCCCTGTCCGAGATCCGC 61.918 72.222 0.00 0.00 36.84 5.54
525 536 2.835431 CCCTGTCCGAGATCCGCT 60.835 66.667 0.00 0.00 36.84 5.52
531 542 0.458669 GTCCGAGATCCGCTGGTTTA 59.541 55.000 0.00 0.00 36.84 2.01
532 543 0.744874 TCCGAGATCCGCTGGTTTAG 59.255 55.000 0.00 0.00 36.84 1.85
563 575 8.206325 ACATATGTGATGACTTTGTCAATCTC 57.794 34.615 7.78 0.00 45.96 2.75
578 590 3.436704 TCAATCTCAAATTGTGTCGGCTC 59.563 43.478 0.00 0.00 0.00 4.70
579 591 2.839486 TCTCAAATTGTGTCGGCTCT 57.161 45.000 0.00 0.00 0.00 4.09
595 607 3.158676 GGCTCTGTATCTCCGAGGTAAT 58.841 50.000 0.00 0.00 0.00 1.89
610 622 4.490706 GAGGTAATAGGGGTAGGATGTGT 58.509 47.826 0.00 0.00 0.00 3.72
614 626 1.200519 TAGGGGTAGGATGTGTGTGC 58.799 55.000 0.00 0.00 0.00 4.57
619 631 2.201732 GGTAGGATGTGTGTGCATACG 58.798 52.381 9.18 0.00 34.95 3.06
627 639 4.181309 TGTGTGTGCATACGTTCATAGA 57.819 40.909 9.18 0.00 0.00 1.98
635 647 5.400782 GTGCATACGTTCATAGAGATGAGTG 59.599 44.000 0.00 0.00 43.03 3.51
642 654 5.400782 CGTTCATAGAGATGAGTGTATGTGC 59.599 44.000 0.00 0.00 43.03 4.57
643 655 6.276091 GTTCATAGAGATGAGTGTATGTGCA 58.724 40.000 0.00 0.00 43.03 4.57
676 688 3.106242 TCTGCGTTGTACTGTGTTCAT 57.894 42.857 0.00 0.00 0.00 2.57
681 693 6.869388 TCTGCGTTGTACTGTGTTCATAATAA 59.131 34.615 0.00 0.00 0.00 1.40
733 756 2.007608 GCTTTGGTGTTATCCTCCGTC 58.992 52.381 0.00 0.00 0.00 4.79
754 777 7.829211 TCCGTCTTGGAAGAAAATTAATGATCT 59.171 33.333 0.00 0.00 46.38 2.75
786 809 0.311790 TTCGTGTCCGTGGACTGTAC 59.688 55.000 19.17 8.90 44.80 2.90
809 832 1.480545 GTACCGGTACCACCCGTATTT 59.519 52.381 30.84 0.00 46.66 1.40
824 847 4.338682 CCCGTATTTCTACTACTGCTCACT 59.661 45.833 0.00 0.00 0.00 3.41
857 884 5.794894 TGTTTTGTCTTTACCTGGCAAAAA 58.205 33.333 7.63 0.74 39.63 1.94
887 914 8.219546 TGCGAACAAAGATATAAATCCATGAA 57.780 30.769 0.00 0.00 31.98 2.57
1107 1151 0.809241 GCTGGATCTTGGAGCAGTCG 60.809 60.000 0.00 0.00 32.70 4.18
1351 1395 1.433879 CTCTACTCCAAGTCCGGCG 59.566 63.158 0.00 0.00 0.00 6.46
1533 1577 2.862541 GTAAACCGTTTACCAACCCCT 58.137 47.619 19.45 0.00 39.61 4.79
1536 1580 1.974875 CCGTTTACCAACCCCTGCC 60.975 63.158 0.00 0.00 0.00 4.85
1537 1581 1.974875 CGTTTACCAACCCCTGCCC 60.975 63.158 0.00 0.00 0.00 5.36
1544 1588 4.635963 AACCCCTGCCCCCTCCTT 62.636 66.667 0.00 0.00 0.00 3.36
1625 1671 1.741770 CTCGCCGGAAAAGGAGGTG 60.742 63.158 5.05 0.00 36.92 4.00
1935 1981 1.355066 CTCCGAGCTGCCTTCGTTTC 61.355 60.000 9.89 0.00 36.37 2.78
1973 2019 1.337354 TGTCGCGATAAGCTTTGACCA 60.337 47.619 14.06 0.00 45.59 4.02
1987 2033 0.548031 TGACCATGATCCCCTTCTGC 59.452 55.000 0.00 0.00 0.00 4.26
2011 2057 1.440850 CAACATGTGCGTTCTGCCG 60.441 57.895 0.00 0.00 45.60 5.69
2022 2068 0.593128 GTTCTGCCGCAGTGTCAAAT 59.407 50.000 19.77 0.00 32.61 2.32
2030 2077 2.412870 CGCAGTGTCAAATCTGTGGTA 58.587 47.619 0.00 0.00 38.17 3.25
2031 2078 2.805671 CGCAGTGTCAAATCTGTGGTAA 59.194 45.455 0.00 0.00 38.17 2.85
2066 2126 3.648339 GGGCATGTATAATGCACAAGG 57.352 47.619 12.01 0.00 46.98 3.61
2115 2195 6.020971 TGTATGTATGTATGGAGGCGTAAG 57.979 41.667 0.00 0.00 43.44 2.34
2116 2196 5.771165 TGTATGTATGTATGGAGGCGTAAGA 59.229 40.000 0.00 0.00 43.02 2.10
2118 2198 2.821991 ATGTATGGAGGCGTAAGAGC 57.178 50.000 0.00 0.00 43.02 4.09
2119 2199 1.480789 TGTATGGAGGCGTAAGAGCA 58.519 50.000 0.00 0.00 43.02 4.26
2121 2201 3.227614 TGTATGGAGGCGTAAGAGCATA 58.772 45.455 0.00 0.00 43.02 3.14
2122 2202 3.639561 TGTATGGAGGCGTAAGAGCATAA 59.360 43.478 0.00 0.00 43.02 1.90
2123 2203 3.838244 ATGGAGGCGTAAGAGCATAAA 57.162 42.857 0.00 0.00 43.02 1.40
2124 2204 3.838244 TGGAGGCGTAAGAGCATAAAT 57.162 42.857 0.00 0.00 43.02 1.40
2125 2205 4.150897 TGGAGGCGTAAGAGCATAAATT 57.849 40.909 0.00 0.00 43.02 1.82
2126 2206 4.523083 TGGAGGCGTAAGAGCATAAATTT 58.477 39.130 0.00 0.00 43.02 1.82
2127 2207 4.335315 TGGAGGCGTAAGAGCATAAATTTG 59.665 41.667 0.00 0.00 43.02 2.32
2128 2208 4.261197 GGAGGCGTAAGAGCATAAATTTGG 60.261 45.833 0.00 0.00 43.02 3.28
2129 2209 4.523083 AGGCGTAAGAGCATAAATTTGGA 58.477 39.130 0.00 0.00 43.02 3.53
2130 2210 4.576463 AGGCGTAAGAGCATAAATTTGGAG 59.424 41.667 0.00 0.00 43.02 3.86
2132 2212 5.239525 GGCGTAAGAGCATAAATTTGGAGAT 59.760 40.000 0.00 0.00 43.02 2.75
2133 2213 6.138761 GCGTAAGAGCATAAATTTGGAGATG 58.861 40.000 0.00 0.00 43.02 2.90
2134 2214 6.238484 GCGTAAGAGCATAAATTTGGAGATGT 60.238 38.462 0.00 0.00 43.02 3.06
2135 2215 7.042051 GCGTAAGAGCATAAATTTGGAGATGTA 60.042 37.037 0.00 0.00 43.02 2.29
2136 2216 8.826710 CGTAAGAGCATAAATTTGGAGATGTAA 58.173 33.333 0.00 0.00 43.02 2.41
2210 2290 5.913137 AAAAATGTGACAACTCCAACAGA 57.087 34.783 0.00 0.00 0.00 3.41
