Multiple sequence alignment - TraesCS3A01G102600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G102600 chr3A 100.000 3336 0 0 1 3336 66273970 66270635 0.000000e+00 6161.0
1 TraesCS3A01G102600 chr3A 86.220 1045 84 30 1499 2511 66363075 66364091 0.000000e+00 1077.0
2 TraesCS3A01G102600 chr3A 89.209 695 55 9 2498 3189 66364108 66364785 0.000000e+00 850.0
3 TraesCS3A01G102600 chr3A 86.650 794 52 21 2414 3174 66367710 66368482 0.000000e+00 830.0
4 TraesCS3A01G102600 chr3A 90.486 473 14 10 1 442 32970098 32970570 2.220000e-166 595.0
5 TraesCS3A01G102600 chr3A 89.831 472 11 3 1 442 63732114 63731650 3.730000e-159 571.0
6 TraesCS3A01G102600 chr3A 89.195 472 14 3 1 442 286833656 286833192 3.760000e-154 555.0
7 TraesCS3A01G102600 chr3A 91.156 294 10 5 796 1081 66362361 66362646 5.220000e-103 385.0
8 TraesCS3A01G102600 chr3A 83.415 410 42 20 1124 1515 66362652 66363053 1.140000e-94 357.0
9 TraesCS3A01G102600 chr3A 93.458 107 6 1 693 798 66362174 66362280 1.240000e-34 158.0
10 TraesCS3A01G102600 chr3A 96.000 75 2 1 567 640 66361617 66361691 1.630000e-23 121.0
11 TraesCS3A01G102600 chr3A 81.416 113 21 0 3194 3306 66405013 66405125 3.540000e-15 93.5
12 TraesCS3A01G102600 chr3D 84.113 2203 151 83 693 2770 57334858 57336986 0.000000e+00 1945.0
13 TraesCS3A01G102600 chr3D 85.428 1894 114 60 696 2495 57179641 57177816 0.000000e+00 1820.0
14 TraesCS3A01G102600 chr3D 89.669 755 47 14 1350 2083 57325125 57325869 0.000000e+00 933.0
15 TraesCS3A01G102600 chr3D 89.764 508 29 14 693 1194 57328007 57328497 2.180000e-176 628.0
16 TraesCS3A01G102600 chr3D 88.294 504 34 8 2681 3184 57177561 57177083 6.200000e-162 580.0
17 TraesCS3A01G102600 chr3D 88.993 427 27 5 1221 1640 57328549 57328962 8.260000e-141 510.0
18 TraesCS3A01G102600 chr3D 91.349 289 9 8 675 961 57319936 57320210 6.750000e-102 381.0
19 TraesCS3A01G102600 chr3D 87.500 240 5 14 955 1189 57324770 57324989 1.540000e-63 254.0
20 TraesCS3A01G102600 chr3D 84.436 257 22 10 1725 1972 57330838 57331085 1.550000e-58 237.0
21 TraesCS3A01G102600 chr3D 92.623 122 8 1 520 640 57319676 57319797 1.230000e-39 174.0
22 TraesCS3A01G102600 chr3D 90.909 110 8 1 531 640 57195310 57195203 2.680000e-31 147.0
23 TraesCS3A01G102600 chr3D 86.861 137 9 2 3005 3141 57337190 57337317 9.650000e-31 145.0
24 TraesCS3A01G102600 chr3D 95.238 63 2 1 638 699 57327529 57327591 7.620000e-17 99.0
25 TraesCS3A01G102600 chr3D 96.226 53 2 0 638 690 57319823 57319875 1.650000e-13 87.9
26 TraesCS3A01G102600 chr3B 83.763 2211 169 97 693 2773 90208448 90210598 0.000000e+00 1919.0
27 TraesCS3A01G102600 chr3B 86.166 1612 120 48 832 2387 90159830 90158266 0.000000e+00 1646.0
28 TraesCS3A01G102600 chr3B 85.043 575 48 21 2414 2954 90157661 90157091 4.860000e-153 551.0
29 TraesCS3A01G102600 chr3B 88.771 472 22 7 1 442 816786450 816786920 1.750000e-152 549.0
30 TraesCS3A01G102600 chr3B 87.042 355 15 3 1 325 737756498 737756145 4.060000e-99 372.0
31 TraesCS3A01G102600 chr3B 92.040 201 9 3 2987 3187 90156899 90157092 3.280000e-70 276.0
32 TraesCS3A01G102600 chr3B 94.488 127 7 0 3194 3320 90150743 90150617 2.630000e-46 196.0
33 TraesCS3A01G102600 chr3B 84.021 194 15 10 452 640 90160925 90160743 4.420000e-39 172.0
34 TraesCS3A01G102600 chr3B 92.562 121 7 1 520 640 90207826 90207944 4.420000e-39 172.0
35 TraesCS3A01G102600 chr3B 83.420 193 19 4 3005 3196 90210860 90211040 2.060000e-37 167.0
36 TraesCS3A01G102600 chr3B 95.238 63 2 1 638 699 90207970 90208032 7.620000e-17 99.0
37 TraesCS3A01G102600 chr3B 100.000 37 0 0 2384 2420 90157711 90157675 5.970000e-08 69.4
38 TraesCS3A01G102600 chr2A 90.928 474 11 4 1 443 681242755 681243227 2.850000e-170 608.0
39 TraesCS3A01G102600 chr2A 88.347 472 18 4 1 442 258804471 258804935 1.760000e-147 532.0
40 TraesCS3A01G102600 chr7A 90.698 473 12 4 1 442 474522189 474522660 4.760000e-168 601.0
41 TraesCS3A01G102600 chr7A 90.295 474 14 10 1 442 535518494 535518967 2.870000e-165 592.0
42 TraesCS3A01G102600 chr7A 88.771 472 16 6 1 442 224178675 224178211 8.140000e-151 544.0
43 TraesCS3A01G102600 chr6A 90.678 472 14 2 1 442 89293796 89294267 4.760000e-168 601.0
44 TraesCS3A01G102600 chr6A 90.546 476 12 10 1 444 132611154 132611628 1.710000e-167 599.0
45 TraesCS3A01G102600 chr5B 89.189 481 14 11 1 451 483955567 483956039 1.740000e-157 566.0
46 TraesCS3A01G102600 chr1B 88.559 472 23 3 1 442 5691689 5692159 8.140000e-151 544.0
47 TraesCS3A01G102600 chr1B 92.256 297 13 4 156 442 670436822 670437118 2.390000e-111 412.0
48 TraesCS3A01G102600 chr6D 92.683 287 11 1 167 443 245268612 245268898 4.010000e-109 405.0
49 TraesCS3A01G102600 chr1A 90.210 286 18 1 167 442 455941772 455941487 6.800000e-97 364.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G102600 chr3A 66270635 66273970 3335 True 6161.000000 6161 100.000000 1 3336 1 chr3A.!!$R2 3335
1 TraesCS3A01G102600 chr3A 66361617 66368482 6865 False 539.714286 1077 89.444000 567 3189 7 chr3A.!!$F3 2622
2 TraesCS3A01G102600 chr3D 57177083 57179641 2558 True 1200.000000 1820 86.861000 696 3184 2 chr3D.!!$R2 2488
3 TraesCS3A01G102600 chr3D 57324770 57337317 12547 False 593.875000 1945 88.321750 638 3141 8 chr3D.!!$F2 2503
4 TraesCS3A01G102600 chr3D 57319676 57320210 534 False 214.300000 381 93.399333 520 961 3 chr3D.!!$F1 441
5 TraesCS3A01G102600 chr3B 90157091 90160925 3834 True 609.600000 1646 88.807500 452 2954 4 chr3B.!!$R3 2502
6 TraesCS3A01G102600 chr3B 90207826 90211040 3214 False 589.250000 1919 88.745750 520 3196 4 chr3B.!!$F3 2676

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.107752 TGAATGCATGCGCTCAGGTA 60.108 50.000 14.09 0.0 39.64 3.08 F
458 459 0.540454 CTCCTCCGTTTAAGGGTCCC 59.460 60.000 0.00 0.0 34.46 4.46 F
1034 4053 1.142748 GGCGGTCATCTCTCACAGG 59.857 63.158 0.00 0.0 0.00 4.00 F
2035 12019 1.153939 GTCTGTCAGCTGCGACGAT 60.154 57.895 9.47 0.0 38.84 3.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2130 12114 0.801251 GCAGAGTGTGAAGACATGCC 59.199 55.0 0.0 0.0 33.63 4.40 R
2181 12165 0.036952 ATTCAGTCCAGCACGACCTG 60.037 55.0 0.0 0.0 32.91 4.00 R
2223 12213 0.403271 AGCAACCTTGGACAGAGCAT 59.597 50.0 0.0 0.0 0.00 3.79 R
3100 17618 0.039708 GTTTCAGGCTTGCTGTGCTC 60.040 55.0 0.0 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.120232 CGTAGGTGATCATCGAAGCAC 58.880 52.381 0.00 0.00 0.00 4.40
32 33 2.479560 CGTAGGTGATCATCGAAGCACA 60.480 50.000 7.70 0.00 33.09 4.57
33 34 2.015736 AGGTGATCATCGAAGCACAC 57.984 50.000 7.70 7.84 33.09 3.82
34 35 1.276138 AGGTGATCATCGAAGCACACA 59.724 47.619 7.70 0.00 33.09 3.72
35 36 1.394917 GGTGATCATCGAAGCACACAC 59.605 52.381 7.70 5.37 33.09 3.82
36 37 2.068519 GTGATCATCGAAGCACACACA 58.931 47.619 0.00 0.00 0.00 3.72
40 41 3.607422 TCATCGAAGCACACACAAAAG 57.393 42.857 0.00 0.00 0.00 2.27
41 42 2.942376 TCATCGAAGCACACACAAAAGT 59.058 40.909 0.00 0.00 0.00 2.66
42 43 2.823196 TCGAAGCACACACAAAAGTG 57.177 45.000 0.00 0.00 44.93 3.16
89 90 9.973450 TTAAGAATGCATTTTAGTGTTAAAGCA 57.027 25.926 14.33 0.00 35.63 3.91
92 93 7.382218 AGAATGCATTTTAGTGTTAAAGCACAC 59.618 33.333 14.33 0.00 46.48 3.82
102 103 6.799786 GTGTTAAAGCACACGTACAAAAAT 57.200 33.333 0.00 0.00 37.90 1.82
103 104 7.895582 GTGTTAAAGCACACGTACAAAAATA 57.104 32.000 0.00 0.00 37.90 1.40
104 105 7.757446 GTGTTAAAGCACACGTACAAAAATAC 58.243 34.615 0.00 0.00 37.90 1.89
116 117 5.553722 CGTACAAAAATACGTCAAACAGTCG 59.446 40.000 0.00 0.00 42.37 4.18
