Multiple sequence alignment - TraesCS3A01G101900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G101900 chr3A 100.000 3109 0 0 1 3109 66066902 66070010 0.000000e+00 5742
1 TraesCS3A01G101900 chr3A 80.055 366 66 7 338 700 267070017 267070378 6.610000e-67 265
2 TraesCS3A01G101900 chr3A 78.670 361 67 10 344 700 606366212 606365858 6.710000e-57 231
3 TraesCS3A01G101900 chr3B 90.189 1478 88 25 720 2174 89165757 89167200 0.000000e+00 1873
4 TraesCS3A01G101900 chr3B 93.878 49 3 0 291 339 89164044 89164092 1.200000e-09 75
5 TraesCS3A01G101900 chr3D 89.513 1478 86 32 727 2174 56650753 56649315 0.000000e+00 1807
6 TraesCS3A01G101900 chr3D 95.349 946 41 3 2167 3109 560043097 560042152 0.000000e+00 1500
7 TraesCS3A01G101900 chr3D 94.720 947 46 4 2167 3109 124553132 124552186 0.000000e+00 1469
8 TraesCS3A01G101900 chr3D 79.778 361 62 11 344 699 170705857 170706211 5.150000e-63 252
9 TraesCS3A01G101900 chrUn 95.032 946 43 3 2167 3109 68578715 68577771 0.000000e+00 1483
10 TraesCS3A01G101900 chr1D 95.032 946 41 4 2167 3109 423000017 423000959 0.000000e+00 1482
11 TraesCS3A01G101900 chr1D 79.292 367 65 8 346 704 25806387 25806024 2.390000e-61 246
12 TraesCS3A01G101900 chr5D 94.842 950 45 4 2164 3109 41709816 41710765 0.000000e+00 1480
13 TraesCS3A01G101900 chr2D 94.926 946 44 4 2167 3109 19057279 19058223 0.000000e+00 1478
14 TraesCS3A01G101900 chr7D 94.921 945 45 3 2167 3109 596907335 596908278 0.000000e+00 1476
15 TraesCS3A01G101900 chr7D 79.888 358 62 8 354 704 543722527 543722173 1.430000e-63 254
16 TraesCS3A01G101900 chr7D 78.474 367 65 13 330 689 500782588 500782947 8.670000e-56 228
17 TraesCS3A01G101900 chr4D 94.609 946 48 3 2167 3109 471279931 471280876 0.000000e+00 1461
18 TraesCS3A01G101900 chr4D 94.609 946 47 4 2167 3109 506373290 506374234 0.000000e+00 1461
19 TraesCS3A01G101900 chr7A 79.508 366 62 12 343 701 5090632 5090991 6.660000e-62 248
20 TraesCS3A01G101900 chr5A 79.133 369 67 9 344 704 44932775 44932409 2.390000e-61 246
21 TraesCS3A01G101900 chr2B 78.510 349 65 8 343 686 12022222 12022565 1.450000e-53 220


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G101900 chr3A 66066902 66070010 3108 False 5742 5742 100.0000 1 3109 1 chr3A.!!$F1 3108
1 TraesCS3A01G101900 chr3B 89164044 89167200 3156 False 974 1873 92.0335 291 2174 2 chr3B.!!$F1 1883
2 TraesCS3A01G101900 chr3D 56649315 56650753 1438 True 1807 1807 89.5130 727 2174 1 chr3D.!!$R1 1447
3 TraesCS3A01G101900 chr3D 560042152 560043097 945 True 1500 1500 95.3490 2167 3109 1 chr3D.!!$R3 942
4 TraesCS3A01G101900 chr3D 124552186 124553132 946 True 1469 1469 94.7200 2167 3109 1 chr3D.!!$R2 942
5 TraesCS3A01G101900 chrUn 68577771 68578715 944 True 1483 1483 95.0320 2167 3109 1 chrUn.!!$R1 942
6 TraesCS3A01G101900 chr1D 423000017 423000959 942 False 1482 1482 95.0320 2167 3109 1 chr1D.!!$F1 942
7 TraesCS3A01G101900 chr5D 41709816 41710765 949 False 1480 1480 94.8420 2164 3109 1 chr5D.!!$F1 945
8 TraesCS3A01G101900 chr2D 19057279 19058223 944 False 1478 1478 94.9260 2167 3109 1 chr2D.!!$F1 942
9 TraesCS3A01G101900 chr7D 596907335 596908278 943 False 1476 1476 94.9210 2167 3109 1 chr7D.!!$F2 942
10 TraesCS3A01G101900 chr4D 471279931 471280876 945 False 1461 1461 94.6090 2167 3109 1 chr4D.!!$F1 942
11 TraesCS3A01G101900 chr4D 506373290 506374234 944 False 1461 1461 94.6090 2167 3109 1 chr4D.!!$F2 942

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 532 0.031314 AGTCGCATGCCTCACGATAG 59.969 55.0 13.15 0.0 38.22 2.08 F
716 1191 0.034059 GACATAGTGATGGGAGGCGG 59.966 60.0 0.00 0.0 37.39 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1548 2905 0.105593 CCGGAGATGGACACCTGATG 59.894 60.0 0.0 0.0 0.00 3.07 R
2249 3607 0.107410 TGCGTGGGCTATTTACCTGG 60.107 55.0 0.0 0.0 40.82 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.642908 AGAAAAAGGAAAATAAAAACAGGACG 57.357 30.769 0.00 0.00 0.00 4.79
35 36 8.471609 AGAAAAAGGAAAATAAAAACAGGACGA 58.528 29.630 0.00 0.00 0.00 4.20
36 37 9.089601 GAAAAAGGAAAATAAAAACAGGACGAA 57.910 29.630 0.00 0.00 0.00 3.85
37 38 9.438228 AAAAAGGAAAATAAAAACAGGACGAAA 57.562 25.926 0.00 0.00 0.00 3.46
38 39 9.438228 AAAAGGAAAATAAAAACAGGACGAAAA 57.562 25.926 0.00 0.00 0.00 2.29
39 40 9.438228 AAAGGAAAATAAAAACAGGACGAAAAA 57.562 25.926 0.00 0.00 0.00 1.94
40 41 8.415192 AGGAAAATAAAAACAGGACGAAAAAC 57.585 30.769 0.00 0.00 0.00 2.43
41 42 7.493320 AGGAAAATAAAAACAGGACGAAAAACC 59.507 33.333 0.00 0.00 0.00 3.27
42 43 7.278203 GGAAAATAAAAACAGGACGAAAAACCA 59.722 33.333 0.00 0.00 0.00 3.67
43 44 8.549338 AAAATAAAAACAGGACGAAAAACCAA 57.451 26.923 0.00 0.00 0.00 3.67
44 45 8.549338 AAATAAAAACAGGACGAAAAACCAAA 57.451 26.923 0.00 0.00 0.00 3.28
45 46 8.549338 AATAAAAACAGGACGAAAAACCAAAA 57.451 26.923 0.00 0.00 0.00 2.44
46 47 6.474819 AAAAACAGGACGAAAAACCAAAAG 57.525 33.333 0.00 0.00 0.00 2.27
47 48 5.394224 AAACAGGACGAAAAACCAAAAGA 57.606 34.783 0.00 0.00 0.00 2.52
48 49 5.394224 AACAGGACGAAAAACCAAAAGAA 57.606 34.783 0.00 0.00 0.00 2.52
49 50 4.740268 ACAGGACGAAAAACCAAAAGAAC 58.260 39.130 0.00 0.00 0.00 3.01
50 51 4.218852 ACAGGACGAAAAACCAAAAGAACA 59.781 37.500 0.00 0.00 0.00 3.18
51 52 5.164954 CAGGACGAAAAACCAAAAGAACAA 58.835 37.500 0.00 0.00 0.00 2.83
52 53 5.288472 CAGGACGAAAAACCAAAAGAACAAG 59.712 40.000 0.00 0.00 0.00 3.16
53 54 5.184287 AGGACGAAAAACCAAAAGAACAAGA 59.816 36.000 0.00 0.00 0.00 3.02
54 55 5.865013 GGACGAAAAACCAAAAGAACAAGAA 59.135 36.000 0.00 0.00 0.00 2.52
55 56 6.366604 GGACGAAAAACCAAAAGAACAAGAAA 59.633 34.615 0.00 0.00 0.00 2.52
56 57 7.095565 GGACGAAAAACCAAAAGAACAAGAAAA 60.096 33.333 0.00 0.00 0.00 2.29
57 58 8.144155 ACGAAAAACCAAAAGAACAAGAAAAA 57.856 26.923 0.00 0.00 0.00 1.94
58 59 8.065407 ACGAAAAACCAAAAGAACAAGAAAAAC 58.935 29.630 0.00 0.00 0.00 2.43
59 60 7.532546 CGAAAAACCAAAAGAACAAGAAAAACC 59.467 33.333 0.00 0.00 0.00 3.27
60 61 6.811253 AAACCAAAAGAACAAGAAAAACCC 57.189 33.333 0.00 0.00 0.00 4.11
61 62 4.500127 ACCAAAAGAACAAGAAAAACCCG 58.500 39.130 0.00 0.00 0.00 5.28
62 63 3.308595 CCAAAAGAACAAGAAAAACCCGC 59.691 43.478 0.00 0.00 0.00 6.13
63 64 4.180817 CAAAAGAACAAGAAAAACCCGCT 58.819 39.130 0.00 0.00 0.00 5.52
64 65 3.436700 AAGAACAAGAAAAACCCGCTG 57.563 42.857 0.00 0.00 0.00 5.18
65 66 1.681264 AGAACAAGAAAAACCCGCTGG 59.319 47.619 0.00 0.00 37.80 4.85
83 84 2.124411 TGGGAGAAACCAGTATAGGCC 58.876 52.381 0.00 0.00 41.20 5.19
84 85 1.070289 GGGAGAAACCAGTATAGGCCG 59.930 57.143 0.00 0.00 41.20 6.13
85 86 1.070289 GGAGAAACCAGTATAGGCCGG 59.930 57.143 0.00 0.00 38.79 6.13
86 87 1.761198 GAGAAACCAGTATAGGCCGGT 59.239 52.381 1.90 0.00 0.00 5.28
87 88 1.761198 AGAAACCAGTATAGGCCGGTC 59.239 52.381 0.00 0.00 0.00 4.79
88 89 0.835276 AAACCAGTATAGGCCGGTCC 59.165 55.000 0.08 4.26 0.00 4.46
89 90 1.397390 AACCAGTATAGGCCGGTCCG 61.397 60.000 0.08 3.60 40.77 4.79
90 91 1.831286 CCAGTATAGGCCGGTCCGT 60.831 63.158 11.06 1.83 40.77 4.69
91 92 0.538057 CCAGTATAGGCCGGTCCGTA 60.538 60.000 11.06 0.83 40.77 4.02
92 93 0.595095 CAGTATAGGCCGGTCCGTAC 59.405 60.000 11.06 12.75 40.77 3.67
93 94 0.183492 AGTATAGGCCGGTCCGTACA 59.817 55.000 22.36 8.84 40.77 2.90
94 95 0.595095 GTATAGGCCGGTCCGTACAG 59.405 60.000 11.06 0.00 40.77 2.74
95 96 0.473755 TATAGGCCGGTCCGTACAGA 59.526 55.000 11.06 0.00 40.77 3.41
96 97 0.822532 ATAGGCCGGTCCGTACAGAG 60.823 60.000 11.06 0.00 40.77 3.35
97 98 2.898920 TAGGCCGGTCCGTACAGAGG 62.899 65.000 11.06 0.00 40.77 3.69
98 99 2.753043 GCCGGTCCGTACAGAGGA 60.753 66.667 11.06 0.00 34.99 3.71
103 104 3.991999 TCCGTACAGAGGACGTGG 58.008 61.111 0.00 0.00 38.65 4.94
104 105 2.181021 CCGTACAGAGGACGTGGC 59.819 66.667 0.00 0.00 38.65 5.01
105 106 2.632544 CCGTACAGAGGACGTGGCA 61.633 63.158 0.00 0.00 38.65 4.92
106 107 1.443872 CGTACAGAGGACGTGGCAC 60.444 63.158 7.79 7.79 35.58 5.01
107 108 1.663739 GTACAGAGGACGTGGCACA 59.336 57.895 19.09 0.00 0.00 4.57
108 109 0.246635 GTACAGAGGACGTGGCACAT 59.753 55.000 19.09 0.54 44.52 3.21
116 117 4.033776 CGTGGCACATGGGGAGGT 62.034 66.667 19.09 0.00 44.52 3.85
117 118 2.665089 CGTGGCACATGGGGAGGTA 61.665 63.158 19.09 0.00 44.52 3.08
118 119 1.922821 GTGGCACATGGGGAGGTAT 59.077 57.895 13.86 0.00 44.52 2.73
119 120 0.466189 GTGGCACATGGGGAGGTATG 60.466 60.000 13.86 0.00 44.52 2.39
120 121 1.529244 GGCACATGGGGAGGTATGC 60.529 63.158 0.00 0.00 0.00 3.14
121 122 1.893808 GCACATGGGGAGGTATGCG 60.894 63.158 0.00 0.00 0.00 4.73
122 123 1.526887 CACATGGGGAGGTATGCGT 59.473 57.895 0.00 0.00 0.00 5.24
123 124 0.107214 CACATGGGGAGGTATGCGTT 60.107 55.000 0.00 0.00 0.00 4.84
124 125 0.107214 ACATGGGGAGGTATGCGTTG 60.107 55.000 0.00 0.00 0.00 4.10
