Multiple sequence alignment - TraesCS3A01G100200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G100200 chr3A 100.000 8193 0 0 1 8193 64795388 64787196 0.000000e+00 15130.0
1 TraesCS3A01G100200 chr3A 98.578 211 3 0 1 211 87682406 87682196 2.790000e-99 374.0
2 TraesCS3A01G100200 chr3A 95.270 148 4 3 4566 4713 64790690 64790546 1.780000e-56 231.0
3 TraesCS3A01G100200 chr3A 95.270 148 4 3 4699 4843 64790823 64790676 1.780000e-56 231.0
4 TraesCS3A01G100200 chr3A 95.614 114 5 0 1271 1384 64794082 64793969 5.050000e-42 183.0
5 TraesCS3A01G100200 chr3A 95.614 114 5 0 1307 1420 64794118 64794005 5.050000e-42 183.0
6 TraesCS3A01G100200 chr3A 93.590 78 5 0 1271 1348 64794046 64793969 5.200000e-22 117.0
7 TraesCS3A01G100200 chr3A 93.590 78 5 0 1343 1420 64794118 64794041 5.200000e-22 117.0
8 TraesCS3A01G100200 chr3D 96.898 7866 169 36 375 8193 53492840 53485003 0.000000e+00 13104.0
9 TraesCS3A01G100200 chr3D 91.500 200 5 1 1185 1384 53491945 53491758 1.750000e-66 265.0
10 TraesCS3A01G100200 chr3D 95.946 148 3 3 4566 4713 53488480 53488336 3.820000e-58 237.0
11 TraesCS3A01G100200 chr3D 93.919 148 6 3 4699 4843 53488613 53488466 3.850000e-53 220.0
12 TraesCS3A01G100200 chr3D 89.820 167 16 1 211 377 7928280 7928445 6.440000e-51 213.0
13 TraesCS3A01G100200 chr3B 94.843 2133 70 18 1307 3423 83911480 83909372 0.000000e+00 3293.0
14 TraesCS3A01G100200 chr3B 93.000 2100 107 23 6118 8193 83906840 83904757 0.000000e+00 3027.0
15 TraesCS3A01G100200 chr3B 95.783 1660 52 5 4699 6352 83908307 83906660 0.000000e+00 2662.0
16 TraesCS3A01G100200 chr3B 95.967 1215 34 5 3498 4711 83909362 83908162 0.000000e+00 1958.0
17 TraesCS3A01G100200 chr3B 88.196 1042 27 25 376 1350 83912416 83911404 0.000000e+00 1155.0
18 TraesCS3A01G100200 chr3B 86.310 168 19 4 211 376 9108932 9108767 6.530000e-41 180.0
19 TraesCS3A01G100200 chrUn 100.000 415 0 0 1652 2066 477248799 477249213 0.000000e+00 767.0
20 TraesCS3A01G100200 chrUn 85.799 169 20 4 211 377 477604368 477604202 8.450000e-40 176.0
21 TraesCS3A01G100200 chr6A 98.598 214 3 0 1 214 206736376 206736163 6.000000e-101 379.0
22 TraesCS3A01G100200 chr6A 91.304 46 4 0 2553 2598 156195737 156195692 6.860000e-06 63.9
23 TraesCS3A01G100200 chr2A 98.578 211 3 0 1 211 537033818 537034028 2.790000e-99 374.0
24 TraesCS3A01G100200 chr2A 98.104 211 4 0 1 211 448463960 448464170 1.300000e-97 368.0
25 TraesCS3A01G100200 chr2A 98.104 211 4 0 1 211 490503845 490504055 1.300000e-97 368.0
26 TraesCS3A01G100200 chr2A 82.286 175 27 4 211 383 12619652 12619480 1.840000e-31 148.0
27 TraesCS3A01G100200 chr7A 98.104 211 4 0 1 211 604227715 604227925 1.300000e-97 368.0
28 TraesCS3A01G100200 chr7A 82.036 167 30 0 211 377 42661380 42661546 8.570000e-30 143.0
29 TraesCS3A01G100200 chr5A 97.664 214 5 0 1 214 8953984 8953771 1.300000e-97 368.0
30 TraesCS3A01G100200 chr5A 98.104 211 4 0 1 211 635172398 635172608 1.300000e-97 368.0
31 TraesCS3A01G100200 chr1A 98.104 211 4 0 1 211 312959274 312959484 1.300000e-97 368.0
32 TraesCS3A01G100200 chr6B 85.799 169 20 4 211 377 11369973 11370139 8.450000e-40 176.0
33 TraesCS3A01G100200 chr6B 85.799 169 20 4 211 377 11393242 11393408 8.450000e-40 176.0
34 TraesCS3A01G100200 chr4A 84.524 168 24 2 211 377 166145871 166146037 1.830000e-36 165.0
35 TraesCS3A01G100200 chr1B 83.432 169 24 4 211 377 74120094 74119928 3.960000e-33 154.0
36 TraesCS3A01G100200 chr6D 93.478 46 3 0 2553 2598 124944804 124944849 1.480000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G100200 chr3A 64787196 64795388 8192 True 15130.000000 15130 100.000000 1 8193 1 chr3A.!!$R1 8192
1 TraesCS3A01G100200 chr3D 53485003 53492840 7837 True 13104.000000 13104 96.898000 375 8193 1 chr3D.!!$R1 7818
2 TraesCS3A01G100200 chr3D 53488336 53491945 3609 True 240.666667 265 93.788333 1185 4843 3 chr3D.!!$R2 3658
3 TraesCS3A01G100200 chr3B 83904757 83912416 7659 True 2419.000000 3293 93.557800 376 8193 5 chr3B.!!$R2 7817

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
247 248 0.034863 GGCCGAGGTTGATTGGGTAA 60.035 55.000 0.00 0.0 0.00 2.85 F
361 362 0.112412 AGGCTCCATTTTGGTTCGGT 59.888 50.000 0.00 0.0 39.03 4.69 F
362 363 0.526211 GGCTCCATTTTGGTTCGGTC 59.474 55.000 0.00 0.0 39.03 4.79 F
1386 1511 0.752743 AAGGTCAGCAAGCACAGCAA 60.753 50.000 0.00 0.0 0.00 3.91 F
1387 1512 1.008079 GGTCAGCAAGCACAGCAAC 60.008 57.895 0.00 0.0 0.00 4.17 F
1388 1513 1.008079 GTCAGCAAGCACAGCAACC 60.008 57.895 0.00 0.0 0.00 3.77 F
1450 1575 1.799258 GCAAGGGTCACAACAGCCAG 61.799 60.000 0.00 0.0 36.28 4.85 F
2288 2413 2.954318 GCGGAGTGGATACTAACTACCA 59.046 50.000 0.00 0.0 37.25 3.25 F
3454 3594 3.872511 TCTGCAGTTGGCCATAAATTG 57.127 42.857 14.67 0.0 43.89 2.32 F
5321 5592 2.681848 CCATGCTTTTGTTTGTTTGCCA 59.318 40.909 0.00 0.0 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1404 1529 0.879765 GCATCTGTTCTTGCTGCTGT 59.120 50.000 0.00 0.0 35.95 4.40 R
2288 2413 2.100605 GCTACTAGCCAGTTGTTGCT 57.899 50.000 0.00 0.0 41.57 3.91 R
2789 2917 8.458573 AGTTAGTGGTGTCAATTTCATAAACA 57.541 30.769 0.00 0.0 0.00 2.83 R
3177 3305 1.877443 AGTTGCGTTTGGAATAGCGTT 59.123 42.857 0.00 0.0 0.00 4.84 R
3720 3860 5.221722 ACAACTCAAGAGAAAGCATACCTCA 60.222 40.000 3.73 0.0 0.00 3.86 R
3924 4064 0.615331 ATGTCACTACACTGCCCAGG 59.385 55.000 0.00 0.0 38.78 4.45 R
3963 4103 5.520288 ACATCAATTCTTCCGATAGTTGTCG 59.480 40.000 0.00 0.0 41.13 4.35 R
4286 4426 0.543749 CCAGTGTCTTCCCTGATCCC 59.456 60.000 0.00 0.0 0.00 3.85 R
5434 5708 0.737715 GAATCTGCTCCAAGCGACGT 60.738 55.000 0.00 0.0 46.26 4.34 R
7440 7768 0.255890 AACTACCGCCCATGCTTCAT 59.744 50.000 0.00 0.0 34.43 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.506039 GTTTTAGGTGGCCCCGTT 57.494 55.556 0.00 0.00 38.74 4.44
18 19 2.736197 GTTTTAGGTGGCCCCGTTT 58.264 52.632 0.00 0.00 38.74 3.60
19 20 1.908344 GTTTTAGGTGGCCCCGTTTA 58.092 50.000 0.00 0.00 38.74 2.01
20 21 2.237643 GTTTTAGGTGGCCCCGTTTAA 58.762 47.619 0.00 0.00 38.74 1.52
21 22 2.203470 TTTAGGTGGCCCCGTTTAAG 57.797 50.000 0.00 0.00 38.74 1.85
22 23 1.360185 TTAGGTGGCCCCGTTTAAGA 58.640 50.000 0.00 0.00 38.74 2.10
23 24 0.906775 TAGGTGGCCCCGTTTAAGAG 59.093 55.000 0.00 0.00 38.74 2.85
24 25 2.044555 GGTGGCCCCGTTTAAGAGC 61.045 63.158 0.00 0.00 0.00 4.09
25 26 2.046700 TGGCCCCGTTTAAGAGCG 60.047 61.111 0.00 0.00 0.00 5.03
46 47 4.159857 CGGATATCACGCTTTACTAGAGC 58.840 47.826 4.83 0.00 36.79 4.09
71 72 5.273523 GAAGCATTCACAATTTTCCAAGC 57.726 39.130 0.00 0.00 46.62 4.01
72 73 4.339872 AGCATTCACAATTTTCCAAGCA 57.660 36.364 0.00 0.00 0.00 3.91
73 74 4.706035 AGCATTCACAATTTTCCAAGCAA 58.294 34.783 0.00 0.00 0.00 3.91
74 75 5.310451 AGCATTCACAATTTTCCAAGCAAT 58.690 33.333 0.00 0.00 0.00 3.56
75 76 6.465948 AGCATTCACAATTTTCCAAGCAATA 58.534 32.000 0.00 0.00 0.00 1.90
76 77 6.369615 AGCATTCACAATTTTCCAAGCAATAC 59.630 34.615 0.00 0.00 0.00 1.89
77 78 6.402442 GCATTCACAATTTTCCAAGCAATACC 60.402 38.462 0.00 0.00 0.00 2.73
78 79 5.146010 TCACAATTTTCCAAGCAATACCC 57.854 39.130 0.00 0.00 0.00 3.69
79 80 4.020662 TCACAATTTTCCAAGCAATACCCC 60.021 41.667 0.00 0.00 0.00 4.95
80 81 3.906846 ACAATTTTCCAAGCAATACCCCA 59.093 39.130 0.00 0.00 0.00 4.96
81 82 4.535692 ACAATTTTCCAAGCAATACCCCAT 59.464 37.500 0.00 0.00 0.00 4.00