117 118 4.276460 ACAAAAATACGTCAAACAGTCGC 58.724 39.130 0.00 0.00 31.85 5.19
119 120 3.515071 AAATACGTCAAACAGTCGCAC 57.485 42.857 0.00 0.00 31.85 5.34
120 121 2.433868 ATACGTCAAACAGTCGCACT 57.566 45.000 0.00 0.00 31.85 4.40
121 122 1.762419 TACGTCAAACAGTCGCACTC 58.238 50.000 0.00 0.00 31.85 3.51
123 124 0.229753 CGTCAAACAGTCGCACTCAC 59.770 55.000 0.00 0.00 0.00 3.51
124 125 1.286501 GTCAAACAGTCGCACTCACA 58.713 50.000 0.00 0.00 0.00 3.58
127 128 2.095213 TCAAACAGTCGCACTCACAAAC 59.905 45.455 0.00 0.00 0.00 2.93
128 129 1.014352 AACAGTCGCACTCACAAACC 58.986 50.000 0.00 0.00 0.00 3.27
129 130 0.107897 ACAGTCGCACTCACAAACCA 60.108 50.000 0.00 0.00 0.00 3.67
130 131 1.229428 CAGTCGCACTCACAAACCAT 58.771 50.000 0.00 0.00 0.00 3.55
132 133 2.157668 CAGTCGCACTCACAAACCATAC 59.842 50.000 0.00 0.00 0.00 2.39
133 134 1.463444 GTCGCACTCACAAACCATACC 59.537 52.381 0.00 0.00 0.00 2.73
134 135 0.442310 CGCACTCACAAACCATACCG 59.558 55.000 0.00 0.00 0.00 4.02
135 136 0.168128 GCACTCACAAACCATACCGC 59.832 55.000 0.00 0.00 0.00 5.68
136 137 1.518325 CACTCACAAACCATACCGCA 58.482 50.000 0.00 0.00 0.00 5.69
140 141 2.746904 CTCACAAACCATACCGCATGAA 59.253 45.455 0.00 0.00 36.69 2.57
142 143 3.057876 TCACAAACCATACCGCATGAAAC 60.058 43.478 0.00 0.00 36.69 2.78
143 144 3.057596 CACAAACCATACCGCATGAAACT 60.058 43.478 0.00 0.00 36.69 2.66
145 146 4.394920 ACAAACCATACCGCATGAAACTAG 59.605 41.667 0.00 0.00 36.69 2.57
146 147 4.481368 AACCATACCGCATGAAACTAGA 57.519 40.909 0.00 0.00 36.69 2.43
149 150 2.973694 TACCGCATGAAACTAGACCC 57.026 50.000 0.00 0.00 0.00 4.46
150 151 0.981183 ACCGCATGAAACTAGACCCA 59.019 50.000 0.00 0.00 0.00 4.51
152 153 1.338674 CCGCATGAAACTAGACCCACA 60.339 52.381 0.00 0.00 0.00 4.17
153 154 2.002586 CGCATGAAACTAGACCCACAG 58.997 52.381 0.00 0.00 0.00 3.66
154 155 1.740025 GCATGAAACTAGACCCACAGC 59.260 52.381 0.00 0.00 0.00 4.40
155 156 2.616510 GCATGAAACTAGACCCACAGCT 60.617 50.000 0.00 0.00 0.00 4.24
156 157 2.839486 TGAAACTAGACCCACAGCTG 57.161 50.000 13.48 13.48 0.00 4.24
160 161 3.340814 AACTAGACCCACAGCTGAATG 57.659 47.619 23.35 9.25 0.00 2.67
161 162 1.065854 ACTAGACCCACAGCTGAATGC 60.066 52.381 23.35 5.50 43.29 3.56
162 163 0.983467 TAGACCCACAGCTGAATGCA 59.017 50.000 23.35 0.00 45.94 3.96
165 166 1.141019 CCCACAGCTGAATGCATGC 59.859 57.895 23.35 11.82 45.94 4.06
167 168 1.872234 CACAGCTGAATGCATGCGC 60.872 57.895 23.35 9.88 45.94 6.09
168 169 2.044555 ACAGCTGAATGCATGCGCT 61.045 52.632 23.35 15.56 45.94 5.92
170 171 1.747745 AGCTGAATGCATGCGCTCA 60.748 52.632 14.09 16.24 45.94 4.26
171 172 1.298413 GCTGAATGCATGCGCTCAG 60.298 57.895 30.50 30.50 41.24 3.35
172 173 1.355563 CTGAATGCATGCGCTCAGG 59.644 57.895 28.60 16.69 36.99 3.86
173 174 1.374343 CTGAATGCATGCGCTCAGGT 61.374 55.000 28.60 6.19 36.99 4.00
174 175 0.107752 TGAATGCATGCGCTCAGGTA 60.108 50.000 14.09 0.00 39.64 3.08
175 176 1.233019 GAATGCATGCGCTCAGGTAT 58.767 50.000 14.09 0.00 39.64 2.73
176 177 2.224257 TGAATGCATGCGCTCAGGTATA 60.224 45.455 14.09 0.00 39.64 1.47
177 178 1.800805 ATGCATGCGCTCAGGTATAC 58.199 50.000 14.09 0.00 39.64 1.47
179 180 1.143305 GCATGCGCTCAGGTATACAG 58.857 55.000 9.73 0.00 34.30 2.74
180 181 1.269778 GCATGCGCTCAGGTATACAGA 60.270 52.381 9.73 1.27 34.30 3.41
181 182 2.803133 GCATGCGCTCAGGTATACAGAA 60.803 50.000 9.73 0.00 34.30 3.02
182 183 3.657634 CATGCGCTCAGGTATACAGAAT 58.342 45.455 9.73 0.00 0.00 2.40
183 184 4.809673 CATGCGCTCAGGTATACAGAATA 58.190 43.478 9.73 0.00 0.00 1.75
184 185 4.238761 TGCGCTCAGGTATACAGAATAC 57.761 45.455 9.73 0.00 39.92 1.89
185 186 3.634910 TGCGCTCAGGTATACAGAATACA 59.365 43.478 9.73 0.00 42.06 2.29
186 187 3.982058 GCGCTCAGGTATACAGAATACAC 59.018 47.826 0.00 0.00 42.06 2.90
187 188 4.499188 GCGCTCAGGTATACAGAATACACA 60.499 45.833 0.00 0.00 42.06 3.72
188 189 5.773575 CGCTCAGGTATACAGAATACACAT 58.226 41.667 5.01 0.00 42.06 3.21
189 190 5.631096 CGCTCAGGTATACAGAATACACATG 59.369 44.000 5.01 0.00 42.06 3.21
191 192 6.478512 TCAGGTATACAGAATACACATGCA 57.521 37.500 5.01 0.00 42.06 3.96
194 195 6.369890 CAGGTATACAGAATACACATGCATCC 59.630 42.308 5.01 0.00 42.06 3.51
197 198 3.966979 ACAGAATACACATGCATCCCAA 58.033 40.909 0.00 0.00 0.00 4.12
198 199 4.343231 ACAGAATACACATGCATCCCAAA 58.657 39.130 0.00 0.00 0.00 3.28
199 200 4.771577 ACAGAATACACATGCATCCCAAAA 59.228 37.500 0.00 0.00 0.00 2.44
200 201 5.245751 ACAGAATACACATGCATCCCAAAAA 59.754 36.000 0.00 0.00 0.00 1.94
217 218 3.790089 AAAAAGACCAACGGAGGAGAT 57.210 42.857 2.13 0.00 0.00 2.75
218 219 4.903045 AAAAAGACCAACGGAGGAGATA 57.097 40.909 2.13 0.00 0.00 1.98
219 220 4.903045 AAAAGACCAACGGAGGAGATAA 57.097 40.909 2.13 0.00 0.00 1.75
221 222 2.816411 AGACCAACGGAGGAGATAACA 58.184 47.619 2.13 0.00 0.00 2.41
222 223 3.375699 AGACCAACGGAGGAGATAACAT 58.624 45.455 2.13 0.00 0.00 2.71
223 224 3.133003 AGACCAACGGAGGAGATAACATG 59.867 47.826 2.13 0.00 0.00 3.21
224 225 2.838202 ACCAACGGAGGAGATAACATGT 59.162 45.455 0.00 0.00 0.00 3.21
226 227 3.871594 CCAACGGAGGAGATAACATGTTC 59.128 47.826 15.85 1.21 0.00 3.18
227 228 4.503910 CAACGGAGGAGATAACATGTTCA 58.496 43.478 15.85 2.27 0.00 3.18
228 229 4.392921 ACGGAGGAGATAACATGTTCAG 57.607 45.455 15.85 2.12 0.00 3.02
229 230 3.126831 CGGAGGAGATAACATGTTCAGC 58.873 50.000 15.85 5.77 0.00 4.26
230 231 3.181471 CGGAGGAGATAACATGTTCAGCT 60.181 47.826 15.85 10.71 0.00 4.24
231 232 4.125703 GGAGGAGATAACATGTTCAGCTG 58.874 47.826 15.85 7.63 0.00 4.24
233 234 4.511527 AGGAGATAACATGTTCAGCTGTG 58.488 43.478 15.85 7.08 0.00 3.66
234 235 3.064545 GGAGATAACATGTTCAGCTGTGC 59.935 47.826 15.85 8.41 0.00 4.57
235 236 3.937706 GAGATAACATGTTCAGCTGTGCT 59.062 43.478 15.85 0.00 40.77 4.40
238 239 1.233019 ACATGTTCAGCTGTGCTCAC 58.767 50.000 14.67 4.87 36.40 3.51
239 240 1.202734 ACATGTTCAGCTGTGCTCACT 60.203 47.619 14.67 0.00 36.40 3.41
240 241 1.463831 CATGTTCAGCTGTGCTCACTC 59.536 52.381 14.67 0.00 36.40 3.51
241 242 0.755079 TGTTCAGCTGTGCTCACTCT 59.245 50.000 14.67 0.00 36.40 3.24
242 243 1.269988 TGTTCAGCTGTGCTCACTCTC 60.270 52.381 14.67 0.00 36.40 3.20
243 244 1.043022 TTCAGCTGTGCTCACTCTCA 58.957 50.000 14.67 0.00 36.40 3.27
244 245 1.264295 TCAGCTGTGCTCACTCTCAT 58.736 50.000 14.67 0.00 36.40 2.90
246 247 2.827921 TCAGCTGTGCTCACTCTCATAA 59.172 45.455 14.67 0.00 36.40 1.90
249 250 4.034163 CAGCTGTGCTCACTCTCATAAATG 59.966 45.833 5.25 0.00 36.40 2.32
250 251 4.081254 AGCTGTGCTCACTCTCATAAATGA 60.081 41.667 1.47 0.00 30.62 2.57
251 252 4.633126 GCTGTGCTCACTCTCATAAATGAA 59.367 41.667 1.47 0.00 36.18 2.57
253 254 6.183360 GCTGTGCTCACTCTCATAAATGAATT 60.183 38.462 1.47 0.00 36.18 2.17
254 255 7.627939 GCTGTGCTCACTCTCATAAATGAATTT 60.628 37.037 1.47 0.00 36.18 1.82
256 257 8.239314 TGTGCTCACTCTCATAAATGAATTTTC 58.761 33.333 1.47 0.00 36.18 2.29
257 258 7.699812 GTGCTCACTCTCATAAATGAATTTTCC 59.300 37.037 0.00 0.00 36.18 3.13
258 259 7.148018 TGCTCACTCTCATAAATGAATTTTCCC 60.148 37.037 0.00 0.00 36.18 3.97
260 261 9.618890 CTCACTCTCATAAATGAATTTTCCCTA 57.381 33.333 0.00 0.00 36.18 3.53
261 262 9.973661 TCACTCTCATAAATGAATTTTCCCTAA 57.026 29.630 0.00 0.00 36.18 2.69
270 271 8.608185 AAATGAATTTTCCCTAATTAGGCTCA 57.392 30.769 24.05 17.25 42.26 4.26
271 272 8.608185 AATGAATTTTCCCTAATTAGGCTCAA 57.392 30.769 24.05 15.55 42.26 3.02
272 273 8.788238 ATGAATTTTCCCTAATTAGGCTCAAT 57.212 30.769 24.05 16.87 42.26 2.57
273 274 8.010733 TGAATTTTCCCTAATTAGGCTCAATG 57.989 34.615 24.05 10.78 42.26 2.82