125 126 0.819259 CATGGGGAGGTATGCGTTGG 60.819 60.000 0.00 0.00 0.00 3.77
126 127 1.994885 ATGGGGAGGTATGCGTTGGG 61.995 60.000 0.00 0.00 0.00 4.12
127 128 2.676265 GGGGAGGTATGCGTTGGGT 61.676 63.158 0.00 0.00 0.00 4.51
128 129 1.301954 GGGAGGTATGCGTTGGGTT 59.698 57.895 0.00 0.00 0.00 4.11
129 130 1.029947 GGGAGGTATGCGTTGGGTTG 61.030 60.000 0.00 0.00 0.00 3.77
130 131 1.654023 GGAGGTATGCGTTGGGTTGC 61.654 60.000 0.00 0.00 0.00 4.17
131 132 0.676782 GAGGTATGCGTTGGGTTGCT 60.677 55.000 0.00 0.00 0.00 3.91
132 133 0.616371 AGGTATGCGTTGGGTTGCTA 59.384 50.000 0.00 0.00 0.00 3.49
133 134 1.211949 AGGTATGCGTTGGGTTGCTAT 59.788 47.619 0.00 0.00 0.00 2.97
134 135 1.602377 GGTATGCGTTGGGTTGCTATC 59.398 52.381 0.00 0.00 0.00 2.08
135 136 1.602377 GTATGCGTTGGGTTGCTATCC 59.398 52.381 0.00 0.00 0.00 2.59
136 137 0.034574 ATGCGTTGGGTTGCTATCCA 60.035 50.000 0.00 0.00 0.00 3.41
137 138 0.676466 TGCGTTGGGTTGCTATCCAG 60.676 55.000 0.00 0.00 34.17 3.86
138 139 0.676782 GCGTTGGGTTGCTATCCAGT 60.677 55.000 0.00 0.00 34.17 4.00
139 140 1.086696 CGTTGGGTTGCTATCCAGTG 58.913 55.000 0.00 0.00 34.17 3.66
140 141 1.338674 CGTTGGGTTGCTATCCAGTGA 60.339 52.381 0.00 0.00 34.17 3.41
141 142 2.084546 GTTGGGTTGCTATCCAGTGAC 58.915 52.381 0.00 0.00 34.17 3.67
142 143 1.357137 TGGGTTGCTATCCAGTGACA 58.643 50.000 0.00 0.00 0.00 3.58
143 144 1.003118 TGGGTTGCTATCCAGTGACAC 59.997 52.381 0.00 0.00 0.00 3.67
144 145 1.003118 GGGTTGCTATCCAGTGACACA 59.997 52.381 8.59 0.00 0.00 3.72
145 146 2.356125 GGGTTGCTATCCAGTGACACAT 60.356 50.000 8.59 0.00 0.00 3.21
146 147 3.118408 GGGTTGCTATCCAGTGACACATA 60.118 47.826 8.59 0.00 0.00 2.29
147 148 3.871594 GGTTGCTATCCAGTGACACATAC 59.128 47.826 8.59 0.00 0.00 2.39
148 149 3.819564 TGCTATCCAGTGACACATACC 57.180 47.619 8.59 0.00 0.00 2.73
149 150 3.103742 TGCTATCCAGTGACACATACCA 58.896 45.455 8.59 0.00 0.00 3.25
150 151 3.711190 TGCTATCCAGTGACACATACCAT 59.289 43.478 8.59 0.00 0.00 3.55
151 152 4.898861 TGCTATCCAGTGACACATACCATA 59.101 41.667 8.59 0.00 0.00 2.74
152 153 5.543790 TGCTATCCAGTGACACATACCATAT 59.456 40.000 8.59 0.00 0.00 1.78
153 154 6.723977 TGCTATCCAGTGACACATACCATATA 59.276 38.462 8.59 0.00 0.00 0.86
154 155 7.093771 TGCTATCCAGTGACACATACCATATAG 60.094 40.741 8.59 6.17 0.00 1.31
155 156 6.611613 ATCCAGTGACACATACCATATAGG 57.388 41.667 8.59 0.00 45.67 2.57
156 157 5.711698 TCCAGTGACACATACCATATAGGA 58.288 41.667 8.59 0.00 41.22 2.94
157 158 6.140377 TCCAGTGACACATACCATATAGGAA 58.860 40.000 8.59 0.00 41.22 3.36
158 159 6.787458 TCCAGTGACACATACCATATAGGAAT 59.213 38.462 8.59 0.00 41.22 3.01
159 160 7.039011 TCCAGTGACACATACCATATAGGAATC 60.039 40.741 8.59 0.00 41.22 2.52
160 161 7.256296 CCAGTGACACATACCATATAGGAATCA 60.256 40.741 8.59 0.00 41.22 2.57
161 162 7.600375 CAGTGACACATACCATATAGGAATCAC 59.400 40.741 8.59 0.00 41.22 3.06
162 163 6.874134 GTGACACATACCATATAGGAATCACC 59.126 42.308 0.00 0.00 41.22 4.02
163 164 6.013725 TGACACATACCATATAGGAATCACCC 60.014 42.308 0.00 0.00 41.22 4.61
164 165 5.250774 ACACATACCATATAGGAATCACCCC 59.749 44.000 0.00 0.00 41.22 4.95
165 166 5.488919 CACATACCATATAGGAATCACCCCT 59.511 44.000 0.00 0.00 41.22 4.79
166 167 6.672218 CACATACCATATAGGAATCACCCCTA 59.328 42.308 0.00 0.00 41.22 3.53
167 168 7.348274 CACATACCATATAGGAATCACCCCTAT 59.652 40.741 0.00 0.00 45.96 2.57
169 170 9.094578 CATACCATATAGGAATCACCCCTATAG 57.905 40.741 12.66 0.00 46.54 1.31
170 171 5.905913 ACCATATAGGAATCACCCCTATAGC 59.094 44.000 12.66 0.00 46.54 2.97
171 172 5.011125 CCATATAGGAATCACCCCTATAGCG 59.989 48.000 12.66 7.71 46.54 4.26
172 173 0.977395 AGGAATCACCCCTATAGCGC 59.023 55.000 0.00 0.00 40.05 5.92
173 174 0.036294 GGAATCACCCCTATAGCGCC 60.036 60.000 2.29 0.00 0.00 6.53
174 175 0.389948 GAATCACCCCTATAGCGCCG 60.390 60.000 2.29 0.00 0.00 6.46
175 176 1.827399 AATCACCCCTATAGCGCCGG 61.827 60.000 2.29 0.00 0.00 6.13
176 177 3.231736 CACCCCTATAGCGCCGGT 61.232 66.667 2.29 0.00 0.00 5.28
177 178 2.445274 ACCCCTATAGCGCCGGTT 60.445 61.111 2.29 0.00 0.00 4.44
178 179 2.030562 CCCCTATAGCGCCGGTTG 59.969 66.667 2.29 0.00 0.00 3.77
179 180 2.665185 CCCTATAGCGCCGGTTGC 60.665 66.667 2.29 12.25 0.00 4.17
180 181 2.108157 CCTATAGCGCCGGTTGCA 59.892 61.111 20.52 8.90 41.33 4.08
181 182 1.522806 CCTATAGCGCCGGTTGCAA 60.523 57.895 20.52 0.00 41.33 4.08
182 183 1.092921 CCTATAGCGCCGGTTGCAAA 61.093 55.000 20.52 10.14 41.33 3.68
200 201 2.746277 CCACTAGTGGTTGCGGCC 60.746 66.667 30.57 0.00 45.53 6.13
201 202 2.347490 CACTAGTGGTTGCGGCCT 59.653 61.111 15.49 0.00 0.00 5.19
202 203 2.034879 CACTAGTGGTTGCGGCCTG 61.035 63.158 15.49 0.00 0.00 4.85
203 204 3.127533 CTAGTGGTTGCGGCCTGC 61.128 66.667 11.92 11.92 46.70 4.85
204 205 4.715523 TAGTGGTTGCGGCCTGCC 62.716 66.667 15.40 0.00 45.60 4.85
207 208 4.992740 TGGTTGCGGCCTGCCAAT 62.993 61.111 15.40 0.00 45.60 3.16
208 209 4.440127 GGTTGCGGCCTGCCAATG 62.440 66.667 15.40 0.00 45.60 2.82
220 221 3.602103 CCAATGCGGGCTGCTTAA 58.398 55.556 20.66 0.00 46.63 1.85
221 222 1.434696 CCAATGCGGGCTGCTTAAG 59.565 57.895 20.66 9.41 46.63 1.85
222 223 1.031571 CCAATGCGGGCTGCTTAAGA 61.032 55.000 20.66 0.00 46.63 2.10
223 224 0.379669 CAATGCGGGCTGCTTAAGAG 59.620 55.000 20.66 2.23 46.63 2.85
224 225 0.749454 AATGCGGGCTGCTTAAGAGG 60.749 55.000 20.66 0.00 46.63 3.69
225 226 1.626356 ATGCGGGCTGCTTAAGAGGA 61.626 55.000 20.66 0.00 46.63 3.71
226 227 1.078426 GCGGGCTGCTTAAGAGGAA 60.078 57.895 11.99 0.00 41.73 3.36
227 228 1.092345 GCGGGCTGCTTAAGAGGAAG 61.092 60.000 11.99 0.00 41.73 3.46
235 236 2.006169 GCTTAAGAGGAAGCTGAGTGC 58.994 52.381 6.67 0.00 46.85 4.40
246 247 2.813779 GCTGAGTGCTTATTTCACCG 57.186 50.000 0.00 0.00 38.95 4.94
247 248 1.398390 GCTGAGTGCTTATTTCACCGG 59.602 52.381 0.00 0.00 38.95 5.28
248 249 2.935238 GCTGAGTGCTTATTTCACCGGA 60.935 50.000 9.46 0.00 38.95 5.14
249 250 2.673368 CTGAGTGCTTATTTCACCGGAC 59.327 50.000 9.46 0.00 35.14 4.79
250 251 2.301870 TGAGTGCTTATTTCACCGGACT 59.698 45.455 9.46 0.00 35.14 3.85
251 252 3.244422 TGAGTGCTTATTTCACCGGACTT 60.244 43.478 9.46 0.00 35.14 3.01
252 253 3.074412 AGTGCTTATTTCACCGGACTTG 58.926 45.455 9.46 0.00 35.14 3.16
253 254 2.812011 GTGCTTATTTCACCGGACTTGT 59.188 45.455 9.46 0.00 0.00 3.16
254 255 3.998341 GTGCTTATTTCACCGGACTTGTA 59.002 43.478 9.46 0.00 0.00 2.41
255 256 4.453136 GTGCTTATTTCACCGGACTTGTAA 59.547 41.667 9.46 0.00 0.00 2.41
256 257 5.049267 GTGCTTATTTCACCGGACTTGTAAA 60.049 40.000 9.46 0.00 0.00 2.01
257 258 8.905956 AGTGCTTATTTCACCGGACTTGTAAAG 61.906 40.741 9.46 4.61 41.66 1.85
383 390 3.457625 CTCCCGGCCTCTGCATCAG 62.458 68.421 0.00 0.00 40.13 2.90
385 392 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
386 393 1.817099 CCGGCCTCTGCATCAGAAC 60.817 63.158 0.00 0.00 40.18 3.01
387 394 1.078918 CGGCCTCTGCATCAGAACA 60.079 57.895 0.00 0.00 40.18 3.18
388 395 0.674581 CGGCCTCTGCATCAGAACAA 60.675 55.000 0.00 0.00 40.18 2.83
389 396 1.760192 GGCCTCTGCATCAGAACAAT 58.240 50.000 0.00 0.00 40.18 2.71
390 397 1.404391 GGCCTCTGCATCAGAACAATG 59.596 52.381 0.00 0.00 40.18 2.82
431 471 9.801873 TTATTAAGAATACAAAATCCAGCAAGC 57.198 29.630 0.00 0.00 0.00 4.01
432 472 4.361451 AGAATACAAAATCCAGCAAGCG 57.639 40.909 0.00 0.00 0.00 4.68
433 473 4.009675 AGAATACAAAATCCAGCAAGCGA 58.990 39.130 0.00 0.00 0.00 4.93
434 474 4.458989 AGAATACAAAATCCAGCAAGCGAA 59.541 37.500 0.00 0.00 0.00 4.70
435 475 2.422276 ACAAAATCCAGCAAGCGAAC 57.578 45.000 0.00 0.00 0.00 3.95
438 478 2.422276 AAATCCAGCAAGCGAACAAC 57.578 45.000 0.00 0.00 0.00 3.32
439 479 1.317613 AATCCAGCAAGCGAACAACA 58.682 45.000 0.00 0.00 0.00 3.33
442 482 1.001487 TCCAGCAAGCGAACAACATTG 60.001 47.619 0.00 0.00 0.00 2.82
443 483 1.001487 CCAGCAAGCGAACAACATTGA 60.001 47.619 0.00 0.00 0.00 2.57
444 484 2.543445 CCAGCAAGCGAACAACATTGAA 60.543 45.455 0.00 0.00 0.00 2.69
445 485 2.468777 CAGCAAGCGAACAACATTGAAC 59.531 45.455 0.00 0.00 0.00 3.18
446 486 1.786579 GCAAGCGAACAACATTGAACC 59.213 47.619 0.00 0.00 0.00 3.62
447 487 2.043411 CAAGCGAACAACATTGAACCG 58.957 47.619 0.00 0.48 0.00 4.44
449 489 0.589223 GCGAACAACATTGAACCGGA 59.411 50.000 9.46 0.00 0.00 5.14
450 490 1.002251 GCGAACAACATTGAACCGGAA 60.002 47.619 9.46 0.00 0.00 4.30
451 491 2.541999 GCGAACAACATTGAACCGGAAA 60.542 45.455 9.46 0.00 0.00 3.13
452 492 3.855524 GCGAACAACATTGAACCGGAAAT 60.856 43.478 9.46 1.70 0.00 2.17
453 493 4.614078 GCGAACAACATTGAACCGGAAATA 60.614 41.667 9.46 0.00 0.00 1.40
454 494 5.453648 CGAACAACATTGAACCGGAAATAA 58.546 37.500 9.46 0.00 0.00 1.40
455 495 5.915758 CGAACAACATTGAACCGGAAATAAA 59.084 36.000 9.46 0.00 0.00 1.40
456 496 6.087555 CGAACAACATTGAACCGGAAATAAAG 59.912 38.462 9.46 0.00 0.00 1.85