2213 2623 3.836365 TGTGACAACTCCAACAGATGA 57.164 42.857 0.00 0.00 0.00 2.92
2221 2631 5.889853 ACAACTCCAACAGATGATGCATATT 59.110 36.000 0.00 0.00 0.00 1.28
2226 2636 6.124340 TCCAACAGATGATGCATATTGAAGT 58.876 36.000 0.00 0.00 0.00 3.01
2227 2637 6.604396 TCCAACAGATGATGCATATTGAAGTT 59.396 34.615 0.00 0.00 0.00 2.66
2229 2639 7.255569 CAACAGATGATGCATATTGAAGTTGT 58.744 34.615 0.00 0.00 0.00 3.32
2231 2641 8.510243 ACAGATGATGCATATTGAAGTTGTAA 57.490 30.769 0.00 0.00 0.00 2.41
2232 2642 8.959548 ACAGATGATGCATATTGAAGTTGTAAA 58.040 29.630 0.00 0.00 0.00 2.01
2233 2643 9.791820 CAGATGATGCATATTGAAGTTGTAAAA 57.208 29.630 0.00 0.00 0.00 1.52
2234 2644 9.793252 AGATGATGCATATTGAAGTTGTAAAAC 57.207 29.630 0.00 0.00 0.00 2.43
2235 2645 9.793252 GATGATGCATATTGAAGTTGTAAAACT 57.207 29.630 0.00 0.00 33.76 2.66
2237 2647 8.575589 TGATGCATATTGAAGTTGTAAAACTGT 58.424 29.630 0.00 0.00 32.47 3.55
2240 2650 9.672086 TGCATATTGAAGTTGTAAAACTGTAAC 57.328 29.630 0.00 0.00 32.47 2.50
2241 2651 9.893305 GCATATTGAAGTTGTAAAACTGTAACT 57.107 29.630 0.00 0.00 35.06 2.24
2244 2654 7.830940 TTGAAGTTGTAAAACTGTAACTCGA 57.169 32.000 0.00 0.00 32.61 4.04
2247 2657 7.331440 TGAAGTTGTAAAACTGTAACTCGAACA 59.669 33.333 0.00 0.00 32.61 3.18
2250 2660 7.709613 AGTTGTAAAACTGTAACTCGAACAGAT 59.290 33.333 19.86 7.58 45.89 2.90
2252 2662 7.204604 TGTAAAACTGTAACTCGAACAGATGA 58.795 34.615 19.86 2.10 45.89 2.92
2253 2663 7.870954 TGTAAAACTGTAACTCGAACAGATGAT 59.129 33.333 19.86 6.35 45.89 2.45
2254 2664 6.712241 AAACTGTAACTCGAACAGATGATG 57.288 37.500 19.86 0.00 45.89 3.07
2255 2665 4.177026 ACTGTAACTCGAACAGATGATGC 58.823 43.478 19.86 0.00 45.89 3.91
2256 2666 4.176271 CTGTAACTCGAACAGATGATGCA 58.824 43.478 9.67 0.00 45.89 3.96
2260 2670 5.633830 AACTCGAACAGATGATGCAAAAT 57.366 34.783 0.00 0.00 0.00 1.82
2261 2671 4.978186 ACTCGAACAGATGATGCAAAATG 58.022 39.130 0.00 0.00 0.00 2.32
2265 2675 5.125900 TCGAACAGATGATGCAAAATGGAAT 59.874 36.000 0.00 0.00 0.00 3.01
2267 2677 6.974048 CGAACAGATGATGCAAAATGGAATTA 59.026 34.615 0.00 0.00 33.67 1.40
2269 2679 6.812998 ACAGATGATGCAAAATGGAATTAGG 58.187 36.000 0.00 0.00 33.67 2.69
2270 2680 6.381994 ACAGATGATGCAAAATGGAATTAGGT 59.618 34.615 0.00 0.00 33.67 3.08
2271 2681 6.700081 CAGATGATGCAAAATGGAATTAGGTG 59.300 38.462 0.00 0.00 33.67 4.00
2272 2682 5.999205 TGATGCAAAATGGAATTAGGTGT 57.001 34.783 0.00 0.00 33.67 4.16
2274 2684 7.473735 TGATGCAAAATGGAATTAGGTGTAA 57.526 32.000 0.00 0.00 33.67 2.41
2275 2685 7.901029 TGATGCAAAATGGAATTAGGTGTAAA 58.099 30.769 0.00 0.00 33.67 2.01
2276 2686 8.370940 TGATGCAAAATGGAATTAGGTGTAAAA 58.629 29.630 0.00 0.00 33.67 1.52
2278 2688 8.371770 TGCAAAATGGAATTAGGTGTAAAAAC 57.628 30.769 0.00 0.00 33.67 2.43
2280 2690 9.699703 GCAAAATGGAATTAGGTGTAAAAACTA 57.300 29.630 0.00 0.00 33.67 2.24
2284 2694 7.989416 TGGAATTAGGTGTAAAAACTAGTGG 57.011 36.000 0.00 0.00 0.00 4.00
2285 2695 6.943718 TGGAATTAGGTGTAAAAACTAGTGGG 59.056 38.462 0.00 0.00 0.00 4.61
2287 2697 5.571791 TTAGGTGTAAAAACTAGTGGGCT 57.428 39.130 0.00 0.00 0.00 5.19
2288 2698 4.017177 AGGTGTAAAAACTAGTGGGCTC 57.983 45.455 0.00 0.00 0.00 4.70
2290 2700 3.501062 GGTGTAAAAACTAGTGGGCTCAC 59.499 47.826 9.29 9.29 43.93 3.51
2327 4021 3.249917 GTTAATGGCCAAATGGTTGACG 58.750 45.455 10.96 0.00 36.83 4.35
2328 4022 0.607620 AATGGCCAAATGGTTGACGG 59.392 50.000 10.96 0.00 36.83 4.79
2331 4025 2.569354 GCCAAATGGTTGACGGCCA 61.569 57.895 2.24 0.00 40.68 5.36
2368 4063 2.111878 GTGTGTGGAGGCTGTGCT 59.888 61.111 0.00 0.00 0.00 4.40
2369 4064 2.111669 TGTGTGGAGGCTGTGCTG 59.888 61.111 0.00 0.00 0.00 4.41
2377 4072 0.670162 GAGGCTGTGCTGCTTCAAAA 59.330 50.000 0.00 0.00 38.65 2.44
2380 4075 0.386838 GCTGTGCTGCTTCAAAACCT 59.613 50.000 0.00 0.00 0.00 3.50
2400 4095 2.362369 CCTGTGGCACGAGGAGGAT 61.362 63.158 23.45 0.00 0.00 3.24
2407 4102 0.747255 GCACGAGGAGGATGAAGCTA 59.253 55.000 0.00 0.00 0.00 3.32
2408 4103 1.137086 GCACGAGGAGGATGAAGCTAA 59.863 52.381 0.00 0.00 0.00 3.09
2414 4109 4.568760 CGAGGAGGATGAAGCTAAAACTTC 59.431 45.833 0.00 0.00 45.19 3.01
2421 4116 1.393883 GAAGCTAAAACTTCGCTCCCG 59.606 52.381 0.00 0.00 36.96 5.14
2422 4117 0.320697 AGCTAAAACTTCGCTCCCGT 59.679 50.000 0.00 0.00 35.54 5.28
2427 4122 2.377628 AAACTTCGCTCCCGTGCTGA 62.378 55.000 0.00 0.00 35.54 4.26
2430 4125 3.158537 TTCGCTCCCGTGCTGACAA 62.159 57.895 0.00 0.00 35.54 3.18
2439 4134 0.110238 CGTGCTGACAATTGGGTTCG 60.110 55.000 10.83 3.37 0.00 3.95
2443 4138 1.882352 GCTGACAATTGGGTTCGGAGT 60.882 52.381 10.83 0.00 0.00 3.85
2444 4139 1.806542 CTGACAATTGGGTTCGGAGTG 59.193 52.381 10.83 0.00 0.00 3.51
2460 4155 0.318762 AGTGAGCTCCAAACGAGTCC 59.681 55.000 12.15 0.00 41.10 3.85