274 275 5.852282 TTTTCCCTAATTAGGCTCAATGC 57.148 39.130 24.05 0.00 42.26 3.56
275 276 4.796110 TTCCCTAATTAGGCTCAATGCT 57.204 40.909 24.05 0.00 42.26 3.79
276 277 5.904984 TTCCCTAATTAGGCTCAATGCTA 57.095 39.130 24.05 1.11 42.26 3.49
278 279 4.658435 TCCCTAATTAGGCTCAATGCTACA 59.342 41.667 24.05 0.00 42.26 2.74
279 280 5.310594 TCCCTAATTAGGCTCAATGCTACAT 59.689 40.000 24.05 0.00 42.26 2.29
280 281 6.500400 TCCCTAATTAGGCTCAATGCTACATA 59.500 38.462 24.05 0.00 42.26 2.29
281 282 7.182749 TCCCTAATTAGGCTCAATGCTACATAT 59.817 37.037 24.05 0.00 42.26 1.78
283 284 9.236006 CCTAATTAGGCTCAATGCTACATATTT 57.764 33.333 18.52 0.00 42.39 1.40
285 286 8.930846 AATTAGGCTCAATGCTACATATTTCT 57.069 30.769 0.00 0.00 42.39 2.52
286 287 7.734924 TTAGGCTCAATGCTACATATTTCTG 57.265 36.000 0.00 0.00 42.39 3.02
289 290 5.997746 GGCTCAATGCTACATATTTCTGGTA 59.002 40.000 0.00 0.00 42.39 3.25
291 292 6.483307 GCTCAATGCTACATATTTCTGGTACA 59.517 38.462 0.00 0.00 38.95 2.90
303 304 3.448469 TGGTACAGGGGCAAAAAGG 57.552 52.632 0.00 0.00 0.00 3.11
304 305 0.558712 TGGTACAGGGGCAAAAAGGT 59.441 50.000 0.00 0.00 0.00 3.50
306 307 1.203013 GGTACAGGGGCAAAAAGGTCT 60.203 52.381 0.00 0.00 0.00 3.85
307 308 2.594131 GTACAGGGGCAAAAAGGTCTT 58.406 47.619 0.00 0.00 0.00 3.01
308 309 1.704641 ACAGGGGCAAAAAGGTCTTC 58.295 50.000 0.00 0.00 0.00 2.87
309 310 1.217942 ACAGGGGCAAAAAGGTCTTCT 59.782 47.619 0.00 0.00 0.00 2.85
310 311 1.889170 CAGGGGCAAAAAGGTCTTCTC 59.111 52.381 0.00 0.00 0.00 2.87
312 313 1.613925 GGGGCAAAAAGGTCTTCTCAC 59.386 52.381 0.00 0.00 0.00 3.51
314 315 1.947456 GGCAAAAAGGTCTTCTCACGT 59.053 47.619 0.00 0.00 0.00 4.49
315 316 2.287009 GGCAAAAAGGTCTTCTCACGTG 60.287 50.000 9.94 9.94 0.00 4.49
317 318 3.558418 GCAAAAAGGTCTTCTCACGTGTA 59.442 43.478 16.51 2.02 0.00 2.90
318 319 4.552184 GCAAAAAGGTCTTCTCACGTGTAC 60.552 45.833 16.51 7.24 0.00 2.90
319 320 4.395959 AAAAGGTCTTCTCACGTGTACA 57.604 40.909 16.51 0.00 0.00 2.90
320 321 4.395959 AAAGGTCTTCTCACGTGTACAA 57.604 40.909 16.51 5.97 0.00 2.41
321 322 4.395959 AAGGTCTTCTCACGTGTACAAA 57.604 40.909 16.51 5.12 0.00 2.83
322 323 4.395959 AGGTCTTCTCACGTGTACAAAA 57.604 40.909 16.51 3.41 0.00 2.44
323 324 4.957296 AGGTCTTCTCACGTGTACAAAAT 58.043 39.130 16.51 0.00 0.00 1.82
324 325 4.750098 AGGTCTTCTCACGTGTACAAAATG 59.250 41.667 16.51 0.00 0.00 2.32
325 326 4.748102 GGTCTTCTCACGTGTACAAAATGA 59.252 41.667 16.51 0.79 0.00 2.57
326 327 5.235616 GGTCTTCTCACGTGTACAAAATGAA 59.764 40.000 16.51 7.42 0.00 2.57
328 329 6.018994 GTCTTCTCACGTGTACAAAATGAACT 60.019 38.462 16.51 0.00 0.00 3.01
329 330 7.168637 GTCTTCTCACGTGTACAAAATGAACTA 59.831 37.037 16.51 0.00 0.00 2.24
330 331 7.381408 TCTTCTCACGTGTACAAAATGAACTAG 59.619 37.037 16.51 0.00 0.00 2.57
331 332 6.741109 TCTCACGTGTACAAAATGAACTAGA 58.259 36.000 16.51 2.53 0.00 2.43
333 334 6.509656 TCACGTGTACAAAATGAACTAGAGT 58.490 36.000 16.51 0.00 0.00 3.24
334 335 6.419710 TCACGTGTACAAAATGAACTAGAGTG 59.580 38.462 16.51 0.00 0.00 3.51
335 336 6.200286 CACGTGTACAAAATGAACTAGAGTGT 59.800 38.462 7.58 0.00 0.00 3.55
337 338 6.419710 CGTGTACAAAATGAACTAGAGTGTCA 59.580 38.462 0.00 0.00 0.00 3.58
339 340 9.419297 GTGTACAAAATGAACTAGAGTGTCATA 57.581 33.333 0.00 0.00 0.00 2.15
343 344 9.823647 ACAAAATGAACTAGAGTGTCATATAGG 57.176 33.333 0.00 0.00 0.00 2.57
344 345 9.265901 CAAAATGAACTAGAGTGTCATATAGGG 57.734 37.037 0.00 0.00 0.00 3.53
345 346 8.783660 AAATGAACTAGAGTGTCATATAGGGA 57.216 34.615 0.00 0.00 0.00 4.20
346 347 8.783660 AATGAACTAGAGTGTCATATAGGGAA 57.216 34.615 0.00 0.00 0.00 3.97
348 349 8.239038 TGAACTAGAGTGTCATATAGGGAAAG 57.761 38.462 0.00 0.00 0.00 2.62
350 351 8.840200 AACTAGAGTGTCATATAGGGAAAGAA 57.160 34.615 0.00 0.00 0.00 2.52
351 352 8.840200 ACTAGAGTGTCATATAGGGAAAGAAA 57.160 34.615 0.00 0.00 0.00 2.52
352 353 9.440761 ACTAGAGTGTCATATAGGGAAAGAAAT 57.559 33.333 0.00 0.00 0.00 2.17
367 368 9.280456 AGGGAAAGAAATTAAGACTATAGGTCA 57.720 33.333 4.43 0.00 46.72 4.02
419 420 9.540538 TCAAATAAGGAACATGATTTTAAGGGA 57.459 29.630 0.00 0.00 0.00 4.20
420 421 9.807649 CAAATAAGGAACATGATTTTAAGGGAG 57.192 33.333 0.00 0.00 0.00 4.30
423 424 5.892348 AGGAACATGATTTTAAGGGAGTGT 58.108 37.500 0.00 0.00 0.00 3.55
424 425 5.946377 AGGAACATGATTTTAAGGGAGTGTC 59.054 40.000 0.00 0.00 0.00 3.67
425 426 5.710099 GGAACATGATTTTAAGGGAGTGTCA 59.290 40.000 0.00 0.00 0.00 3.58
426 427 6.208599 GGAACATGATTTTAAGGGAGTGTCAA 59.791 38.462 0.00 0.00 0.00 3.18
427 428 7.255801 GGAACATGATTTTAAGGGAGTGTCAAA 60.256 37.037 0.00 0.00 0.00 2.69
428 429 7.781324 ACATGATTTTAAGGGAGTGTCAAAT 57.219 32.000 0.00 0.00 0.00 2.32
429 430 8.877864 ACATGATTTTAAGGGAGTGTCAAATA 57.122 30.769 0.00 0.00 0.00 1.40
431 432 9.793252 CATGATTTTAAGGGAGTGTCAAATAAG 57.207 33.333 0.00 0.00 0.00 1.73
432 433 8.348285 TGATTTTAAGGGAGTGTCAAATAAGG 57.652 34.615 0.00 0.00 0.00 2.69
433 434 8.167392 TGATTTTAAGGGAGTGTCAAATAAGGA 58.833 33.333 0.00 0.00 0.00 3.36
434 435 8.950007 ATTTTAAGGGAGTGTCAAATAAGGAA 57.050 30.769 0.00 0.00 0.00 3.36
435 436 8.950007 TTTTAAGGGAGTGTCAAATAAGGAAT 57.050 30.769 0.00 0.00 0.00 3.01
436 437 8.950007 TTTAAGGGAGTGTCAAATAAGGAATT 57.050 30.769 0.00 0.00 0.00 2.17
437 438 8.575649 TTAAGGGAGTGTCAAATAAGGAATTC 57.424 34.615 0.00 0.00 0.00 2.17
438 439 6.394345 AGGGAGTGTCAAATAAGGAATTCT 57.606 37.500 5.23 0.00 0.00 2.40
440 441 6.216456 AGGGAGTGTCAAATAAGGAATTCTCT 59.784 38.462 5.23 0.00 0.00 3.10
441 442 6.540551 GGGAGTGTCAAATAAGGAATTCTCTC 59.459 42.308 5.23 0.00 0.00 3.20
442 443 6.540551 GGAGTGTCAAATAAGGAATTCTCTCC 59.459 42.308 5.23 0.00 35.51 3.71
445 446 6.540551 GTGTCAAATAAGGAATTCTCTCCTCC 59.459 42.308 5.23 0.00 45.59 4.30
446 447 5.755861 GTCAAATAAGGAATTCTCTCCTCCG 59.244 44.000 5.23 0.00 45.59 4.63
447 448 5.425539 TCAAATAAGGAATTCTCTCCTCCGT 59.574 40.000 5.23 0.00 45.59 4.69
448 449 5.959583 AATAAGGAATTCTCTCCTCCGTT 57.040 39.130 5.23 0.00 45.59 4.44
449 450 5.959583 ATAAGGAATTCTCTCCTCCGTTT 57.040 39.130 5.23 0.00 45.59 3.60
450 451 7.433537 AATAAGGAATTCTCTCCTCCGTTTA 57.566 36.000 5.23 0.00 45.59 2.01
458 459 0.540454 CTCCTCCGTTTAAGGGTCCC 59.460 60.000 0.00 0.00 34.46 4.46
473 474 3.657727 AGGGTCCCTCTCTTTGAAATCAA 59.342 43.478 3.85 0.00 0.00 2.57
474 475 4.013050 GGGTCCCTCTCTTTGAAATCAAG 58.987 47.826 0.00 0.00 37.15 3.02
476 477 4.263506 GGTCCCTCTCTTTGAAATCAAGGA 60.264 45.833 7.60 7.60 39.23 3.36
477 478 5.504853 GTCCCTCTCTTTGAAATCAAGGAT 58.495 41.667 8.21 0.00 40.43 3.24
478 479 5.356470 GTCCCTCTCTTTGAAATCAAGGATG 59.644 44.000 8.21 5.36 40.43 3.51
479 480 5.014544 TCCCTCTCTTTGAAATCAAGGATGT 59.985 40.000 8.21 0.00 40.43 3.06
481 482 5.942236 CCTCTCTTTGAAATCAAGGATGTCA 59.058 40.000 8.21 0.00 40.43 3.58
482 483 6.432162 CCTCTCTTTGAAATCAAGGATGTCAA 59.568 38.462 8.21 7.56 42.43 3.18
483 484 7.122353 CCTCTCTTTGAAATCAAGGATGTCAAT 59.878 37.037 11.49 0.00 43.24 2.57
484 485 8.048534 TCTCTTTGAAATCAAGGATGTCAATC 57.951 34.615 11.49 0.00 43.24 2.67
485 486 7.666804 TCTCTTTGAAATCAAGGATGTCAATCA 59.333 33.333 11.49 2.83 43.24 2.57
489 490 6.916440 TGAAATCAAGGATGTCAATCAACAG 58.084 36.000 0.00 0.00 33.84 3.16
492 493 8.585471 AAATCAAGGATGTCAATCAACAGTAT 57.415 30.769 0.00 0.00 34.17 2.12
575 580 5.276270 GCGAGTTCTGACACGGTTATTATA 58.724 41.667 0.00 0.00 39.73 0.98
576 581 5.919141 GCGAGTTCTGACACGGTTATTATAT 59.081 40.000 0.00 0.00 39.73 0.86
600 605 3.616219 TGTTAAGCAAACAGAGTGGTGT 58.384 40.909 0.88 0.00 43.22 4.16
623 628 3.310246 GCCTCTAGCGACTTATTAGCAC 58.690 50.000 0.00 0.00 0.00 4.40