458 498 4.091453 ACATTGAACCGGAAATAAAGCG 57.909 40.909 9.46 0.00 0.00 4.68
465 505 5.008811 TGAACCGGAAATAAAGCGAAAAGAA 59.991 36.000 9.46 0.00 0.00 2.52
466 506 5.441709 ACCGGAAATAAAGCGAAAAGAAA 57.558 34.783 9.46 0.00 0.00 2.52
467 507 5.834169 ACCGGAAATAAAGCGAAAAGAAAA 58.166 33.333 9.46 0.00 0.00 2.29
469 509 6.584942 ACCGGAAATAAAGCGAAAAGAAAATC 59.415 34.615 9.46 0.00 0.00 2.17
470 510 6.034577 CCGGAAATAAAGCGAAAAGAAAATCC 59.965 38.462 0.00 0.00 0.00 3.01
471 511 6.237201 CGGAAATAAAGCGAAAAGAAAATCCG 60.237 38.462 0.00 0.00 37.79 4.18
472 512 6.804783 GGAAATAAAGCGAAAAGAAAATCCGA 59.195 34.615 0.00 0.00 0.00 4.55
473 513 7.327518 GGAAATAAAGCGAAAAGAAAATCCGAA 59.672 33.333 0.00 0.00 0.00 4.30
474 514 7.796958 AATAAAGCGAAAAGAAAATCCGAAG 57.203 32.000 0.00 0.00 0.00 3.79
475 515 4.830826 AAGCGAAAAGAAAATCCGAAGT 57.169 36.364 0.00 0.00 0.00 3.01
476 516 4.406001 AGCGAAAAGAAAATCCGAAGTC 57.594 40.909 0.00 0.00 0.00 3.01
477 517 3.120649 AGCGAAAAGAAAATCCGAAGTCG 60.121 43.478 0.00 0.00 39.44 4.18
479 519 3.363575 CGAAAAGAAAATCCGAAGTCGCA 60.364 43.478 0.00 0.00 38.18 5.10
480 520 4.669197 CGAAAAGAAAATCCGAAGTCGCAT 60.669 41.667 0.00 0.00 38.18 4.73
482 522 1.398390 AGAAAATCCGAAGTCGCATGC 59.602 47.619 7.91 7.91 38.18 4.06
483 523 0.451783 AAAATCCGAAGTCGCATGCC 59.548 50.000 13.15 0.00 38.18 4.40
484 524 0.392998 AAATCCGAAGTCGCATGCCT 60.393 50.000 13.15 0.55 38.18 4.75
485 525 0.811616 AATCCGAAGTCGCATGCCTC 60.812 55.000 13.15 5.34 38.18 4.70
486 526 1.960040 ATCCGAAGTCGCATGCCTCA 61.960 55.000 13.15 0.00 38.18 3.86
487 527 2.456119 CCGAAGTCGCATGCCTCAC 61.456 63.158 13.15 6.54 38.18 3.51
488 528 2.792290 CGAAGTCGCATGCCTCACG 61.792 63.158 13.15 9.98 0.00 4.35
489 529 1.446099 GAAGTCGCATGCCTCACGA 60.446 57.895 13.15 0.00 0.00 4.35
490 530 0.807667 GAAGTCGCATGCCTCACGAT 60.808 55.000 13.15 1.48 38.22 3.73
491 531 0.459899 AAGTCGCATGCCTCACGATA 59.540 50.000 13.15 0.00 38.22 2.92
492 532 0.031314 AGTCGCATGCCTCACGATAG 59.969 55.000 13.15 0.00 38.22 2.08
518 558 9.465985 GTGACTGCTCTAAATAACTACTAATCC 57.534 37.037 0.00 0.00 0.00 3.01
533 573 8.743085 ACTACTAATCCTATGTTACAAGACGA 57.257 34.615 0.00 0.00 0.00 4.20
535 575 7.876936 ACTAATCCTATGTTACAAGACGAGA 57.123 36.000 0.00 0.00 0.00 4.04
536 576 7.932335 ACTAATCCTATGTTACAAGACGAGAG 58.068 38.462 0.00 0.00 0.00 3.20
537 577 4.634184 TCCTATGTTACAAGACGAGAGC 57.366 45.455 0.00 0.00 0.00 4.09
538 578 4.014406 TCCTATGTTACAAGACGAGAGCA 58.986 43.478 0.00 0.00 0.00 4.26
549 589 6.564328 ACAAGACGAGAGCAAAAAGAAAAAT 58.436 32.000 0.00 0.00 0.00 1.82
550 590 6.473455 ACAAGACGAGAGCAAAAAGAAAAATG 59.527 34.615 0.00 0.00 0.00 2.32
551 591 4.978580 AGACGAGAGCAAAAAGAAAAATGC 59.021 37.500 0.00 0.00 39.06 3.56
552 592 4.681744 ACGAGAGCAAAAAGAAAAATGCA 58.318 34.783 0.00 0.00 41.18 3.96
553 593 4.504097 ACGAGAGCAAAAAGAAAAATGCAC 59.496 37.500 0.00 0.00 41.18 4.57
554 594 4.503734 CGAGAGCAAAAAGAAAAATGCACA 59.496 37.500 0.00 0.00 41.18 4.57
555 595 5.005586 CGAGAGCAAAAAGAAAAATGCACAA 59.994 36.000 0.00 0.00 41.18 3.33
556 596 6.110543 AGAGCAAAAAGAAAAATGCACAAC 57.889 33.333 0.00 0.00 41.18 3.32
557 597 5.876460 AGAGCAAAAAGAAAAATGCACAACT 59.124 32.000 0.00 0.00 41.18 3.16
558 598 6.036408 AGAGCAAAAAGAAAAATGCACAACTC 59.964 34.615 0.00 0.00 41.18 3.01
559 599 4.957372 GCAAAAAGAAAAATGCACAACTCG 59.043 37.500 0.00 0.00 38.63 4.18
560 600 5.445806 GCAAAAAGAAAAATGCACAACTCGT 60.446 36.000 0.00 0.00 38.63 4.18
563 603 4.749245 AGAAAAATGCACAACTCGTAGG 57.251 40.909 0.00 0.00 0.00 3.18
564 604 2.989422 AAAATGCACAACTCGTAGGC 57.011 45.000 0.00 0.00 0.00 3.93
566 606 3.328382 AAATGCACAACTCGTAGGCTA 57.672 42.857 0.00 0.00 0.00 3.93
568 608 0.963225 TGCACAACTCGTAGGCTACA 59.037 50.000 23.46 10.38 0.00 2.74
569 609 1.336517 TGCACAACTCGTAGGCTACAC 60.337 52.381 23.46 1.09 0.00 2.90
571 611 2.609737 GCACAACTCGTAGGCTACACTT 60.610 50.000 23.46 8.73 0.00 3.16
572 612 3.650139 CACAACTCGTAGGCTACACTTT 58.350 45.455 23.46 10.08 0.00 2.66
574 614 5.224888 CACAACTCGTAGGCTACACTTTTA 58.775 41.667 23.46 1.84 0.00 1.52
575 615 5.693104 CACAACTCGTAGGCTACACTTTTAA 59.307 40.000 23.46 0.27 0.00 1.52
577 617 5.972107 ACTCGTAGGCTACACTTTTAAGA 57.028 39.130 23.46 9.46 0.00 2.10
578 618 6.336842 ACTCGTAGGCTACACTTTTAAGAA 57.663 37.500 23.46 0.00 0.00 2.52
579 619 6.388278 ACTCGTAGGCTACACTTTTAAGAAG 58.612 40.000 23.46 3.77 0.00 2.85
580 620 5.717119 TCGTAGGCTACACTTTTAAGAAGG 58.283 41.667 23.46 3.58 0.00 3.46
581 621 5.477984 TCGTAGGCTACACTTTTAAGAAGGA 59.522 40.000 23.46 5.82 0.00 3.36
582 622 6.015180 TCGTAGGCTACACTTTTAAGAAGGAA 60.015 38.462 23.46 0.00 0.00 3.36
583 623 6.817140 CGTAGGCTACACTTTTAAGAAGGAAT 59.183 38.462 23.46 0.00 0.00 3.01
584 624 7.010275 CGTAGGCTACACTTTTAAGAAGGAATC 59.990 40.741 23.46 0.00 0.00 2.52
585 625 5.875359 AGGCTACACTTTTAAGAAGGAATCG 59.125 40.000 0.00 0.00 0.00 3.34
586 626 5.642491 GGCTACACTTTTAAGAAGGAATCGT 59.358 40.000 0.00 0.00 0.00 3.73
588 628 5.840940 ACACTTTTAAGAAGGAATCGTCG 57.159 39.130 0.00 0.00 0.00 5.12
590 630 3.367025 ACTTTTAAGAAGGAATCGTCGCG 59.633 43.478 0.00 0.00 0.00 5.87
591 631 1.274596 TTAAGAAGGAATCGTCGCGC 58.725 50.000 0.00 0.00 0.00 6.86
593 633 2.814183 AAGAAGGAATCGTCGCGCGT 62.814 55.000 30.98 10.20 42.13 6.01
594 634 3.126722 GAAGGAATCGTCGCGCGTG 62.127 63.158 30.98 22.93 42.13 5.34
597 637 3.913573 GAATCGTCGCGCGTGCAT 61.914 61.111 30.98 16.37 42.97 3.96
598 638 3.420222 GAATCGTCGCGCGTGCATT 62.420 57.895 30.98 23.33 42.97 3.56
599 639 3.700731 AATCGTCGCGCGTGCATTG 62.701 57.895 30.98 13.78 42.97 2.82
605 1080 2.001880 CGCGCGTGCATTGATGATG 61.002 57.895 24.19 0.00 42.97 3.07
608 1083 0.652465 CGCGTGCATTGATGATGACG 60.652 55.000 0.00 0.00 39.78 4.35
610 1085 1.332640 GCGTGCATTGATGATGACGAG 60.333 52.381 12.04 0.00 39.47 4.18
612 1087 2.034254 CGTGCATTGATGATGACGAGTC 60.034 50.000 0.00 0.00 39.47 3.36
616 1091 3.242543 GCATTGATGATGACGAGTCCAAC 60.243 47.826 0.34 0.00 38.03 3.77
619 1094 3.524541 TGATGATGACGAGTCCAACATG 58.475 45.455 0.34 0.00 0.00 3.21
621 1096 3.236632 TGATGACGAGTCCAACATGAG 57.763 47.619 0.00 0.00 0.00 2.90
622 1097 2.094026 TGATGACGAGTCCAACATGAGG 60.094 50.000 0.00 0.41 0.00 3.86
634 1109 3.485463 AACATGAGGTTGAACTTCGGA 57.515 42.857 0.00 0.00 38.60 4.55
635 1110 3.703001 ACATGAGGTTGAACTTCGGAT 57.297 42.857 0.00 0.00 0.00 4.18
636 1111 4.021102 ACATGAGGTTGAACTTCGGATT 57.979 40.909 0.00 0.00 0.00 3.01
637 1112 4.003648 ACATGAGGTTGAACTTCGGATTC 58.996 43.478 0.00 0.00 0.00 2.52
638 1113 4.256920 CATGAGGTTGAACTTCGGATTCT 58.743 43.478 2.97 0.00 0.00 2.40
642 1117 4.508662 AGGTTGAACTTCGGATTCTCATC 58.491 43.478 0.00 0.00 0.00 2.92
643 1118 3.623510 GGTTGAACTTCGGATTCTCATCC 59.376 47.826 0.00 0.00 45.40 3.51
645 1120 2.170607 TGAACTTCGGATTCTCATCCCC 59.829 50.000 0.00 0.00 46.06 4.81
646 1121 1.879575 ACTTCGGATTCTCATCCCCA 58.120 50.000 0.00 0.00 46.06 4.96
649 1124 2.710096 TCGGATTCTCATCCCCAAAC 57.290 50.000 0.00 0.00 46.06 2.93
650 1125 1.211949 TCGGATTCTCATCCCCAAACC 59.788 52.381 0.00 0.00 46.06 3.27
651 1126 1.064758 CGGATTCTCATCCCCAAACCA 60.065 52.381 0.00 0.00 46.06 3.67
652 1127 2.620367 CGGATTCTCATCCCCAAACCAA 60.620 50.000 0.00 0.00 46.06 3.67
653 1128 3.440127 GGATTCTCATCCCCAAACCAAA 58.560 45.455 0.00 0.00 43.29 3.28
657 1132 3.496331 TCTCATCCCCAAACCAAACTTC 58.504 45.455 0.00 0.00 0.00 3.01
658 1133 3.117322 TCTCATCCCCAAACCAAACTTCA 60.117 43.478 0.00 0.00 0.00 3.02
660 1135 4.230455 TCATCCCCAAACCAAACTTCAAT 58.770 39.130 0.00 0.00 0.00 2.57
661 1136 4.283212 TCATCCCCAAACCAAACTTCAATC 59.717 41.667 0.00 0.00 0.00 2.67
662 1137 2.969262 TCCCCAAACCAAACTTCAATCC 59.031 45.455 0.00 0.00 0.00 3.01
663 1138 2.703007 CCCCAAACCAAACTTCAATCCA 59.297 45.455 0.00 0.00 0.00 3.41
666 1141 4.040217 CCCAAACCAAACTTCAATCCATCA 59.960 41.667 0.00 0.00 0.00 3.07
668 1143 4.503741 AACCAAACTTCAATCCATCACG 57.496 40.909 0.00 0.00 0.00 4.35
671 1146 4.023193 ACCAAACTTCAATCCATCACGTTC 60.023 41.667 0.00 0.00 0.00 3.95
673 1148 5.149273 CAAACTTCAATCCATCACGTTCAG 58.851 41.667 0.00 0.00 0.00 3.02
674 1149 2.744202 ACTTCAATCCATCACGTTCAGC 59.256 45.455 0.00 0.00 0.00 4.26
676 1151 2.777094 TCAATCCATCACGTTCAGCAA 58.223 42.857 0.00 0.00 0.00 3.91
677 1152 2.743664 TCAATCCATCACGTTCAGCAAG 59.256 45.455 0.00 0.00 0.00 4.01
678 1153 1.742761 ATCCATCACGTTCAGCAAGG 58.257 50.000 0.00 0.00 0.00 3.61
679 1154 0.684535 TCCATCACGTTCAGCAAGGA 59.315 50.000 0.00 0.00 0.00 3.36
680 1155 0.798776 CCATCACGTTCAGCAAGGAC 59.201 55.000 0.00 0.00 0.00 3.85
682 1157 1.195448 CATCACGTTCAGCAAGGACAC 59.805 52.381 0.00 0.00 0.00 3.67
683 1158 0.874175 TCACGTTCAGCAAGGACACG 60.874 55.000 0.00 0.00 36.91 4.49