2463 4158 2.046217 GCTCCAAACGAGTCCCCC 60.046 66.667 0.00 0.00 41.10 5.40
2464 4159 2.264794 CTCCAAACGAGTCCCCCG 59.735 66.667 0.00 0.00 33.51 5.73
2465 4160 3.952628 CTCCAAACGAGTCCCCCGC 62.953 68.421 0.00 0.00 33.51 6.13
2494 4202 2.332063 ATATGGCGTTTGAGAGGTGG 57.668 50.000 0.00 0.00 0.00 4.61
2497 4205 1.271856 TGGCGTTTGAGAGGTGGATA 58.728 50.000 0.00 0.00 0.00 2.59
2498 4206 1.066430 TGGCGTTTGAGAGGTGGATAC 60.066 52.381 0.00 0.00 0.00 2.24
2499 4207 1.207329 GGCGTTTGAGAGGTGGATACT 59.793 52.381 0.00 0.00 37.61 2.12
2501 4209 3.491104 GGCGTTTGAGAGGTGGATACTAG 60.491 52.174 0.00 0.00 37.61 2.57
2502 4210 3.380637 GCGTTTGAGAGGTGGATACTAGA 59.619 47.826 0.00 0.00 37.61 2.43
2503 4211 4.498345 GCGTTTGAGAGGTGGATACTAGAG 60.498 50.000 0.00 0.00 37.61 2.43
2504 4212 4.882427 CGTTTGAGAGGTGGATACTAGAGA 59.118 45.833 0.00 0.00 37.61 3.10
2505 4213 5.008217 CGTTTGAGAGGTGGATACTAGAGAG 59.992 48.000 0.00 0.00 37.61 3.20
2506 4214 4.093472 TGAGAGGTGGATACTAGAGAGC 57.907 50.000 0.00 0.00 37.61 4.09
2507 4215 3.719479 TGAGAGGTGGATACTAGAGAGCT 59.281 47.826 0.00 0.00 37.61 4.09
2508 4216 4.072131 GAGAGGTGGATACTAGAGAGCTG 58.928 52.174 0.00 0.00 37.61 4.24
2509 4217 3.461831 AGAGGTGGATACTAGAGAGCTGT 59.538 47.826 0.00 0.00 37.61 4.40
2510 4218 4.079443 AGAGGTGGATACTAGAGAGCTGTT 60.079 45.833 0.00 0.00 37.61 3.16
2512 4220 5.959512 AGGTGGATACTAGAGAGCTGTTAT 58.040 41.667 0.00 0.00 37.61 1.89
2513 4221 6.377912 AGGTGGATACTAGAGAGCTGTTATT 58.622 40.000 0.00 0.00 37.61 1.40
2563 4275 9.717942 ATAGTTATTATGCAGTTTGAGATCTCC 57.282 33.333 20.03 4.84 0.00 3.71
2564 4276 7.800092 AGTTATTATGCAGTTTGAGATCTCCT 58.200 34.615 20.03 7.19 0.00 3.69
2565 4277 8.270744 AGTTATTATGCAGTTTGAGATCTCCTT 58.729 33.333 20.03 4.47 0.00 3.36
2566 4278 8.897752 GTTATTATGCAGTTTGAGATCTCCTTT 58.102 33.333 20.03 0.52 0.00 3.11
2567 4279 6.748333 TTATGCAGTTTGAGATCTCCTTTG 57.252 37.500 20.03 13.25 0.00 2.77
2568 4280 3.415212 TGCAGTTTGAGATCTCCTTTGG 58.585 45.455 20.03 8.15 0.00 3.28
2569 4281 3.181440 TGCAGTTTGAGATCTCCTTTGGT 60.181 43.478 20.03 0.00 0.00 3.67
2570 4282 3.823304 GCAGTTTGAGATCTCCTTTGGTT 59.177 43.478 20.03 0.00 0.00 3.67
2571 4283 4.279420 GCAGTTTGAGATCTCCTTTGGTTT 59.721 41.667 20.03 0.00 0.00 3.27
2572 4284 5.473504 GCAGTTTGAGATCTCCTTTGGTTTA 59.526 40.000 20.03 0.00 0.00 2.01
2573 4285 6.016276 GCAGTTTGAGATCTCCTTTGGTTTAA 60.016 38.462 20.03 1.39 0.00 1.52
2574 4286 7.470009 GCAGTTTGAGATCTCCTTTGGTTTAAA 60.470 37.037 20.03 7.51 0.00 1.52
2575 4287 8.078596 CAGTTTGAGATCTCCTTTGGTTTAAAG 58.921 37.037 20.03 0.00 44.35 1.85
2607 4319 9.707957 TCATAGGAATTCTAGAGGATAGGATTC 57.292 37.037 5.23 7.20 38.32 2.52
2608 4320 9.713684 CATAGGAATTCTAGAGGATAGGATTCT 57.286 37.037 13.16 5.20 38.80 2.40
2640 4352 6.493189 TTTTTCCTTTAGAGCCATTTGGTT 57.507 33.333 0.00 0.00 37.57 3.67
2641 4353 5.722021 TTTCCTTTAGAGCCATTTGGTTC 57.278 39.130 5.38 5.38 44.60 3.62
2642 4354 4.380843 TCCTTTAGAGCCATTTGGTTCA 57.619 40.909 14.77 0.09 46.37 3.18
2643 4355 4.934356 TCCTTTAGAGCCATTTGGTTCAT 58.066 39.130 14.77 4.10 46.37 2.57
2644 4356 6.073447 TCCTTTAGAGCCATTTGGTTCATA 57.927 37.500 14.77 3.29 46.37 2.15
2645 4357 6.672593 TCCTTTAGAGCCATTTGGTTCATAT 58.327 36.000 14.77 0.00 46.37 1.78
2646 4358 6.547141 TCCTTTAGAGCCATTTGGTTCATATG 59.453 38.462 14.77 0.00 46.37 1.78
2647 4359 6.547141 CCTTTAGAGCCATTTGGTTCATATGA 59.453 38.462 14.77 0.00 46.37 2.15
2648 4360 7.068593 CCTTTAGAGCCATTTGGTTCATATGAA 59.931 37.037 14.23 14.23 46.37 2.57
2649 4361 8.537728 TTTAGAGCCATTTGGTTCATATGAAT 57.462 30.769 20.65 2.08 46.37 2.57
2650 4362 6.401047 AGAGCCATTTGGTTCATATGAATG 57.599 37.500 20.65 13.87 46.37 2.67
2651 4363 5.303589 AGAGCCATTTGGTTCATATGAATGG 59.696 40.000 22.60 22.60 46.37 3.16
2652 4364 5.210430 AGCCATTTGGTTCATATGAATGGA 58.790 37.500 27.82 14.33 46.06 3.41
2653 4365 5.842328 AGCCATTTGGTTCATATGAATGGAT 59.158 36.000 27.82 22.47 46.06 3.41
2654 4366 6.328148 AGCCATTTGGTTCATATGAATGGATT 59.672 34.615 27.82 17.03 46.06 3.01
2655 4367 6.647895 GCCATTTGGTTCATATGAATGGATTC 59.352 38.462 27.82 13.61 46.06 2.52
2656 4368 7.472381 GCCATTTGGTTCATATGAATGGATTCT 60.472 37.037 27.82 8.77 46.06 2.40
2657 4369 8.426489 CCATTTGGTTCATATGAATGGATTCTT 58.574 33.333 22.53 4.10 46.06 2.52
2662 4374 9.300681 TGGTTCATATGAATGGATTCTTATTCC 57.699 33.333 20.65 12.38 35.94 3.01
2663 4375 9.525826 GGTTCATATGAATGGATTCTTATTCCT 57.474 33.333 20.65 5.25 35.94 3.36
2671 4383 9.392506 TGAATGGATTCTTATTCCTACATAGGA 57.607 33.333 3.36 3.36 42.54 2.94
2689 4401 3.493767 GGATTGGTTCCTATCCTCCAC 57.506 52.381 19.71 0.00 41.78 4.02