82 83 5.014018 ACAATTTTCCAAGCAATACCCCATT 59.986 36.000 0.00 0.00 0.00 3.16
83 84 6.214412 ACAATTTTCCAAGCAATACCCCATTA 59.786 34.615 0.00 0.00 0.00 1.90
84 85 5.669164 TTTTCCAAGCAATACCCCATTAC 57.331 39.130 0.00 0.00 0.00 1.89
85 86 2.925724 TCCAAGCAATACCCCATTACG 58.074 47.619 0.00 0.00 0.00 3.18
86 87 1.953686 CCAAGCAATACCCCATTACGG 59.046 52.381 0.00 0.00 0.00 4.02
98 99 3.553828 CCATTACGGGTACATGAAGGT 57.446 47.619 0.00 0.00 0.00 3.50
99 100 3.881220 CCATTACGGGTACATGAAGGTT 58.119 45.455 0.00 0.00 0.00 3.50
100 101 5.026038 CCATTACGGGTACATGAAGGTTA 57.974 43.478 0.00 0.00 0.00 2.85
101 102 5.430007 CCATTACGGGTACATGAAGGTTAA 58.570 41.667 0.00 0.00 0.00 2.01
102 103 5.526111 CCATTACGGGTACATGAAGGTTAAG 59.474 44.000 0.00 0.00 0.00 1.85
103 104 5.999205 TTACGGGTACATGAAGGTTAAGA 57.001 39.130 0.00 0.00 0.00 2.10
104 105 6.549433 TTACGGGTACATGAAGGTTAAGAT 57.451 37.500 0.00 0.00 0.00 2.40
105 106 4.766375 ACGGGTACATGAAGGTTAAGATG 58.234 43.478 0.00 0.00 0.00 2.90
106 107 3.560068 CGGGTACATGAAGGTTAAGATGC 59.440 47.826 0.00 0.00 0.00 3.91
107 108 3.883489 GGGTACATGAAGGTTAAGATGCC 59.117 47.826 0.00 0.00 0.00 4.40
108 109 3.883489 GGTACATGAAGGTTAAGATGCCC 59.117 47.826 0.00 0.00 0.00 5.36
109 110 2.643551 ACATGAAGGTTAAGATGCCCG 58.356 47.619 0.00 0.00 0.00 6.13
110 111 1.949525 CATGAAGGTTAAGATGCCCGG 59.050 52.381 0.00 0.00 0.00 5.73
111 112 0.254747 TGAAGGTTAAGATGCCCGGG 59.745 55.000 19.09 19.09 0.00 5.73
112 113 1.076995 AAGGTTAAGATGCCCGGGC 60.077 57.895 39.40 39.40 42.35 6.13
113 114 2.518587 GGTTAAGATGCCCGGGCC 60.519 66.667 41.75 27.67 41.09 5.80
114 115 2.900337 GTTAAGATGCCCGGGCCG 60.900 66.667 41.75 21.46 41.09 6.13
115 116 3.084646 TTAAGATGCCCGGGCCGA 61.085 61.111 41.75 26.23 41.09 5.54
116 117 2.671164 TTAAGATGCCCGGGCCGAA 61.671 57.895 41.75 25.39 41.09 4.30
117 118 1.990160 TTAAGATGCCCGGGCCGAAT 61.990 55.000 41.75 29.10 41.09 3.34
118 119 2.674563 TAAGATGCCCGGGCCGAATG 62.675 60.000 41.75 16.55 41.09 2.67
122 123 4.894896 GCCCGGGCCGAATGGAAT 62.895 66.667 36.64 0.00 37.49 3.01
123 124 2.123897 CCCGGGCCGAATGGAATT 60.124 61.111 30.79 0.00 40.93 2.17
124 125 1.149627 CCCGGGCCGAATGGAATTA 59.850 57.895 30.79 0.00 36.07 1.40
125 126 0.251165 CCCGGGCCGAATGGAATTAT 60.251 55.000 30.79 0.00 36.07 1.28
126 127 1.165270 CCGGGCCGAATGGAATTATC 58.835 55.000 30.79 0.00 36.07 1.75
127 128 1.544537 CCGGGCCGAATGGAATTATCA 60.545 52.381 30.79 0.00 36.07 2.15
128 129 1.535462 CGGGCCGAATGGAATTATCAC 59.465 52.381 24.41 0.00 36.07 3.06
129 130 2.810400 CGGGCCGAATGGAATTATCACT 60.810 50.000 24.41 0.00 36.07 3.41
130 131 2.814336 GGGCCGAATGGAATTATCACTC 59.186 50.000 0.00 0.00 36.07 3.51
131 132 3.496870 GGGCCGAATGGAATTATCACTCT 60.497 47.826 0.00 0.00 36.07 3.24
132 133 4.262894 GGGCCGAATGGAATTATCACTCTA 60.263 45.833 0.00 0.00 36.07 2.43
133 134 4.932200 GGCCGAATGGAATTATCACTCTAG 59.068 45.833 0.00 0.00 36.07 2.43
134 135 4.390297 GCCGAATGGAATTATCACTCTAGC 59.610 45.833 0.00 0.00 36.07 3.42
135 136 5.788450 CCGAATGGAATTATCACTCTAGCT 58.212 41.667 0.00 0.00 36.07 3.32
136 137 6.572509 GCCGAATGGAATTATCACTCTAGCTA 60.573 42.308 0.00 0.00 36.07 3.32
137 138 7.032580 CCGAATGGAATTATCACTCTAGCTAG 58.967 42.308 15.01 15.01 36.07 3.42
138 139 7.309499 CCGAATGGAATTATCACTCTAGCTAGT 60.309 40.741 20.10 1.46 36.07 2.57
139 140 7.540400 CGAATGGAATTATCACTCTAGCTAGTG 59.460 40.741 20.10 19.46 42.01 2.74
147 148 2.853705 ACTCTAGCTAGTGATCCGGAC 58.146 52.381 25.55 0.90 0.00 4.79
148 149 2.172930 ACTCTAGCTAGTGATCCGGACA 59.827 50.000 25.55 4.15 0.00 4.02
149 150 3.181438 ACTCTAGCTAGTGATCCGGACAT 60.181 47.826 25.55 0.00 0.00 3.06
150 151 4.041815 ACTCTAGCTAGTGATCCGGACATA 59.958 45.833 25.55 0.00 0.00 2.29
151 152 4.580868 TCTAGCTAGTGATCCGGACATAG 58.419 47.826 20.10 7.99 0.00 2.23
152 153 1.889829 AGCTAGTGATCCGGACATAGC 59.110 52.381 22.26 22.26 36.69 2.97
153 154 1.613925 GCTAGTGATCCGGACATAGCA 59.386 52.381 23.74 10.19 36.50 3.49
154 155 2.608261 GCTAGTGATCCGGACATAGCAC 60.608 54.545 23.74 18.49 36.50 4.40
155 156 1.781786 AGTGATCCGGACATAGCACT 58.218 50.000 6.12 12.79 0.00 4.40
156 157 1.683917 AGTGATCCGGACATAGCACTC 59.316 52.381 6.12 0.00 31.54 3.51
157 158 1.040646 TGATCCGGACATAGCACTCC 58.959 55.000 6.12 0.00 0.00 3.85
159 160 2.088674 ATCCGGACATAGCACTCCGC 62.089 60.000 6.12 0.00 46.83 5.54
168 169 4.736631 GCACTCCGCGCCGAAAAC 62.737 66.667 0.00 0.00 0.00 2.43
169 170 3.342627 CACTCCGCGCCGAAAACA 61.343 61.111 0.00 0.00 0.00 2.83
170 171 2.589442 ACTCCGCGCCGAAAACAA 60.589 55.556 0.00 0.00 0.00 2.83
171 172 2.173382 CTCCGCGCCGAAAACAAG 59.827 61.111 0.00 0.00 0.00 3.16
172 173 2.280254 TCCGCGCCGAAAACAAGA 60.280 55.556 0.00 0.00 0.00 3.02
173 174 2.127383 CCGCGCCGAAAACAAGAC 60.127 61.111 0.00 0.00 0.00 3.01
174 175 2.496794 CGCGCCGAAAACAAGACG 60.497 61.111 0.00 0.00 0.00 4.18
178 179 2.554272 CCGAAAACAAGACGGCCG 59.446 61.111 26.86 26.86 40.19 6.13
179 180 2.127383 CGAAAACAAGACGGCCGC 60.127 61.111 28.58 18.62 0.00 6.53
180 181 2.887889 CGAAAACAAGACGGCCGCA 61.888 57.895 28.58 0.00 0.00 5.69
181 182 1.579429 GAAAACAAGACGGCCGCAT 59.421 52.632 28.58 11.77 0.00 4.73
182 183 0.039527 GAAAACAAGACGGCCGCATT 60.040 50.000 28.58 18.00 0.00 3.56
183 184 1.198178 GAAAACAAGACGGCCGCATTA 59.802 47.619 28.58 0.00 0.00 1.90
184 185 0.802494 AAACAAGACGGCCGCATTAG 59.198 50.000 28.58 14.45 0.00 1.73
185 186 1.644786 AACAAGACGGCCGCATTAGC 61.645 55.000 28.58 7.87 37.42 3.09
191 192 2.124320 GGCCGCATTAGCCCTTGA 60.124 61.111 0.00 0.00 45.16 3.02
192 193 2.189499 GGCCGCATTAGCCCTTGAG 61.189 63.158 0.00 0.00 45.16 3.02
193 194 2.189499 GCCGCATTAGCCCTTGAGG 61.189 63.158 0.00 0.00 37.52 3.86
202 203 2.029666 CCCTTGAGGCGCTATCCG 59.970 66.667 7.64 0.30 40.75 4.18
203 204 2.498941 CCCTTGAGGCGCTATCCGA 61.499 63.158 7.64 0.00 40.02 4.55
204 205 1.441729 CCTTGAGGCGCTATCCGAA 59.558 57.895 7.64 0.00 40.02 4.30
205 206 0.598680 CCTTGAGGCGCTATCCGAAG 60.599 60.000 7.64 6.79 40.02 3.79
206 207 1.218230 CTTGAGGCGCTATCCGAAGC 61.218 60.000 7.64 0.00 40.02 3.86
209 210 2.109181 GGCGCTATCCGAAGCCTT 59.891 61.111 7.64 0.00 45.67 4.35
210 211 1.366366 GGCGCTATCCGAAGCCTTA 59.634 57.895 7.64 0.00 45.67 2.69
211 212 0.037232 GGCGCTATCCGAAGCCTTAT 60.037 55.000 7.64 0.00 45.67 1.73
212 213 1.608283 GGCGCTATCCGAAGCCTTATT 60.608 52.381 7.64 0.00 45.67 1.40
213 214 1.461127 GCGCTATCCGAAGCCTTATTG 59.539 52.381 0.00 0.00 39.43 1.90
214 215 2.866460 GCGCTATCCGAAGCCTTATTGA 60.866 50.000 0.00 0.00 39.43 2.57
215 216 3.390135 CGCTATCCGAAGCCTTATTGAA 58.610 45.455 0.00 0.00 39.43 2.69
216 217 3.807622 CGCTATCCGAAGCCTTATTGAAA 59.192 43.478 0.00 0.00 39.43 2.69
217 218 4.452455 CGCTATCCGAAGCCTTATTGAAAT 59.548 41.667 0.00 0.00 39.43 2.17
218 219 5.049405 CGCTATCCGAAGCCTTATTGAAATT 60.049 40.000 0.00 0.00 39.43 1.82
219 220 6.513393 CGCTATCCGAAGCCTTATTGAAATTT 60.513 38.462 0.00 0.00 39.43 1.82
220 221 7.203218 GCTATCCGAAGCCTTATTGAAATTTT 58.797 34.615 0.00 0.00 36.45 1.82
221 222 8.349983 GCTATCCGAAGCCTTATTGAAATTTTA 58.650 33.333 0.00 0.00 36.45 1.52
224 225 7.712797 TCCGAAGCCTTATTGAAATTTTATCC 58.287 34.615 0.00 0.00 0.00 2.59
225 226 6.636850 CCGAAGCCTTATTGAAATTTTATCCG 59.363 38.462 0.00 0.00 0.00 4.18
226 227 7.414436 CGAAGCCTTATTGAAATTTTATCCGA 58.586 34.615 0.00 0.00 0.00 4.55