624 629 3.004944 GCCTCTAGCGACTTATTAGCACT 59.995 47.826 0.00 0.00 0.00 4.40
625 630 4.541779 CCTCTAGCGACTTATTAGCACTG 58.458 47.826 0.00 0.00 0.00 3.66
626 631 3.966154 TCTAGCGACTTATTAGCACTGC 58.034 45.455 0.00 0.00 0.00 4.40
627 632 2.969628 AGCGACTTATTAGCACTGCT 57.030 45.000 8.95 8.95 43.41 4.24
628 633 2.815478 AGCGACTTATTAGCACTGCTC 58.185 47.619 6.86 0.00 40.44 4.26
629 634 2.428890 AGCGACTTATTAGCACTGCTCT 59.571 45.455 6.86 0.00 40.44 4.09
630 635 2.792116 GCGACTTATTAGCACTGCTCTC 59.208 50.000 6.86 0.00 40.44 3.20
631 636 3.376540 CGACTTATTAGCACTGCTCTCC 58.623 50.000 6.86 0.00 40.44 3.71
632 637 3.181486 CGACTTATTAGCACTGCTCTCCA 60.181 47.826 6.86 0.00 40.44 3.86
866 3867 4.858850 TGGCATGATTCTTTCCACATACT 58.141 39.130 0.00 0.00 0.00 2.12
868 3869 5.125900 TGGCATGATTCTTTCCACATACTTG 59.874 40.000 0.00 0.00 0.00 3.16
869 3870 5.126061 GGCATGATTCTTTCCACATACTTGT 59.874 40.000 0.00 0.00 36.15 3.16
940 3942 2.023673 GAATCCATGCCAATCCGACAA 58.976 47.619 0.00 0.00 0.00 3.18
1034 4053 1.142748 GGCGGTCATCTCTCACAGG 59.857 63.158 0.00 0.00 0.00 4.00
1095 4123 8.911918 ATCCATCCTACTCTATATATGACGAC 57.088 38.462 0.00 0.00 0.00 4.34
1189 4217 2.619074 CCCGCTTCCATTTCTTCTCCTT 60.619 50.000 0.00 0.00 0.00 3.36
1194 4225 5.006386 GCTTCCATTTCTTCTCCTTCTTCA 58.994 41.667 0.00 0.00 0.00 3.02
1195 4226 5.106357 GCTTCCATTTCTTCTCCTTCTTCAC 60.106 44.000 0.00 0.00 0.00 3.18
1203 4274 2.251818 TCTCCTTCTTCACTGTCCAGG 58.748 52.381 0.00 0.00 0.00 4.45
1204 4275 2.158310 TCTCCTTCTTCACTGTCCAGGA 60.158 50.000 0.00 0.00 0.00 3.86
1212 4283 2.540383 TCACTGTCCAGGAGCTGTAAT 58.460 47.619 0.00 0.00 0.00 1.89
1525 11469 4.102649 GGTTTGCGCCAACAATATCTTAC 58.897 43.478 23.82 1.73 0.00 2.34
1622 11572 7.413877 GCTCATCATCTTTTCTGGTAGAAACTG 60.414 40.741 3.65 3.43 43.25 3.16
1642 11598 5.990408 ACTGACTTTGCATTAAGAAGTTCG 58.010 37.500 5.15 1.76 34.02 3.95
1667 11623 8.606727 GAACAATTCTGATCGACCTTTATTTG 57.393 34.615 0.00 0.00 0.00 2.32
1668 11624 7.687941 ACAATTCTGATCGACCTTTATTTGT 57.312 32.000 0.00 0.00 0.00 2.83
1680 11640 5.072741 ACCTTTATTTGTGTCAGCATCAGT 58.927 37.500 0.00 0.00 0.00 3.41
1683 11643 6.294120 CCTTTATTTGTGTCAGCATCAGTCAA 60.294 38.462 0.00 0.00 0.00 3.18
1686 11646 3.473923 TGTGTCAGCATCAGTCAAGAA 57.526 42.857 0.00 0.00 0.00 2.52
1693 11656 6.369890 TGTCAGCATCAGTCAAGAACTTTATC 59.630 38.462 0.00 0.00 35.45 1.75
1712 11675 8.621286 ACTTTATCAAGAACATTGAAAACTCGT 58.379 29.630 0.00 0.00 33.72 4.18
1736 11699 6.889301 ACAAGTGTTCACATTTCATCAGAT 57.111 33.333 5.74 0.00 0.00 2.90
1748 11711 5.726980 TTTCATCAGATTTTTCACCCTGG 57.273 39.130 0.00 0.00 0.00 4.45
1753 11716 6.497954 TCATCAGATTTTTCACCCTGGAATTT 59.502 34.615 0.00 0.00 0.00 1.82
1754 11717 6.100404 TCAGATTTTTCACCCTGGAATTTG 57.900 37.500 0.00 0.00 0.00 2.32
1755 11718 5.602145 TCAGATTTTTCACCCTGGAATTTGT 59.398 36.000 0.00 0.00 0.00 2.83
1756 11719 6.780031 TCAGATTTTTCACCCTGGAATTTGTA 59.220 34.615 0.00 0.00 0.00 2.41
1757 11720 7.039784 TCAGATTTTTCACCCTGGAATTTGTAG 60.040 37.037 0.00 0.00 0.00 2.74
1758 11721 7.010160 AGATTTTTCACCCTGGAATTTGTAGA 58.990 34.615 0.00 0.00 0.00 2.59
1759 11722 6.648879 TTTTTCACCCTGGAATTTGTAGAG 57.351 37.500 0.00 0.00 0.00 2.43
1818 11802 6.258727 TGTGACTTGTCAGAAAAATGTCTCTC 59.741 38.462 3.45 0.00 0.00 3.20
1923 11907 2.646719 CGCACAGGCACAGCAAAT 59.353 55.556 0.00 0.00 41.24 2.32
2035 12019 1.153939 GTCTGTCAGCTGCGACGAT 60.154 57.895 9.47 0.00 38.84 3.73
2084 12068 3.790437 CGCTCCATGGCCTGAGGT 61.790 66.667 6.96 0.00 0.00 3.85
2130 12114 2.584608 CCTAGGTGGAAGGGTGCG 59.415 66.667 0.00 0.00 38.35 5.34
2178 12162 2.749441 GGAGGAAGGCAGTGCAGC 60.749 66.667 18.61 4.97 0.00 5.25
2179 12163 2.033141 GAGGAAGGCAGTGCAGCA 59.967 61.111 18.61 0.00 35.83 4.41
2180 12164 2.033757 AGGAAGGCAGTGCAGCAG 59.966 61.111 18.61 0.00 35.83 4.24
2181 12165 3.745803 GGAAGGCAGTGCAGCAGC 61.746 66.667 18.61 0.00 42.57 5.25
2223 12213 1.834856 CTGAAGGAGGCTGTGAGGCA 61.835 60.000 0.00 0.00 44.19 4.75
2231 12221 1.376942 GCTGTGAGGCATGCTCTGT 60.377 57.895 18.92 0.00 0.00 3.41
2381 12397 3.731652 TTTTGTGCCAGAATTGAGGTG 57.268 42.857 0.00 0.00 0.00 4.00
2382 12398 2.363306 TTGTGCCAGAATTGAGGTGT 57.637 45.000 0.00 0.00 0.00 4.16
2453 13054 1.602377 GGTTTACACTGTGTGCCTGAC 59.398 52.381 22.97 12.81 36.98 3.51
2455 13056 0.462375 TTACACTGTGTGCCTGACGT 59.538 50.000 22.97 0.00 36.98 4.34
2742 17181 3.186119 ACACCATGCAAGTTTTCAAACG 58.814 40.909 0.00 0.00 43.51 3.60
2766 17205 5.741388 AATAGAGCATTTTAGCACCTTCG 57.259 39.130 0.00 0.00 36.85 3.79
2885 17395 7.604164 TGAAATCCTCTTATGTGTGTTCTCTTC 59.396 37.037 0.00 0.00 0.00 2.87
3100 17618 6.849588 AATGCCTAACTTTTGCTTTTGAAG 57.150 33.333 0.00 0.00 0.00 3.02
3142 17660 1.677576 CTCTGTCTGAGAGCAGCTAGG 59.322 57.143 0.00 0.00 45.39 3.02
3150 17668 0.032615 AGAGCAGCTAGGTGCCTAGT 60.033 55.000 36.39 22.30 45.67 2.57
3151 17669 1.215673 AGAGCAGCTAGGTGCCTAGTA 59.784 52.381 36.39 0.00 45.67 1.82
3152 17670 1.611491 GAGCAGCTAGGTGCCTAGTAG 59.389 57.143 36.39 16.60 45.67 2.57
3163 17681 7.393796 GCTAGGTGCCTAGTAGATGTATAAAGA 59.606 40.741 22.12 0.00 45.67 2.52
3192 17710 4.832266 AGTTGGCAATTGGATTAACTCACA 59.168 37.500 1.92 0.00 0.00 3.58
3195 17713 5.782047 TGGCAATTGGATTAACTCACAAAG 58.218 37.500 7.72 0.00 0.00 2.77
3196 17714 5.304101 TGGCAATTGGATTAACTCACAAAGT 59.696 36.000 7.72 0.00 41.10 2.66
3197 17715 6.491745 TGGCAATTGGATTAACTCACAAAGTA 59.508 34.615 7.72 0.00 37.17 2.24
3198 17716 7.029563 GGCAATTGGATTAACTCACAAAGTAG 58.970 38.462 7.72 0.00 37.17 2.57
3199 17717 7.094377 GGCAATTGGATTAACTCACAAAGTAGA 60.094 37.037 7.72 0.00 37.17 2.59
3200 17718 7.750903 GCAATTGGATTAACTCACAAAGTAGAC 59.249 37.037 7.72 0.00 37.17 2.59
3201 17719 7.596749 ATTGGATTAACTCACAAAGTAGACG 57.403 36.000 0.00 0.00 37.17 4.18
3202 17720 5.475719 TGGATTAACTCACAAAGTAGACGG 58.524 41.667 0.00 0.00 37.17 4.79
3203 17721 5.244402 TGGATTAACTCACAAAGTAGACGGA 59.756 40.000 0.00 0.00 37.17 4.69
3204 17722 5.805994 GGATTAACTCACAAAGTAGACGGAG 59.194 44.000 0.00 0.00 37.17 4.63
3205 17723 5.779529 TTAACTCACAAAGTAGACGGAGT 57.220 39.130 0.00 0.00 40.65 3.85
3206 17724 4.667519 AACTCACAAAGTAGACGGAGTT 57.332 40.909 0.00 0.00 38.13 3.01
3207 17725 3.978687 ACTCACAAAGTAGACGGAGTTG 58.021 45.455 0.00 0.00 37.38 3.16
3208 17726 3.799232 ACTCACAAAGTAGACGGAGTTGC 60.799 47.826 0.00 0.00 37.38 4.17
3209 17727 6.006046 ACTCACAAAGTAGACGGAGTTGCT 62.006 45.833 0.00 0.00 37.38 3.91
3210 17728 7.957550 ACTCACAAAGTAGACGGAGTTGCTG 62.958 48.000 0.00 0.00 37.38 4.41
3224 17742 2.511145 GCTGCTCAGCGAAGGGAG 60.511 66.667 6.08 0.00 45.29 4.30
3225 17743 2.186384 CTGCTCAGCGAAGGGAGG 59.814 66.667 0.00 0.00 0.00 4.30
3226 17744 2.604686 TGCTCAGCGAAGGGAGGT 60.605 61.111 0.00 0.00 0.00 3.85
3227 17745 2.185608 GCTCAGCGAAGGGAGGTC 59.814 66.667 0.00 0.00 0.00 3.85
3228 17746 2.896443 CTCAGCGAAGGGAGGTCC 59.104 66.667 0.00 0.00 0.00 4.46
3238 17756 4.779733 GGAGGTCCTGGGCGGAGA 62.780 72.222 0.00 0.00 44.20 3.71
3239 17757 3.462678 GAGGTCCTGGGCGGAGAC 61.463 72.222 0.00 0.00 44.20 3.36
3251 17769 4.083862 GGAGACGGACAGGCACCC 62.084 72.222 0.00 0.00 31.74 4.61
3268 17786 4.436998 CGCCCTCGCCGAGAAACT 62.437 66.667 17.19 0.00 0.00 2.66
3269 17787 2.815647 GCCCTCGCCGAGAAACTG 60.816 66.667 17.19 0.00 0.00 3.16
3270 17788 2.815647 CCCTCGCCGAGAAACTGC 60.816 66.667 17.19 0.00 0.00 4.40
3278 17796 2.807895 GAGAAACTGCGCGCGGTA 60.808 61.111 42.57 18.23 34.70 4.02
3279 17797 2.789203 GAGAAACTGCGCGCGGTAG 61.789 63.158 42.57 28.62 34.70 3.18