2690 4402 2.777692 GGATTGGTTCCTATCCTCCACA 59.222 50.000 19.71 0.00 41.78 4.17
2691 4403 3.395941 GGATTGGTTCCTATCCTCCACAT 59.604 47.826 19.71 0.00 41.78 3.21
2692 4404 4.141158 GGATTGGTTCCTATCCTCCACATT 60.141 45.833 19.71 0.00 41.78 2.71
2693 4405 4.946160 TTGGTTCCTATCCTCCACATTT 57.054 40.909 0.00 0.00 0.00 2.32
2694 4406 4.503714 TGGTTCCTATCCTCCACATTTC 57.496 45.455 0.00 0.00 0.00 2.17
2695 4407 3.849574 TGGTTCCTATCCTCCACATTTCA 59.150 43.478 0.00 0.00 0.00 2.69
2696 4408 4.478317 TGGTTCCTATCCTCCACATTTCAT 59.522 41.667 0.00 0.00 0.00 2.57
2697 4409 5.669904 TGGTTCCTATCCTCCACATTTCATA 59.330 40.000 0.00 0.00 0.00 2.15
2698 4410 6.183361 TGGTTCCTATCCTCCACATTTCATAG 60.183 42.308 0.00 0.00 0.00 2.23
2699 4411 6.043243 GGTTCCTATCCTCCACATTTCATAGA 59.957 42.308 0.00 0.00 0.00 1.98
2700 4412 7.420214 GGTTCCTATCCTCCACATTTCATAGAA 60.420 40.741 0.00 0.00 0.00 2.10
2701 4413 7.690454 TCCTATCCTCCACATTTCATAGAAA 57.310 36.000 0.00 0.00 0.00 2.52
2702 4414 8.101309 TCCTATCCTCCACATTTCATAGAAAA 57.899 34.615 0.00 0.00 0.00 2.29
2703 4415 8.556589 TCCTATCCTCCACATTTCATAGAAAAA 58.443 33.333 0.00 0.00 0.00 1.94
2704 4416 9.359653 CCTATCCTCCACATTTCATAGAAAAAT 57.640 33.333 0.00 0.00 0.00 1.82
2730 4442 7.823745 AAAAAGAGCCTAGACTCAATGAAAA 57.176 32.000 8.89 0.00 39.26 2.29
2731 4443 7.823745 AAAAGAGCCTAGACTCAATGAAAAA 57.176 32.000 8.89 0.00 39.26 1.94
2767 4479 6.462552 TCAACCAAATGACATCTTGTTGAA 57.537 33.333 17.40 7.47 0.00 2.69
2768 4480 6.272318 TCAACCAAATGACATCTTGTTGAAC 58.728 36.000 17.40 0.00 0.00 3.18
2769 4481 5.200368 ACCAAATGACATCTTGTTGAACC 57.800 39.130 0.00 0.00 0.00 3.62
2770 4482 4.648762 ACCAAATGACATCTTGTTGAACCA 59.351 37.500 0.00 0.00 0.00 3.67
2771 4483 5.128499 ACCAAATGACATCTTGTTGAACCAA 59.872 36.000 0.00 0.00 0.00 3.67
2772 4484 6.047870 CCAAATGACATCTTGTTGAACCAAA 58.952 36.000 0.00 0.00 0.00 3.28
2773 4485 6.538021 CCAAATGACATCTTGTTGAACCAAAA 59.462 34.615 0.00 0.00 0.00 2.44
2774 4486 7.254522 CCAAATGACATCTTGTTGAACCAAAAG 60.255 37.037 0.00 0.00 0.00 2.27
2775 4487 6.713762 ATGACATCTTGTTGAACCAAAAGA 57.286 33.333 0.02 0.02 33.45 2.52
2776 4488 6.135290 TGACATCTTGTTGAACCAAAAGAG 57.865 37.500 3.53 0.02 32.50 2.85
2777 4489 5.067674 TGACATCTTGTTGAACCAAAAGAGG 59.932 40.000 6.90 6.90 36.71 3.69
2778 4490 4.202151 ACATCTTGTTGAACCAAAAGAGGC 60.202 41.667 8.00 0.00 34.64 4.70
2779 4491 2.693074 TCTTGTTGAACCAAAAGAGGCC 59.307 45.455 0.00 0.00 0.00 5.19
2780 4492 2.452600 TGTTGAACCAAAAGAGGCCT 57.547 45.000 3.86 3.86 0.00 5.19
2781 4493 2.031120 TGTTGAACCAAAAGAGGCCTG 58.969 47.619 12.00 0.00 0.00 4.85
2782 4494 2.306847 GTTGAACCAAAAGAGGCCTGA 58.693 47.619 12.00 0.00 0.00 3.86
2823 4535 9.069082 TCTAATAGAGTTGCTCTTACATACTCC 57.931 37.037 3.87 0.00 41.50 3.85
2824 4536 7.661536 AATAGAGTTGCTCTTACATACTCCA 57.338 36.000 3.87 0.00 41.50 3.86
2825 4537 7.661536 ATAGAGTTGCTCTTACATACTCCAA 57.338 36.000 3.87 0.00 41.50 3.53
2826 4538 5.971763 AGAGTTGCTCTTACATACTCCAAG 58.028 41.667 0.00 0.00 37.60 3.61
2827 4539 4.508662 AGTTGCTCTTACATACTCCAAGC 58.491 43.478 0.00 0.00 0.00 4.01
2828 4540 3.543680 TGCTCTTACATACTCCAAGCC 57.456 47.619 0.00 0.00 0.00 4.35
2829 4541 2.837591 TGCTCTTACATACTCCAAGCCA 59.162 45.455 0.00 0.00 0.00 4.75
2830 4542 3.198872 GCTCTTACATACTCCAAGCCAC 58.801 50.000 0.00 0.00 0.00 5.01
2831 4543 3.118592 GCTCTTACATACTCCAAGCCACT 60.119 47.826 0.00 0.00 0.00 4.00
2832 4544 4.688021 CTCTTACATACTCCAAGCCACTC 58.312 47.826 0.00 0.00 0.00 3.51
2833 4545 3.451178 TCTTACATACTCCAAGCCACTCC 59.549 47.826 0.00 0.00 0.00 3.85
2834 4546 1.656587 ACATACTCCAAGCCACTCCA 58.343 50.000 0.00 0.00 0.00 3.86
2835 4547 1.556911 ACATACTCCAAGCCACTCCAG 59.443 52.381 0.00 0.00 0.00 3.86
2836 4548 1.134280 CATACTCCAAGCCACTCCAGG 60.134 57.143 0.00 0.00 0.00 4.45
2837 4549 0.909610 TACTCCAAGCCACTCCAGGG 60.910 60.000 0.00 0.00 0.00 4.45
2844 4556 3.569210 CCACTCCAGGGCACACCA 61.569 66.667 0.00 0.00 43.89 4.17
2845 4557 2.515398 CACTCCAGGGCACACCAA 59.485 61.111 0.00 0.00 43.89 3.67
2846 4558 1.898574 CACTCCAGGGCACACCAAC 60.899 63.158 0.00 0.00 43.89 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.538877 AGGACTTGGGGTTCTATCTTCATA 58.461 41.667 0.00 0.00 30.61 2.15
1 2 4.375313 AGGACTTGGGGTTCTATCTTCAT 58.625 43.478 0.00 0.00 30.61 2.57
2 3 3.775316 GAGGACTTGGGGTTCTATCTTCA 59.225 47.826 0.00 0.00 33.05 3.02
3 4 3.181474 CGAGGACTTGGGGTTCTATCTTC 60.181 52.174 0.00 0.00 33.05 2.87
13 14 2.045926 CAAGCCGAGGACTTGGGG 60.046 66.667 7.68 0.00 40.68 4.96
32 33 2.552743 TCAGTAGTCACAGAACTGGTCG 59.447 50.000 6.76 0.00 40.79 4.79
42 43 3.361281 AGGATACCGTCAGTAGTCACA 57.639 47.619 0.00 0.00 33.42 3.58