227 228 8.076178 CGAAGCCTTATTGAAATTTTATCCGAT 58.924 33.333 0.00 0.00 0.00 4.18
228 229 9.185192 GAAGCCTTATTGAAATTTTATCCGATG 57.815 33.333 0.00 0.00 0.00 3.84
229 230 7.661040 AGCCTTATTGAAATTTTATCCGATGG 58.339 34.615 0.00 0.00 0.00 3.51
230 231 6.366061 GCCTTATTGAAATTTTATCCGATGGC 59.634 38.462 0.00 0.00 0.00 4.40
231 232 6.868339 CCTTATTGAAATTTTATCCGATGGCC 59.132 38.462 0.00 0.00 0.00 5.36
232 233 3.980646 TGAAATTTTATCCGATGGCCG 57.019 42.857 0.00 0.00 38.18 6.13
233 234 3.546724 TGAAATTTTATCCGATGGCCGA 58.453 40.909 0.00 0.00 41.76 5.54
234 235 3.563808 TGAAATTTTATCCGATGGCCGAG 59.436 43.478 0.00 0.00 41.76 4.63
235 236 2.185004 ATTTTATCCGATGGCCGAGG 57.815 50.000 0.00 0.59 41.76 4.63
236 237 0.834612 TTTTATCCGATGGCCGAGGT 59.165 50.000 10.24 2.25 41.76 3.85
237 238 0.834612 TTTATCCGATGGCCGAGGTT 59.165 50.000 10.24 5.53 41.76 3.50
238 239 0.105964 TTATCCGATGGCCGAGGTTG 59.894 55.000 10.24 0.00 41.76 3.77
239 240 0.757561 TATCCGATGGCCGAGGTTGA 60.758 55.000 10.24 0.00 41.76 3.18
240 241 1.410850 ATCCGATGGCCGAGGTTGAT 61.411 55.000 10.24 0.00 41.76 2.57
241 242 1.153168 CCGATGGCCGAGGTTGATT 60.153 57.895 0.00 0.00 41.76 2.57
242 243 1.439353 CCGATGGCCGAGGTTGATTG 61.439 60.000 0.00 0.00 41.76 2.67
243 244 1.439353 CGATGGCCGAGGTTGATTGG 61.439 60.000 0.00 0.00 41.76 3.16
244 245 1.076777 ATGGCCGAGGTTGATTGGG 60.077 57.895 0.00 0.00 0.00 4.12
245 246 1.863155 ATGGCCGAGGTTGATTGGGT 61.863 55.000 0.00 0.00 0.00 4.51
246 247 1.202099 TGGCCGAGGTTGATTGGGTA 61.202 55.000 0.00 0.00 0.00 3.69
247 248 0.034863 GGCCGAGGTTGATTGGGTAA 60.035 55.000 0.00 0.00 0.00 2.85
248 249 1.614850 GGCCGAGGTTGATTGGGTAAA 60.615 52.381 0.00 0.00 0.00 2.01
249 250 2.375146 GCCGAGGTTGATTGGGTAAAT 58.625 47.619 0.00 0.00 0.00 1.40
250 251 3.547746 GCCGAGGTTGATTGGGTAAATA 58.452 45.455 0.00 0.00 0.00 1.40
251 252 4.142038 GCCGAGGTTGATTGGGTAAATAT 58.858 43.478 0.00 0.00 0.00 1.28
252 253 4.215613 GCCGAGGTTGATTGGGTAAATATC 59.784 45.833 0.00 0.00 0.00 1.63
253 254 4.760204 CCGAGGTTGATTGGGTAAATATCC 59.240 45.833 0.00 0.00 0.00 2.59
254 255 5.373222 CGAGGTTGATTGGGTAAATATCCA 58.627 41.667 0.00 0.00 33.85 3.41
264 265 4.798882 GGGTAAATATCCAATGACCCACA 58.201 43.478 2.98 0.00 45.02 4.17
265 266 5.205056 GGGTAAATATCCAATGACCCACAA 58.795 41.667 2.98 0.00 45.02 3.33
266 267 5.068591 GGGTAAATATCCAATGACCCACAAC 59.931 44.000 2.98 0.00 45.02 3.32
267 268 5.654650 GGTAAATATCCAATGACCCACAACA 59.345 40.000 0.00 0.00 0.00 3.33
268 269 6.153680 GGTAAATATCCAATGACCCACAACAA 59.846 38.462 0.00 0.00 0.00 2.83
269 270 6.872585 AAATATCCAATGACCCACAACAAT 57.127 33.333 0.00 0.00 0.00 2.71
270 271 6.872585 AATATCCAATGACCCACAACAATT 57.127 33.333 0.00 0.00 0.00 2.32
271 272 6.872585 ATATCCAATGACCCACAACAATTT 57.127 33.333 0.00 0.00 0.00 1.82
272 273 4.333913 TCCAATGACCCACAACAATTTG 57.666 40.909 0.00 0.00 38.83 2.32
273 274 3.070734 TCCAATGACCCACAACAATTTGG 59.929 43.478 0.78 0.00 37.00 3.28
277 278 3.883997 CCCACAACAATTTGGGTCG 57.116 52.632 4.92 0.00 46.74 4.79
278 279 1.323412 CCCACAACAATTTGGGTCGA 58.677 50.000 4.92 0.00 46.74 4.20
279 280 1.269448 CCCACAACAATTTGGGTCGAG 59.731 52.381 4.92 0.00 46.74 4.04
280 281 2.226330 CCACAACAATTTGGGTCGAGA 58.774 47.619 0.78 0.00 33.84 4.04
281 282 2.819608 CCACAACAATTTGGGTCGAGAT 59.180 45.455 0.78 0.00 33.84 2.75
282 283 3.119849 CCACAACAATTTGGGTCGAGATC 60.120 47.826 0.78 0.00 33.84 2.75
283 284 3.081804 ACAACAATTTGGGTCGAGATCC 58.918 45.455 0.78 0.00 37.00 3.36
284 285 2.024176 ACAATTTGGGTCGAGATCCG 57.976 50.000 0.78 0.00 33.09 4.18
285 286 1.553248 ACAATTTGGGTCGAGATCCGA 59.447 47.619 0.78 2.65 46.35 4.55
286 287 7.828582 ACAACAATTTGGGTCGAGATCCGAT 62.829 44.000 9.09 0.00 42.40 4.18
293 294 3.496675 TCGAGATCCGATGGTCTGT 57.503 52.632 2.65 0.00 43.23 3.41
294 295 1.025041 TCGAGATCCGATGGTCTGTG 58.975 55.000 2.65 0.00 43.23 3.66
295 296 0.741326 CGAGATCCGATGGTCTGTGT 59.259 55.000 0.00 0.00 41.76 3.72
296 297 1.268794 CGAGATCCGATGGTCTGTGTC 60.269 57.143 0.00 0.00 41.76 3.67
297 298 1.751351 GAGATCCGATGGTCTGTGTCA 59.249 52.381 0.00 0.00 0.00 3.58
298 299 1.478510 AGATCCGATGGTCTGTGTCAC 59.521 52.381 0.00 0.00 0.00 3.67
299 300 1.204704 GATCCGATGGTCTGTGTCACA 59.795 52.381 5.36 5.36 0.00 3.58
300 301 1.044611 TCCGATGGTCTGTGTCACAA 58.955 50.000 7.18 0.00 0.00 3.33
301 302 1.623311 TCCGATGGTCTGTGTCACAAT 59.377 47.619 7.18 0.00 0.00 2.71
302 303 1.733912 CCGATGGTCTGTGTCACAATG 59.266 52.381 7.18 0.00 0.00 2.82
303 304 2.612721 CCGATGGTCTGTGTCACAATGA 60.613 50.000 7.18 0.00 0.00 2.57
304 305 2.669924 CGATGGTCTGTGTCACAATGAG 59.330 50.000 7.18 0.00 0.00 2.90
305 306 3.614870 CGATGGTCTGTGTCACAATGAGA 60.615 47.826 7.18 0.00 0.00 3.27
306 307 4.511527 GATGGTCTGTGTCACAATGAGAT 58.488 43.478 7.18 0.00 0.00 2.75
307 308 4.356405 TGGTCTGTGTCACAATGAGATT 57.644 40.909 7.18 0.00 0.00 2.40
308 309 4.318332 TGGTCTGTGTCACAATGAGATTC 58.682 43.478 7.18 0.00 0.00 2.52
309 310 3.686726 GGTCTGTGTCACAATGAGATTCC 59.313 47.826 7.18 0.00 0.00 3.01
310 311 3.369147 GTCTGTGTCACAATGAGATTCCG 59.631 47.826 7.18 0.00 0.00 4.30
311 312 3.258123 TCTGTGTCACAATGAGATTCCGA 59.742 43.478 7.18 0.00 0.00 4.55
312 313 4.081476 TCTGTGTCACAATGAGATTCCGAT 60.081 41.667 7.18 0.00 0.00 4.18
313 314 4.183865 TGTGTCACAATGAGATTCCGATC 58.816 43.478 2.31 0.00 0.00 3.69
314 315 4.081476 TGTGTCACAATGAGATTCCGATCT 60.081 41.667 2.31 0.00 45.27 2.75
315 316 4.269603 GTGTCACAATGAGATTCCGATCTG 59.730 45.833 0.00 0.00 42.66 2.90
316 317 4.160252 TGTCACAATGAGATTCCGATCTGA 59.840 41.667 0.00 0.00 42.66 3.27
317 318 4.505922 GTCACAATGAGATTCCGATCTGAC 59.494 45.833 0.00 0.00 42.66 3.51
318 319 4.160252 TCACAATGAGATTCCGATCTGACA 59.840 41.667 0.00 0.00 42.66 3.58
319 320 4.507021 CACAATGAGATTCCGATCTGACAG 59.493 45.833 0.00 0.00 42.66 3.51
320 321 4.403752 ACAATGAGATTCCGATCTGACAGA 59.596 41.667 7.80 7.80 42.66 3.41
321 322 5.070180 ACAATGAGATTCCGATCTGACAGAT 59.930 40.000 17.98 17.98 42.66 2.90
322 323 4.581077 TGAGATTCCGATCTGACAGATG 57.419 45.455 22.64 13.75 42.66 2.90
323 324 4.210331 TGAGATTCCGATCTGACAGATGA 58.790 43.478 22.64 11.58 42.66 2.92
324 325 4.646492 TGAGATTCCGATCTGACAGATGAA 59.354 41.667 22.64 18.97 42.66 2.57
325 326 5.127682 TGAGATTCCGATCTGACAGATGAAA 59.872 40.000 22.64 13.07 42.66 2.69
326 327 5.982356 AGATTCCGATCTGACAGATGAAAA 58.018 37.500 22.64 12.75 41.09 2.29
327 328 6.590068 AGATTCCGATCTGACAGATGAAAAT 58.410 36.000 22.64 16.37 41.09 1.82
328 329 6.705381 AGATTCCGATCTGACAGATGAAAATC 59.295 38.462 22.64 22.11 41.09 2.17
329 330 4.697514 TCCGATCTGACAGATGAAAATCC 58.302 43.478 22.64 5.43 34.53 3.01
330 331 4.162131 TCCGATCTGACAGATGAAAATCCA 59.838 41.667 22.64 0.00 34.53 3.41
331 332 4.877823 CCGATCTGACAGATGAAAATCCAA 59.122 41.667 22.64 0.00 34.53 3.53
332 333 5.355071 CCGATCTGACAGATGAAAATCCAAA 59.645 40.000 22.64 0.00 34.53 3.28
333 334 6.457934 CCGATCTGACAGATGAAAATCCAAAG 60.458 42.308 22.64 0.00 34.53 2.77
334 335 5.633830 TCTGACAGATGAAAATCCAAAGC 57.366 39.130 0.00 0.00 0.00 3.51
335 336 4.154737 TCTGACAGATGAAAATCCAAAGCG 59.845 41.667 0.00 0.00 0.00 4.68
336 337 3.174375 GACAGATGAAAATCCAAAGCGC 58.826 45.455 0.00 0.00 0.00 5.92
337 338 2.821969 ACAGATGAAAATCCAAAGCGCT 59.178 40.909 2.64 2.64 0.00 5.92
338 339 3.176708 CAGATGAAAATCCAAAGCGCTG 58.823 45.455 12.58 0.00 0.00 5.18