685 1160 0.874607 ACGTTCAGCAAGGACACGAC 60.875 55.000 0.00 0.00 34.90 4.34
686 1161 0.874175 CGTTCAGCAAGGACACGACA 60.874 55.000 0.00 0.00 32.51 4.35
687 1162 0.582005 GTTCAGCAAGGACACGACAC 59.418 55.000 0.00 0.00 0.00 3.67
691 1166 1.014352 AGCAAGGACACGACACAAAC 58.986 50.000 0.00 0.00 0.00 2.93
692 1167 0.315869 GCAAGGACACGACACAAACG 60.316 55.000 0.00 0.00 0.00 3.60
693 1168 0.315869 CAAGGACACGACACAAACGC 60.316 55.000 0.00 0.00 0.00 4.84
694 1169 1.758319 AAGGACACGACACAAACGCG 61.758 55.000 3.53 3.53 0.00 6.01
696 1171 1.084478 GACACGACACAAACGCGTC 60.084 57.895 14.44 0.00 35.90 5.19
702 1177 1.054574 GACACAAACGCGTCGACATA 58.945 50.000 14.44 0.00 0.00 2.29
703 1178 1.057285 GACACAAACGCGTCGACATAG 59.943 52.381 14.44 8.32 0.00 2.23
705 1180 1.057636 ACAAACGCGTCGACATAGTG 58.942 50.000 14.44 8.60 0.00 2.74
708 1183 1.545759 AACGCGTCGACATAGTGATG 58.454 50.000 14.44 0.00 39.16 3.07
709 1184 0.248498 ACGCGTCGACATAGTGATGG 60.248 55.000 17.16 0.00 37.39 3.51
710 1185 0.934901 CGCGTCGACATAGTGATGGG 60.935 60.000 17.16 0.90 37.39 4.00
712 1187 1.600663 GCGTCGACATAGTGATGGGAG 60.601 57.143 17.16 0.00 37.39 4.30
713 1188 1.001268 CGTCGACATAGTGATGGGAGG 60.001 57.143 17.16 0.00 37.39 4.30
714 1189 1.040646 TCGACATAGTGATGGGAGGC 58.959 55.000 0.00 0.00 37.39 4.70
715 1190 0.319040 CGACATAGTGATGGGAGGCG 60.319 60.000 0.00 0.00 37.39 5.52
716 1191 0.034059 GACATAGTGATGGGAGGCGG 59.966 60.000 0.00 0.00 37.39 6.13
718 1193 2.520536 ATAGTGATGGGAGGCGGCC 61.521 63.158 12.11 12.11 0.00 6.13
739 2048 4.096682 GCCGACTGATGACTAGTAAGACTT 59.903 45.833 0.00 0.00 0.00 3.01
779 2088 2.880890 GGAATGTCCCAATCTTCCATCG 59.119 50.000 0.00 0.00 37.65 3.84
783 2092 4.336889 TGTCCCAATCTTCCATCGTATC 57.663 45.455 0.00 0.00 0.00 2.24
785 2094 4.163268 TGTCCCAATCTTCCATCGTATCAA 59.837 41.667 0.00 0.00 0.00 2.57
786 2095 4.511826 GTCCCAATCTTCCATCGTATCAAC 59.488 45.833 0.00 0.00 0.00 3.18
787 2096 4.408921 TCCCAATCTTCCATCGTATCAACT 59.591 41.667 0.00 0.00 0.00 3.16
788 2097 5.600898 TCCCAATCTTCCATCGTATCAACTA 59.399 40.000 0.00 0.00 0.00 2.24
789 2098 6.270000 TCCCAATCTTCCATCGTATCAACTAT 59.730 38.462 0.00 0.00 0.00 2.12
790 2099 6.591834 CCCAATCTTCCATCGTATCAACTATC 59.408 42.308 0.00 0.00 0.00 2.08
791 2100 7.154656 CCAATCTTCCATCGTATCAACTATCA 58.845 38.462 0.00 0.00 0.00 2.15
792 2101 7.657354 CCAATCTTCCATCGTATCAACTATCAA 59.343 37.037 0.00 0.00 0.00 2.57
793 2102 8.706936 CAATCTTCCATCGTATCAACTATCAAG 58.293 37.037 0.00 0.00 0.00 3.02
794 2103 7.348080 TCTTCCATCGTATCAACTATCAAGT 57.652 36.000 0.00 0.00 37.65 3.16
795 2104 8.459911 TCTTCCATCGTATCAACTATCAAGTA 57.540 34.615 0.00 0.00 33.75 2.24
796 2105 8.350722 TCTTCCATCGTATCAACTATCAAGTAC 58.649 37.037 0.00 0.00 33.75 2.73
797 2106 6.665465 TCCATCGTATCAACTATCAAGTACG 58.335 40.000 0.00 0.00 36.00 3.67
798 2107 6.261603 TCCATCGTATCAACTATCAAGTACGT 59.738 38.462 0.00 0.00 36.08 3.57
799 2108 7.442062 TCCATCGTATCAACTATCAAGTACGTA 59.558 37.037 0.00 0.00 36.08 3.57
800 2109 7.533222 CCATCGTATCAACTATCAAGTACGTAC 59.467 40.741 18.10 18.10 36.08 3.67
820 2129 6.645415 ACGTACTACAAGAGAATGTGAAAAGG 59.355 38.462 0.00 0.00 34.75 3.11
823 2132 6.234177 ACTACAAGAGAATGTGAAAAGGAGG 58.766 40.000 0.00 0.00 34.75 4.30
824 2133 5.310409 ACAAGAGAATGTGAAAAGGAGGA 57.690 39.130 0.00 0.00 30.82 3.71
825 2134 5.066593 ACAAGAGAATGTGAAAAGGAGGAC 58.933 41.667 0.00 0.00 30.82 3.85
826 2135 5.163152 ACAAGAGAATGTGAAAAGGAGGACT 60.163 40.000 0.00 0.00 30.82 3.85
827 2136 6.043243 ACAAGAGAATGTGAAAAGGAGGACTA 59.957 38.462 0.00 0.00 30.82 2.59
828 2137 6.688073 AGAGAATGTGAAAAGGAGGACTAA 57.312 37.500 0.00 0.00 0.00 2.24
847 2162 9.638176 AGGACTAAAATGCATCAGATATTTCTT 57.362 29.630 0.00 0.00 0.00 2.52
848 2163 9.674824 GGACTAAAATGCATCAGATATTTCTTG 57.325 33.333 0.00 0.00 0.00 3.02
855 2170 5.824624 TGCATCAGATATTTCTTGGAGAACC 59.175 40.000 0.00 0.00 33.26 3.62
859 2174 4.034510 CAGATATTTCTTGGAGAACCACGC 59.965 45.833 0.00 0.00 46.80 5.34
924 2239 1.620323 ACCGGTAACTACCACAACTCC 59.380 52.381 4.49 0.00 46.80 3.85
925 2240 1.619827 CCGGTAACTACCACAACTCCA 59.380 52.381 6.71 0.00 46.80 3.86
938 2260 4.454504 CCACAACTCCAGGTTAACATACAC 59.545 45.833 8.10 0.00 36.23 2.90
941 2263 4.451629 ACTCCAGGTTAACATACACGAG 57.548 45.455 8.10 6.18 0.00 4.18
975 2297 1.360551 CGTGGGATCGGCAGAGTAG 59.639 63.158 0.00 0.00 0.00 2.57
976 2298 1.068250 GTGGGATCGGCAGAGTAGC 59.932 63.158 0.00 0.00 0.00 3.58
1081 2408 4.008933 AGGCCACGAGGTGCTGTC 62.009 66.667 5.01 0.00 37.19 3.51
1167 2497 2.184579 GAGTACCCGGTGCTGCTC 59.815 66.667 13.56 5.37 0.00 4.26
1171 2501 2.656069 TACCCGGTGCTGCTCTTCC 61.656 63.158 0.00 0.00 0.00 3.46
1246 2576 0.877649 CTCCCATGGCTTCATCGTCG 60.878 60.000 6.09 0.00 0.00 5.12
1250 2580 1.226974 ATGGCTTCATCGTCGTCGG 60.227 57.895 1.55 0.00 37.69 4.79
1262 2592 0.662085 GTCGTCGGTCCTCAGGTATC 59.338 60.000 0.00 0.00 0.00 2.24
1269 2602 5.064962 CGTCGGTCCTCAGGTATCTTATATC 59.935 48.000 0.00 0.00 0.00 1.63
1279 2612 7.658261 TCAGGTATCTTATATCAACAAGGTCG 58.342 38.462 0.00 0.00 0.00 4.79
1297 2630 1.348594 GTCAAGCTAATGTCGGCGC 59.651 57.895 0.00 0.00 0.00 6.53
1307 2643 3.876198 GTCGGCGCGGCAATGAAT 61.876 61.111 32.60 0.00 0.00 2.57
1312 2648 1.141591 GGCGCGGCAATGAATTTCTG 61.142 55.000 29.32 0.00 0.00 3.02
1421 2761 2.492090 GTCATCGACTGGCTCGCT 59.508 61.111 0.00 0.00 42.62 4.93
1423 2763 2.182791 CATCGACTGGCTCGCTGT 59.817 61.111 0.00 0.00 42.62 4.40
1506 2857 6.483640 ACCATCGATTGCTCTCTAATTTAACC 59.516 38.462 0.00 0.00 0.00 2.85
1546 2903 9.346005 TCAAGATACTAACAATTGCATCATCAT 57.654 29.630 5.05 0.00 0.00 2.45
1547 2904 9.961265 CAAGATACTAACAATTGCATCATCATT 57.039 29.630 5.05 0.00 0.00 2.57
2009 3366 1.875963 CATGGTGGCGTTCCTCAAC 59.124 57.895 0.00 0.00 0.00 3.18
2056 3413 2.281345 GGATGCCATGAGGGAGCG 60.281 66.667 0.00 0.00 43.36 5.03
2060 3417 2.892425 GCCATGAGGGAGCGAACG 60.892 66.667 0.00 0.00 40.01 3.95
2062 3419 2.721167 CCATGAGGGAGCGAACGGA 61.721 63.158 0.00 0.00 40.01 4.69
2063 3420 1.443407 CATGAGGGAGCGAACGGAT 59.557 57.895 0.00 0.00 0.00 4.18
2067 3424 1.945354 GAGGGAGCGAACGGATGTCA 61.945 60.000 0.00 0.00 0.00 3.58
2117 3474 2.029828 CCGTGATGAGTAGCCAGGATAC 60.030 54.545 6.78 6.78 0.00 2.24
2147 3504 5.872070 CCTTGTCAGTCCTCATTAGAGTTTC 59.128 44.000 0.00 0.00 40.40 2.78
2161 3518 4.124851 AGAGTTTCAATCGATAGCGGTT 57.875 40.909 0.00 0.00 42.58 4.44
2198 3555 4.068599 TGCGACACATTTGAGGTGAATTA 58.931 39.130 0.00 0.00 39.53 1.40
2240 3597 1.779025 GCGAATGGCTGTGATGCGAT 61.779 55.000 0.00 0.00 39.11 4.58
2243 3600 2.481568 CGAATGGCTGTGATGCGATAAT 59.518 45.455 0.00 0.00 31.34 1.28
2249 3607 4.037690 GGCTGTGATGCGATAATTTTGAC 58.962 43.478 0.00 0.00 0.00 3.18
2270 3628 0.616371 AGGTAAATAGCCCACGCACA 59.384 50.000 0.00 0.00 37.52 4.57
2290 3648 5.347342 CACAACATGGCTGTTAAACTCAAA 58.653 37.500 0.00 0.00 43.76 2.69
2333 3691 0.331616 GGCTGGACCCACCACTTATT 59.668 55.000 0.00 0.00 44.64 1.40
2499 3857 1.681327 GTCTACCTCCTCCGCCACA 60.681 63.158 0.00 0.00 0.00 4.17
2502 3860 1.305802 TACCTCCTCCGCCACACAT 60.306 57.895 0.00 0.00 0.00 3.21
2504 3862 1.002134 CCTCCTCCGCCACACATTT 60.002 57.895 0.00 0.00 0.00 2.32
2506 3864 1.656652 CTCCTCCGCCACACATTTAG 58.343 55.000 0.00 0.00 0.00 1.85
2511 3869 3.270027 CTCCGCCACACATTTAGAATGA 58.730 45.455 7.59 0.00 0.00 2.57
2512 3870 3.879295 CTCCGCCACACATTTAGAATGAT 59.121 43.478 7.59 0.00 0.00 2.45
2526 3884 4.327982 AGAATGATGACAGTATGGACCG 57.672 45.455 0.00 0.00 43.62 4.79
2578 3936 0.392595 CCCAGACCCTCTTAAACGGC 60.393 60.000 0.00 0.00 0.00 5.68
2721 4079 5.182570 TGTCTTTTGCTCTGATTTCTCCATG 59.817 40.000 0.00 0.00 0.00 3.66
2733 4091 8.477256 TCTGATTTCTCCATGTTTTGTTTTTCT 58.523 29.630 0.00 0.00 0.00 2.52
2734 4092 8.647143 TGATTTCTCCATGTTTTGTTTTTCTC 57.353 30.769 0.00 0.00 0.00 2.87
2736 4094 6.790232 TTCTCCATGTTTTGTTTTTCTCCT 57.210 33.333 0.00 0.00 0.00 3.69
2737 4095 6.391227 TCTCCATGTTTTGTTTTTCTCCTC 57.609 37.500 0.00 0.00 0.00 3.71
2738 4096 5.008613 TCTCCATGTTTTGTTTTTCTCCTCG 59.991 40.000 0.00 0.00 0.00 4.63
2739 4097 4.884744 TCCATGTTTTGTTTTTCTCCTCGA 59.115 37.500 0.00 0.00 0.00 4.04
2744 4105 5.358442 TGTTTTGTTTTTCTCCTCGATTGGA 59.642 36.000 0.00 0.00 34.52 3.53
2745 4106 6.040391 TGTTTTGTTTTTCTCCTCGATTGGAT 59.960 34.615 0.00 0.00 35.30 3.41
2847 4209 2.673368 CAGTTTGAGGGCTACGTTGATC 59.327 50.000 0.00 0.00 0.00 2.92
2962 4324 4.361253 GCCGATGGCGATGTATGT 57.639 55.556 0.00 0.00 39.62 2.29
2994 4356 0.391661 ACTGCATGCGGAGTTCGAAT 60.392 50.000 32.80 4.73 41.76 3.34
3053 4415 3.690628 TGCAGATGATCGATTTGCAGAAA 59.309 39.130 17.92 2.88 44.95 2.52
3058 4420 5.413833 AGATGATCGATTTGCAGAAACAAGT 59.586 36.000 0.00 0.00 0.00 3.16