92 93 4.195334 GCCTGGCCCATGATCGGT 62.195 66.667 7.66 0.00 0.00 4.69
121 122 3.117701 TGAGTCCCATTCTTTGGTTGTGA 60.118 43.478 0.00 0.00 44.83 3.58
150 151 3.162666 TCTTGAGTACGTTGAGGGTCAT 58.837 45.455 0.00 0.00 0.00 3.06
151 152 2.589720 TCTTGAGTACGTTGAGGGTCA 58.410 47.619 0.00 0.00 0.00 4.02
153 154 2.233922 CCATCTTGAGTACGTTGAGGGT 59.766 50.000 0.00 0.00 0.00 4.34
159 160 4.141914 GGAGGATTCCATCTTGAGTACGTT 60.142 45.833 5.29 0.00 43.45 3.99
183 184 6.916932 GTCTTAGAAGTGTACGTCAAGTCTTT 59.083 38.462 0.00 0.00 0.00 2.52
203 204 9.325198 ACATGCTGATAATTCAAATACGTCTTA 57.675 29.630 0.00 0.00 0.00 2.10
219 220 7.977818 ACAATCTAGGGATAAACATGCTGATA 58.022 34.615 0.00 0.00 0.00 2.15
233 234 3.104519 TGACCGGTTACAATCTAGGGA 57.895 47.619 9.42 0.00 0.00 4.20
250 251 6.257193 CGGGGTATTTAGAGTTTACACATGAC 59.743 42.308 0.00 0.00 0.00 3.06
263 264 7.201974 GCTTATATAGGCATCGGGGTATTTAGA 60.202 40.741 11.70 0.00 0.00 2.10
267 268 5.291905 GCTTATATAGGCATCGGGGTATT 57.708 43.478 11.70 0.00 0.00 1.89
303 305 5.174395 AGTCTTCAATGCATGTCTCTACAC 58.826 41.667 0.00 0.00 38.78 2.90
314 316 6.605471 TCTAACCTCTAAGTCTTCAATGCA 57.395 37.500 0.00 0.00 0.00 3.96
320 322 8.524487 TGAATGAGTTCTAACCTCTAAGTCTTC 58.476 37.037 0.00 0.00 35.33 2.87
377 380 5.506730 TGTATTGGTTCTGGATGTGGTAA 57.493 39.130 0.00 0.00 0.00 2.85
382 385 9.120538 GTATTGTATTGTATTGGTTCTGGATGT 57.879 33.333 0.00 0.00 0.00 3.06
389 392 7.328277 TGCCTGTATTGTATTGTATTGGTTC 57.672 36.000 0.00 0.00 0.00 3.62
392 395 6.061441 TCCTGCCTGTATTGTATTGTATTGG 58.939 40.000 0.00 0.00 0.00 3.16
406 409 1.656587 AACTCCACATCCTGCCTGTA 58.343 50.000 0.00 0.00 0.00 2.74
407 410 0.773644 AAACTCCACATCCTGCCTGT 59.226 50.000 0.00 0.00 0.00 4.00
408 411 1.915141 AAAACTCCACATCCTGCCTG 58.085 50.000 0.00 0.00 0.00 4.85
409 412 2.290960 GGTAAAACTCCACATCCTGCCT 60.291 50.000 0.00 0.00 0.00 4.75
410 413 2.092323 GGTAAAACTCCACATCCTGCC 58.908 52.381 0.00 0.00 0.00 4.85
411 414 3.010420 GAGGTAAAACTCCACATCCTGC 58.990 50.000 0.00 0.00 0.00 4.85
417 420 5.611374 CTCTTGAAGAGGTAAAACTCCACA 58.389 41.667 14.32 0.00 38.67 4.17
444 447 4.062991 GACACAATTTCACCTAGGTTCGT 58.937 43.478 13.15 0.14 0.00 3.85
452 455 6.976934 AGTAAAATGGACACAATTTCACCT 57.023 33.333 0.00 0.00 32.31 4.00
469 473 9.871238 GATGATCTTGGTACACTAGAAGTAAAA 57.129 33.333 0.00 0.00 39.29 1.52
510 521 1.949847 AACCAGCGGATCTCGGACAG 61.950 60.000 1.50 0.00 39.69 3.51
513 524 0.744874 CTAAACCAGCGGATCTCGGA 59.255 55.000 1.50 0.00 39.69 4.55
531 542 2.432146 AGTCATCACATATGTCGGTGCT 59.568 45.455 5.07 7.32 35.04 4.40
532 543 2.826428 AGTCATCACATATGTCGGTGC 58.174 47.619 5.07 5.44 35.04 5.01
541 553 8.620116 TTTGAGATTGACAAAGTCATCACATA 57.380 30.769 0.12 0.48 42.40 2.29
563 575 3.935203 AGATACAGAGCCGACACAATTTG 59.065 43.478 0.00 0.00 0.00 2.32
578 590 4.017808 CCCCTATTACCTCGGAGATACAG 58.982 52.174 6.58 0.00 33.89 2.74
579 591 3.400322 ACCCCTATTACCTCGGAGATACA 59.600 47.826 6.58 0.00 33.89 2.29
595 607 1.200519 GCACACACATCCTACCCCTA 58.799 55.000 0.00 0.00 0.00 3.53
610 622 5.067805 ACTCATCTCTATGAACGTATGCACA 59.932 40.000 0.00 0.00 41.57 4.57
614 626 8.666580 CATACACTCATCTCTATGAACGTATG 57.333 38.462 15.33 15.33 42.92 2.39
619 631 6.276091 TGCACATACACTCATCTCTATGAAC 58.724 40.000 0.00 0.00 41.57 3.18
627 639 5.756833 CACATACATGCACATACACTCATCT 59.243 40.000 0.00 0.00 0.00 2.90
635 647 5.007039 CAGAACCTCACATACATGCACATAC 59.993 44.000 0.00 0.00 0.00 2.39
642 654 2.621338 ACGCAGAACCTCACATACATG 58.379 47.619 0.00 0.00 0.00 3.21
643 655 3.002791 CAACGCAGAACCTCACATACAT 58.997 45.455 0.00 0.00 0.00 2.29
691 703 5.063204 GCCTCCGCATGCCATATATTATTA 58.937 41.667 13.15 0.00 34.03 0.98
699 711 1.102809 CAAAGCCTCCGCATGCCATA 61.103 55.000 13.15 0.00 37.52 2.74
700 712 2.043652 AAAGCCTCCGCATGCCAT 60.044 55.556 13.15 0.00 37.52 4.40
701 713 3.063704 CAAAGCCTCCGCATGCCA 61.064 61.111 13.15 0.00 37.52 4.92
702 714 3.830192 CCAAAGCCTCCGCATGCC 61.830 66.667 13.15 0.00 37.52 4.40
703 715 3.064324 ACCAAAGCCTCCGCATGC 61.064 61.111 7.91 7.91 37.52 4.06
733 756 9.933723 ACCAAAGATCATTAATTTTCTTCCAAG 57.066 29.630 9.14 3.77 0.00 3.61
745 768 7.976734 ACGAACAACAAAACCAAAGATCATTAA 59.023 29.630 0.00 0.00 0.00 1.40
754 777 3.576648 GGACACGAACAACAAAACCAAA 58.423 40.909 0.00 0.00 0.00 3.28
758 781 2.170770 CACGGACACGAACAACAAAAC 58.829 47.619 0.00 0.00 44.60 2.43
800 823 4.097589 GTGAGCAGTAGTAGAAATACGGGT 59.902 45.833 0.00 0.00 32.90 5.28
809 832 4.468765 ACTACGAGTGAGCAGTAGTAGA 57.531 45.455 23.46 0.00 46.22 2.59
824 847 7.436080 CAGGTAAAGACAAAACAAGTACTACGA 59.564 37.037 0.00 0.00 0.00 3.43
862 889 7.800155 TCATGGATTTATATCTTTGTTCGCA 57.200 32.000 0.00 0.00 0.00 5.10