339 340 3.084039 AGATGAAAATCCAAAGCGCTGA 58.916 40.909 12.58 4.02 0.00 4.26
340 341 2.995466 TGAAAATCCAAAGCGCTGAG 57.005 45.000 12.58 6.52 0.00 3.35
341 342 1.541147 TGAAAATCCAAAGCGCTGAGG 59.459 47.619 12.58 16.97 0.00 3.86
342 343 1.812571 GAAAATCCAAAGCGCTGAGGA 59.187 47.619 27.19 27.19 34.12 3.71
343 344 1.457346 AAATCCAAAGCGCTGAGGAG 58.543 50.000 28.18 11.03 32.91 3.69
344 345 0.393537 AATCCAAAGCGCTGAGGAGG 60.394 55.000 28.18 18.40 32.91 4.30
345 346 2.883267 ATCCAAAGCGCTGAGGAGGC 62.883 60.000 28.18 0.00 32.91 4.70
346 347 2.046507 CAAAGCGCTGAGGAGGCT 60.047 61.111 12.58 0.00 39.01 4.58
347 348 2.105466 CAAAGCGCTGAGGAGGCTC 61.105 63.158 12.58 5.78 35.64 4.70
348 349 3.322318 AAAGCGCTGAGGAGGCTCC 62.322 63.158 26.42 26.42 35.64 4.70
350 351 3.859414 GCGCTGAGGAGGCTCCAT 61.859 66.667 33.86 19.46 39.61 3.41
351 352 2.906458 CGCTGAGGAGGCTCCATT 59.094 61.111 33.86 15.95 39.61 3.16
352 353 1.222936 CGCTGAGGAGGCTCCATTT 59.777 57.895 33.86 15.15 39.61 2.32
353 354 0.393537 CGCTGAGGAGGCTCCATTTT 60.394 55.000 33.86 14.75 39.61 1.82
354 355 1.101331 GCTGAGGAGGCTCCATTTTG 58.899 55.000 33.86 19.11 39.61 2.44
355 356 1.760192 CTGAGGAGGCTCCATTTTGG 58.240 55.000 33.86 14.07 39.61 3.28
356 357 1.005215 CTGAGGAGGCTCCATTTTGGT 59.995 52.381 33.86 12.74 39.61 3.67
357 358 1.428912 TGAGGAGGCTCCATTTTGGTT 59.571 47.619 33.86 11.94 39.61 3.67
358 359 2.095461 GAGGAGGCTCCATTTTGGTTC 58.905 52.381 33.86 16.82 39.61 3.62
359 360 0.811281 GGAGGCTCCATTTTGGTTCG 59.189 55.000 28.55 0.00 39.03 3.95
360 361 0.811281 GAGGCTCCATTTTGGTTCGG 59.189 55.000 2.15 0.00 39.03 4.30
361 362 0.112412 AGGCTCCATTTTGGTTCGGT 59.888 50.000 0.00 0.00 39.03 4.69
362 363 0.526211 GGCTCCATTTTGGTTCGGTC 59.474 55.000 0.00 0.00 39.03 4.79
363 364 1.534729 GCTCCATTTTGGTTCGGTCT 58.465 50.000 0.00 0.00 39.03 3.85
364 365 1.468914 GCTCCATTTTGGTTCGGTCTC 59.531 52.381 0.00 0.00 39.03 3.36
365 366 2.876079 GCTCCATTTTGGTTCGGTCTCT 60.876 50.000 0.00 0.00 39.03 3.10
366 367 3.618997 GCTCCATTTTGGTTCGGTCTCTA 60.619 47.826 0.00 0.00 39.03 2.43
367 368 4.575885 CTCCATTTTGGTTCGGTCTCTAA 58.424 43.478 0.00 0.00 39.03 2.10
368 369 4.320870 TCCATTTTGGTTCGGTCTCTAAC 58.679 43.478 0.00 0.00 39.03 2.34
369 370 4.069304 CCATTTTGGTTCGGTCTCTAACA 58.931 43.478 0.00 0.00 31.35 2.41
370 371 4.517453 CCATTTTGGTTCGGTCTCTAACAA 59.483 41.667 0.00 0.00 31.35 2.83
371 372 5.183140 CCATTTTGGTTCGGTCTCTAACAAT 59.817 40.000 0.00 0.00 31.35 2.71
372 373 5.682943 TTTTGGTTCGGTCTCTAACAATG 57.317 39.130 0.00 0.00 0.00 2.82
373 374 3.328382 TGGTTCGGTCTCTAACAATGG 57.672 47.619 0.00 0.00 0.00 3.16
374 375 2.027561 TGGTTCGGTCTCTAACAATGGG 60.028 50.000 0.00 0.00 0.00 4.00
375 376 2.235402 GGTTCGGTCTCTAACAATGGGA 59.765 50.000 0.00 0.00 0.00 4.37
376 377 3.118371 GGTTCGGTCTCTAACAATGGGAT 60.118 47.826 0.00 0.00 0.00 3.85
377 378 4.514401 GTTCGGTCTCTAACAATGGGATT 58.486 43.478 0.00 0.00 0.00 3.01
378 379 4.402056 TCGGTCTCTAACAATGGGATTC 57.598 45.455 0.00 0.00 0.00 2.52
379 380 3.134081 TCGGTCTCTAACAATGGGATTCC 59.866 47.826 0.00 0.00 0.00 3.01
383 384 5.339200 GGTCTCTAACAATGGGATTCCTTCA 60.339 44.000 2.01 0.00 0.00 3.02
469 475 4.082845 CGTATATCTGGTCTCCATCCACT 58.917 47.826 0.00 0.00 30.82 4.00
473 479 3.404869 TCTGGTCTCCATCCACTGTAT 57.595 47.619 0.00 0.00 30.82 2.29
956 1027 3.376234 GCTGTTTAATCCCGAACTAACCC 59.624 47.826 0.00 0.00 0.00 4.11
968 1039 4.234574 CGAACTAACCCTGGCAAAATTTC 58.765 43.478 0.00 0.00 0.00 2.17
1369 1494 1.722011 ACCGCCGTTTCAGTATCAAG 58.278 50.000 0.00 0.00 0.00 3.02
1370 1495 1.006832 CCGCCGTTTCAGTATCAAGG 58.993 55.000 0.00 0.00 0.00 3.61
1371 1496 1.674817 CCGCCGTTTCAGTATCAAGGT 60.675 52.381 0.00 0.00 0.00 3.50
1372 1497 1.659098 CGCCGTTTCAGTATCAAGGTC 59.341 52.381 0.00 0.00 0.00 3.85
1373 1498 2.695359 GCCGTTTCAGTATCAAGGTCA 58.305 47.619 0.00 0.00 0.00 4.02
1374 1499 2.673368 GCCGTTTCAGTATCAAGGTCAG 59.327 50.000 0.00 0.00 0.00 3.51
1375 1500 2.673368 CCGTTTCAGTATCAAGGTCAGC 59.327 50.000 0.00 0.00 0.00 4.26
1376 1501 3.325870 CGTTTCAGTATCAAGGTCAGCA 58.674 45.455 0.00 0.00 0.00 4.41
1377 1502 3.745975 CGTTTCAGTATCAAGGTCAGCAA 59.254 43.478 0.00 0.00 0.00 3.91
1378 1503 4.143030 CGTTTCAGTATCAAGGTCAGCAAG 60.143 45.833 0.00 0.00 0.00 4.01
1379 1504 2.977914 TCAGTATCAAGGTCAGCAAGC 58.022 47.619 0.00 0.00 0.00 4.01
1380 1505 2.302733 TCAGTATCAAGGTCAGCAAGCA 59.697 45.455 0.00 0.00 0.00 3.91
1381 1506 2.417933 CAGTATCAAGGTCAGCAAGCAC 59.582 50.000 0.00 0.00 0.00 4.40
1382 1507 2.038952 AGTATCAAGGTCAGCAAGCACA 59.961 45.455 0.00 0.00 0.00 4.57
1383 1508 1.531423 ATCAAGGTCAGCAAGCACAG 58.469 50.000 0.00 0.00 0.00 3.66
1384 1509 1.168407 TCAAGGTCAGCAAGCACAGC 61.168 55.000 0.00 0.00 0.00 4.40
1385 1510 1.152902 AAGGTCAGCAAGCACAGCA 60.153 52.632 0.00 0.00 0.00 4.41
1386 1511 0.752743 AAGGTCAGCAAGCACAGCAA 60.753 50.000 0.00 0.00 0.00 3.91
1387 1512 1.008079 GGTCAGCAAGCACAGCAAC 60.008 57.895 0.00 0.00 0.00 4.17
1388 1513 1.008079 GTCAGCAAGCACAGCAACC 60.008 57.895 0.00 0.00 0.00 3.77
1389 1514 2.050714 CAGCAAGCACAGCAACCG 60.051 61.111 0.00 0.00 0.00 4.44
1390 1515 3.969802 AGCAAGCACAGCAACCGC 61.970 61.111 0.00 0.00 38.99 5.68
1402 1527 2.527442 GCAACCGCTGTTTCAGTATC 57.473 50.000 0.00 0.00 33.43 2.24
1403 1528 1.804151 GCAACCGCTGTTTCAGTATCA 59.196 47.619 0.00 0.00 33.43 2.15
1404 1529 2.225491 GCAACCGCTGTTTCAGTATCAA 59.775 45.455 0.00 0.00 33.43 2.57
1450 1575 1.799258 GCAAGGGTCACAACAGCCAG 61.799 60.000 0.00 0.00 36.28 4.85
1542 1667 5.106277 CCAGCAGCAATATTCATATCAGGTG 60.106 44.000 0.00 0.00 33.30 4.00
1561 1686 3.053828 GCCAGCAGCCACAAATGT 58.946 55.556 0.00 0.00 34.35 2.71
2288 2413 2.954318 GCGGAGTGGATACTAACTACCA 59.046 50.000 0.00 0.00 37.25 3.25
3177 3305 6.530120 TGTTGCCTTCTGAACTATAGTTGAA 58.470 36.000 22.68 17.74 38.56 2.69
3454 3594 3.872511 TCTGCAGTTGGCCATAAATTG 57.127 42.857 14.67 0.00 43.89 2.32
3922 4062 5.169992 ACCCTAATTTAACTAGTGCCGTT 57.830 39.130 0.00 0.00 0.00 4.44
3924 4064 6.108687 ACCCTAATTTAACTAGTGCCGTTAC 58.891 40.000 0.00 0.00 0.00 2.50
3963 4103 5.954335 ACATACTTGTTGCTATTTTCTGCC 58.046 37.500 0.00 0.00 29.55 4.85
4132 4272 6.787199 GCAATTAGCTTTTCTTTCTCATCG 57.213 37.500 0.00 0.00 41.15 3.84
4286 4426 4.621991 ACATAGTAGCTATTGCCAAGACG 58.378 43.478 0.00 0.00 40.80 4.18
4753 5024 5.640783 TGCAATGTAGACAGTTGATTCTCAG 59.359 40.000 0.00 0.00 0.00 3.35
4849 5120 6.293027 CCTTTTTGCCTTTAAGAAATGTGCTG 60.293 38.462 0.00 0.00 0.00 4.41
5292 5563 5.104569 TCACACAGGTATTCATATGGCTTCA 60.105 40.000 2.13 0.00 0.00 3.02
5293 5564 5.766670 CACACAGGTATTCATATGGCTTCAT 59.233 40.000 2.13 0.00 35.02 2.57
5321 5592 2.681848 CCATGCTTTTGTTTGTTTGCCA 59.318 40.909 0.00 0.00 0.00 4.92
5461 5735 3.681034 GCTTGGAGCAGATTCTTAGAGCA 60.681 47.826 0.00 0.00 41.89 4.26
5947 6221 2.694628 TGCTGCTGATTTGGTGAAAGTT 59.305 40.909 0.00 0.00 0.00 2.66
6064 6338 0.107165 GTTGGGATAGTCCTGGTGGC 60.107 60.000 0.00 0.00 36.57 5.01
6101 6375 4.974721 CTGTTGGCGGCCCTGGTT 62.975 66.667 17.97 0.00 0.00 3.67
6343 6671 1.203125 GGTGGATTTGGTGGAAGGGAA 60.203 52.381 0.00 0.00 0.00 3.97
6991 7319 0.384309 TACCTAGACAATCGCTGGCG 59.616 55.000 8.80 8.80 38.56 5.69
7134 7462 3.243569 GCGACTGATCTAGCAATACCACT 60.244 47.826 0.00 0.00 0.00 4.00