3280 17798 4.500568 GAAACTGCGCGCGGTAGC 62.501 66.667 42.57 31.99 40.74 3.58
3299 17817 4.681978 GAGGCTTGTCACGGGCGT 62.682 66.667 0.00 0.00 0.00 5.68
3300 17818 4.988598 AGGCTTGTCACGGGCGTG 62.989 66.667 0.00 0.00 46.64 5.34
3314 17832 3.425713 CGTGAGCGTGCCATTGCT 61.426 61.111 0.00 0.00 45.90 3.91
3315 17833 2.177531 GTGAGCGTGCCATTGCTG 59.822 61.111 0.00 0.00 42.60 4.41
3316 17834 2.281692 TGAGCGTGCCATTGCTGT 60.282 55.556 0.00 0.00 42.60 4.40
3317 17835 2.327343 TGAGCGTGCCATTGCTGTC 61.327 57.895 0.00 0.00 42.60 3.51
3318 17836 3.372676 GAGCGTGCCATTGCTGTCG 62.373 63.158 0.00 0.00 42.60 4.35
3319 17837 3.726517 GCGTGCCATTGCTGTCGT 61.727 61.111 0.00 0.00 38.71 4.34
3320 17838 2.945984 CGTGCCATTGCTGTCGTT 59.054 55.556 0.00 0.00 38.71 3.85
3321 17839 1.440850 CGTGCCATTGCTGTCGTTG 60.441 57.895 0.00 0.00 38.71 4.10
3322 17840 1.654220 GTGCCATTGCTGTCGTTGT 59.346 52.632 0.00 0.00 38.71 3.32
3323 17841 0.385974 GTGCCATTGCTGTCGTTGTC 60.386 55.000 0.00 0.00 38.71 3.18
3324 17842 1.154413 GCCATTGCTGTCGTTGTCG 60.154 57.895 0.00 0.00 34.68 4.35
3325 17843 1.841663 GCCATTGCTGTCGTTGTCGT 61.842 55.000 0.00 0.00 34.85 4.34
3326 17844 0.163788 CCATTGCTGTCGTTGTCGTC 59.836 55.000 0.00 0.00 38.33 4.20
3327 17845 0.179275 CATTGCTGTCGTTGTCGTCG 60.179 55.000 0.00 0.00 38.33 5.12
3328 17846 0.596600 ATTGCTGTCGTTGTCGTCGT 60.597 50.000 0.00 0.00 38.33 4.34
3329 17847 1.204228 TTGCTGTCGTTGTCGTCGTC 61.204 55.000 0.00 0.00 38.33 4.20
3330 17848 2.694615 GCTGTCGTTGTCGTCGTCG 61.695 63.158 0.00 0.00 38.33 5.12
3331 17849 1.368493 CTGTCGTTGTCGTCGTCGT 60.368 57.895 1.33 0.00 38.33 4.34
3332 17850 1.319010 CTGTCGTTGTCGTCGTCGTC 61.319 60.000 1.33 0.00 38.33 4.20
3333 17851 2.128017 TCGTTGTCGTCGTCGTCG 60.128 61.111 5.50 5.50 38.33 5.12
3334 17852 2.424157 CGTTGTCGTCGTCGTCGT 60.424 61.111 11.41 0.00 38.33 4.34
3335 17853 2.405212 CGTTGTCGTCGTCGTCGTC 61.405 63.158 11.41 6.94 38.33 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.181114 ATCACCTACGTGCATGCCAT 59.819 50.000 16.68 2.70 40.04 4.40
3 4 0.461870 TGATCACCTACGTGCATGCC 60.462 55.000 16.68 5.63 40.04 4.40
5 6 1.788886 CGATGATCACCTACGTGCATG 59.211 52.381 3.82 3.82 40.04 4.06
6 7 1.681264 TCGATGATCACCTACGTGCAT 59.319 47.619 0.00 0.00 40.04 3.96
7 8 1.099689 TCGATGATCACCTACGTGCA 58.900 50.000 0.00 0.00 40.04 4.57
8 9 2.120232 CTTCGATGATCACCTACGTGC 58.880 52.381 0.00 0.00 40.04 5.34
10 11 1.749063 TGCTTCGATGATCACCTACGT 59.251 47.619 0.00 0.00 0.00 3.57
11 12 2.120232 GTGCTTCGATGATCACCTACG 58.880 52.381 0.00 2.28 0.00 3.51
12 13 2.860735 GTGTGCTTCGATGATCACCTAC 59.139 50.000 0.00 0.00 0.00 3.18
13 14 2.495669 TGTGTGCTTCGATGATCACCTA 59.504 45.455 0.00 0.00 0.00 3.08
14 15 1.276138 TGTGTGCTTCGATGATCACCT 59.724 47.619 0.00 0.00 0.00 4.00
15 16 1.394917 GTGTGTGCTTCGATGATCACC 59.605 52.381 0.00 0.00 0.00 4.02
17 18 2.453983 TGTGTGTGCTTCGATGATCA 57.546 45.000 0.00 0.00 0.00 2.92
19 20 3.565482 ACTTTTGTGTGTGCTTCGATGAT 59.435 39.130 1.89 0.00 0.00 2.45
21 22 3.038017 CACTTTTGTGTGTGCTTCGATG 58.962 45.455 0.00 0.00 44.94 3.84
22 23 3.338818 CACTTTTGTGTGTGCTTCGAT 57.661 42.857 0.00 0.00 44.94 3.59
63 64 9.973450 TGCTTTAACACTAAAATGCATTCTTAA 57.027 25.926 13.38 5.57 28.52 1.85
64 65 9.405587 GTGCTTTAACACTAAAATGCATTCTTA 57.594 29.630 13.38 11.96 37.58 2.10
65 66 7.925483 TGTGCTTTAACACTAAAATGCATTCTT 59.075 29.630 13.38 11.47 41.30 2.52
66 67 7.382218 GTGTGCTTTAACACTAAAATGCATTCT 59.618 33.333 13.38 0.22 45.69 2.40
67 68 7.501515 GTGTGCTTTAACACTAAAATGCATTC 58.498 34.615 13.38 0.00 45.69 2.67
68 69 6.143758 CGTGTGCTTTAACACTAAAATGCATT 59.856 34.615 5.99 5.99 46.73 3.56
69 70 5.629020 CGTGTGCTTTAACACTAAAATGCAT 59.371 36.000 0.00 0.00 46.73 3.96
71 72 4.973663 ACGTGTGCTTTAACACTAAAATGC 59.026 37.500 5.97 0.00 46.73 3.56
72 73 7.127042 TGTACGTGTGCTTTAACACTAAAATG 58.873 34.615 0.00 0.00 46.73 2.32
73 74 7.249186 TGTACGTGTGCTTTAACACTAAAAT 57.751 32.000 0.00 0.00 46.73 1.82
74 75 6.659361 TGTACGTGTGCTTTAACACTAAAA 57.341 33.333 0.00 0.00 46.73 1.52
76 77 6.659361 TTTGTACGTGTGCTTTAACACTAA 57.341 33.333 0.00 0.00 46.73 2.24
78 79 5.548706 TTTTGTACGTGTGCTTTAACACT 57.451 34.783 0.00 0.00 46.73 3.55
79 80 6.799786 ATTTTTGTACGTGTGCTTTAACAC 57.200 33.333 0.00 0.00 45.70 3.32
80 81 6.628065 CGTATTTTTGTACGTGTGCTTTAACA 59.372 34.615 0.00 0.00 41.75 2.41
81 82 7.003354 CGTATTTTTGTACGTGTGCTTTAAC 57.997 36.000 0.00 0.00 41.75 2.01
93 94 5.335171 GCGACTGTTTGACGTATTTTTGTAC 59.665 40.000 0.00 0.00 36.31 2.90
94 95 5.006455 TGCGACTGTTTGACGTATTTTTGTA 59.994 36.000 0.00 0.00 36.31 2.41
95 96 4.201832 TGCGACTGTTTGACGTATTTTTGT 60.202 37.500 0.00 0.00 36.31 2.83
97 98 4.034742 AGTGCGACTGTTTGACGTATTTTT 59.965 37.500 0.00 0.00 36.31 1.94
98 99 3.558418 AGTGCGACTGTTTGACGTATTTT 59.442 39.130 0.00 0.00 36.31 1.82
99 100 3.128349 AGTGCGACTGTTTGACGTATTT 58.872 40.909 0.00 0.00 36.31 1.40
100 101 2.729882 GAGTGCGACTGTTTGACGTATT 59.270 45.455 0.00 0.00 36.31 1.89
101 102 2.287970 TGAGTGCGACTGTTTGACGTAT 60.288 45.455 0.00 0.00 36.31 3.06
102 103 1.065851 TGAGTGCGACTGTTTGACGTA 59.934 47.619 0.00 0.00 36.31 3.57
103 104 0.179121 TGAGTGCGACTGTTTGACGT 60.179 50.000 0.00 0.00 36.31 4.34
104 105 0.229753 GTGAGTGCGACTGTTTGACG 59.770 55.000 0.00 0.00 36.94 4.35
105 106 1.286501 TGTGAGTGCGACTGTTTGAC 58.713 50.000 0.00 0.00 0.00 3.18
106 107 2.017138 TTGTGAGTGCGACTGTTTGA 57.983 45.000 0.00 0.00 0.00 2.69
107 108 2.440501 GTTTGTGAGTGCGACTGTTTG 58.559 47.619 0.00 0.00 0.00 2.93
108 109 1.400494 GGTTTGTGAGTGCGACTGTTT 59.600 47.619 0.00 0.00 0.00 2.83
110 111 0.107897 TGGTTTGTGAGTGCGACTGT 60.108 50.000 0.00 0.00 0.00 3.55
112 113 2.413837 GTATGGTTTGTGAGTGCGACT 58.586 47.619 0.00 0.00 0.00 4.18
113 114 1.463444 GGTATGGTTTGTGAGTGCGAC 59.537 52.381 0.00 0.00 0.00 5.19
116 117 0.168128 GCGGTATGGTTTGTGAGTGC 59.832 55.000 0.00 0.00 0.00 4.40
117 118 1.518325 TGCGGTATGGTTTGTGAGTG 58.482 50.000 0.00 0.00 0.00 3.51
119 120 2.355197 TCATGCGGTATGGTTTGTGAG 58.645 47.619 6.23 0.00 37.39 3.51
120 121 2.481289 TCATGCGGTATGGTTTGTGA 57.519 45.000 6.23 0.00 37.39 3.58
121 122 3.057596 AGTTTCATGCGGTATGGTTTGTG 60.058 43.478 6.23 0.00 37.39 3.33
123 124 3.848272 AGTTTCATGCGGTATGGTTTG 57.152 42.857 6.23 0.00 37.39 2.93
124 125 4.634443 GTCTAGTTTCATGCGGTATGGTTT 59.366 41.667 6.23 0.00 37.39 3.27
127 128 3.131396 GGTCTAGTTTCATGCGGTATGG 58.869 50.000 6.23 0.00 37.39 2.74
128 129 3.131396 GGGTCTAGTTTCATGCGGTATG 58.869 50.000 0.00 0.00 38.17 2.39
129 130 2.769663 TGGGTCTAGTTTCATGCGGTAT 59.230 45.455 0.00 0.00 0.00 2.73
130 131 2.093869 GTGGGTCTAGTTTCATGCGGTA 60.094 50.000 0.00 0.00 0.00 4.02
132 133 1.338674 TGTGGGTCTAGTTTCATGCGG 60.339 52.381 0.00 0.00 0.00 5.69
133 134 2.002586 CTGTGGGTCTAGTTTCATGCG 58.997 52.381 0.00 0.00 0.00 4.73
134 135 1.740025 GCTGTGGGTCTAGTTTCATGC 59.260 52.381 0.00 0.00 0.00 4.06
135 136 3.005554 CAGCTGTGGGTCTAGTTTCATG 58.994 50.000 5.25 0.00 0.00 3.07
136 137 2.906389 TCAGCTGTGGGTCTAGTTTCAT 59.094 45.455 14.67 0.00 0.00 2.57
140 141 2.616510 GCATTCAGCTGTGGGTCTAGTT 60.617 50.000 14.67 0.00 41.15 2.24
142 143 1.065926 TGCATTCAGCTGTGGGTCTAG 60.066 52.381 14.67 0.00 45.94 2.43
143 144 0.983467 TGCATTCAGCTGTGGGTCTA 59.017 50.000 14.67 0.00 45.94 2.59
145 146 0.454600 CATGCATTCAGCTGTGGGTC 59.545 55.000 14.67 1.44 45.94 4.46
146 147 1.601419 GCATGCATTCAGCTGTGGGT 61.601 55.000 14.21 0.00 45.94 4.51
149 150 1.872234 GCGCATGCATTCAGCTGTG 60.872 57.895 19.57 6.80 45.94 3.66