887 914 7.380602 GCAAAACGGATATAGTACTACGACATT 59.619 37.037 15.20 6.50 0.00 2.71
890 917 5.626955 GGCAAAACGGATATAGTACTACGAC 59.373 44.000 15.20 5.80 0.00 4.34
891 918 5.560760 CGGCAAAACGGATATAGTACTACGA 60.561 44.000 15.20 3.66 0.00 3.43
892 919 4.614284 CGGCAAAACGGATATAGTACTACG 59.386 45.833 4.31 6.91 0.00 3.51
895 922 3.387397 GCGGCAAAACGGATATAGTACT 58.613 45.455 0.00 0.00 0.00 2.73
899 926 1.878953 AGGCGGCAAAACGGATATAG 58.121 50.000 13.08 0.00 0.00 1.31
1239 1283 3.499737 GCGAACATGGGGAGCACG 61.500 66.667 0.00 0.00 0.00 5.34
1351 1395 3.123620 CTTGGCCTCGAGCTGCAC 61.124 66.667 6.99 0.00 43.05 4.57
1366 1410 3.403558 GAGGAAGGCCGGGAGCTT 61.404 66.667 2.18 0.00 43.05 3.74
1474 1518 2.499827 CCTCGATCTCCCGTTCCCC 61.500 68.421 0.00 0.00 0.00 4.81
1519 1563 1.974875 GGGCAGGGGTTGGTAAACG 60.975 63.158 0.00 0.00 37.15 3.60
1552 1596 9.085645 TCCTATATGTTCACATTAGTTACCGAT 57.914 33.333 0.00 0.00 37.76 4.18
1556 1602 9.395707 CGACTCCTATATGTTCACATTAGTTAC 57.604 37.037 0.00 0.00 37.76 2.50
1650 1696 1.530183 GCCTTGGCATCCATCTCCC 60.530 63.158 6.79 0.00 31.53 4.30
1973 2019 1.213926 GACCAAGCAGAAGGGGATCAT 59.786 52.381 0.00 0.00 0.00 2.45
1987 2033 1.603802 AGAACGCACATGTTGACCAAG 59.396 47.619 0.00 0.00 30.75 3.61
2011 2057 4.829064 TTTACCACAGATTTGACACTGC 57.171 40.909 0.00 0.00 37.61 4.40
2012 2058 6.377327 AGTTTTACCACAGATTTGACACTG 57.623 37.500 0.00 0.00 39.65 3.66
2013 2059 6.377146 ACAAGTTTTACCACAGATTTGACACT 59.623 34.615 0.00 0.00 0.00 3.55
2018 2064 6.950545 TCGTACAAGTTTTACCACAGATTTG 58.049 36.000 0.00 0.00 0.00 2.32
2022 2068 5.521010 CACTTCGTACAAGTTTTACCACAGA 59.479 40.000 7.65 0.00 0.00 3.41
2030 2077 2.645802 TGCCCACTTCGTACAAGTTTT 58.354 42.857 7.65 0.00 0.00 2.43
2031 2078 2.335316 TGCCCACTTCGTACAAGTTT 57.665 45.000 7.65 0.00 0.00 2.66
2077 2137 7.335627 ACATACATACAAAGTAGCTAAGCCAA 58.664 34.615 0.00 0.00 0.00 4.52
2090 2150 5.284861 ACGCCTCCATACATACATACAAA 57.715 39.130 0.00 0.00 0.00 2.83
2188 2268 5.913137 TCTGTTGGAGTTGTCACATTTTT 57.087 34.783 0.00 0.00 0.00 1.94
2189 2269 5.593909 TCATCTGTTGGAGTTGTCACATTTT 59.406 36.000 0.00 0.00 0.00 1.82
2190 2270 5.132502 TCATCTGTTGGAGTTGTCACATTT 58.867 37.500 0.00 0.00 0.00 2.32
2191 2271 4.717877 TCATCTGTTGGAGTTGTCACATT 58.282 39.130 0.00 0.00 0.00 2.71
2194 2274 3.120060 GCATCATCTGTTGGAGTTGTCAC 60.120 47.826 0.00 0.00 0.00 3.67
2198 2278 6.038936 TCAATATGCATCATCTGTTGGAGTTG 59.961 38.462 0.19 5.25 0.00 3.16
2199 2279 6.124340 TCAATATGCATCATCTGTTGGAGTT 58.876 36.000 0.19 0.00 0.00 3.01
2200 2280 5.687780 TCAATATGCATCATCTGTTGGAGT 58.312 37.500 0.19 0.00 0.00 3.85
2201 2281 6.262496 ACTTCAATATGCATCATCTGTTGGAG 59.738 38.462 0.19 1.15 30.16 3.86
2203 2283 6.387041 ACTTCAATATGCATCATCTGTTGG 57.613 37.500 0.19 0.00 0.00 3.77
2204 2284 7.255569 ACAACTTCAATATGCATCATCTGTTG 58.744 34.615 19.96 19.96 0.00 3.33
2205 2285 7.400599 ACAACTTCAATATGCATCATCTGTT 57.599 32.000 0.19 0.22 0.00 3.16
2206 2286 8.510243 TTACAACTTCAATATGCATCATCTGT 57.490 30.769 0.19 0.19 0.00 3.41
2207 2287 9.791820 TTTTACAACTTCAATATGCATCATCTG 57.208 29.630 0.19 0.00 0.00 2.90
2209 2289 9.793252 AGTTTTACAACTTCAATATGCATCATC 57.207 29.630 0.19 0.00 40.66 2.92
2210 2290 9.577110 CAGTTTTACAACTTCAATATGCATCAT 57.423 29.630 0.19 0.00 40.66 2.45
2221 2631 7.331440 TGTTCGAGTTACAGTTTTACAACTTCA 59.669 33.333 0.00 0.00 40.66 3.02
2226 2636 7.707464 TCATCTGTTCGAGTTACAGTTTTACAA 59.293 33.333 13.87 0.00 42.77 2.41
2227 2637 7.204604 TCATCTGTTCGAGTTACAGTTTTACA 58.795 34.615 13.87 0.00 42.77 2.41
2229 2639 7.148639 GCATCATCTGTTCGAGTTACAGTTTTA 60.149 37.037 13.87 0.00 42.77 1.52
2231 2641 5.120830 GCATCATCTGTTCGAGTTACAGTTT 59.879 40.000 13.87 2.91 42.77 2.66
2232 2642 4.627467 GCATCATCTGTTCGAGTTACAGTT 59.373 41.667 13.87 4.89 42.77 3.16
2233 2643 4.177026 GCATCATCTGTTCGAGTTACAGT 58.823 43.478 13.87 1.63 42.77 3.55
2234 2644 4.176271 TGCATCATCTGTTCGAGTTACAG 58.824 43.478 9.07 9.07 43.41 2.74
2235 2645 4.186856 TGCATCATCTGTTCGAGTTACA 57.813 40.909 0.00 0.00 0.00 2.41
2237 2647 6.403527 CCATTTTGCATCATCTGTTCGAGTTA 60.404 38.462 0.00 0.00 0.00 2.24
2238 2648 5.396484 CATTTTGCATCATCTGTTCGAGTT 58.604 37.500 0.00 0.00 0.00 3.01
2239 2649 4.142534 CCATTTTGCATCATCTGTTCGAGT 60.143 41.667 0.00 0.00 0.00 4.18
2240 2650 4.095334 TCCATTTTGCATCATCTGTTCGAG 59.905 41.667 0.00 0.00 0.00 4.04
2241 2651 4.009002 TCCATTTTGCATCATCTGTTCGA 58.991 39.130 0.00 0.00 0.00 3.71
2243 2653 7.437267 CCTAATTCCATTTTGCATCATCTGTTC 59.563 37.037 0.00 0.00 0.00 3.18
2244 2654 7.093201 ACCTAATTCCATTTTGCATCATCTGTT 60.093 33.333 0.00 0.00 0.00 3.16