3063 4425 8.081633 TGATCGATTTGCAGAAACAAGTAAATT 58.918 29.630 0.00 0.00 31.65 1.82
3075 4438 4.415596 ACAAGTAAATTTCATGGCAGGGA 58.584 39.130 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 9.738832 CGTCCTGTTTTTATTTTCCTTTTTCTA 57.261 29.630 0.00 0.00 0.00 2.10
9 10 8.471609 TCGTCCTGTTTTTATTTTCCTTTTTCT 58.528 29.630 0.00 0.00 0.00 2.52
10 11 8.637281 TCGTCCTGTTTTTATTTTCCTTTTTC 57.363 30.769 0.00 0.00 0.00 2.29
11 12 9.438228 TTTCGTCCTGTTTTTATTTTCCTTTTT 57.562 25.926 0.00 0.00 0.00 1.94
12 13 9.438228 TTTTCGTCCTGTTTTTATTTTCCTTTT 57.562 25.926 0.00 0.00 0.00 2.27
13 14 9.438228 TTTTTCGTCCTGTTTTTATTTTCCTTT 57.562 25.926 0.00 0.00 0.00 3.11
14 15 8.875803 GTTTTTCGTCCTGTTTTTATTTTCCTT 58.124 29.630 0.00 0.00 0.00 3.36
15 16 7.493320 GGTTTTTCGTCCTGTTTTTATTTTCCT 59.507 33.333 0.00 0.00 0.00 3.36
16 17 7.278203 TGGTTTTTCGTCCTGTTTTTATTTTCC 59.722 33.333 0.00 0.00 0.00 3.13
17 18 8.187354 TGGTTTTTCGTCCTGTTTTTATTTTC 57.813 30.769 0.00 0.00 0.00 2.29
18 19 8.549338 TTGGTTTTTCGTCCTGTTTTTATTTT 57.451 26.923 0.00 0.00 0.00 1.82
19 20 8.549338 TTTGGTTTTTCGTCCTGTTTTTATTT 57.451 26.923 0.00 0.00 0.00 1.40
20 21 8.549338 TTTTGGTTTTTCGTCCTGTTTTTATT 57.451 26.923 0.00 0.00 0.00 1.40
21 22 8.035984 TCTTTTGGTTTTTCGTCCTGTTTTTAT 58.964 29.630 0.00 0.00 0.00 1.40
22 23 7.376615 TCTTTTGGTTTTTCGTCCTGTTTTTA 58.623 30.769 0.00 0.00 0.00 1.52
23 24 6.224584 TCTTTTGGTTTTTCGTCCTGTTTTT 58.775 32.000 0.00 0.00 0.00 1.94
24 25 5.785243 TCTTTTGGTTTTTCGTCCTGTTTT 58.215 33.333 0.00 0.00 0.00 2.43
25 26 5.394224 TCTTTTGGTTTTTCGTCCTGTTT 57.606 34.783 0.00 0.00 0.00 2.83
26 27 5.165676 GTTCTTTTGGTTTTTCGTCCTGTT 58.834 37.500 0.00 0.00 0.00 3.16
27 28 4.218852 TGTTCTTTTGGTTTTTCGTCCTGT 59.781 37.500 0.00 0.00 0.00 4.00
28 29 4.739195 TGTTCTTTTGGTTTTTCGTCCTG 58.261 39.130 0.00 0.00 0.00 3.86
29 30 5.184287 TCTTGTTCTTTTGGTTTTTCGTCCT 59.816 36.000 0.00 0.00 0.00 3.85
30 31 5.404096 TCTTGTTCTTTTGGTTTTTCGTCC 58.596 37.500 0.00 0.00 0.00 4.79
31 32 6.937886 TTCTTGTTCTTTTGGTTTTTCGTC 57.062 33.333 0.00 0.00 0.00 4.20
32 33 7.716768 TTTTCTTGTTCTTTTGGTTTTTCGT 57.283 28.000 0.00 0.00 0.00 3.85
33 34 7.532546 GGTTTTTCTTGTTCTTTTGGTTTTTCG 59.467 33.333 0.00 0.00 0.00 3.46
34 35 7.806014 GGGTTTTTCTTGTTCTTTTGGTTTTTC 59.194 33.333 0.00 0.00 0.00 2.29
35 36 7.520776 CGGGTTTTTCTTGTTCTTTTGGTTTTT 60.521 33.333 0.00 0.00 0.00 1.94
36 37 6.072948 CGGGTTTTTCTTGTTCTTTTGGTTTT 60.073 34.615 0.00 0.00 0.00 2.43
37 38 5.410132 CGGGTTTTTCTTGTTCTTTTGGTTT 59.590 36.000 0.00 0.00 0.00 3.27
38 39 4.932799 CGGGTTTTTCTTGTTCTTTTGGTT 59.067 37.500 0.00 0.00 0.00 3.67
39 40 4.500127 CGGGTTTTTCTTGTTCTTTTGGT 58.500 39.130 0.00 0.00 0.00 3.67
40 41 3.308595 GCGGGTTTTTCTTGTTCTTTTGG 59.691 43.478 0.00 0.00 0.00 3.28
41 42 4.032786 CAGCGGGTTTTTCTTGTTCTTTTG 59.967 41.667 0.00 0.00 0.00 2.44
42 43 4.180817 CAGCGGGTTTTTCTTGTTCTTTT 58.819 39.130 0.00 0.00 0.00 2.27
43 44 3.430236 CCAGCGGGTTTTTCTTGTTCTTT 60.430 43.478 0.00 0.00 0.00 2.52
44 45 2.100749 CCAGCGGGTTTTTCTTGTTCTT 59.899 45.455 0.00 0.00 0.00 2.52
45 46 1.681264 CCAGCGGGTTTTTCTTGTTCT 59.319 47.619 0.00 0.00 0.00 3.01
46 47 1.269569 CCCAGCGGGTTTTTCTTGTTC 60.270 52.381 1.11 0.00 38.25 3.18
47 48 0.750249 CCCAGCGGGTTTTTCTTGTT 59.250 50.000 1.11 0.00 38.25 2.83
48 49 0.106419 TCCCAGCGGGTTTTTCTTGT 60.106 50.000 12.46 0.00 44.74 3.16
49 50 0.598065 CTCCCAGCGGGTTTTTCTTG 59.402 55.000 12.46 0.00 44.74 3.02
50 51 0.476771 TCTCCCAGCGGGTTTTTCTT 59.523 50.000 12.46 0.00 44.74 2.52
51 52 0.476771 TTCTCCCAGCGGGTTTTTCT 59.523 50.000 12.46 0.00 44.74 2.52
52 53 1.000607 GTTTCTCCCAGCGGGTTTTTC 60.001 52.381 12.46 1.12 44.74 2.29
53 54 1.037493 GTTTCTCCCAGCGGGTTTTT 58.963 50.000 12.46 0.00 44.74 1.94
54 55 0.826256 GGTTTCTCCCAGCGGGTTTT 60.826 55.000 12.46 0.00 44.74 2.43
55 56 1.228459 GGTTTCTCCCAGCGGGTTT 60.228 57.895 12.46 0.00 44.74 3.27
56 57 2.411765 CTGGTTTCTCCCAGCGGGTT 62.412 60.000 12.46 0.00 45.19 4.11
57 58 2.852075 TGGTTTCTCCCAGCGGGT 60.852 61.111 12.46 0.00 44.74 5.28
58 59 2.045926 CTGGTTTCTCCCAGCGGG 60.046 66.667 7.24 7.24 45.19 6.13
63 64 2.124411 GGCCTATACTGGTTTCTCCCA 58.876 52.381 0.00 0.00 34.77 4.37
64 65 1.070289 CGGCCTATACTGGTTTCTCCC 59.930 57.143 0.00 0.00 34.77 4.30
65 66 1.070289 CCGGCCTATACTGGTTTCTCC 59.930 57.143 0.00 0.00 0.00 3.71
66 67 2.528041 CCGGCCTATACTGGTTTCTC 57.472 55.000 0.00 0.00 0.00 2.87
72 73 0.538057 TACGGACCGGCCTATACTGG 60.538 60.000 20.00 0.00 42.28 4.00
73 74 0.595095 GTACGGACCGGCCTATACTG 59.405 60.000 20.00 0.00 0.00 2.74
74 75 0.183492 TGTACGGACCGGCCTATACT 59.817 55.000 20.00 0.00 30.88 2.12
75 76 0.595095 CTGTACGGACCGGCCTATAC 59.405 60.000 20.00 11.45 0.00 1.47
76 77 0.473755 TCTGTACGGACCGGCCTATA 59.526 55.000 20.00 0.00 0.00 1.31
77 78 0.822532 CTCTGTACGGACCGGCCTAT 60.823 60.000 20.00 0.00 0.00 2.57
78 79 1.452651 CTCTGTACGGACCGGCCTA 60.453 63.158 20.00 0.00 0.00 3.93
79 80 2.754658 CTCTGTACGGACCGGCCT 60.755 66.667 20.00 0.00 0.00 5.19
80 81 3.834799 CCTCTGTACGGACCGGCC 61.835 72.222 20.00 8.50 0.00 6.13
81 82 2.753043 TCCTCTGTACGGACCGGC 60.753 66.667 20.00 11.22 0.00 6.13
82 83 2.758089 CGTCCTCTGTACGGACCGG 61.758 68.421 20.00 0.00 46.48 5.28
83 84 2.037136 ACGTCCTCTGTACGGACCG 61.037 63.158 13.61 13.61 46.48 4.79
84 85 1.505353 CACGTCCTCTGTACGGACC 59.495 63.158 11.47 0.00 46.48 4.46
85 86 1.505353 CCACGTCCTCTGTACGGAC 59.495 63.158 0.00 4.32 45.88 4.79
86 87 2.338015 GCCACGTCCTCTGTACGGA 61.338 63.158 3.91 3.91 44.48 4.69
87 88 2.181021 GCCACGTCCTCTGTACGG 59.819 66.667 0.00 0.00 44.48 4.02
88 89 1.443872 GTGCCACGTCCTCTGTACG 60.444 63.158 0.00 0.00 45.64 3.67
89 90 0.246635 ATGTGCCACGTCCTCTGTAC 59.753 55.000 0.00 0.00 0.00 2.90
90 91 0.246360 CATGTGCCACGTCCTCTGTA 59.754 55.000 0.00 0.00 0.00 2.74
91 92 1.004560 CATGTGCCACGTCCTCTGT 60.005 57.895 0.00 0.00 0.00 3.41
92 93 1.742880 CCATGTGCCACGTCCTCTG 60.743 63.158 0.00 0.00 0.00 3.35
93 94 2.665000 CCATGTGCCACGTCCTCT 59.335 61.111 0.00 0.00 0.00 3.69
94 95 2.436646 CCCATGTGCCACGTCCTC 60.437 66.667 0.00 0.00 0.00 3.71
95 96 4.033776 CCCCATGTGCCACGTCCT 62.034 66.667 0.00 0.00 0.00 3.85
96 97 3.976701 CTCCCCATGTGCCACGTCC 62.977 68.421 0.00 0.00 0.00 4.79
97 98 2.436646 CTCCCCATGTGCCACGTC 60.437 66.667 0.00 0.00 0.00 4.34
98 99 4.033776 CCTCCCCATGTGCCACGT 62.034 66.667 0.00 0.00 0.00 4.49
99 100 1.983119 ATACCTCCCCATGTGCCACG 61.983 60.000 0.00 0.00 0.00 4.94
100 101 0.466189 CATACCTCCCCATGTGCCAC 60.466 60.000 0.00 0.00 0.00 5.01
101 102 1.922057 CATACCTCCCCATGTGCCA 59.078 57.895 0.00 0.00 0.00 4.92
102 103 1.529244 GCATACCTCCCCATGTGCC 60.529 63.158 0.00 0.00 0.00 5.01
103 104 1.893808 CGCATACCTCCCCATGTGC 60.894 63.158 0.00 0.00 0.00 4.57
104 105 0.107214 AACGCATACCTCCCCATGTG 60.107 55.000 0.00 0.00 38.37 3.21
105 106 0.107214 CAACGCATACCTCCCCATGT 60.107 55.000 0.00 0.00 0.00 3.21
106 107 0.819259 CCAACGCATACCTCCCCATG 60.819 60.000 0.00 0.00 0.00 3.66
107 108 1.531748 CCAACGCATACCTCCCCAT 59.468 57.895 0.00 0.00 0.00 4.00
108 109 2.675242 CCCAACGCATACCTCCCCA 61.675 63.158 0.00 0.00 0.00 4.96
109 110 2.192175 CCCAACGCATACCTCCCC 59.808 66.667 0.00 0.00 0.00 4.81
110 111 1.029947 CAACCCAACGCATACCTCCC 61.030 60.000 0.00 0.00 0.00 4.30
111 112 1.654023 GCAACCCAACGCATACCTCC 61.654 60.000 0.00 0.00 0.00 4.30
112 113 0.676782 AGCAACCCAACGCATACCTC 60.677 55.000 0.00 0.00 0.00 3.85
113 114 0.616371 TAGCAACCCAACGCATACCT 59.384 50.000 0.00 0.00 0.00 3.08
114 115 1.602377 GATAGCAACCCAACGCATACC 59.398 52.381 0.00 0.00 0.00 2.73
115 116 1.602377 GGATAGCAACCCAACGCATAC 59.398 52.381 0.00 0.00 0.00 2.39
116 117 1.210722 TGGATAGCAACCCAACGCATA 59.789 47.619 0.00 0.00 0.00 3.14
117 118 0.034574 TGGATAGCAACCCAACGCAT 60.035 50.000 0.00 0.00 0.00 4.73
118 119 0.676466 CTGGATAGCAACCCAACGCA 60.676 55.000 0.00 0.00 31.11 5.24
119 120 0.676782 ACTGGATAGCAACCCAACGC 60.677 55.000 0.00 0.00 31.11 4.84
120 121 1.086696 CACTGGATAGCAACCCAACG 58.913 55.000 0.00 0.00 31.11 4.10
121 122 2.084546 GTCACTGGATAGCAACCCAAC 58.915 52.381 0.00 0.00 31.11 3.77
122 123 1.702401 TGTCACTGGATAGCAACCCAA 59.298 47.619 0.00 0.00 31.11 4.12
123 124 1.003118 GTGTCACTGGATAGCAACCCA 59.997 52.381 0.00 0.00 0.00 4.51
124 125 1.003118 TGTGTCACTGGATAGCAACCC 59.997 52.381 4.27 0.00 0.00 4.11
125 126 2.472695 TGTGTCACTGGATAGCAACC 57.527 50.000 4.27 0.00 0.00 3.77
126 127 3.871594 GGTATGTGTCACTGGATAGCAAC 59.128 47.826 4.27 0.00 0.00 4.17
127 128 3.517500 TGGTATGTGTCACTGGATAGCAA 59.482 43.478 4.27 0.00 0.00 3.91
128 129 3.103742 TGGTATGTGTCACTGGATAGCA 58.896 45.455 4.27 7.00 0.00 3.49
129 130 3.819564 TGGTATGTGTCACTGGATAGC 57.180 47.619 4.27 4.56 0.00 2.97