150 151 1.989966 GAGCGCATGCATTCAGCTGT 61.990 55.000 19.73 0.00 46.23 4.40
152 153 1.715862 CTGAGCGCATGCATTCAGCT 61.716 55.000 26.12 21.59 46.23 4.24
153 154 1.298413 CTGAGCGCATGCATTCAGC 60.298 57.895 26.12 17.86 46.23 4.26
154 155 1.355563 CCTGAGCGCATGCATTCAG 59.644 57.895 28.57 28.57 46.23 3.02
155 156 0.107752 TACCTGAGCGCATGCATTCA 60.108 50.000 19.57 18.19 46.23 2.57
156 157 1.233019 ATACCTGAGCGCATGCATTC 58.767 50.000 19.57 14.47 46.23 2.67
160 161 1.143305 CTGTATACCTGAGCGCATGC 58.857 55.000 11.47 7.91 43.24 4.06
161 162 2.800881 TCTGTATACCTGAGCGCATG 57.199 50.000 11.47 0.00 0.00 4.06
162 163 4.280929 TGTATTCTGTATACCTGAGCGCAT 59.719 41.667 11.47 0.00 38.69 4.73
165 166 5.183014 TGTGTATTCTGTATACCTGAGCG 57.817 43.478 0.00 0.00 38.69 5.03
167 168 6.515832 TGCATGTGTATTCTGTATACCTGAG 58.484 40.000 0.00 0.00 38.69 3.35
168 169 6.478512 TGCATGTGTATTCTGTATACCTGA 57.521 37.500 0.00 0.00 38.69 3.86
170 171 6.467677 GGATGCATGTGTATTCTGTATACCT 58.532 40.000 2.46 0.00 38.69 3.08
171 172 5.643777 GGGATGCATGTGTATTCTGTATACC 59.356 44.000 2.46 0.00 38.69 2.73
172 173 6.230472 TGGGATGCATGTGTATTCTGTATAC 58.770 40.000 2.46 0.00 39.69 1.47
173 174 6.432403 TGGGATGCATGTGTATTCTGTATA 57.568 37.500 2.46 0.00 0.00 1.47
174 175 5.308976 TGGGATGCATGTGTATTCTGTAT 57.691 39.130 2.46 0.00 0.00 2.29
175 176 4.769345 TGGGATGCATGTGTATTCTGTA 57.231 40.909 2.46 0.00 0.00 2.74
176 177 3.650281 TGGGATGCATGTGTATTCTGT 57.350 42.857 2.46 0.00 0.00 3.41
177 178 4.987408 TTTGGGATGCATGTGTATTCTG 57.013 40.909 2.46 0.00 0.00 3.02
197 198 3.790089 ATCTCCTCCGTTGGTCTTTTT 57.210 42.857 0.00 0.00 0.00 1.94
198 199 4.041198 TGTTATCTCCTCCGTTGGTCTTTT 59.959 41.667 0.00 0.00 0.00 2.27
199 200 3.581332 TGTTATCTCCTCCGTTGGTCTTT 59.419 43.478 0.00 0.00 0.00 2.52
200 201 3.170717 TGTTATCTCCTCCGTTGGTCTT 58.829 45.455 0.00 0.00 0.00 3.01
201 202 2.816411 TGTTATCTCCTCCGTTGGTCT 58.184 47.619 0.00 0.00 0.00 3.85
203 204 2.838202 ACATGTTATCTCCTCCGTTGGT 59.162 45.455 0.00 0.00 0.00 3.67
204 205 3.543680 ACATGTTATCTCCTCCGTTGG 57.456 47.619 0.00 0.00 0.00 3.77
205 206 4.503910 TGAACATGTTATCTCCTCCGTTG 58.496 43.478 11.95 0.00 0.00 4.10
206 207 4.759782 CTGAACATGTTATCTCCTCCGTT 58.240 43.478 11.95 0.00 0.00 4.44
207 208 3.430929 GCTGAACATGTTATCTCCTCCGT 60.431 47.826 11.95 0.00 0.00 4.69
208 209 3.126831 GCTGAACATGTTATCTCCTCCG 58.873 50.000 11.95 0.00 0.00 4.63
209 210 4.125703 CAGCTGAACATGTTATCTCCTCC 58.874 47.826 11.95 0.00 0.00 4.30
210 211 4.569966 CACAGCTGAACATGTTATCTCCTC 59.430 45.833 23.35 0.00 0.00 3.71
211 212 4.511527 CACAGCTGAACATGTTATCTCCT 58.488 43.478 23.35 1.24 0.00 3.69
212 213 3.064545 GCACAGCTGAACATGTTATCTCC 59.935 47.826 23.35 0.00 0.00 3.71
213 214 3.937706 AGCACAGCTGAACATGTTATCTC 59.062 43.478 23.35 0.00 37.57 2.75
214 215 3.937706 GAGCACAGCTGAACATGTTATCT 59.062 43.478 23.35 6.01 39.88 1.98
215 216 3.686241 TGAGCACAGCTGAACATGTTATC 59.314 43.478 23.35 8.56 39.88 1.75
216 217 3.438087 GTGAGCACAGCTGAACATGTTAT 59.562 43.478 23.35 0.00 39.88 1.89
217 218 2.807967 GTGAGCACAGCTGAACATGTTA 59.192 45.455 23.35 0.00 39.88 2.41
218 219 1.605710 GTGAGCACAGCTGAACATGTT 59.394 47.619 23.35 11.78 39.88 2.71
219 220 1.202734 AGTGAGCACAGCTGAACATGT 60.203 47.619 23.35 0.00 39.88 3.21
221 222 1.347050 AGAGTGAGCACAGCTGAACAT 59.653 47.619 23.35 2.64 39.88 2.71
222 223 0.755079 AGAGTGAGCACAGCTGAACA 59.245 50.000 23.35 11.35 39.88 3.18
223 224 1.269988 TGAGAGTGAGCACAGCTGAAC 60.270 52.381 23.35 11.81 39.88 3.18
224 225 1.043022 TGAGAGTGAGCACAGCTGAA 58.957 50.000 23.35 0.00 39.88 3.02
226 227 2.955477 TATGAGAGTGAGCACAGCTG 57.045 50.000 13.48 13.48 39.88 4.24
227 228 3.969287 TTTATGAGAGTGAGCACAGCT 57.031 42.857 3.19 0.00 43.88 4.24
228 229 4.186926 TCATTTATGAGAGTGAGCACAGC 58.813 43.478 3.19 0.00 32.11 4.40
229 230 6.922247 ATTCATTTATGAGAGTGAGCACAG 57.078 37.500 3.19 0.00 38.19 3.66
230 231 7.692460 AAATTCATTTATGAGAGTGAGCACA 57.308 32.000 3.19 0.00 38.19 4.57
231 232 7.699812 GGAAAATTCATTTATGAGAGTGAGCAC 59.300 37.037 0.00 0.00 38.19 4.40
233 234 7.067981 AGGGAAAATTCATTTATGAGAGTGAGC 59.932 37.037 0.00 0.00 38.19 4.26
234 235 8.517062 AGGGAAAATTCATTTATGAGAGTGAG 57.483 34.615 0.00 0.00 38.19 3.51
235 236 9.973661 TTAGGGAAAATTCATTTATGAGAGTGA 57.026 29.630 0.00 0.00 38.19 3.41
244 245 9.707957 TGAGCCTAATTAGGGAAAATTCATTTA 57.292 29.630 28.81 0.78 43.82 1.40
246 247 8.608185 TTGAGCCTAATTAGGGAAAATTCATT 57.392 30.769 28.81 0.09 43.82 2.57
249 250 6.925718 GCATTGAGCCTAATTAGGGAAAATTC 59.074 38.462 28.81 12.98 43.82 2.17
250 251 6.820335 GCATTGAGCCTAATTAGGGAAAATT 58.180 36.000 28.81 0.00 43.82 1.82
251 252 6.410942 GCATTGAGCCTAATTAGGGAAAAT 57.589 37.500 28.81 10.32 43.82 1.82
267 268 7.172190 CCTGTACCAGAAATATGTAGCATTGAG 59.828 40.741 0.00 0.00 32.44 3.02
268 269 6.992123 CCTGTACCAGAAATATGTAGCATTGA 59.008 38.462 0.00 0.00 32.44 2.57
269 270 6.205464 CCCTGTACCAGAAATATGTAGCATTG 59.795 42.308 0.00 0.00 32.44 2.82
270 271 6.299141 CCCTGTACCAGAAATATGTAGCATT 58.701 40.000 0.00 0.00 32.44 3.56
271 272 5.221925 CCCCTGTACCAGAAATATGTAGCAT 60.222 44.000 0.00 0.00 32.44 3.79
272 273 4.102524 CCCCTGTACCAGAAATATGTAGCA 59.897 45.833 0.00 0.00 32.44 3.49
273 274 4.642429 CCCCTGTACCAGAAATATGTAGC 58.358 47.826 0.00 0.00 32.44 3.58
274 275 4.102524 TGCCCCTGTACCAGAAATATGTAG 59.897 45.833 0.00 0.00 32.44 2.74
275 276 4.041464 TGCCCCTGTACCAGAAATATGTA 58.959 43.478 0.00 0.00 32.44 2.29
276 277 2.849943 TGCCCCTGTACCAGAAATATGT 59.150 45.455 0.00 0.00 32.44 2.29
278 279 4.601406 TTTGCCCCTGTACCAGAAATAT 57.399 40.909 0.00 0.00 32.44 1.28
279 280 4.390129 TTTTGCCCCTGTACCAGAAATA 57.610 40.909 0.00 0.00 32.44 1.40
280 281 2.990740 TTTGCCCCTGTACCAGAAAT 57.009 45.000 0.00 0.00 32.44 2.17
281 282 2.757894 TTTTGCCCCTGTACCAGAAA 57.242 45.000 0.00 0.00 32.44 2.52
283 284 1.203001 CCTTTTTGCCCCTGTACCAGA 60.203 52.381 0.00 0.00 32.44 3.86
284 285 1.256812 CCTTTTTGCCCCTGTACCAG 58.743 55.000 0.00 0.00 0.00 4.00
285 286 0.558712 ACCTTTTTGCCCCTGTACCA 59.441 50.000 0.00 0.00 0.00 3.25
286 287 1.203013 AGACCTTTTTGCCCCTGTACC 60.203 52.381 0.00 0.00 0.00 3.34
289 290 1.217942 AGAAGACCTTTTTGCCCCTGT 59.782 47.619 0.00 0.00 0.00 4.00
291 292 1.499007 TGAGAAGACCTTTTTGCCCCT 59.501 47.619 0.00 0.00 0.00 4.79
292 293 1.613925 GTGAGAAGACCTTTTTGCCCC 59.386 52.381 0.00 0.00 0.00 5.80
293 294 1.266989 CGTGAGAAGACCTTTTTGCCC 59.733 52.381 0.00 0.00 0.00 5.36
295 296 2.354821 ACACGTGAGAAGACCTTTTTGC 59.645 45.455 25.01 0.00 0.00 3.68
298 299 4.395959 TGTACACGTGAGAAGACCTTTT 57.604 40.909 25.01 0.00 0.00 2.27
299 300 4.395959 TTGTACACGTGAGAAGACCTTT 57.604 40.909 25.01 0.00 0.00 3.11
300 301 4.395959 TTTGTACACGTGAGAAGACCTT 57.604 40.909 25.01 0.00 0.00 3.50
301 302 4.395959 TTTTGTACACGTGAGAAGACCT 57.604 40.909 25.01 0.00 0.00 3.85
302 303 4.748102 TCATTTTGTACACGTGAGAAGACC 59.252 41.667 25.01 1.97 0.00 3.85
303 304 5.900339 TCATTTTGTACACGTGAGAAGAC 57.100 39.130 25.01 11.79 0.00 3.01
304 305 6.046593 AGTTCATTTTGTACACGTGAGAAGA 58.953 36.000 25.01 6.57 0.00 2.87
306 307 7.204604 TCTAGTTCATTTTGTACACGTGAGAA 58.795 34.615 25.01 7.98 0.00 2.87
307 308 6.741109 TCTAGTTCATTTTGTACACGTGAGA 58.259 36.000 25.01 6.70 0.00 3.27
308 309 6.641314 ACTCTAGTTCATTTTGTACACGTGAG 59.359 38.462 25.01 4.95 0.00 3.51
309 310 6.419710 CACTCTAGTTCATTTTGTACACGTGA 59.580 38.462 25.01 2.68 0.00 4.35
310 311 6.200286 ACACTCTAGTTCATTTTGTACACGTG 59.800 38.462 15.48 15.48 0.00 4.49