2247 2657 6.381994 ACACCTAATTCCATTTTGCATCATCT 59.618 34.615 0.00 0.00 0.00 2.90
2250 2660 5.999205 ACACCTAATTCCATTTTGCATCA 57.001 34.783 0.00 0.00 0.00 3.07
2252 2662 8.998377 GTTTTTACACCTAATTCCATTTTGCAT 58.002 29.630 0.00 0.00 0.00 3.96
2253 2663 8.207545 AGTTTTTACACCTAATTCCATTTTGCA 58.792 29.630 0.00 0.00 0.00 4.08
2254 2664 8.601845 AGTTTTTACACCTAATTCCATTTTGC 57.398 30.769 0.00 0.00 0.00 3.68
2260 2670 6.943718 CCCACTAGTTTTTACACCTAATTCCA 59.056 38.462 0.00 0.00 0.00 3.53
2261 2671 6.127814 GCCCACTAGTTTTTACACCTAATTCC 60.128 42.308 0.00 0.00 0.00 3.01
2265 2675 5.072058 TGAGCCCACTAGTTTTTACACCTAA 59.928 40.000 0.00 0.00 0.00 2.69
2267 2677 3.393278 TGAGCCCACTAGTTTTTACACCT 59.607 43.478 0.00 0.00 0.00 4.00
2269 2679 4.131596 TGTGAGCCCACTAGTTTTTACAC 58.868 43.478 0.00 2.68 43.55 2.90
2270 2680 4.425180 TGTGAGCCCACTAGTTTTTACA 57.575 40.909 0.00 0.00 43.55 2.41
2271 2681 5.001232 TCATGTGAGCCCACTAGTTTTTAC 58.999 41.667 0.00 0.00 43.55 2.01
2272 2682 5.235850 TCATGTGAGCCCACTAGTTTTTA 57.764 39.130 0.00 0.00 43.55 1.52
2274 2684 3.679389 CTCATGTGAGCCCACTAGTTTT 58.321 45.455 0.00 0.00 43.55 2.43
2275 2685 3.340814 CTCATGTGAGCCCACTAGTTT 57.659 47.619 0.00 0.00 43.55 2.66
2287 2697 2.124612 CCATGGCCGCTCATGTGA 60.125 61.111 16.08 0.00 42.02 3.58
2288 2698 2.438975 ACCATGGCCGCTCATGTG 60.439 61.111 13.04 11.70 42.02 3.21
2290 2700 0.747644 TAACACCATGGCCGCTCATG 60.748 55.000 13.04 2.84 42.92 3.07
2368 4063 2.582052 CCACAGGTAGGTTTTGAAGCA 58.418 47.619 0.00 0.00 0.00 3.91
2369 4064 1.269723 GCCACAGGTAGGTTTTGAAGC 59.730 52.381 0.00 0.00 0.00 3.86
2377 4072 2.283529 CCTCGTGCCACAGGTAGGT 61.284 63.158 0.00 0.00 0.00 3.08
2380 4075 1.982395 CCTCCTCGTGCCACAGGTA 60.982 63.158 11.44 1.51 0.00 3.08
2400 4095 2.423577 GGGAGCGAAGTTTTAGCTTCA 58.576 47.619 0.00 0.00 43.61 3.02
2407 4102 1.227853 AGCACGGGAGCGAAGTTTT 60.228 52.632 0.00 0.00 40.15 2.43
2408 4103 1.961277 CAGCACGGGAGCGAAGTTT 60.961 57.895 0.00 0.00 40.15 2.66
2414 4109 2.034879 AATTGTCAGCACGGGAGCG 61.035 57.895 0.00 0.00 40.15 5.03
2415 4110 1.503542 CAATTGTCAGCACGGGAGC 59.496 57.895 0.00 0.00 0.00 4.70
2421 4116 0.240945 CCGAACCCAATTGTCAGCAC 59.759 55.000 4.43 0.00 0.00 4.40
2422 4117 0.109532 TCCGAACCCAATTGTCAGCA 59.890 50.000 4.43 0.00 0.00 4.41
2427 4122 1.882352 GCTCACTCCGAACCCAATTGT 60.882 52.381 4.43 0.00 0.00 2.71
2430 4125 0.250513 GAGCTCACTCCGAACCCAAT 59.749 55.000 9.40 0.00 36.90 3.16
2460 4155 0.884704 CATATTTGGAGACCGCGGGG 60.885 60.000 31.76 18.33 40.11 5.73
2463 4158 1.831389 CGCCATATTTGGAGACCGCG 61.831 60.000 6.35 0.00 46.92 6.46
2464 4159 0.814010 ACGCCATATTTGGAGACCGC 60.814 55.000 12.62 0.00 46.92 5.68
2465 4160 1.663695 AACGCCATATTTGGAGACCG 58.336 50.000 12.62 5.78 46.92 4.79
2467 4162 3.938963 TCTCAAACGCCATATTTGGAGAC 59.061 43.478 12.62 0.00 46.92 3.36
2468 4163 4.191544 CTCTCAAACGCCATATTTGGAGA 58.808 43.478 12.62 1.58 46.92 3.71
2469 4164 3.313526 CCTCTCAAACGCCATATTTGGAG 59.686 47.826 6.35 5.33 46.92 3.86
2470 4165 3.278574 CCTCTCAAACGCCATATTTGGA 58.721 45.455 6.35 0.00 46.92 3.53
2472 4167 3.181497 CCACCTCTCAAACGCCATATTTG 60.181 47.826 0.00 0.00 38.21 2.32
2483 4191 4.890581 GCTCTCTAGTATCCACCTCTCAAA 59.109 45.833 0.00 0.00 0.00 2.69
2486 4194 4.072131 CAGCTCTCTAGTATCCACCTCTC 58.928 52.174 0.00 0.00 0.00 3.20
2489 4197 3.963476 ACAGCTCTCTAGTATCCACCT 57.037 47.619 0.00 0.00 0.00 4.00
2513 4221 2.571212 ACTGATCACGGAGCACAAAAA 58.429 42.857 0.00 0.00 0.00 1.94
2519 4231 4.145052 ACTATCATACTGATCACGGAGCA 58.855 43.478 0.00 0.00 38.26 4.26
2557 4269 9.981114 TGAAATTTCTTTAAACCAAAGGAGATC 57.019 29.630 18.64 0.00 43.37 2.75
2581 4293 9.707957 GAATCCTATCCTCTAGAATTCCTATGA 57.292 37.037 0.65 0.00 0.00 2.15
2582 4294 9.713684 AGAATCCTATCCTCTAGAATTCCTATG 57.286 37.037 0.65 0.00 0.00 2.23
2617 4329 6.098982 TGAACCAAATGGCTCTAAAGGAAAAA 59.901 34.615 0.00 0.00 39.32 1.94
2618 4330 5.600484 TGAACCAAATGGCTCTAAAGGAAAA 59.400 36.000 0.00 0.00 39.32 2.29
2619 4331 5.144100 TGAACCAAATGGCTCTAAAGGAAA 58.856 37.500 0.00 0.00 39.32 3.13
2620 4332 4.735369 TGAACCAAATGGCTCTAAAGGAA 58.265 39.130 0.00 0.00 39.32 3.36
2621 4333 4.380843 TGAACCAAATGGCTCTAAAGGA 57.619 40.909 0.00 0.00 39.32 3.36
2622 4334 6.547141 TCATATGAACCAAATGGCTCTAAAGG 59.453 38.462 1.98 0.00 39.32 3.11
2623 4335 7.572523 TCATATGAACCAAATGGCTCTAAAG 57.427 36.000 1.98 0.00 39.32 1.85
2624 4336 7.953005 TTCATATGAACCAAATGGCTCTAAA 57.047 32.000 14.23 0.00 39.32 1.85
2625 4337 7.014518 CCATTCATATGAACCAAATGGCTCTAA 59.985 37.037 20.19 0.00 39.77 2.10
2626 4338 6.491062 CCATTCATATGAACCAAATGGCTCTA 59.509 38.462 20.19 0.00 39.77 2.43
2627 4339 5.303589 CCATTCATATGAACCAAATGGCTCT 59.696 40.000 20.19 0.00 39.77 4.09