7148 7476 0.761187 ACCACTGAGCTTCTCTGCAA 59.239 50.000 0.00 0.00 33.65 4.08
7256 7584 7.758076 CGAGTTTGTTCTGTCCATTATGTACTA 59.242 37.037 0.00 0.00 0.00 1.82
7302 7630 4.612943 GCTTATCGCTGCTAAGTTCTACT 58.387 43.478 9.52 0.00 35.14 2.57
7304 7632 5.578005 TTATCGCTGCTAAGTTCTACTGT 57.422 39.130 0.00 0.00 0.00 3.55
7313 7641 5.127194 TGCTAAGTTCTACTGTCGGATGATT 59.873 40.000 0.00 0.00 0.00 2.57
7314 7642 5.460419 GCTAAGTTCTACTGTCGGATGATTG 59.540 44.000 0.00 0.00 0.00 2.67
7374 7702 7.604927 TGTACTGAACATAATCCAACCAAGTAC 59.395 37.037 0.00 0.00 31.43 2.73
7376 7704 6.655003 ACTGAACATAATCCAACCAAGTACAG 59.345 38.462 0.00 0.00 0.00 2.74
7399 7727 1.068402 TGAACGAACTGCAATGCCATG 60.068 47.619 1.53 0.00 0.00 3.66
7401 7729 1.819928 ACGAACTGCAATGCCATGTA 58.180 45.000 1.53 0.00 0.00 2.29
7430 7758 8.612619 AGTCACACTACTTTGTCATTTTACTTG 58.387 33.333 0.00 0.00 0.00 3.16
7431 7759 7.376072 GTCACACTACTTTGTCATTTTACTTGC 59.624 37.037 0.00 0.00 0.00 4.01
7432 7760 7.282224 TCACACTACTTTGTCATTTTACTTGCT 59.718 33.333 0.00 0.00 0.00 3.91
7440 7768 7.936496 TTGTCATTTTACTTGCTATCCATGA 57.064 32.000 0.00 0.00 0.00 3.07
7486 7814 4.520492 AGGACATTTGTCAAAGCTACTTGG 59.480 41.667 12.43 0.00 46.47 3.61
7489 7817 4.278419 ACATTTGTCAAAGCTACTTGGTCC 59.722 41.667 4.03 0.00 0.00 4.46
7491 7819 1.414919 TGTCAAAGCTACTTGGTCCGT 59.585 47.619 0.00 0.00 0.00 4.69
7542 7871 4.730657 CTGGACAGAGCAAATTGTCAATC 58.269 43.478 0.00 0.00 44.23 2.67
7561 7890 6.791775 GTCAATCCATTTGAAATTTGAAACGC 59.208 34.615 4.89 0.00 45.71 4.84
7570 7899 7.721286 TTGAAATTTGAAACGCATAAATGGT 57.279 28.000 0.00 0.00 0.00 3.55
7625 7954 2.493278 GGTACAGGGAAGTGCGTACTTA 59.507 50.000 19.21 0.00 46.79 2.24
7657 7988 7.390918 GCATCTGCACTGAAATATTGAAATC 57.609 36.000 0.00 0.00 41.59 2.17
7694 8026 6.869695 TCCGCAAATCTTGTTCTGTATACTA 58.130 36.000 4.17 0.00 0.00 1.82
7766 8102 5.298347 GTTTTCTGTTGAGTAGCTGTACCT 58.702 41.667 0.00 0.00 0.00 3.08
7767 8103 5.546621 TTTCTGTTGAGTAGCTGTACCTT 57.453 39.130 0.00 0.00 0.00 3.50
7768 8104 5.546621 TTCTGTTGAGTAGCTGTACCTTT 57.453 39.130 0.00 0.00 0.00 3.11
7769 8105 6.659745 TTCTGTTGAGTAGCTGTACCTTTA 57.340 37.500 0.00 0.00 0.00 1.85
7770 8106 6.022163 TCTGTTGAGTAGCTGTACCTTTAC 57.978 41.667 0.00 0.00 0.00 2.01
7771 8107 5.047519 TCTGTTGAGTAGCTGTACCTTTACC 60.048 44.000 0.00 0.00 0.00 2.85
7775 8111 6.034161 TGAGTAGCTGTACCTTTACCTTTC 57.966 41.667 0.00 0.00 0.00 2.62
7821 8157 8.506196 AATGGTCATGTACTAGGTTATGGTAT 57.494 34.615 0.00 0.00 0.00 2.73
7827 8163 9.006839 TCATGTACTAGGTTATGGTATAACGAG 57.993 37.037 0.00 7.68 0.00 4.18
7839 8175 5.263599 TGGTATAACGAGAAGAGTTGGGTA 58.736 41.667 0.00 0.00 33.42 3.69
7890 8227 1.814394 TGGTTCTTGTGCATGATGCTC 59.186 47.619 19.19 15.53 45.31 4.26
7939 8276 2.651361 CGCAGAGGTGGACGAGTT 59.349 61.111 0.00 0.00 0.00 3.01
8033 8377 8.637986 TGATATAATTACAAAGGTTGCCAATCC 58.362 33.333 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.107901 TCTTAAACGGGGCCACCTAAAA 59.892 45.455 4.39 0.00 36.97 1.52
4 5 0.906775 CTCTTAAACGGGGCCACCTA 59.093 55.000 4.39 0.00 36.97 3.08
5 6 1.683441 CTCTTAAACGGGGCCACCT 59.317 57.895 4.39 0.00 36.97 4.00
6 7 2.044555 GCTCTTAAACGGGGCCACC 61.045 63.158 4.39 1.95 0.00 4.61
7 8 2.396157 CGCTCTTAAACGGGGCCAC 61.396 63.158 4.39 0.00 0.00 5.01
8 9 2.046700 CGCTCTTAAACGGGGCCA 60.047 61.111 4.39 0.00 0.00 5.36
9 10 2.822701 CCGCTCTTAAACGGGGCC 60.823 66.667 0.00 0.00 45.74 5.80
24 25 4.159857 GCTCTAGTAAAGCGTGATATCCG 58.840 47.826 0.00 4.84 0.00 4.18
34 35 1.134788 TGCTTCCCGCTCTAGTAAAGC 60.135 52.381 0.00 0.00 39.55 3.51
35 36 2.961526 TGCTTCCCGCTCTAGTAAAG 57.038 50.000 0.00 0.00 40.11 1.85
36 37 3.196901 TGAATGCTTCCCGCTCTAGTAAA 59.803 43.478 0.00 0.00 40.11 2.01
37 38 2.764010 TGAATGCTTCCCGCTCTAGTAA 59.236 45.455 0.00 0.00 40.11 2.24
38 39 2.100916 GTGAATGCTTCCCGCTCTAGTA 59.899 50.000 0.00 0.00 40.11 1.82
39 40 1.134670 GTGAATGCTTCCCGCTCTAGT 60.135 52.381 0.00 0.00 40.11 2.57
40 41 1.134699 TGTGAATGCTTCCCGCTCTAG 60.135 52.381 0.00 0.00 40.11 2.43
41 42 0.901827 TGTGAATGCTTCCCGCTCTA 59.098 50.000 0.00 0.00 40.11 2.43
42 43 0.036732 TTGTGAATGCTTCCCGCTCT 59.963 50.000 0.00 0.00 40.11 4.09
43 44 1.098050 ATTGTGAATGCTTCCCGCTC 58.902 50.000 0.00 0.00 40.11 5.03
44 45 1.549203 AATTGTGAATGCTTCCCGCT 58.451 45.000 0.00 0.00 40.11 5.52
45 46 2.368655 AAATTGTGAATGCTTCCCGC 57.631 45.000 0.00 0.00 39.77 6.13
46 47 3.253230 GGAAAATTGTGAATGCTTCCCG 58.747 45.455 0.00 0.00 31.87 5.14
47 48 4.270245 TGGAAAATTGTGAATGCTTCCC 57.730 40.909 0.00 0.00 34.82 3.97
48 49 4.152938 GCTTGGAAAATTGTGAATGCTTCC 59.847 41.667 0.00 0.00 35.64 3.46
49 50 4.751098 TGCTTGGAAAATTGTGAATGCTTC 59.249 37.500 0.00 0.00 0.00 3.86
50 51 4.706035 TGCTTGGAAAATTGTGAATGCTT 58.294 34.783 0.00 0.00 0.00 3.91
51 52 4.339872 TGCTTGGAAAATTGTGAATGCT 57.660 36.364 0.00 0.00 0.00 3.79
52 53 5.616488 ATTGCTTGGAAAATTGTGAATGC 57.384 34.783 0.00 0.00 0.00 3.56
53 54 6.092533 GGGTATTGCTTGGAAAATTGTGAATG 59.907 38.462 0.00 0.00 0.00 2.67
54 55 6.172630 GGGTATTGCTTGGAAAATTGTGAAT 58.827 36.000 0.00 0.00 0.00 2.57
55 56 5.512232 GGGGTATTGCTTGGAAAATTGTGAA 60.512 40.000 0.00 0.00 0.00 3.18
56 57 4.020662 GGGGTATTGCTTGGAAAATTGTGA 60.021 41.667 0.00 0.00 0.00 3.58
57 58 4.252878 GGGGTATTGCTTGGAAAATTGTG 58.747 43.478 0.00 0.00 0.00 3.33
58 59 3.906846 TGGGGTATTGCTTGGAAAATTGT 59.093 39.130 0.00 0.00 0.00 2.71
59 60 4.550076 TGGGGTATTGCTTGGAAAATTG 57.450 40.909 0.00 0.00 0.00 2.32
60 61 5.777526 AATGGGGTATTGCTTGGAAAATT 57.222 34.783 0.00 0.00 0.00 1.82
61 62 5.163457 CGTAATGGGGTATTGCTTGGAAAAT 60.163 40.000 0.00 0.00 30.16 1.82
62 63 4.158764 CGTAATGGGGTATTGCTTGGAAAA 59.841 41.667 0.00 0.00 30.16 2.29
63 64 3.697045 CGTAATGGGGTATTGCTTGGAAA 59.303 43.478 0.00 0.00 30.16 3.13
64 65 3.283751 CGTAATGGGGTATTGCTTGGAA 58.716 45.455 0.00 0.00 30.16 3.53
65 66 2.422235 CCGTAATGGGGTATTGCTTGGA 60.422 50.000 0.00 0.00 30.16 3.53
66 67 1.953686 CCGTAATGGGGTATTGCTTGG 59.046 52.381 0.00 0.00 30.16 3.61
78 79 3.553828 ACCTTCATGTACCCGTAATGG 57.446 47.619 0.00 0.00 37.55 3.16
79 80 6.342906 TCTTAACCTTCATGTACCCGTAATG 58.657 40.000 0.00 0.00 0.00 1.90
80 81 6.549433 TCTTAACCTTCATGTACCCGTAAT 57.451 37.500 0.00 0.00 0.00 1.89
81 82 5.999205 TCTTAACCTTCATGTACCCGTAA 57.001 39.130 0.00 0.00 0.00 3.18
82 83 5.682990 GCATCTTAACCTTCATGTACCCGTA 60.683 44.000 0.00 0.00 0.00 4.02
83 84 4.766375 CATCTTAACCTTCATGTACCCGT 58.234 43.478 0.00 0.00 0.00 5.28
84 85 3.560068 GCATCTTAACCTTCATGTACCCG 59.440 47.826 0.00 0.00 0.00 5.28
85 86 3.883489 GGCATCTTAACCTTCATGTACCC 59.117 47.826 0.00 0.00 0.00 3.69
86 87 3.883489 GGGCATCTTAACCTTCATGTACC 59.117 47.826 0.00 0.00 0.00 3.34
87 88 3.560068 CGGGCATCTTAACCTTCATGTAC 59.440 47.826 0.00 0.00 0.00 2.90
88 89 3.433031 CCGGGCATCTTAACCTTCATGTA 60.433 47.826 0.00 0.00 0.00 2.29
89 90 2.643551 CGGGCATCTTAACCTTCATGT 58.356 47.619 0.00 0.00 0.00 3.21
90 91 1.949525 CCGGGCATCTTAACCTTCATG 59.050 52.381 0.00 0.00 0.00 3.07
91 92 1.133792 CCCGGGCATCTTAACCTTCAT 60.134 52.381 8.08 0.00 0.00 2.57
92 93 0.254747 CCCGGGCATCTTAACCTTCA 59.745 55.000 8.08 0.00 0.00 3.02
93 94 1.101635 GCCCGGGCATCTTAACCTTC 61.102 60.000 40.73 5.21 41.49 3.46
94 95 1.076995 GCCCGGGCATCTTAACCTT 60.077 57.895 40.73 0.00 41.49 3.50
95 96 2.595655 GCCCGGGCATCTTAACCT 59.404 61.111 40.73 0.00 41.49 3.50