312 313 6.419710 TGACACTCTAGTTCATTTTGTACACG 59.580 38.462 0.00 0.00 0.00 4.49
317 318 9.823647 CCTATATGACACTCTAGTTCATTTTGT 57.176 33.333 10.78 0.00 32.38 2.83
318 319 9.265901 CCCTATATGACACTCTAGTTCATTTTG 57.734 37.037 10.78 6.64 32.38 2.44
319 320 9.213777 TCCCTATATGACACTCTAGTTCATTTT 57.786 33.333 10.78 5.31 32.38 1.82
320 321 8.783660 TCCCTATATGACACTCTAGTTCATTT 57.216 34.615 10.78 7.62 32.38 2.32
321 322 8.783660 TTCCCTATATGACACTCTAGTTCATT 57.216 34.615 10.78 5.21 32.38 2.57
322 323 8.783660 TTTCCCTATATGACACTCTAGTTCAT 57.216 34.615 10.51 10.51 33.60 2.57
323 324 8.059461 TCTTTCCCTATATGACACTCTAGTTCA 58.941 37.037 0.00 0.00 0.00 3.18
324 325 8.466617 TCTTTCCCTATATGACACTCTAGTTC 57.533 38.462 0.00 0.00 0.00 3.01
325 326 8.840200 TTCTTTCCCTATATGACACTCTAGTT 57.160 34.615 0.00 0.00 0.00 2.24
326 327 8.840200 TTTCTTTCCCTATATGACACTCTAGT 57.160 34.615 0.00 0.00 0.00 2.57
341 342 9.280456 TGACCTATAGTCTTAATTTCTTTCCCT 57.720 33.333 0.00 0.00 46.46 4.20
393 394 9.540538 TCCCTTAAAATCATGTTCCTTATTTGA 57.459 29.630 0.00 0.00 0.00 2.69
394 395 9.807649 CTCCCTTAAAATCATGTTCCTTATTTG 57.192 33.333 0.00 0.00 0.00 2.32
395 396 9.547279 ACTCCCTTAAAATCATGTTCCTTATTT 57.453 29.630 0.00 0.00 0.00 1.40
397 398 8.116026 ACACTCCCTTAAAATCATGTTCCTTAT 58.884 33.333 0.00 0.00 0.00 1.73
398 399 7.466804 ACACTCCCTTAAAATCATGTTCCTTA 58.533 34.615 0.00 0.00 0.00 2.69
400 401 5.892348 ACACTCCCTTAAAATCATGTTCCT 58.108 37.500 0.00 0.00 0.00 3.36
401 402 5.710099 TGACACTCCCTTAAAATCATGTTCC 59.290 40.000 0.00 0.00 0.00 3.62
403 404 7.595819 TTTGACACTCCCTTAAAATCATGTT 57.404 32.000 0.00 0.00 0.00 2.71
404 405 7.781324 ATTTGACACTCCCTTAAAATCATGT 57.219 32.000 0.00 0.00 0.00 3.21
405 406 9.793252 CTTATTTGACACTCCCTTAAAATCATG 57.207 33.333 0.00 0.00 0.00 3.07
406 407 8.971073 CCTTATTTGACACTCCCTTAAAATCAT 58.029 33.333 0.00 0.00 0.00 2.45
407 408 8.167392 TCCTTATTTGACACTCCCTTAAAATCA 58.833 33.333 0.00 0.00 0.00 2.57
410 411 8.950007 ATTCCTTATTTGACACTCCCTTAAAA 57.050 30.769 0.00 0.00 0.00 1.52
411 412 8.950007 AATTCCTTATTTGACACTCCCTTAAA 57.050 30.769 0.00 0.00 0.00 1.52
412 413 8.390921 AGAATTCCTTATTTGACACTCCCTTAA 58.609 33.333 0.65 0.00 0.00 1.85
413 414 7.928873 AGAATTCCTTATTTGACACTCCCTTA 58.071 34.615 0.65 0.00 0.00 2.69
415 416 6.216456 AGAGAATTCCTTATTTGACACTCCCT 59.784 38.462 0.65 0.00 0.00 4.20
418 419 7.334858 AGGAGAGAATTCCTTATTTGACACTC 58.665 38.462 0.65 0.00 45.35 3.51
419 420 7.264294 AGGAGAGAATTCCTTATTTGACACT 57.736 36.000 0.65 0.00 45.35 3.55
431 432 4.443621 CCTTAAACGGAGGAGAGAATTCC 58.556 47.826 0.65 0.00 36.33 3.01
432 433 4.081031 ACCCTTAAACGGAGGAGAGAATTC 60.081 45.833 0.00 0.00 36.33 2.17
433 434 3.844804 ACCCTTAAACGGAGGAGAGAATT 59.155 43.478 0.00 0.00 36.33 2.17
434 435 3.451540 GACCCTTAAACGGAGGAGAGAAT 59.548 47.826 0.00 0.00 36.33 2.40
435 436 2.830321 GACCCTTAAACGGAGGAGAGAA 59.170 50.000 0.00 0.00 36.33 2.87
436 437 2.454538 GACCCTTAAACGGAGGAGAGA 58.545 52.381 0.00 0.00 36.33 3.10
437 438 1.481363 GGACCCTTAAACGGAGGAGAG 59.519 57.143 0.00 0.00 36.33 3.20
438 439 1.565067 GGACCCTTAAACGGAGGAGA 58.435 55.000 0.00 0.00 36.33 3.71
440 441 0.117742 AGGGACCCTTAAACGGAGGA 59.882 55.000 7.44 0.00 36.33 3.71
441 442 0.540454 GAGGGACCCTTAAACGGAGG 59.460 60.000 16.22 0.00 31.76 4.30
442 443 1.481363 GAGAGGGACCCTTAAACGGAG 59.519 57.143 16.22 0.00 31.76 4.63
443 444 1.078324 AGAGAGGGACCCTTAAACGGA 59.922 52.381 16.22 0.00 31.76 4.69
445 446 3.007614 TCAAAGAGAGGGACCCTTAAACG 59.992 47.826 16.22 2.46 31.76 3.60
446 447 4.635699 TCAAAGAGAGGGACCCTTAAAC 57.364 45.455 16.22 0.91 31.76 2.01
447 448 5.656549 TTTCAAAGAGAGGGACCCTTAAA 57.343 39.130 16.22 4.61 31.76 1.52
448 449 5.312178 TGATTTCAAAGAGAGGGACCCTTAA 59.688 40.000 16.22 0.17 31.76 1.85
449 450 4.849810 TGATTTCAAAGAGAGGGACCCTTA 59.150 41.667 16.22 0.00 31.76 2.69
450 451 3.657727 TGATTTCAAAGAGAGGGACCCTT 59.342 43.478 16.22 4.58 31.76 3.95
458 459 7.444629 TTGACATCCTTGATTTCAAAGAGAG 57.555 36.000 3.80 0.00 36.30 3.20
473 474 7.126421 ACTCCTAATACTGTTGATTGACATCCT 59.874 37.037 0.00 0.00 0.00 3.24
474 475 7.275920 ACTCCTAATACTGTTGATTGACATCC 58.724 38.462 0.00 0.00 0.00 3.51
476 477 8.982723 AGTACTCCTAATACTGTTGATTGACAT 58.017 33.333 0.00 0.00 31.54 3.06
477 478 8.362464 AGTACTCCTAATACTGTTGATTGACA 57.638 34.615 0.00 0.00 31.54 3.58
529 534 4.436050 CGTGAAATCTTCATGTGCACCTAC 60.436 45.833 15.69 0.00 42.47 3.18
533 538 2.245096 GCGTGAAATCTTCATGTGCAC 58.755 47.619 10.75 10.75 46.07 4.57
575 580 3.498397 CCACTCTGTTTGCTTAACACGAT 59.502 43.478 0.00 0.00 41.73 3.73
576 581 2.869801 CCACTCTGTTTGCTTAACACGA 59.130 45.455 0.00 3.78 41.73 4.35
600 605 3.383505 TGCTAATAAGTCGCTAGAGGCAA 59.616 43.478 0.00 0.00 41.91 4.52
620 625 0.389687 GACTCACTGGAGAGCAGTGC 60.390 60.000 7.13 7.13 46.89 4.40
623 628 0.108709 GCTGACTCACTGGAGAGCAG 60.109 60.000 0.00 6.80 44.26 4.24
624 629 0.541530 AGCTGACTCACTGGAGAGCA 60.542 55.000 7.77 1.71 44.26 4.26
625 630 0.108709 CAGCTGACTCACTGGAGAGC 60.109 60.000 8.42 0.00 44.26 4.09
626 631 1.067706 CACAGCTGACTCACTGGAGAG 60.068 57.143 23.35 0.00 44.26 3.20
627 632 0.964700 CACAGCTGACTCACTGGAGA 59.035 55.000 23.35 0.00 44.26 3.71
628 633 0.669932 GCACAGCTGACTCACTGGAG 60.670 60.000 23.35 0.00 46.96 3.86
629 634 1.368950 GCACAGCTGACTCACTGGA 59.631 57.895 23.35 0.00 38.25 3.86
630 635 2.025969 CGCACAGCTGACTCACTGG 61.026 63.158 23.35 0.00 38.25 4.00
631 636 1.300465 ACGCACAGCTGACTCACTG 60.300 57.895 23.35 8.15 39.86 3.66
632 637 1.300465 CACGCACAGCTGACTCACT 60.300 57.895 23.35 0.00 0.00 3.41
634 639 1.592400 CACACGCACAGCTGACTCA 60.592 57.895 23.35 0.00 0.00 3.41
635 640 2.313172 CCACACGCACAGCTGACTC 61.313 63.158 23.35 7.62 0.00 3.36
636 641 2.280389 CCACACGCACAGCTGACT 60.280 61.111 23.35 0.00 0.00 3.41
637 642 3.349006 CCCACACGCACAGCTGAC 61.349 66.667 23.35 11.17 0.00 3.51
820 3821 7.014134 CCATGCCAAACCATTAGTATGAATGTA 59.986 37.037 0.00 0.00 35.42 2.29
821 3822 6.183360 CCATGCCAAACCATTAGTATGAATGT 60.183 38.462 0.00 0.00 35.42 2.71
822 3823 6.218019 CCATGCCAAACCATTAGTATGAATG 58.782 40.000 0.00 0.00 36.70 2.67
866 3867 4.830600 TGCCATGAGTCGGATATACTACAA 59.169 41.667 0.00 0.00 0.00 2.41
868 3869 4.217767 TGTGCCATGAGTCGGATATACTAC 59.782 45.833 0.00 0.00 0.00 2.73
869 3870 4.217767 GTGTGCCATGAGTCGGATATACTA 59.782 45.833 0.00 0.00 0.00 1.82
940 3942 7.842454 TGGGGATAATATAGGGGAAATTTTGT 58.158 34.615 0.00 0.00 0.00 2.83
982 3995 3.681417 CGCATCTCTTTTCTCACATGTGA 59.319 43.478 26.33 26.33 38.06 3.58
1034 4053 1.267261 GGCAGATGATGATGAGCTTGC 59.733 52.381 0.00 0.00 0.00 4.01
1090 4118 1.199327 TGTCACCTCATTCTCGTCGTC 59.801 52.381 0.00 0.00 0.00 4.20
1091 4119 1.244816 TGTCACCTCATTCTCGTCGT 58.755 50.000 0.00 0.00 0.00 4.34
1092 4120 2.095212 TCTTGTCACCTCATTCTCGTCG 60.095 50.000 0.00 0.00 0.00 5.12
1095 4123 2.254459 CGTCTTGTCACCTCATTCTCG 58.746 52.381 0.00 0.00 0.00 4.04
1189 4217 0.972134 CAGCTCCTGGACAGTGAAGA 59.028 55.000 0.00 0.00 0.00 2.87
1194 4225 3.181461 GCATATTACAGCTCCTGGACAGT 60.181 47.826 0.00 0.00 35.51 3.55
1195 4226 3.070734 AGCATATTACAGCTCCTGGACAG 59.929 47.826 0.00 0.00 36.00 3.51
1203 4274 3.879295 TCAAGCCAAGCATATTACAGCTC 59.121 43.478 0.00 0.00 40.90 4.09
1204 4275 3.889815 TCAAGCCAAGCATATTACAGCT 58.110 40.909 0.00 0.00 44.31 4.24
1212 4283 1.395635 CTGCCATCAAGCCAAGCATA 58.604 50.000 0.00 0.00 32.11 3.14
1257 4353 4.158579 TCACAGTCATCGTAGAGCTCATTT 59.841 41.667 17.77 0.00 43.63 2.32