130 131 7.615757 TCCTATATGGTATGTGTCACTGGATAG 59.384 40.741 4.27 2.65 37.07 2.08
131 132 7.475299 TCCTATATGGTATGTGTCACTGGATA 58.525 38.462 4.27 0.00 37.07 2.59
132 133 6.322931 TCCTATATGGTATGTGTCACTGGAT 58.677 40.000 4.27 0.00 37.07 3.41
133 134 5.711698 TCCTATATGGTATGTGTCACTGGA 58.288 41.667 4.27 0.00 37.07 3.86
134 135 6.419484 TTCCTATATGGTATGTGTCACTGG 57.581 41.667 4.27 0.00 37.07 4.00
135 136 7.600375 GTGATTCCTATATGGTATGTGTCACTG 59.400 40.741 4.27 0.00 37.07 3.66
136 137 7.256332 GGTGATTCCTATATGGTATGTGTCACT 60.256 40.741 4.27 0.00 37.07 3.41
137 138 6.874134 GGTGATTCCTATATGGTATGTGTCAC 59.126 42.308 0.00 0.00 37.07 3.67
138 139 6.013725 GGGTGATTCCTATATGGTATGTGTCA 60.014 42.308 0.00 0.00 37.07 3.58
139 140 6.407202 GGGTGATTCCTATATGGTATGTGTC 58.593 44.000 0.00 0.00 37.07 3.67
140 141 5.250774 GGGGTGATTCCTATATGGTATGTGT 59.749 44.000 0.00 0.00 37.07 3.72
141 142 5.488919 AGGGGTGATTCCTATATGGTATGTG 59.511 44.000 0.00 0.00 37.07 3.21
142 143 5.676125 AGGGGTGATTCCTATATGGTATGT 58.324 41.667 0.00 0.00 37.07 2.29
143 144 7.937700 ATAGGGGTGATTCCTATATGGTATG 57.062 40.000 1.18 0.00 43.60 2.39
144 145 7.735321 GCTATAGGGGTGATTCCTATATGGTAT 59.265 40.741 9.48 0.00 44.34 2.73
145 146 7.073854 GCTATAGGGGTGATTCCTATATGGTA 58.926 42.308 9.48 0.00 44.34 3.25
146 147 5.905913 GCTATAGGGGTGATTCCTATATGGT 59.094 44.000 9.48 0.00 44.34 3.55
147 148 5.011125 CGCTATAGGGGTGATTCCTATATGG 59.989 48.000 8.91 2.64 44.34 2.74
148 149 5.509840 GCGCTATAGGGGTGATTCCTATATG 60.510 48.000 17.62 7.38 44.34 1.78
149 150 4.589374 GCGCTATAGGGGTGATTCCTATAT 59.411 45.833 17.62 0.00 44.34 0.86
150 151 3.958798 GCGCTATAGGGGTGATTCCTATA 59.041 47.826 17.62 8.89 43.60 1.31
151 152 2.766828 GCGCTATAGGGGTGATTCCTAT 59.233 50.000 17.62 7.65 46.19 2.57
152 153 2.176889 GCGCTATAGGGGTGATTCCTA 58.823 52.381 17.62 0.00 40.71 2.94
153 154 0.977395 GCGCTATAGGGGTGATTCCT 59.023 55.000 17.62 0.00 38.36 3.36
154 155 0.036294 GGCGCTATAGGGGTGATTCC 60.036 60.000 17.62 6.11 0.00 3.01
155 156 0.389948 CGGCGCTATAGGGGTGATTC 60.390 60.000 17.62 0.76 0.00 2.52
156 157 1.671742 CGGCGCTATAGGGGTGATT 59.328 57.895 17.62 0.00 0.00 2.57
157 158 2.283529 CCGGCGCTATAGGGGTGAT 61.284 63.158 17.62 0.00 0.00 3.06
158 159 2.915659 CCGGCGCTATAGGGGTGA 60.916 66.667 17.62 0.00 0.00 4.02
159 160 2.803817 AACCGGCGCTATAGGGGTG 61.804 63.158 17.62 0.00 0.00 4.61
160 161 2.445274 AACCGGCGCTATAGGGGT 60.445 61.111 17.62 5.31 0.00 4.95
161 162 2.030562 CAACCGGCGCTATAGGGG 59.969 66.667 17.62 4.71 0.00 4.79
162 163 2.665185 GCAACCGGCGCTATAGGG 60.665 66.667 7.64 12.30 0.00 3.53
184 185 2.034879 CAGGCCGCAACCACTAGTG 61.035 63.158 16.34 16.34 0.00 2.74
185 186 2.347490 CAGGCCGCAACCACTAGT 59.653 61.111 0.00 0.00 0.00 2.57
186 187 3.127533 GCAGGCCGCAACCACTAG 61.128 66.667 13.61 0.00 41.79 2.57
187 188 4.715523 GGCAGGCCGCAACCACTA 62.716 66.667 18.87 0.00 45.17 2.74
190 191 4.992740 ATTGGCAGGCCGCAACCA 62.993 61.111 18.87 12.42 45.17 3.67
191 192 4.440127 CATTGGCAGGCCGCAACC 62.440 66.667 18.87 10.10 45.17 3.77
203 204 1.031571 TCTTAAGCAGCCCGCATTGG 61.032 55.000 0.00 0.00 46.13 3.16
204 205 0.379669 CTCTTAAGCAGCCCGCATTG 59.620 55.000 0.00 0.00 46.13 2.82
205 206 0.749454 CCTCTTAAGCAGCCCGCATT 60.749 55.000 0.00 0.00 46.13 3.56
206 207 1.153086 CCTCTTAAGCAGCCCGCAT 60.153 57.895 0.00 0.00 46.13 4.73
207 208 1.836999 TTCCTCTTAAGCAGCCCGCA 61.837 55.000 0.00 0.00 46.13 5.69
208 209 1.078426 TTCCTCTTAAGCAGCCCGC 60.078 57.895 0.00 0.00 42.91 6.13
209 210 3.071580 CTTCCTCTTAAGCAGCCCG 57.928 57.895 0.00 0.00 0.00 6.13
227 228 1.398390 CCGGTGAAATAAGCACTCAGC 59.602 52.381 0.00 0.00 46.19 4.26
228 229 2.673368 GTCCGGTGAAATAAGCACTCAG 59.327 50.000 0.00 0.00 36.53 3.35
229 230 2.301870 AGTCCGGTGAAATAAGCACTCA 59.698 45.455 0.00 0.00 36.53 3.41
230 231 2.973945 AGTCCGGTGAAATAAGCACTC 58.026 47.619 0.00 0.00 36.53 3.51
231 232 3.074412 CAAGTCCGGTGAAATAAGCACT 58.926 45.455 0.00 0.00 36.53 4.40
232 233 2.812011 ACAAGTCCGGTGAAATAAGCAC 59.188 45.455 0.00 0.00 35.56 4.40
233 234 3.134574 ACAAGTCCGGTGAAATAAGCA 57.865 42.857 0.00 0.00 0.00 3.91
234 235 5.616488 TTTACAAGTCCGGTGAAATAAGC 57.384 39.130 0.00 0.00 0.00 3.09
235 236 5.180492 TGCTTTACAAGTCCGGTGAAATAAG 59.820 40.000 0.00 0.10 0.00 1.73
236 237 5.064558 TGCTTTACAAGTCCGGTGAAATAA 58.935 37.500 0.00 0.00 0.00 1.40
237 238 4.643463 TGCTTTACAAGTCCGGTGAAATA 58.357 39.130 0.00 0.00 0.00 1.40
238 239 3.482436 TGCTTTACAAGTCCGGTGAAAT 58.518 40.909 0.00 0.00 0.00 2.17
239 240 2.920524 TGCTTTACAAGTCCGGTGAAA 58.079 42.857 0.00 0.00 0.00 2.69
240 241 2.623878 TGCTTTACAAGTCCGGTGAA 57.376 45.000 0.00 0.00 0.00 3.18
241 242 2.851263 ATGCTTTACAAGTCCGGTGA 57.149 45.000 0.00 0.00 0.00 4.02
242 243 5.354234 AGATTTATGCTTTACAAGTCCGGTG 59.646 40.000 0.00 0.00 0.00 4.94
243 244 5.497474 AGATTTATGCTTTACAAGTCCGGT 58.503 37.500 0.00 0.00 0.00 5.28
244 245 7.730364 ATAGATTTATGCTTTACAAGTCCGG 57.270 36.000 0.00 0.00 0.00 5.14
245 246 9.651718 GAAATAGATTTATGCTTTACAAGTCCG 57.348 33.333 0.00 0.00 0.00 4.79
246 247 9.651718 CGAAATAGATTTATGCTTTACAAGTCC 57.348 33.333 0.00 0.00 0.00 3.85
247 248 9.651718 CCGAAATAGATTTATGCTTTACAAGTC 57.348 33.333 0.00 0.00 0.00 3.01
248 249 9.174166 ACCGAAATAGATTTATGCTTTACAAGT 57.826 29.630 0.00 0.00 0.00 3.16
358 365 0.760945 CAGAGGCCGGGAGTTATCCT 60.761 60.000 2.18 0.00 45.85 3.24
360 367 1.069935 GCAGAGGCCGGGAGTTATC 59.930 63.158 2.18 0.00 0.00 1.75
361 368 1.056700 ATGCAGAGGCCGGGAGTTAT 61.057 55.000 2.18 0.00 40.13 1.89
362 369 1.686325 GATGCAGAGGCCGGGAGTTA 61.686 60.000 2.18 0.00 40.13 2.24
365 372 3.457625 CTGATGCAGAGGCCGGGAG 62.458 68.421 2.18 0.00 40.13 4.30
366 373 3.473647 CTGATGCAGAGGCCGGGA 61.474 66.667 2.18 0.00 40.13 5.14
372 379 2.846039 GCATTGTTCTGATGCAGAGG 57.154 50.000 4.35 0.00 46.96 3.69
411 451 4.009675 TCGCTTGCTGGATTTTGTATTCT 58.990 39.130 0.00 0.00 0.00 2.40
412 452 4.355543 TCGCTTGCTGGATTTTGTATTC 57.644 40.909 0.00 0.00 0.00 1.75
417 457 2.420628 TGTTCGCTTGCTGGATTTTG 57.579 45.000 0.00 0.00 0.00 2.44
419 459 1.680735 TGTTGTTCGCTTGCTGGATTT 59.319 42.857 0.00 0.00 0.00 2.17
420 460 1.317613 TGTTGTTCGCTTGCTGGATT 58.682 45.000 0.00 0.00 0.00 3.01
422 462 1.001487 CAATGTTGTTCGCTTGCTGGA 60.001 47.619 0.00 0.00 0.00 3.86
423 463 1.001487 TCAATGTTGTTCGCTTGCTGG 60.001 47.619 0.00 0.00 0.00 4.85
424 464 2.404265 TCAATGTTGTTCGCTTGCTG 57.596 45.000 0.00 0.00 0.00 4.41
425 465 2.543653 GGTTCAATGTTGTTCGCTTGCT 60.544 45.455 0.00 0.00 0.00 3.91
427 467 2.043411 CGGTTCAATGTTGTTCGCTTG 58.957 47.619 0.00 0.00 0.00 4.01
428 468 1.001815 CCGGTTCAATGTTGTTCGCTT 60.002 47.619 0.00 0.00 0.00 4.68
429 469 0.591170 CCGGTTCAATGTTGTTCGCT 59.409 50.000 0.00 0.00 0.00 4.93
430 470 0.589223 TCCGGTTCAATGTTGTTCGC 59.411 50.000 0.00 0.00 0.00 4.70
431 471 3.341857 TTTCCGGTTCAATGTTGTTCG 57.658 42.857 0.00 0.00 0.00 3.95
432 472 6.128929 GCTTTATTTCCGGTTCAATGTTGTTC 60.129 38.462 0.00 0.00 0.00 3.18
433 473 5.694458 GCTTTATTTCCGGTTCAATGTTGTT 59.306 36.000 0.00 0.00 0.00 2.83
434 474 5.227152 GCTTTATTTCCGGTTCAATGTTGT 58.773 37.500 0.00 0.00 0.00 3.32
435 475 4.323336 CGCTTTATTTCCGGTTCAATGTTG 59.677 41.667 0.00 0.00 0.00 3.33
438 478 4.349663 TCGCTTTATTTCCGGTTCAATG 57.650 40.909 0.00 0.00 0.00 2.82
439 479 5.379732 TTTCGCTTTATTTCCGGTTCAAT 57.620 34.783 0.00 1.26 0.00 2.57
442 482 5.038247 TCTTTTCGCTTTATTTCCGGTTC 57.962 39.130 0.00 0.00 0.00 3.62
443 483 5.441709 TTCTTTTCGCTTTATTTCCGGTT 57.558 34.783 0.00 0.00 0.00 4.44
444 484 5.441709 TTTCTTTTCGCTTTATTTCCGGT 57.558 34.783 0.00 0.00 0.00 5.28
445 485 6.034577 GGATTTTCTTTTCGCTTTATTTCCGG 59.965 38.462 0.00 0.00 0.00 5.14
446 486 6.237201 CGGATTTTCTTTTCGCTTTATTTCCG 60.237 38.462 0.00 0.00 34.67 4.30
447 487 6.804783 TCGGATTTTCTTTTCGCTTTATTTCC 59.195 34.615 0.00 0.00 0.00 3.13
449 489 7.865889 ACTTCGGATTTTCTTTTCGCTTTATTT 59.134 29.630 0.00 0.00 0.00 1.40
450 490 7.368059 ACTTCGGATTTTCTTTTCGCTTTATT 58.632 30.769 0.00 0.00 0.00 1.40
451 491 6.909909 ACTTCGGATTTTCTTTTCGCTTTAT 58.090 32.000 0.00 0.00 0.00 1.40
452 492 6.308371 ACTTCGGATTTTCTTTTCGCTTTA 57.692 33.333 0.00 0.00 0.00 1.85
453 493 5.183014 ACTTCGGATTTTCTTTTCGCTTT 57.817 34.783 0.00 0.00 0.00 3.51
454 494 4.610680 CGACTTCGGATTTTCTTTTCGCTT 60.611 41.667 0.00 0.00 35.37 4.68
455 495 3.120649 CGACTTCGGATTTTCTTTTCGCT 60.121 43.478 0.00 0.00 35.37 4.93
456 496 3.153735 CGACTTCGGATTTTCTTTTCGC 58.846 45.455 0.00 0.00 35.37 4.70
458 498 4.141855 TGCGACTTCGGATTTTCTTTTC 57.858 40.909 0.02 0.00 40.23 2.29
469 509 2.125552 TGAGGCATGCGACTTCGG 60.126 61.111 12.44 0.00 40.23 4.30