2628 4340 5.302568 TCCATTCATATGAACCAAATGGCTC 59.697 40.000 22.31 0.00 43.87 4.70
2629 4341 5.210430 TCCATTCATATGAACCAAATGGCT 58.790 37.500 22.31 4.00 43.87 4.75
2630 4342 5.534207 TCCATTCATATGAACCAAATGGC 57.466 39.130 22.31 0.00 43.87 4.40
2631 4343 7.959175 AGAATCCATTCATATGAACCAAATGG 58.041 34.615 20.19 21.00 44.99 3.16
2636 4348 9.300681 GGAATAAGAATCCATTCATATGAACCA 57.699 33.333 20.19 7.67 39.23 3.67
2637 4349 9.525826 AGGAATAAGAATCCATTCATATGAACC 57.474 33.333 20.19 11.61 39.55 3.62
2670 4382 4.713792 ATGTGGAGGATAGGAACCAATC 57.286 45.455 0.00 0.00 34.11 2.67
2671 4383 5.044179 TGAAATGTGGAGGATAGGAACCAAT 60.044 40.000 0.00 0.00 34.11 3.16
2672 4384 4.290985 TGAAATGTGGAGGATAGGAACCAA 59.709 41.667 0.00 0.00 34.11 3.67
2673 4385 3.849574 TGAAATGTGGAGGATAGGAACCA 59.150 43.478 0.00 0.00 0.00 3.67
2674 4386 4.503714 TGAAATGTGGAGGATAGGAACC 57.496 45.455 0.00 0.00 0.00 3.62
2675 4387 7.067496 TCTATGAAATGTGGAGGATAGGAAC 57.933 40.000 0.00 0.00 0.00 3.62
2676 4388 7.690454 TTCTATGAAATGTGGAGGATAGGAA 57.310 36.000 0.00 0.00 0.00 3.36
2677 4389 7.690454 TTTCTATGAAATGTGGAGGATAGGA 57.310 36.000 0.00 0.00 0.00 2.94
2678 4390 8.752005 TTTTTCTATGAAATGTGGAGGATAGG 57.248 34.615 0.00 0.00 0.00 2.57
2706 4418 7.823745 TTTTCATTGAGTCTAGGCTCTTTTT 57.176 32.000 24.20 4.72 36.51 1.94
2707 4419 7.823745 TTTTTCATTGAGTCTAGGCTCTTTT 57.176 32.000 24.20 7.12 36.51 2.27
2743 4455 5.830912 TCAACAAGATGTCATTTGGTTGAC 58.169 37.500 18.12 0.00 45.05 3.18
2744 4456 6.272318 GTTCAACAAGATGTCATTTGGTTGA 58.728 36.000 18.12 18.12 0.00 3.18
2745 4457 5.463061 GGTTCAACAAGATGTCATTTGGTTG 59.537 40.000 14.73 14.73 0.00 3.77
2746 4458 5.128499 TGGTTCAACAAGATGTCATTTGGTT 59.872 36.000 10.50 2.56 0.00 3.67
2747 4459 4.648762 TGGTTCAACAAGATGTCATTTGGT 59.351 37.500 10.50 3.75 0.00 3.67
2748 4460 5.199024 TGGTTCAACAAGATGTCATTTGG 57.801 39.130 10.50 0.00 0.00 3.28
2749 4461 7.492020 TCTTTTGGTTCAACAAGATGTCATTTG 59.508 33.333 0.00 0.00 0.00 2.32
2750 4462 7.555087 TCTTTTGGTTCAACAAGATGTCATTT 58.445 30.769 0.00 0.00 0.00 2.32
2751 4463 7.111247 TCTTTTGGTTCAACAAGATGTCATT 57.889 32.000 0.00 0.00 0.00 2.57
2752 4464 6.239120 CCTCTTTTGGTTCAACAAGATGTCAT 60.239 38.462 0.00 0.00 0.00 3.06
2753 4465 5.067674 CCTCTTTTGGTTCAACAAGATGTCA 59.932 40.000 0.00 0.00 0.00 3.58
2754 4466 5.523369 CCTCTTTTGGTTCAACAAGATGTC 58.477 41.667 0.00 0.00 0.00 3.06
2755 4467 4.202151 GCCTCTTTTGGTTCAACAAGATGT 60.202 41.667 0.00 0.00 0.00 3.06
2756 4468 4.301628 GCCTCTTTTGGTTCAACAAGATG 58.698 43.478 0.00 0.00 0.00 2.90
2757 4469 3.321968 GGCCTCTTTTGGTTCAACAAGAT 59.678 43.478 0.00 0.00 0.00 2.40
2758 4470 2.693074 GGCCTCTTTTGGTTCAACAAGA 59.307 45.455 0.00 0.00 0.00 3.02
2759 4471 2.695147 AGGCCTCTTTTGGTTCAACAAG 59.305 45.455 0.00 0.00 0.00 3.16
2760 4472 2.430332 CAGGCCTCTTTTGGTTCAACAA 59.570 45.455 0.00 0.00 0.00 2.83
2761 4473 2.031120 CAGGCCTCTTTTGGTTCAACA 58.969 47.619 0.00 0.00 0.00 3.33
2762 4474 2.294512 CTCAGGCCTCTTTTGGTTCAAC 59.705 50.000 0.00 0.00 0.00 3.18
2763 4475 2.091885 ACTCAGGCCTCTTTTGGTTCAA 60.092 45.455 0.00 0.00 0.00 2.69
2764 4476 1.494721 ACTCAGGCCTCTTTTGGTTCA 59.505 47.619 0.00 0.00 0.00 3.18
2765 4477 1.882623 CACTCAGGCCTCTTTTGGTTC 59.117 52.381 0.00 0.00 0.00 3.62
2766 4478 1.479389 CCACTCAGGCCTCTTTTGGTT 60.479 52.381 0.00 0.00 0.00 3.67
2767 4479 0.111253 CCACTCAGGCCTCTTTTGGT 59.889 55.000 0.00 0.00 0.00 3.67
2768 4480 0.401738 TCCACTCAGGCCTCTTTTGG 59.598 55.000 0.00 7.65 37.29 3.28
2769 4481 2.503895 ATCCACTCAGGCCTCTTTTG 57.496 50.000 0.00 0.00 37.29 2.44
2770 4482 3.782523 TCATATCCACTCAGGCCTCTTTT 59.217 43.478 0.00 0.00 37.29 2.27
2771 4483 3.387962 TCATATCCACTCAGGCCTCTTT 58.612 45.455 0.00 0.00 37.29 2.52
2772 4484 3.051940 TCATATCCACTCAGGCCTCTT 57.948 47.619 0.00 0.00 37.29 2.85
2773 4485 2.783379 TCATATCCACTCAGGCCTCT 57.217 50.000 0.00 0.00 37.29 3.69
2774 4486 4.530161 AGTTATCATATCCACTCAGGCCTC 59.470 45.833 0.00 0.00 37.29 4.70
2775 4487 4.497516 AGTTATCATATCCACTCAGGCCT 58.502 43.478 0.00 0.00 37.29 5.19
2776 4488 4.530161 AGAGTTATCATATCCACTCAGGCC 59.470 45.833 0.00 0.00 38.53 5.19
2777 4489 5.736951 AGAGTTATCATATCCACTCAGGC 57.263 43.478 0.00 0.00 38.53 4.85
2820 4532 2.673523 CCCTGGAGTGGCTTGGAG 59.326 66.667 0.00 0.00 0.00 3.86
2821 4533 3.650950 GCCCTGGAGTGGCTTGGA 61.651 66.667 0.00 0.00 45.70 3.53
2827 4539 3.132029 TTGGTGTGCCCTGGAGTGG 62.132 63.158 0.00 0.00 0.00 4.00
2828 4540 1.898574 GTTGGTGTGCCCTGGAGTG 60.899 63.158 0.00 0.00 0.00 3.51
2829 4541 2.515901 GTTGGTGTGCCCTGGAGT 59.484 61.111 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.