1410 11320 1.051812 CCTCACTGTGGACCTTCAGT 58.948 55.000 8.11 14.20 44.32 3.41
1525 11469 2.564062 AGCACTGAAATGGTGAAATGGG 59.436 45.455 0.00 0.00 36.89 4.00
1622 11572 6.427150 TGTTCGAACTTCTTAATGCAAAGTC 58.573 36.000 27.32 0.00 32.24 3.01
1642 11598 8.237267 ACAAATAAAGGTCGATCAGAATTGTTC 58.763 33.333 0.00 0.00 0.00 3.18
1665 11621 3.473923 TCTTGACTGATGCTGACACAA 57.526 42.857 0.00 0.00 0.00 3.33
1666 11622 3.133691 GTTCTTGACTGATGCTGACACA 58.866 45.455 0.00 0.00 0.00 3.72
1667 11623 3.397482 AGTTCTTGACTGATGCTGACAC 58.603 45.455 0.00 0.00 37.17 3.67
1668 11624 3.758755 AGTTCTTGACTGATGCTGACA 57.241 42.857 0.00 0.00 37.17 3.58
1686 11646 8.621286 ACGAGTTTTCAATGTTCTTGATAAAGT 58.379 29.630 0.00 0.00 0.00 2.66
1693 11656 7.164171 CACTTGTACGAGTTTTCAATGTTCTTG 59.836 37.037 13.39 0.00 0.00 3.02
1712 11675 7.984422 ATCTGATGAAATGTGAACACTTGTA 57.016 32.000 6.51 0.00 0.00 2.41
1736 11699 6.133356 ACTCTACAAATTCCAGGGTGAAAAA 58.867 36.000 0.00 0.00 0.00 1.94
1753 11716 6.444633 GTGCTGTACTTTGTCTTACTCTACA 58.555 40.000 0.00 0.00 0.00 2.74
1754 11717 5.568296 CGTGCTGTACTTTGTCTTACTCTAC 59.432 44.000 0.00 0.00 0.00 2.59
1755 11718 5.335426 CCGTGCTGTACTTTGTCTTACTCTA 60.335 44.000 0.00 0.00 0.00 2.43
1756 11719 4.547532 CGTGCTGTACTTTGTCTTACTCT 58.452 43.478 0.00 0.00 0.00 3.24
1757 11720 3.673809 CCGTGCTGTACTTTGTCTTACTC 59.326 47.826 0.00 0.00 0.00 2.59
1758 11721 3.069158 ACCGTGCTGTACTTTGTCTTACT 59.931 43.478 0.00 0.00 0.00 2.24
1759 11722 3.387397 ACCGTGCTGTACTTTGTCTTAC 58.613 45.455 0.00 0.00 0.00 2.34
1789 11773 8.345565 AGACATTTTTCTGACAAGTCACATAAC 58.654 33.333 0.00 0.00 35.46 1.89
1818 11802 2.022195 CCATCTGCACAAGGGAAGATG 58.978 52.381 12.55 12.55 43.65 2.90
1914 11898 4.781959 CGGCCGGCATTTGCTGTG 62.782 66.667 30.85 1.52 45.66 3.66
2084 12068 2.636412 CCGCTCTCACCGTCCTCAA 61.636 63.158 0.00 0.00 0.00 3.02
2119 12103 3.918253 GACATGCCGCACCCTTCCA 62.918 63.158 0.00 0.00 0.00 3.53
2130 12114 0.801251 GCAGAGTGTGAAGACATGCC 59.199 55.000 0.00 0.00 33.63 4.40
2181 12165 0.036952 ATTCAGTCCAGCACGACCTG 60.037 55.000 0.00 0.00 32.91 4.00
2182 12166 0.687354 AATTCAGTCCAGCACGACCT 59.313 50.000 0.00 0.00 32.91 3.85
2223 12213 0.403271 AGCAACCTTGGACAGAGCAT 59.597 50.000 0.00 0.00 0.00 3.79
2231 12221 0.843309 TCTGGTGAAGCAACCTTGGA 59.157 50.000 5.04 0.00 41.16 3.53
2355 12370 8.034215 CACCTCAATTCTGGCACAAAAATATAA 58.966 33.333 0.00 0.00 38.70 0.98
2381 12397 2.213499 ACAGCACTAACAGCAGTTCAC 58.787 47.619 0.00 0.00 39.15 3.18
2382 12398 2.620251 ACAGCACTAACAGCAGTTCA 57.380 45.000 0.00 0.00 39.15 3.18
2512 13149 0.956633 TAGAGTATTAGCCCCACGCG 59.043 55.000 3.53 3.53 44.76 6.01
2633 13283 1.600916 GGCGAGCAGGGAAACTTGT 60.601 57.895 0.00 0.00 40.10 3.16
2742 17181 6.195165 CGAAGGTGCTAAAATGCTCTATTTC 58.805 40.000 0.00 0.00 38.01 2.17
2766 17205 6.635030 TCTTTAGAGCAGAAAACCTTTTCC 57.365 37.500 6.85 0.00 45.84 3.13
2827 17277 7.939782 TGTTTTCTGCTTGTAAATTCTCATGA 58.060 30.769 0.00 0.00 0.00 3.07
2833 17283 9.899226 AATAGTCTGTTTTCTGCTTGTAAATTC 57.101 29.630 0.00 0.00 0.00 2.17
2899 17409 4.657436 ACGGTGCCTACAATTTTTGAAA 57.343 36.364 0.00 0.00 0.00 2.69
2966 17476 5.016831 AGTGGGATCCAAATTACCAAGTTC 58.983 41.667 15.23 0.00 34.18 3.01
2977 17487 4.325030 GGGAGTAATTCAGTGGGATCCAAA 60.325 45.833 15.23 0.00 34.18 3.28
2983 17493 4.141482 GCATAAGGGAGTAATTCAGTGGGA 60.141 45.833 0.00 0.00 0.00 4.37
3100 17618 0.039708 GTTTCAGGCTTGCTGTGCTC 60.040 55.000 0.00 0.00 0.00 4.26
3163 17681 6.437162 AGTTAATCCAATTGCCAACTGTGTAT 59.563 34.615 0.00 0.00 0.00 2.29
3177 17695 6.594159 CCGTCTACTTTGTGAGTTAATCCAAT 59.406 38.462 0.00 0.00 39.86 3.16
3192 17710 1.344763 AGCAGCAACTCCGTCTACTTT 59.655 47.619 0.00 0.00 0.00 2.66
3195 17713 0.243907 TGAGCAGCAACTCCGTCTAC 59.756 55.000 0.00 0.00 35.72 2.59
3196 17714 0.528017 CTGAGCAGCAACTCCGTCTA 59.472 55.000 0.00 0.00 35.72 2.59
3197 17715 1.291588 CTGAGCAGCAACTCCGTCT 59.708 57.895 0.00 0.00 35.72 4.18
3198 17716 3.867771 CTGAGCAGCAACTCCGTC 58.132 61.111 0.00 0.00 35.72 4.79
3208 17726 2.186384 CCTCCCTTCGCTGAGCAG 59.814 66.667 4.88 0.00 0.00 4.24
3209 17727 2.604686 ACCTCCCTTCGCTGAGCA 60.605 61.111 4.88 0.00 0.00 4.26
3210 17728 2.185608 GACCTCCCTTCGCTGAGC 59.814 66.667 0.00 0.00 0.00 4.26
3211 17729 1.684049 AGGACCTCCCTTCGCTGAG 60.684 63.158 0.00 0.00 44.85 3.35
3212 17730 1.984570 CAGGACCTCCCTTCGCTGA 60.985 63.158 0.00 0.00 44.85 4.26
3213 17731 2.581354 CAGGACCTCCCTTCGCTG 59.419 66.667 0.00 0.00 44.85 5.18
3214 17732 2.685380 CCAGGACCTCCCTTCGCT 60.685 66.667 0.00 0.00 44.85 4.93
3215 17733 3.787001 CCCAGGACCTCCCTTCGC 61.787 72.222 0.00 0.00 44.85 4.70
3216 17734 3.787001 GCCCAGGACCTCCCTTCG 61.787 72.222 0.00 0.00 44.85 3.79
3217 17735 3.787001 CGCCCAGGACCTCCCTTC 61.787 72.222 0.00 0.00 44.85 3.46
3221 17739 4.779733 TCTCCGCCCAGGACCTCC 62.780 72.222 0.00 0.00 45.98 4.30
3222 17740 3.462678 GTCTCCGCCCAGGACCTC 61.463 72.222 0.00 0.00 45.98 3.85
3228 17746 4.135153 CTGTCCGTCTCCGCCCAG 62.135 72.222 0.00 0.00 0.00 4.45
3233 17751 4.436998 GGTGCCTGTCCGTCTCCG 62.437 72.222 0.00 0.00 0.00 4.63
3234 17752 4.083862 GGGTGCCTGTCCGTCTCC 62.084 72.222 0.00 0.00 0.00 3.71
3235 17753 4.436998 CGGGTGCCTGTCCGTCTC 62.437 72.222 0.00 0.00 41.23 3.36
3252 17770 2.815647 CAGTTTCTCGGCGAGGGC 60.816 66.667 33.93 23.28 38.90 5.19
3253 17771 2.815647 GCAGTTTCTCGGCGAGGG 60.816 66.667 33.93 19.60 0.00 4.30
3261 17779 2.789203 CTACCGCGCGCAGTTTCTC 61.789 63.158 32.61 0.00 0.00 2.87
3262 17780 2.809601 CTACCGCGCGCAGTTTCT 60.810 61.111 32.61 6.10 0.00 2.52
3263 17781 4.500568 GCTACCGCGCGCAGTTTC 62.501 66.667 32.61 16.53 0.00 2.78
3282 17800 4.681978 ACGCCCGTGACAAGCCTC 62.682 66.667 0.00 0.00 0.00 4.70
3297 17815 3.425713 AGCAATGGCACGCTCACG 61.426 61.111 7.40 0.00 44.61 4.35
3298 17816 2.177531 CAGCAATGGCACGCTCAC 59.822 61.111 10.12 0.00 44.61 3.51
3299 17817 2.281692 ACAGCAATGGCACGCTCA 60.282 55.556 10.12 0.00 44.61 4.26
3300 17818 2.482374 GACAGCAATGGCACGCTC 59.518 61.111 10.12 0.00 44.61 5.03
3301 17819 3.425713 CGACAGCAATGGCACGCT 61.426 61.111 7.40 7.40 44.61 5.07
3302 17820 3.254014 AACGACAGCAATGGCACGC 62.254 57.895 0.00 2.59 44.61 5.34
3303 17821 1.440850 CAACGACAGCAATGGCACG 60.441 57.895 0.00 0.00 44.61 5.34
3304 17822 0.385974 GACAACGACAGCAATGGCAC 60.386 55.000 0.00 0.00 44.61 5.01
3305 17823 1.840630 CGACAACGACAGCAATGGCA 61.841 55.000 0.00 0.00 41.85 4.92
3306 17824 1.154413 CGACAACGACAGCAATGGC 60.154 57.895 0.00 0.00 42.66 4.40
3307 17825 0.163788 GACGACAACGACAGCAATGG 59.836 55.000 0.00 0.00 42.66 3.16
3308 17826 0.179275 CGACGACAACGACAGCAATG 60.179 55.000 0.00 0.00 42.66 2.82
3309 17827 0.596600 ACGACGACAACGACAGCAAT 60.597 50.000 0.00 0.00 42.66 3.56
3310 17828 1.204228 GACGACGACAACGACAGCAA 61.204 55.000 0.00 0.00 42.66 3.91
3311 17829 1.656263 GACGACGACAACGACAGCA 60.656 57.895 0.00 0.00 42.66 4.41
3312 17830 2.694615 CGACGACGACAACGACAGC 61.695 63.158 0.00 0.00 42.66 4.40
3313 17831 1.319010 GACGACGACGACAACGACAG 61.319 60.000 15.32 0.00 42.66 3.51
3314 17832 1.368019 GACGACGACGACAACGACA 60.368 57.895 15.32 0.00 42.66 4.35
3315 17833 2.405212 CGACGACGACGACAACGAC 61.405 63.158 15.32 1.87 41.06 4.34
3316 17834 2.128017 CGACGACGACGACAACGA 60.128 61.111 15.32 0.00 41.06 3.85
3317 17835 2.405212 GACGACGACGACGACAACG 61.405 63.158 25.15 14.84 42.66 4.10
3318 17836 3.419800 GACGACGACGACGACAAC 58.580 61.111 25.15 10.08 42.66 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.