96 97 2.518587 GGCCCGGGCATCTTAACC 60.519 66.667 44.46 22.62 44.11 2.85
97 98 2.879813 TTCGGCCCGGGCATCTTAAC 62.880 60.000 44.46 25.27 44.11 2.01
98 99 1.990160 ATTCGGCCCGGGCATCTTAA 61.990 55.000 44.46 28.88 44.11 1.85
99 100 2.448582 ATTCGGCCCGGGCATCTTA 61.449 57.895 44.46 25.21 44.11 2.10
100 101 3.809013 ATTCGGCCCGGGCATCTT 61.809 61.111 44.46 24.66 44.11 2.40
101 102 4.569180 CATTCGGCCCGGGCATCT 62.569 66.667 44.46 24.12 44.11 2.90
105 106 2.969300 TAATTCCATTCGGCCCGGGC 62.969 60.000 38.57 38.57 41.06 6.13
106 107 0.251165 ATAATTCCATTCGGCCCGGG 60.251 55.000 19.09 19.09 0.00 5.73
107 108 1.165270 GATAATTCCATTCGGCCCGG 58.835 55.000 1.90 0.00 0.00 5.73
108 109 1.535462 GTGATAATTCCATTCGGCCCG 59.465 52.381 0.00 0.00 0.00 6.13
109 110 2.814336 GAGTGATAATTCCATTCGGCCC 59.186 50.000 0.00 0.00 0.00 5.80
110 111 3.744660 AGAGTGATAATTCCATTCGGCC 58.255 45.455 0.00 0.00 0.00 6.13
111 112 4.390297 GCTAGAGTGATAATTCCATTCGGC 59.610 45.833 0.00 0.00 0.00 5.54
112 113 5.788450 AGCTAGAGTGATAATTCCATTCGG 58.212 41.667 0.00 0.00 0.00 4.30
113 114 7.598278 ACTAGCTAGAGTGATAATTCCATTCG 58.402 38.462 27.45 0.00 0.00 3.34
126 127 2.550606 GTCCGGATCACTAGCTAGAGTG 59.449 54.545 27.45 18.33 46.90 3.51
127 128 2.172930 TGTCCGGATCACTAGCTAGAGT 59.827 50.000 27.45 11.85 0.00 3.24
128 129 2.852449 TGTCCGGATCACTAGCTAGAG 58.148 52.381 27.45 19.37 0.00 2.43
129 130 3.510531 ATGTCCGGATCACTAGCTAGA 57.489 47.619 27.45 6.45 0.00 2.43
130 131 3.127895 GCTATGTCCGGATCACTAGCTAG 59.872 52.174 19.44 19.44 31.23 3.42
131 132 3.082548 GCTATGTCCGGATCACTAGCTA 58.917 50.000 20.98 0.00 31.23 3.32
132 133 1.889829 GCTATGTCCGGATCACTAGCT 59.110 52.381 20.98 0.00 31.23 3.32
133 134 1.613925 TGCTATGTCCGGATCACTAGC 59.386 52.381 21.25 21.25 33.80 3.42
134 135 2.887783 AGTGCTATGTCCGGATCACTAG 59.112 50.000 7.81 7.75 33.56 2.57
135 136 2.885266 GAGTGCTATGTCCGGATCACTA 59.115 50.000 7.81 0.00 35.23 2.74
136 137 1.683917 GAGTGCTATGTCCGGATCACT 59.316 52.381 7.81 15.65 37.47 3.41
137 138 1.269831 GGAGTGCTATGTCCGGATCAC 60.270 57.143 7.81 11.13 0.00 3.06
138 139 1.040646 GGAGTGCTATGTCCGGATCA 58.959 55.000 7.81 8.44 0.00 2.92
139 140 3.896317 GGAGTGCTATGTCCGGATC 57.104 57.895 7.81 1.69 0.00 3.36
152 153 2.764251 CTTGTTTTCGGCGCGGAGTG 62.764 60.000 17.51 2.86 43.41 3.51
153 154 2.589442 TTGTTTTCGGCGCGGAGT 60.589 55.556 17.51 0.00 0.00 3.85
154 155 2.173382 CTTGTTTTCGGCGCGGAG 59.827 61.111 17.51 3.72 0.00 4.63
155 156 2.280254 TCTTGTTTTCGGCGCGGA 60.280 55.556 14.27 14.27 0.00 5.54
156 157 2.127383 GTCTTGTTTTCGGCGCGG 60.127 61.111 8.83 8.94 0.00 6.46
157 158 2.496794 CGTCTTGTTTTCGGCGCG 60.497 61.111 0.00 0.00 0.00 6.86
158 159 2.127383 CCGTCTTGTTTTCGGCGC 60.127 61.111 0.00 0.00 37.90 6.53
161 162 2.554272 CGGCCGTCTTGTTTTCGG 59.446 61.111 19.50 0.00 45.94 4.30
162 163 2.127383 GCGGCCGTCTTGTTTTCG 60.127 61.111 28.70 0.00 0.00 3.46
163 164 0.039527 AATGCGGCCGTCTTGTTTTC 60.040 50.000 28.70 6.86 0.00 2.29
164 165 1.199097 CTAATGCGGCCGTCTTGTTTT 59.801 47.619 28.70 11.99 0.00 2.43
165 166 0.802494 CTAATGCGGCCGTCTTGTTT 59.198 50.000 28.70 13.35 0.00 2.83
166 167 1.644786 GCTAATGCGGCCGTCTTGTT 61.645 55.000 28.70 16.04 0.00 2.83
167 168 2.106683 GCTAATGCGGCCGTCTTGT 61.107 57.895 28.70 10.49 0.00 3.16
168 169 2.709475 GCTAATGCGGCCGTCTTG 59.291 61.111 28.70 14.34 0.00 3.02
169 170 2.513897 GGCTAATGCGGCCGTCTT 60.514 61.111 28.70 21.66 40.19 3.01
175 176 2.189499 CCTCAAGGGCTAATGCGGC 61.189 63.158 0.00 0.00 40.82 6.53
176 177 4.147701 CCTCAAGGGCTAATGCGG 57.852 61.111 0.00 0.00 40.82 5.69
185 186 2.028125 TTCGGATAGCGCCTCAAGGG 62.028 60.000 2.29 0.00 35.18 3.95
186 187 0.598680 CTTCGGATAGCGCCTCAAGG 60.599 60.000 2.29 0.00 38.53 3.61
187 188 1.218230 GCTTCGGATAGCGCCTCAAG 61.218 60.000 2.29 3.66 0.00 3.02
188 189 1.227263 GCTTCGGATAGCGCCTCAA 60.227 57.895 2.29 0.00 0.00 3.02
189 190 2.417516 GCTTCGGATAGCGCCTCA 59.582 61.111 2.29 0.00 0.00 3.86
190 191 2.356433 GGCTTCGGATAGCGCCTC 60.356 66.667 2.29 0.32 42.15 4.70
192 193 0.037232 ATAAGGCTTCGGATAGCGCC 60.037 55.000 1.30 0.00 42.15 6.53
193 194 1.461127 CAATAAGGCTTCGGATAGCGC 59.539 52.381 1.30 0.00 42.15 5.92
194 195 3.026630 TCAATAAGGCTTCGGATAGCG 57.973 47.619 1.30 0.00 42.15 4.26
195 196 5.948992 ATTTCAATAAGGCTTCGGATAGC 57.051 39.130 1.30 4.31 40.48 2.97
198 199 8.360390 GGATAAAATTTCAATAAGGCTTCGGAT 58.640 33.333 1.30 0.00 0.00 4.18
199 200 7.468084 CGGATAAAATTTCAATAAGGCTTCGGA 60.468 37.037 1.30 0.00 0.00 4.55
200 201 6.636850 CGGATAAAATTTCAATAAGGCTTCGG 59.363 38.462 1.30 0.00 0.00 4.30
201 202 7.414436 TCGGATAAAATTTCAATAAGGCTTCG 58.586 34.615 1.30 0.00 0.00 3.79
202 203 9.185192 CATCGGATAAAATTTCAATAAGGCTTC 57.815 33.333 1.30 0.00 0.00 3.86
203 204 8.143835 CCATCGGATAAAATTTCAATAAGGCTT 58.856 33.333 4.58 4.58 0.00 4.35
204 205 7.661040 CCATCGGATAAAATTTCAATAAGGCT 58.339 34.615 0.00 0.00 0.00 4.58
205 206 6.366061 GCCATCGGATAAAATTTCAATAAGGC 59.634 38.462 0.00 0.00 0.00 4.35
206 207 6.868339 GGCCATCGGATAAAATTTCAATAAGG 59.132 38.462 0.00 0.00 0.00 2.69
207 208 6.582295 CGGCCATCGGATAAAATTTCAATAAG 59.418 38.462 2.24 0.00 34.75 1.73
208 209 6.263392 TCGGCCATCGGATAAAATTTCAATAA 59.737 34.615 2.24 0.00 39.77 1.40
209 210 5.765677 TCGGCCATCGGATAAAATTTCAATA 59.234 36.000 2.24 0.00 39.77 1.90
210 211 4.582656 TCGGCCATCGGATAAAATTTCAAT 59.417 37.500 2.24 0.00 39.77 2.57
211 212 3.948473 TCGGCCATCGGATAAAATTTCAA 59.052 39.130 2.24 0.00 39.77 2.69
212 213 3.546724 TCGGCCATCGGATAAAATTTCA 58.453 40.909 2.24 0.00 39.77 2.69
213 214 3.058224 CCTCGGCCATCGGATAAAATTTC 60.058 47.826 2.24 0.00 39.77 2.17
214 215 2.884639 CCTCGGCCATCGGATAAAATTT 59.115 45.455 2.24 0.00 39.77 1.82
215 216 2.158667 ACCTCGGCCATCGGATAAAATT 60.159 45.455 2.24 0.00 39.77 1.82
216 217 1.420138 ACCTCGGCCATCGGATAAAAT 59.580 47.619 2.24 0.00 39.77 1.82
217 218 0.834612 ACCTCGGCCATCGGATAAAA 59.165 50.000 2.24 0.00 39.77 1.52
218 219 0.834612 AACCTCGGCCATCGGATAAA 59.165 50.000 2.24 0.00 39.77 1.40
219 220 0.105964 CAACCTCGGCCATCGGATAA 59.894 55.000 2.24 0.00 39.77 1.75
220 221 0.757561 TCAACCTCGGCCATCGGATA 60.758 55.000 2.24 0.00 39.77 2.59
221 222 1.410850 ATCAACCTCGGCCATCGGAT 61.411 55.000 2.24 0.00 39.77 4.18
222 223 1.622607 AATCAACCTCGGCCATCGGA 61.623 55.000 2.24 0.00 39.77 4.55
223 224 1.153168 AATCAACCTCGGCCATCGG 60.153 57.895 2.24 1.29 39.77 4.18
224 225 1.439353 CCAATCAACCTCGGCCATCG 61.439 60.000 2.24 0.00 40.90 3.84
225 226 1.103398 CCCAATCAACCTCGGCCATC 61.103 60.000 2.24 0.00 0.00 3.51
226 227 1.076777 CCCAATCAACCTCGGCCAT 60.077 57.895 2.24 0.00 0.00 4.40
227 228 1.202099 TACCCAATCAACCTCGGCCA 61.202 55.000 2.24 0.00 0.00 5.36
228 229 0.034863 TTACCCAATCAACCTCGGCC 60.035 55.000 0.00 0.00 0.00 6.13
229 230 1.828979 TTTACCCAATCAACCTCGGC 58.171 50.000 0.00 0.00 0.00 5.54
230 231 4.760204 GGATATTTACCCAATCAACCTCGG 59.240 45.833 0.00 0.00 0.00 4.63
231 232 5.373222 TGGATATTTACCCAATCAACCTCG 58.627 41.667 0.00 0.00 0.00 4.63
232 233 7.505585 TCATTGGATATTTACCCAATCAACCTC 59.494 37.037 0.00 0.00 46.94 3.85
233 234 7.287696 GTCATTGGATATTTACCCAATCAACCT 59.712 37.037 0.00 0.00 46.94 3.50
234 235 7.433680 GTCATTGGATATTTACCCAATCAACC 58.566 38.462 0.00 0.00 46.94 3.77
235 236 7.433680 GGTCATTGGATATTTACCCAATCAAC 58.566 38.462 0.00 0.00 46.94 3.18