470 510 2.792290 CGTGAGGCATGCGACTTCG 61.792 63.158 12.44 8.86 43.27 3.79
471 511 0.807667 ATCGTGAGGCATGCGACTTC 60.808 55.000 12.44 7.34 37.47 3.01
472 512 0.459899 TATCGTGAGGCATGCGACTT 59.540 50.000 12.44 0.00 37.47 3.01
473 513 0.031314 CTATCGTGAGGCATGCGACT 59.969 55.000 12.44 3.51 37.47 4.18
474 514 0.249073 ACTATCGTGAGGCATGCGAC 60.249 55.000 12.44 8.67 37.47 5.19
475 515 0.249031 CACTATCGTGAGGCATGCGA 60.249 55.000 12.44 2.82 43.97 5.10
476 516 0.249031 TCACTATCGTGAGGCATGCG 60.249 55.000 12.44 0.00 44.85 4.73
477 517 3.667448 TCACTATCGTGAGGCATGC 57.333 52.632 9.90 9.90 44.85 4.06
485 525 7.197017 AGTTATTTAGAGCAGTCACTATCGTG 58.803 38.462 0.00 0.00 42.59 4.35
486 526 7.336161 AGTTATTTAGAGCAGTCACTATCGT 57.664 36.000 0.00 0.00 0.00 3.73
487 527 8.561212 AGTAGTTATTTAGAGCAGTCACTATCG 58.439 37.037 0.00 0.00 0.00 2.92
492 532 9.465985 GGATTAGTAGTTATTTAGAGCAGTCAC 57.534 37.037 0.00 0.00 0.00 3.67
493 533 9.422681 AGGATTAGTAGTTATTTAGAGCAGTCA 57.577 33.333 0.00 0.00 0.00 3.41
507 547 9.182214 TCGTCTTGTAACATAGGATTAGTAGTT 57.818 33.333 0.00 0.00 0.00 2.24
508 548 8.743085 TCGTCTTGTAACATAGGATTAGTAGT 57.257 34.615 0.00 0.00 0.00 2.73
509 549 9.053840 TCTCGTCTTGTAACATAGGATTAGTAG 57.946 37.037 0.00 0.00 0.00 2.57
516 556 4.014406 TGCTCTCGTCTTGTAACATAGGA 58.986 43.478 0.00 0.00 0.00 2.94
518 558 6.706055 TTTTGCTCTCGTCTTGTAACATAG 57.294 37.500 0.00 0.00 0.00 2.23
520 560 5.758296 TCTTTTTGCTCTCGTCTTGTAACAT 59.242 36.000 0.00 0.00 0.00 2.71
525 565 5.560966 TTTTCTTTTTGCTCTCGTCTTGT 57.439 34.783 0.00 0.00 0.00 3.16
526 566 6.560983 GCATTTTTCTTTTTGCTCTCGTCTTG 60.561 38.462 0.00 0.00 32.41 3.02
527 567 5.460091 GCATTTTTCTTTTTGCTCTCGTCTT 59.540 36.000 0.00 0.00 32.41 3.01
528 568 4.978580 GCATTTTTCTTTTTGCTCTCGTCT 59.021 37.500 0.00 0.00 32.41 4.18
529 569 4.739716 TGCATTTTTCTTTTTGCTCTCGTC 59.260 37.500 0.00 0.00 36.10 4.20
531 571 4.503734 TGTGCATTTTTCTTTTTGCTCTCG 59.496 37.500 0.00 0.00 36.10 4.04
532 572 5.971895 TGTGCATTTTTCTTTTTGCTCTC 57.028 34.783 0.00 0.00 36.10 3.20
533 573 5.876460 AGTTGTGCATTTTTCTTTTTGCTCT 59.124 32.000 0.00 0.00 36.10 4.09
535 575 5.220453 CGAGTTGTGCATTTTTCTTTTTGCT 60.220 36.000 0.00 0.00 36.10 3.91
536 576 4.957372 CGAGTTGTGCATTTTTCTTTTTGC 59.043 37.500 0.00 0.00 35.67 3.68
537 577 6.093532 ACGAGTTGTGCATTTTTCTTTTTG 57.906 33.333 0.00 0.00 0.00 2.44
538 578 6.475402 CCTACGAGTTGTGCATTTTTCTTTTT 59.525 34.615 0.00 0.00 0.00 1.94
549 589 0.963225 TGTAGCCTACGAGTTGTGCA 59.037 50.000 0.00 0.00 0.00 4.57
550 590 1.067776 AGTGTAGCCTACGAGTTGTGC 60.068 52.381 0.00 0.00 0.00 4.57
551 591 3.299340 AAGTGTAGCCTACGAGTTGTG 57.701 47.619 0.00 0.00 0.00 3.33
552 592 4.332428 AAAAGTGTAGCCTACGAGTTGT 57.668 40.909 0.00 0.00 0.00 3.32
553 593 6.154445 TCTTAAAAGTGTAGCCTACGAGTTG 58.846 40.000 0.00 0.00 0.00 3.16
554 594 6.336842 TCTTAAAAGTGTAGCCTACGAGTT 57.663 37.500 0.00 0.00 0.00 3.01
555 595 5.972107 TCTTAAAAGTGTAGCCTACGAGT 57.028 39.130 0.00 0.00 0.00 4.18
556 596 5.805994 CCTTCTTAAAAGTGTAGCCTACGAG 59.194 44.000 0.00 0.00 0.00 4.18
557 597 5.477984 TCCTTCTTAAAAGTGTAGCCTACGA 59.522 40.000 0.00 0.00 0.00 3.43
558 598 5.717119 TCCTTCTTAAAAGTGTAGCCTACG 58.283 41.667 0.00 0.00 0.00 3.51
559 599 7.010275 CGATTCCTTCTTAAAAGTGTAGCCTAC 59.990 40.741 0.00 0.00 0.00 3.18
560 600 7.039882 CGATTCCTTCTTAAAAGTGTAGCCTA 58.960 38.462 0.00 0.00 0.00 3.93
563 603 6.453922 CGACGATTCCTTCTTAAAAGTGTAGC 60.454 42.308 0.00 0.00 0.00 3.58
564 604 6.453922 GCGACGATTCCTTCTTAAAAGTGTAG 60.454 42.308 0.00 0.00 0.00 2.74
566 606 4.151867 GCGACGATTCCTTCTTAAAAGTGT 59.848 41.667 0.00 0.00 0.00 3.55
568 608 3.367025 CGCGACGATTCCTTCTTAAAAGT 59.633 43.478 0.00 0.00 0.00 2.66
569 609 3.781280 GCGCGACGATTCCTTCTTAAAAG 60.781 47.826 12.10 0.00 0.00 2.27
571 611 1.657094 GCGCGACGATTCCTTCTTAAA 59.343 47.619 12.10 0.00 0.00 1.52
572 612 1.274596 GCGCGACGATTCCTTCTTAA 58.725 50.000 12.10 0.00 0.00 1.85
574 614 3.782042 GCGCGACGATTCCTTCTT 58.218 55.556 12.10 0.00 0.00 2.52
585 625 2.365444 ATCATCAATGCACGCGCGAC 62.365 55.000 39.36 27.33 42.97 5.19
586 626 2.173020 ATCATCAATGCACGCGCGA 61.173 52.632 39.36 15.84 42.97 5.87
588 628 0.927083 GTCATCATCAATGCACGCGC 60.927 55.000 5.73 0.00 35.17 6.86
590 630 0.652071 TCGTCATCATCAATGCACGC 59.348 50.000 0.00 0.00 38.08 5.34
591 631 1.929169 ACTCGTCATCATCAATGCACG 59.071 47.619 0.00 0.00 38.81 5.34
593 633 2.093553 TGGACTCGTCATCATCAATGCA 60.094 45.455 0.00 0.00 35.17 3.96
594 634 2.554142 TGGACTCGTCATCATCAATGC 58.446 47.619 0.00 0.00 35.17 3.56
597 637 3.676291 TGTTGGACTCGTCATCATCAA 57.324 42.857 0.00 0.00 0.00 2.57
598 638 3.195396 TCATGTTGGACTCGTCATCATCA 59.805 43.478 0.00 0.00 0.00 3.07
599 639 3.785486 TCATGTTGGACTCGTCATCATC 58.215 45.455 0.00 0.00 0.00 2.92
605 1080 2.457366 AACCTCATGTTGGACTCGTC 57.543 50.000 12.98 0.00 35.31 4.20
616 1091 4.256920 AGAATCCGAAGTTCAACCTCATG 58.743 43.478 3.32 0.00 0.00 3.07
619 1094 3.926616 TGAGAATCCGAAGTTCAACCTC 58.073 45.455 3.32 2.89 0.00 3.85
621 1096 3.623510 GGATGAGAATCCGAAGTTCAACC 59.376 47.826 3.32 0.00 0.00 3.77
622 1097 3.623510 GGGATGAGAATCCGAAGTTCAAC 59.376 47.826 3.32 0.00 41.63 3.18
625 1100 2.170607 TGGGGATGAGAATCCGAAGTTC 59.829 50.000 0.00 0.00 41.63 3.01
626 1101 2.196595 TGGGGATGAGAATCCGAAGTT 58.803 47.619 0.00 0.00 41.63 2.66
627 1102 1.879575 TGGGGATGAGAATCCGAAGT 58.120 50.000 0.00 0.00 41.63 3.01
628 1103 2.945668 GTTTGGGGATGAGAATCCGAAG 59.054 50.000 0.00 0.00 41.63 3.79
630 1105 1.211949 GGTTTGGGGATGAGAATCCGA 59.788 52.381 0.00 0.00 41.63 4.55
631 1106 1.064758 TGGTTTGGGGATGAGAATCCG 60.065 52.381 0.00 0.00 41.63 4.18
632 1107 2.826674 TGGTTTGGGGATGAGAATCC 57.173 50.000 0.00 0.00 39.99 3.01
633 1108 4.089361 AGTTTGGTTTGGGGATGAGAATC 58.911 43.478 0.00 0.00 0.00 2.52
634 1109 4.132122 AGTTTGGTTTGGGGATGAGAAT 57.868 40.909 0.00 0.00 0.00 2.40
635 1110 3.611025 AGTTTGGTTTGGGGATGAGAA 57.389 42.857 0.00 0.00 0.00 2.87
636 1111 3.117322 TGAAGTTTGGTTTGGGGATGAGA 60.117 43.478 0.00 0.00 0.00 3.27
637 1112 3.230134 TGAAGTTTGGTTTGGGGATGAG 58.770 45.455 0.00 0.00 0.00 2.90
638 1113 3.320610 TGAAGTTTGGTTTGGGGATGA 57.679 42.857 0.00 0.00 0.00 2.92
642 1117 2.703007 TGGATTGAAGTTTGGTTTGGGG 59.297 45.455 0.00 0.00 0.00 4.96
643 1118 4.040217 TGATGGATTGAAGTTTGGTTTGGG 59.960 41.667 0.00 0.00 0.00 4.12
645 1120 4.681025 CGTGATGGATTGAAGTTTGGTTTG 59.319 41.667 0.00 0.00 0.00 2.93
646 1121 4.340950 ACGTGATGGATTGAAGTTTGGTTT 59.659 37.500 0.00 0.00 0.00 3.27
649 1124 4.023279 TGAACGTGATGGATTGAAGTTTGG 60.023 41.667 0.00 0.00 0.00 3.28
650 1125 5.107109 TGAACGTGATGGATTGAAGTTTG 57.893 39.130 0.00 0.00 0.00 2.93
651 1126 4.320494 GCTGAACGTGATGGATTGAAGTTT 60.320 41.667 0.00 0.00 0.00 2.66
652 1127 3.189287 GCTGAACGTGATGGATTGAAGTT 59.811 43.478 0.00 0.00 0.00 2.66
653 1128 2.744202 GCTGAACGTGATGGATTGAAGT 59.256 45.455 0.00 0.00 0.00 3.01
657 1132 2.159476 CCTTGCTGAACGTGATGGATTG 60.159 50.000 0.00 0.00 0.00 2.67
658 1133 2.086869 CCTTGCTGAACGTGATGGATT 58.913 47.619 0.00 0.00 0.00 3.01
660 1135 0.684535 TCCTTGCTGAACGTGATGGA 59.315 50.000 0.00 0.00 0.00 3.41
661 1136 0.798776 GTCCTTGCTGAACGTGATGG 59.201 55.000 0.00 0.00 0.00 3.51
662 1137 1.195448 GTGTCCTTGCTGAACGTGATG 59.805 52.381 0.00 0.00 0.00 3.07
663 1138 1.512926 GTGTCCTTGCTGAACGTGAT 58.487 50.000 0.00 0.00 0.00 3.06
666 1141 0.874607 GTCGTGTCCTTGCTGAACGT 60.875 55.000 0.00 0.00 35.79 3.99
668 1143 0.582005 GTGTCGTGTCCTTGCTGAAC 59.418 55.000 0.00 0.00 0.00 3.18
671 1146 1.013596 TTTGTGTCGTGTCCTTGCTG 58.986 50.000 0.00 0.00 0.00 4.41
673 1148 0.315869 CGTTTGTGTCGTGTCCTTGC 60.316 55.000 0.00 0.00 0.00 4.01
674 1149 0.315869 GCGTTTGTGTCGTGTCCTTG 60.316 55.000 0.00 0.00 0.00 3.61
676 1151 2.235016 CGCGTTTGTGTCGTGTCCT 61.235 57.895 0.00 0.00 34.71 3.85
677 1152 2.244382 CGCGTTTGTGTCGTGTCC 59.756 61.111 0.00 0.00 34.71 4.02
678 1153 3.000266 ACGCGTTTGTGTCGTGTC 59.000 55.556 5.58 0.00 46.49 3.67
685 1160 1.057636 ACTATGTCGACGCGTTTGTG 58.942 50.000 15.53 4.11 0.00 3.33
686 1161 1.057636 CACTATGTCGACGCGTTTGT 58.942 50.000 15.53 0.30 0.00 2.83
687 1162 1.333115 TCACTATGTCGACGCGTTTG 58.667 50.000 15.53 9.97 0.00 2.93
691 1166 0.934901 CCCATCACTATGTCGACGCG 60.935 60.000 11.62 3.53 0.00 6.01
692 1167 0.384309 TCCCATCACTATGTCGACGC 59.616 55.000 11.62 0.00 0.00 5.19
693 1168 1.001268 CCTCCCATCACTATGTCGACG 60.001 57.143 11.62 0.00 0.00 5.12
694 1169 1.269831 GCCTCCCATCACTATGTCGAC 60.270 57.143 9.11 9.11 0.00 4.20
696 1171 0.319040 CGCCTCCCATCACTATGTCG 60.319 60.000 0.00 0.00 0.00 4.35
697 1172 0.034059 CCGCCTCCCATCACTATGTC 59.966 60.000 0.00 0.00 0.00 3.06
698 1173 2.044806 GCCGCCTCCCATCACTATGT 62.045 60.000 0.00 0.00 0.00 2.29