236 237 6.553100 GGGTCATTGGATATTTACCCAATCAA 59.447 38.462 0.00 0.00 46.94 2.57
237 238 6.074648 GGGTCATTGGATATTTACCCAATCA 58.925 40.000 0.00 0.00 46.94 2.57
238 239 6.590234 GGGTCATTGGATATTTACCCAATC 57.410 41.667 0.00 0.00 46.94 2.67
242 243 4.798882 TGTGGGTCATTGGATATTTACCC 58.201 43.478 0.00 0.00 45.64 3.69
243 244 5.654650 TGTTGTGGGTCATTGGATATTTACC 59.345 40.000 0.00 0.00 0.00 2.85
244 245 6.767524 TGTTGTGGGTCATTGGATATTTAC 57.232 37.500 0.00 0.00 0.00 2.01
245 246 7.969690 ATTGTTGTGGGTCATTGGATATTTA 57.030 32.000 0.00 0.00 0.00 1.40
246 247 6.872585 ATTGTTGTGGGTCATTGGATATTT 57.127 33.333 0.00 0.00 0.00 1.40
247 248 6.872585 AATTGTTGTGGGTCATTGGATATT 57.127 33.333 0.00 0.00 0.00 1.28
248 249 6.352051 CCAAATTGTTGTGGGTCATTGGATAT 60.352 38.462 0.00 0.00 38.64 1.63
249 250 5.046735 CCAAATTGTTGTGGGTCATTGGATA 60.047 40.000 0.00 0.00 38.64 2.59
250 251 4.262981 CCAAATTGTTGTGGGTCATTGGAT 60.263 41.667 0.00 0.00 38.64 3.41
251 252 3.070734 CCAAATTGTTGTGGGTCATTGGA 59.929 43.478 0.00 0.00 38.64 3.53
252 253 3.401182 CCAAATTGTTGTGGGTCATTGG 58.599 45.455 0.00 0.00 32.40 3.16
260 261 2.226330 TCTCGACCCAAATTGTTGTGG 58.774 47.619 0.00 0.00 32.40 4.17
261 262 3.119849 GGATCTCGACCCAAATTGTTGTG 60.120 47.826 0.00 0.00 32.40 3.33
262 263 3.081804 GGATCTCGACCCAAATTGTTGT 58.918 45.455 0.00 0.00 32.40 3.32
263 264 2.095853 CGGATCTCGACCCAAATTGTTG 59.904 50.000 0.00 0.00 42.43 3.33
264 265 2.027561 TCGGATCTCGACCCAAATTGTT 60.028 45.455 2.65 0.00 43.74 2.83
265 266 1.553248 TCGGATCTCGACCCAAATTGT 59.447 47.619 2.65 0.00 43.74 2.71
266 267 2.309528 TCGGATCTCGACCCAAATTG 57.690 50.000 2.65 0.00 43.74 2.32
276 277 0.741326 ACACAGACCATCGGATCTCG 59.259 55.000 0.00 0.00 40.90 4.04
277 278 1.751351 TGACACAGACCATCGGATCTC 59.249 52.381 0.00 0.00 0.00 2.75
278 279 1.478510 GTGACACAGACCATCGGATCT 59.521 52.381 0.00 0.00 0.00 2.75
279 280 1.204704 TGTGACACAGACCATCGGATC 59.795 52.381 3.56 0.00 0.00 3.36
280 281 1.266178 TGTGACACAGACCATCGGAT 58.734 50.000 3.56 0.00 0.00 4.18
281 282 1.044611 TTGTGACACAGACCATCGGA 58.955 50.000 8.55 0.00 0.00 4.55
282 283 1.733912 CATTGTGACACAGACCATCGG 59.266 52.381 8.55 0.00 0.00 4.18
283 284 2.669924 CTCATTGTGACACAGACCATCG 59.330 50.000 8.55 0.00 0.00 3.84
284 285 3.930336 TCTCATTGTGACACAGACCATC 58.070 45.455 8.55 0.00 0.00 3.51
285 286 4.564782 ATCTCATTGTGACACAGACCAT 57.435 40.909 8.55 0.00 0.00 3.55
286 287 4.318332 GAATCTCATTGTGACACAGACCA 58.682 43.478 8.55 0.00 0.00 4.02
287 288 3.686726 GGAATCTCATTGTGACACAGACC 59.313 47.826 8.55 0.00 0.00 3.85
288 289 3.369147 CGGAATCTCATTGTGACACAGAC 59.631 47.826 8.55 0.00 0.00 3.51
289 290 3.258123 TCGGAATCTCATTGTGACACAGA 59.742 43.478 8.55 3.05 0.00 3.41
290 291 3.588955 TCGGAATCTCATTGTGACACAG 58.411 45.455 8.55 0.00 0.00 3.66
291 292 3.676291 TCGGAATCTCATTGTGACACA 57.324 42.857 3.56 3.56 0.00 3.72
292 293 4.269603 CAGATCGGAATCTCATTGTGACAC 59.730 45.833 0.00 0.00 40.38 3.67
293 294 4.160252 TCAGATCGGAATCTCATTGTGACA 59.840 41.667 0.00 0.00 40.38 3.58
294 295 4.505922 GTCAGATCGGAATCTCATTGTGAC 59.494 45.833 0.00 0.00 40.38 3.67
295 296 4.160252 TGTCAGATCGGAATCTCATTGTGA 59.840 41.667 0.00 0.00 40.38 3.58
296 297 4.436332 TGTCAGATCGGAATCTCATTGTG 58.564 43.478 0.00 0.00 40.38 3.33
297 298 4.403752 TCTGTCAGATCGGAATCTCATTGT 59.596 41.667 0.00 0.00 40.38 2.71
298 299 4.941657 TCTGTCAGATCGGAATCTCATTG 58.058 43.478 0.00 0.00 40.38 2.82
299 300 5.303845 TCATCTGTCAGATCGGAATCTCATT 59.696 40.000 12.62 0.00 40.38 2.57
300 301 4.831710 TCATCTGTCAGATCGGAATCTCAT 59.168 41.667 12.62 0.00 40.38 2.90
301 302 4.210331 TCATCTGTCAGATCGGAATCTCA 58.790 43.478 12.62 0.00 40.38 3.27
302 303 4.844998 TCATCTGTCAGATCGGAATCTC 57.155 45.455 12.62 0.00 40.38 2.75
303 304 5.604758 TTTCATCTGTCAGATCGGAATCT 57.395 39.130 12.62 0.00 43.24 2.40
304 305 6.073331 GGATTTTCATCTGTCAGATCGGAATC 60.073 42.308 12.62 17.94 31.32 2.52
305 306 5.762218 GGATTTTCATCTGTCAGATCGGAAT 59.238 40.000 12.62 11.76 31.32 3.01
306 307 5.118990 GGATTTTCATCTGTCAGATCGGAA 58.881 41.667 12.62 11.21 31.32 4.30
307 308 4.162131 TGGATTTTCATCTGTCAGATCGGA 59.838 41.667 12.62 5.63 31.32 4.55
308 309 4.445453 TGGATTTTCATCTGTCAGATCGG 58.555 43.478 12.62 3.24 31.32 4.18
309 310 6.426980 TTTGGATTTTCATCTGTCAGATCG 57.573 37.500 12.62 8.76 31.32 3.69
310 311 6.264088 GCTTTGGATTTTCATCTGTCAGATC 58.736 40.000 12.62 1.49 31.32 2.75
311 312 5.163683 CGCTTTGGATTTTCATCTGTCAGAT 60.164 40.000 9.68 9.68 34.74 2.90
312 313 4.154737 CGCTTTGGATTTTCATCTGTCAGA 59.845 41.667 4.68 4.68 0.00 3.27
313 314 4.409570 CGCTTTGGATTTTCATCTGTCAG 58.590 43.478 0.00 0.00 0.00 3.51
314 315 3.366273 GCGCTTTGGATTTTCATCTGTCA 60.366 43.478 0.00 0.00 0.00 3.58
315 316 3.119708 AGCGCTTTGGATTTTCATCTGTC 60.120 43.478 2.64 0.00 0.00 3.51
316 317 2.821969 AGCGCTTTGGATTTTCATCTGT 59.178 40.909 2.64 0.00 0.00 3.41
317 318 3.119743 TCAGCGCTTTGGATTTTCATCTG 60.120 43.478 7.50 0.00 0.00 2.90
318 319 3.084039 TCAGCGCTTTGGATTTTCATCT 58.916 40.909 7.50 0.00 0.00 2.90
319 320 3.432782 CTCAGCGCTTTGGATTTTCATC 58.567 45.455 7.50 0.00 0.00 2.92
320 321 2.165030 CCTCAGCGCTTTGGATTTTCAT 59.835 45.455 17.85 0.00 0.00 2.57
321 322 1.541147 CCTCAGCGCTTTGGATTTTCA 59.459 47.619 17.85 0.00 0.00 2.69
322 323 1.812571 TCCTCAGCGCTTTGGATTTTC 59.187 47.619 20.47 0.00 0.00 2.29
323 324 1.815003 CTCCTCAGCGCTTTGGATTTT 59.185 47.619 23.38 0.00 0.00 1.82
324 325 1.457346 CTCCTCAGCGCTTTGGATTT 58.543 50.000 23.38 0.00 0.00 2.17
325 326 0.393537 CCTCCTCAGCGCTTTGGATT 60.394 55.000 23.38 0.00 0.00 3.01
326 327 1.222936 CCTCCTCAGCGCTTTGGAT 59.777 57.895 23.38 0.00 0.00 3.41
327 328 2.665000 CCTCCTCAGCGCTTTGGA 59.335 61.111 22.22 22.22 0.00 3.53
328 329 3.130160 GCCTCCTCAGCGCTTTGG 61.130 66.667 7.50 13.64 0.00 3.28
329 330 2.046507 AGCCTCCTCAGCGCTTTG 60.047 61.111 7.50 2.72 34.64 2.77
330 331 2.267324 GAGCCTCCTCAGCGCTTT 59.733 61.111 7.50 0.00 38.03 3.51
331 332 3.780173 GGAGCCTCCTCAGCGCTT 61.780 66.667 7.50 0.00 39.96 4.68
333 334 2.883267 AAATGGAGCCTCCTCAGCGC 62.883 60.000 12.94 0.00 39.96 5.92
334 335 0.393537 AAAATGGAGCCTCCTCAGCG 60.394 55.000 12.94 0.00 39.96 5.18
335 336 1.101331 CAAAATGGAGCCTCCTCAGC 58.899 55.000 12.94 0.00 39.96 4.26
336 337 1.005215 ACCAAAATGGAGCCTCCTCAG 59.995 52.381 12.94 0.00 40.96 3.35
337 338 1.075601 ACCAAAATGGAGCCTCCTCA 58.924 50.000 12.94 0.00 40.96 3.86
338 339 2.095461 GAACCAAAATGGAGCCTCCTC 58.905 52.381 12.94 0.00 40.96 3.71
339 340 1.614317 CGAACCAAAATGGAGCCTCCT 60.614 52.381 12.94 0.00 40.96 3.69
340 341 0.811281 CGAACCAAAATGGAGCCTCC 59.189 55.000 2.98 2.98 40.96 4.30
341 342 0.811281 CCGAACCAAAATGGAGCCTC 59.189 55.000 2.85 0.00 40.96 4.70
342 343 0.112412 ACCGAACCAAAATGGAGCCT 59.888 50.000 2.85 0.00 40.96 4.58
343 344 0.526211 GACCGAACCAAAATGGAGCC 59.474 55.000 2.85 0.00 40.96 4.70
344 345 1.468914 GAGACCGAACCAAAATGGAGC 59.531 52.381 2.85 0.00 40.96 4.70
345 346 3.059352 AGAGACCGAACCAAAATGGAG 57.941 47.619 2.85 0.00 40.96 3.86
346 347 4.202377 TGTTAGAGACCGAACCAAAATGGA 60.202 41.667 2.85 0.00 40.96 3.41
347 348 4.069304 TGTTAGAGACCGAACCAAAATGG 58.931 43.478 0.00 0.00 45.02 3.16
348 349 5.682943 TTGTTAGAGACCGAACCAAAATG 57.317 39.130 0.00 0.00 0.00 2.32
349 350 5.183140 CCATTGTTAGAGACCGAACCAAAAT 59.817 40.000 0.00 0.00 0.00 1.82