699 1174 1.302033 GCCGCCTCCCATCACTATG 60.302 63.158 0.00 0.00 0.00 2.23
709 1184 4.899239 CATCAGTCGGCCGCCTCC 62.899 72.222 23.51 8.12 0.00 4.30
710 1185 3.838271 TCATCAGTCGGCCGCCTC 61.838 66.667 23.51 13.48 0.00 4.70
712 1187 2.685387 CTAGTCATCAGTCGGCCGCC 62.685 65.000 23.51 10.19 0.00 6.13
713 1188 1.299468 CTAGTCATCAGTCGGCCGC 60.299 63.158 23.51 16.31 0.00 6.53
714 1189 1.306148 TACTAGTCATCAGTCGGCCG 58.694 55.000 22.12 22.12 0.00 6.13
715 1190 2.950309 TCTTACTAGTCATCAGTCGGCC 59.050 50.000 0.00 0.00 0.00 6.13
716 1191 3.628487 AGTCTTACTAGTCATCAGTCGGC 59.372 47.826 0.00 0.00 0.00 5.54
718 1193 7.169476 TCGATAAGTCTTACTAGTCATCAGTCG 59.831 40.741 0.00 2.14 0.00 4.18
721 2030 9.047371 TCTTCGATAAGTCTTACTAGTCATCAG 57.953 37.037 0.00 0.00 34.13 2.90
739 2048 6.884295 ACATTCCTTTGTTTCCATCTTCGATA 59.116 34.615 0.00 0.00 0.00 2.92
783 2092 8.663025 TCTCTTGTAGTACGTACTTGATAGTTG 58.337 37.037 31.58 18.32 37.73 3.16
785 2094 8.783833 TTCTCTTGTAGTACGTACTTGATAGT 57.216 34.615 31.58 9.90 37.73 2.12
786 2095 9.653067 CATTCTCTTGTAGTACGTACTTGATAG 57.347 37.037 31.58 21.72 37.73 2.08
787 2096 9.170734 ACATTCTCTTGTAGTACGTACTTGATA 57.829 33.333 31.58 12.53 37.73 2.15
788 2097 7.968956 CACATTCTCTTGTAGTACGTACTTGAT 59.031 37.037 31.58 11.74 37.73 2.57
789 2098 7.173735 TCACATTCTCTTGTAGTACGTACTTGA 59.826 37.037 31.58 20.56 37.73 3.02
790 2099 7.303261 TCACATTCTCTTGTAGTACGTACTTG 58.697 38.462 31.58 21.56 37.73 3.16
791 2100 7.444629 TCACATTCTCTTGTAGTACGTACTT 57.555 36.000 31.58 16.48 37.73 2.24
792 2101 7.444629 TTCACATTCTCTTGTAGTACGTACT 57.555 36.000 29.62 29.62 40.24 2.73
793 2102 8.511465 TTTTCACATTCTCTTGTAGTACGTAC 57.489 34.615 18.10 18.10 0.00 3.67
794 2103 7.811236 CCTTTTCACATTCTCTTGTAGTACGTA 59.189 37.037 0.00 0.00 0.00 3.57
795 2104 6.645415 CCTTTTCACATTCTCTTGTAGTACGT 59.355 38.462 0.00 0.00 0.00 3.57
796 2105 6.866770 TCCTTTTCACATTCTCTTGTAGTACG 59.133 38.462 0.00 0.00 0.00 3.67
797 2106 7.332182 CCTCCTTTTCACATTCTCTTGTAGTAC 59.668 40.741 0.00 0.00 0.00 2.73
798 2107 7.234782 TCCTCCTTTTCACATTCTCTTGTAGTA 59.765 37.037 0.00 0.00 0.00 1.82
799 2108 6.043243 TCCTCCTTTTCACATTCTCTTGTAGT 59.957 38.462 0.00 0.00 0.00 2.73
800 2109 6.370166 GTCCTCCTTTTCACATTCTCTTGTAG 59.630 42.308 0.00 0.00 0.00 2.74
820 2129 9.282569 AGAAATATCTGATGCATTTTAGTCCTC 57.717 33.333 0.00 0.00 33.59 3.71
823 2132 9.674824 CCAAGAAATATCTGATGCATTTTAGTC 57.325 33.333 0.00 0.00 35.59 2.59
824 2133 9.412460 TCCAAGAAATATCTGATGCATTTTAGT 57.588 29.630 0.00 0.00 35.59 2.24
825 2134 9.894783 CTCCAAGAAATATCTGATGCATTTTAG 57.105 33.333 0.00 0.15 35.59 1.85
826 2135 9.631257 TCTCCAAGAAATATCTGATGCATTTTA 57.369 29.630 0.00 0.00 35.59 1.52
827 2136 8.529424 TCTCCAAGAAATATCTGATGCATTTT 57.471 30.769 0.00 0.00 35.59 1.82
828 2137 8.411683 GTTCTCCAAGAAATATCTGATGCATTT 58.588 33.333 0.00 0.00 35.75 2.32
847 2162 1.207089 CCTTATCTGCGTGGTTCTCCA 59.793 52.381 0.00 0.00 42.05 3.86
848 2163 1.480954 TCCTTATCTGCGTGGTTCTCC 59.519 52.381 0.00 0.00 0.00 3.71
855 2170 0.758734 TGGGGATCCTTATCTGCGTG 59.241 55.000 12.58 0.00 32.29 5.34
859 2174 3.455910 TGTGTTCTGGGGATCCTTATCTG 59.544 47.826 12.58 3.98 32.29 2.90
907 2222 2.636403 ACCTGGAGTTGTGGTAGTTACC 59.364 50.000 0.00 1.25 46.62 2.85
924 2239 3.119101 AGGAGCTCGTGTATGTTAACCTG 60.119 47.826 8.40 0.00 0.00 4.00
925 2240 3.097614 AGGAGCTCGTGTATGTTAACCT 58.902 45.455 8.40 0.00 0.00 3.50
962 2284 4.334837 GCTGCTACTCTGCCGATC 57.665 61.111 0.00 0.00 34.04 3.69
1162 2492 2.230994 TAGCCGTGCAGGAAGAGCAG 62.231 60.000 8.24 0.00 43.63 4.24
1167 2497 1.153549 GAGGTAGCCGTGCAGGAAG 60.154 63.158 8.24 0.00 45.00 3.46
1171 2501 2.510238 GCAGAGGTAGCCGTGCAG 60.510 66.667 10.42 0.00 37.96 4.41
1246 2576 5.944599 TGATATAAGATACCTGAGGACCGAC 59.055 44.000 4.99 0.00 0.00 4.79
1250 2580 8.091449 CCTTGTTGATATAAGATACCTGAGGAC 58.909 40.741 4.99 0.00 0.00 3.85
1262 2592 5.812642 AGCTTGACGACCTTGTTGATATAAG 59.187 40.000 0.00 0.00 0.00 1.73
1269 2602 3.498397 ACATTAGCTTGACGACCTTGTTG 59.502 43.478 0.00 0.00 0.00 3.33
1279 2612 1.348594 GCGCCGACATTAGCTTGAC 59.651 57.895 0.00 0.00 0.00 3.18
1297 2630 1.473677 TGGAGCAGAAATTCATTGCCG 59.526 47.619 3.96 0.00 38.58 5.69
1307 2643 3.326006 AGTGTTCATCTCTGGAGCAGAAA 59.674 43.478 0.00 0.00 40.18 2.52
1312 2648 2.999355 GTTCAGTGTTCATCTCTGGAGC 59.001 50.000 0.00 0.00 37.98 4.70
1373 2713 1.406539 GAGTTTATCTCGCCGGTGGTA 59.593 52.381 16.49 3.69 33.25 3.25
1421 2761 0.889186 GCTTGGAAGAAAGGCCGACA 60.889 55.000 0.00 0.00 0.00 4.35
1423 2763 0.321653 GAGCTTGGAAGAAAGGCCGA 60.322 55.000 0.00 0.00 0.00 5.54
1430 2770 1.767692 GGGTGGGAGCTTGGAAGAA 59.232 57.895 0.00 0.00 0.00 2.52
1480 2820 7.656137 GGTTAAATTAGAGAGCAATCGATGGTA 59.344 37.037 0.00 0.00 40.59 3.25
1519 2870 9.346005 TGATGATGCAATTGTTAGTATCTTGAT 57.654 29.630 7.40 0.00 0.00 2.57
1546 2903 1.482182 CGGAGATGGACACCTGATGAA 59.518 52.381 0.00 0.00 0.00 2.57
1547 2904 1.114627 CGGAGATGGACACCTGATGA 58.885 55.000 0.00 0.00 0.00 2.92
1548 2905 0.105593 CCGGAGATGGACACCTGATG 59.894 60.000 0.00 0.00 0.00 3.07
1697 3054 1.112113 TCGGCTTGTAGACCAGGATC 58.888 55.000 0.00 0.00 0.00 3.36
1862 3219 3.834799 CCGTAGTCCCTCGCCACC 61.835 72.222 0.00 0.00 0.00 4.61
1990 3347 1.971167 TTGAGGAACGCCACCATGC 60.971 57.895 0.00 0.00 36.29 4.06
2009 3366 1.380302 CTTCCCCTCCACCCACTTG 59.620 63.158 0.00 0.00 0.00 3.16
2030 3387 0.392863 TCATGGCATCCAACCACTCG 60.393 55.000 0.00 0.00 40.82 4.18
2056 3413 1.374252 ACAGGCGTGACATCCGTTC 60.374 57.895 14.38 0.00 0.00 3.95
2060 3417 2.034879 CACCACAGGCGTGACATCC 61.035 63.158 14.38 0.00 46.80 3.51
2062 3419 2.669569 GCACCACAGGCGTGACAT 60.670 61.111 14.38 0.00 46.80 3.06
2063 3420 3.860605 AGCACCACAGGCGTGACA 61.861 61.111 14.38 0.00 46.80 3.58
2067 3424 4.626081 GGACAGCACCACAGGCGT 62.626 66.667 0.00 0.00 36.08 5.68
2117 3474 2.021355 GAGGACTGACAAGGCATCAG 57.979 55.000 10.74 10.74 42.09 2.90
2133 3490 6.088749 CGCTATCGATTGAAACTCTAATGAGG 59.911 42.308 11.17 0.00 40.32 3.86
2134 3491 6.088749 CCGCTATCGATTGAAACTCTAATGAG 59.911 42.308 11.17 0.00 41.15 2.90
2147 3504 4.559251 GCTATGAGTAACCGCTATCGATTG 59.441 45.833 1.71 2.00 38.10 2.67
2161 3518 1.676529 GTCGCACAGGAGCTATGAGTA 59.323 52.381 5.45 0.00 0.00 2.59
2234 3591 6.767524 TTTACCTGGTCAAAATTATCGCAT 57.232 33.333 0.63 0.00 0.00 4.73
2240 3597 6.378848 GTGGGCTATTTACCTGGTCAAAATTA 59.621 38.462 0.63 0.00 0.00 1.40
2243 3600 4.083565 GTGGGCTATTTACCTGGTCAAAA 58.916 43.478 0.63 0.00 0.00 2.44
2249 3607 0.107410 TGCGTGGGCTATTTACCTGG 60.107 55.000 0.00 0.00 40.82 4.45
2290 3648 0.833287 ACAGCTAACGAGGGCATCAT 59.167 50.000 0.00 0.00 0.00 2.45
2423 3781 1.517538 AAGGGGATGAATGGGTGGCA 61.518 55.000 0.00 0.00 0.00 4.92
2427 3785 0.636647 GGGAAAGGGGATGAATGGGT 59.363 55.000 0.00 0.00 0.00 4.51
2499 3857 7.716998 GGTCCATACTGTCATCATTCTAAATGT 59.283 37.037 0.04 0.00 0.00 2.71
2502 3860 6.280643 CGGTCCATACTGTCATCATTCTAAA 58.719 40.000 0.00 0.00 0.00 1.85
2504 3862 4.280929 CCGGTCCATACTGTCATCATTCTA 59.719 45.833 0.00 0.00 0.00 2.10
2506 3864 3.181465 ACCGGTCCATACTGTCATCATTC 60.181 47.826 0.00 0.00 0.00 2.67
2511 3869 0.178068 GCACCGGTCCATACTGTCAT 59.822 55.000 2.59 0.00 0.00 3.06
2512 3870 0.902984 AGCACCGGTCCATACTGTCA 60.903 55.000 2.59 0.00 0.00 3.58
2578 3936 3.099905 TGTCATCCCTCTTAGTGACCAG 58.900 50.000 0.00 0.00 40.07 4.00
2721 4079 5.827666 TCCAATCGAGGAGAAAAACAAAAC 58.172 37.500 0.00 0.00 32.77 2.43
2733 4091 4.226394 TGAACCCTAAAATCCAATCGAGGA 59.774 41.667 0.00 0.00 43.01 3.71
2734 4092 4.523083 TGAACCCTAAAATCCAATCGAGG 58.477 43.478 0.00 0.00 0.00 4.63
2736 4094 5.505780 ACATGAACCCTAAAATCCAATCGA 58.494 37.500 0.00 0.00 0.00 3.59
2737 4095 5.835113 ACATGAACCCTAAAATCCAATCG 57.165 39.130 0.00 0.00 0.00 3.34
2738 4096 6.935167 ACAACATGAACCCTAAAATCCAATC 58.065 36.000 0.00 0.00 0.00 2.67
2739 4097 6.933514 ACAACATGAACCCTAAAATCCAAT 57.066 33.333 0.00 0.00 0.00 3.16
2744 4105 8.043710 TGAAAACAACAACATGAACCCTAAAAT 58.956 29.630 0.00 0.00 0.00 1.82
2745 4106 7.386851 TGAAAACAACAACATGAACCCTAAAA 58.613 30.769 0.00 0.00 0.00 1.52
2962 4324 2.256158 GCAGTTCAGCATTGCGCA 59.744 55.556 5.66 5.66 46.13 6.09
2989 4351 1.890489 TCAGTTCCTCGGTCAATTCGA 59.110 47.619 0.00 0.00 35.24 3.71
2994 4356 2.963101 TCTTCTTCAGTTCCTCGGTCAA 59.037 45.455 0.00 0.00 0.00 3.18
3053 4415 4.415596 TCCCTGCCATGAAATTTACTTGT 58.584 39.130 0.00 0.00 0.00 3.16
3058 4420 3.756082 ACCTCCCTGCCATGAAATTTA 57.244 42.857 0.00 0.00 0.00 1.40
3063 4425 1.965414 TAGAACCTCCCTGCCATGAA 58.035 50.000 0.00 0.00 0.00 2.57
3075 4438 7.281774 CAGAGCAATGATACAACAATAGAACCT 59.718 37.037 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.