350 351 4.517453 CCATTGTTAGAGACCGAACCAAAA 59.483 41.667 0.00 0.00 0.00 2.44
351 352 4.069304 CCATTGTTAGAGACCGAACCAAA 58.931 43.478 0.00 0.00 0.00 3.28
352 353 3.558321 CCCATTGTTAGAGACCGAACCAA 60.558 47.826 0.00 0.00 0.00 3.67
353 354 2.027561 CCCATTGTTAGAGACCGAACCA 60.028 50.000 0.00 0.00 0.00 3.67
354 355 2.235402 TCCCATTGTTAGAGACCGAACC 59.765 50.000 0.00 0.00 0.00 3.62
355 356 3.604875 TCCCATTGTTAGAGACCGAAC 57.395 47.619 0.00 0.00 0.00 3.95
356 357 4.383770 GGAATCCCATTGTTAGAGACCGAA 60.384 45.833 0.00 0.00 0.00 4.30
357 358 3.134081 GGAATCCCATTGTTAGAGACCGA 59.866 47.826 0.00 0.00 0.00 4.69
358 359 3.134804 AGGAATCCCATTGTTAGAGACCG 59.865 47.826 0.00 0.00 33.88 4.79
359 360 4.779993 AGGAATCCCATTGTTAGAGACC 57.220 45.455 0.00 0.00 33.88 3.85
360 361 5.586643 GTGAAGGAATCCCATTGTTAGAGAC 59.413 44.000 0.00 0.00 33.88 3.36
361 362 5.626809 CGTGAAGGAATCCCATTGTTAGAGA 60.627 44.000 0.00 0.00 33.88 3.10
362 363 4.572389 CGTGAAGGAATCCCATTGTTAGAG 59.428 45.833 0.00 0.00 33.88 2.43
363 364 4.224147 TCGTGAAGGAATCCCATTGTTAGA 59.776 41.667 0.00 0.00 33.88 2.10
364 365 4.513442 TCGTGAAGGAATCCCATTGTTAG 58.487 43.478 0.00 0.00 33.88 2.34
365 366 4.224147 TCTCGTGAAGGAATCCCATTGTTA 59.776 41.667 0.00 0.00 33.88 2.41
366 367 3.009033 TCTCGTGAAGGAATCCCATTGTT 59.991 43.478 0.00 0.00 33.88 2.83
367 368 2.571653 TCTCGTGAAGGAATCCCATTGT 59.428 45.455 0.00 0.00 33.88 2.71
368 369 3.266510 TCTCGTGAAGGAATCCCATTG 57.733 47.619 0.00 0.00 33.88 2.82
369 370 4.455606 GAATCTCGTGAAGGAATCCCATT 58.544 43.478 0.00 0.00 33.88 3.16
370 371 3.181450 GGAATCTCGTGAAGGAATCCCAT 60.181 47.826 0.00 0.00 33.88 4.00
371 372 2.170607 GGAATCTCGTGAAGGAATCCCA 59.829 50.000 0.00 0.00 33.88 4.37
372 373 2.436173 AGGAATCTCGTGAAGGAATCCC 59.564 50.000 0.00 0.00 0.00 3.85
373 374 3.828875 AGGAATCTCGTGAAGGAATCC 57.171 47.619 0.00 0.00 0.00 3.01
374 375 4.572795 GGAAAGGAATCTCGTGAAGGAATC 59.427 45.833 0.00 0.00 0.00 2.52
375 376 4.518249 GGAAAGGAATCTCGTGAAGGAAT 58.482 43.478 0.00 0.00 0.00 3.01
376 377 3.616560 CGGAAAGGAATCTCGTGAAGGAA 60.617 47.826 0.00 0.00 0.00 3.36
377 378 2.094182 CGGAAAGGAATCTCGTGAAGGA 60.094 50.000 0.00 0.00 0.00 3.36
378 379 2.094182 TCGGAAAGGAATCTCGTGAAGG 60.094 50.000 0.00 0.00 0.00 3.46
379 380 3.232213 TCGGAAAGGAATCTCGTGAAG 57.768 47.619 0.00 0.00 0.00 3.02
383 384 4.430908 GTTGTATCGGAAAGGAATCTCGT 58.569 43.478 0.00 0.00 0.00 4.18
811 858 4.854784 GCGATGGCAGCGACGAGA 62.855 66.667 30.95 0.00 39.62 4.04
876 923 0.958876 CGTACCTCAAAACCCCAGCC 60.959 60.000 0.00 0.00 0.00 4.85
881 952 2.064014 CTCGTTCGTACCTCAAAACCC 58.936 52.381 0.00 0.00 0.00 4.11
956 1027 1.008361 CACGCCCGAAATTTTGCCAG 61.008 55.000 0.00 0.00 0.00 4.85
1041 1112 4.754667 GGGTCGTCAGGGGCGAAC 62.755 72.222 0.00 0.00 44.43 3.95
1250 1375 4.631247 TCTGTTGCGGCTGCTGCT 62.631 61.111 31.19 0.00 43.34 4.24
1369 1494 1.008079 GTTGCTGTGCTTGCTGACC 60.008 57.895 0.00 0.00 0.00 4.02
1370 1495 1.008079 GGTTGCTGTGCTTGCTGAC 60.008 57.895 0.00 0.00 0.00 3.51
1371 1496 2.545596 CGGTTGCTGTGCTTGCTGA 61.546 57.895 0.00 0.00 0.00 4.26
1372 1497 2.050714 CGGTTGCTGTGCTTGCTG 60.051 61.111 0.00 0.00 0.00 4.41
1373 1498 3.969802 GCGGTTGCTGTGCTTGCT 61.970 61.111 0.00 0.00 38.39 3.91
1383 1508 1.804151 TGATACTGAAACAGCGGTTGC 59.196 47.619 2.10 0.97 37.30 4.17
1384 1509 3.249799 TGTTGATACTGAAACAGCGGTTG 59.750 43.478 2.10 0.00 37.30 3.77
1385 1510 3.472652 TGTTGATACTGAAACAGCGGTT 58.527 40.909 0.00 0.00 39.43 4.44
1386 1511 3.067106 CTGTTGATACTGAAACAGCGGT 58.933 45.455 2.90 0.00 44.76 5.68
1387 1512 3.729526 CTGTTGATACTGAAACAGCGG 57.270 47.619 2.90 0.00 44.76 5.52
1391 1516 3.475575 TGCTGCTGTTGATACTGAAACA 58.524 40.909 0.00 0.00 35.14 2.83
1392 1517 4.214119 TCTTGCTGCTGTTGATACTGAAAC 59.786 41.667 0.00 0.00 0.00 2.78
1393 1518 4.388485 TCTTGCTGCTGTTGATACTGAAA 58.612 39.130 0.00 0.00 0.00 2.69
1394 1519 4.006780 TCTTGCTGCTGTTGATACTGAA 57.993 40.909 0.00 0.00 0.00 3.02
1395 1520 3.683365 TCTTGCTGCTGTTGATACTGA 57.317 42.857 0.00 0.00 0.00 3.41
1396 1521 3.499537 TGTTCTTGCTGCTGTTGATACTG 59.500 43.478 0.00 0.00 0.00 2.74
1397 1522 3.743521 TGTTCTTGCTGCTGTTGATACT 58.256 40.909 0.00 0.00 0.00 2.12
1398 1523 3.748048 TCTGTTCTTGCTGCTGTTGATAC 59.252 43.478 0.00 0.00 0.00 2.24
1399 1524 4.006780 TCTGTTCTTGCTGCTGTTGATA 57.993 40.909 0.00 0.00 0.00 2.15
1400 1525 2.854963 TCTGTTCTTGCTGCTGTTGAT 58.145 42.857 0.00 0.00 0.00 2.57
1401 1526 2.330440 TCTGTTCTTGCTGCTGTTGA 57.670 45.000 0.00 0.00 0.00 3.18
1402 1527 2.921069 GCATCTGTTCTTGCTGCTGTTG 60.921 50.000 0.00 0.00 35.95 3.33
1403 1528 1.268899 GCATCTGTTCTTGCTGCTGTT 59.731 47.619 0.00 0.00 35.95 3.16
1404 1529 0.879765 GCATCTGTTCTTGCTGCTGT 59.120 50.000 0.00 0.00 35.95 4.40
1450 1575 2.416972 CGTTTGGGTACTGAGGAGCTAC 60.417 54.545 0.00 0.00 0.00 3.58
1561 1686 4.570772 GCCTTGATTATACTGAGTTTGCGA 59.429 41.667 0.00 0.00 0.00 5.10
2288 2413 2.100605 GCTACTAGCCAGTTGTTGCT 57.899 50.000 0.00 0.00 41.57 3.91
2789 2917 8.458573 AGTTAGTGGTGTCAATTTCATAAACA 57.541 30.769 0.00 0.00 0.00 2.83
3177 3305 1.877443 AGTTGCGTTTGGAATAGCGTT 59.123 42.857 0.00 0.00 0.00 4.84
3720 3860 5.221722 ACAACTCAAGAGAAAGCATACCTCA 60.222 40.000 3.73 0.00 0.00 3.86
3922 4062 1.263356 GTCACTACACTGCCCAGGTA 58.737 55.000 0.00 0.00 0.00 3.08
3924 4064 0.615331 ATGTCACTACACTGCCCAGG 59.385 55.000 0.00 0.00 38.78 4.45
3963 4103 5.520288 ACATCAATTCTTCCGATAGTTGTCG 59.480 40.000 0.00 0.00 41.13 4.35
4132 4272 5.461737 GCATCTGCAGAAAGACACTATCTAC 59.538 44.000 22.50 0.00 37.62 2.59
4286 4426 0.543749 CCAGTGTCTTCCCTGATCCC 59.456 60.000 0.00 0.00 0.00 3.85
4849 5120 4.380867 CCAGCAACAGAACCCATGAAATAC 60.381 45.833 0.00 0.00 0.00 1.89
5292 5563 6.237887 ACAAACAAAAGCATGGCCATATAT 57.762 33.333 20.30 4.08 0.00 0.86
5293 5564 5.674052 ACAAACAAAAGCATGGCCATATA 57.326 34.783 20.30 0.00 0.00 0.86
5434 5708 0.737715 GAATCTGCTCCAAGCGACGT 60.738 55.000 0.00 0.00 46.26 4.34
5461 5735 3.331889 TGATCTTTGAGCCCCTTTCTTCT 59.668 43.478 0.00 0.00 0.00 2.85
5947 6221 1.702401 TGCTGACCAGTACCATCCAAA 59.298 47.619 0.00 0.00 0.00 3.28
6064 6338 2.993899 AGCAGATTCAAAACGACTACCG 59.006 45.455 0.00 0.00 45.44 4.02
6101 6375 3.461831 CCCTCCCTAATTCCACCATAACA 59.538 47.826 0.00 0.00 0.00 2.41
6991 7319 2.036475 AGGTGACATATCAGATGCGTCC 59.964 50.000 1.23 4.05 34.75 4.79
7134 7462 2.924185 GCAGTTGCAGAGAAGCTCA 58.076 52.632 0.00 0.00 41.59 4.26
7148 7476 0.686789 GGCCCTGGAAAATTTGCAGT 59.313 50.000 22.37 0.00 46.32 4.40
7256 7584 9.791801 AGCTTAAATTGTTTTGGGTATGAAAAT 57.208 25.926 0.00 0.00 0.00 1.82
7302 7630 4.819105 AGGAAAGTACAATCATCCGACA 57.181 40.909 0.00 0.00 35.31 4.35
7304 7632 6.978674 ATCTAGGAAAGTACAATCATCCGA 57.021 37.500 0.00 0.00 35.31 4.55
7334 7662 8.691661 ATGTTCAGTACACCATCTAAAAGTTT 57.308 30.769 0.00 0.00 40.19 2.66
7340 7668 8.084985 TGGATTATGTTCAGTACACCATCTAA 57.915 34.615 0.00 0.00 40.19 2.10
7351 7679 6.539173 TGTACTTGGTTGGATTATGTTCAGT 58.461 36.000 0.00 0.00 0.00 3.41
7374 7702 2.653890 CATTGCAGTTCGTTCAACCTG 58.346 47.619 0.00 0.00 35.28 4.00
7376 7704 1.408422 GCATTGCAGTTCGTTCAACC 58.592 50.000 3.15 0.00 35.28 3.77
7399 7727 7.478520 AATGACAAAGTAGTGTGACTTGTAC 57.521 36.000 0.00 0.00 39.62 2.90
7401 7729 7.391148 AAAATGACAAAGTAGTGTGACTTGT 57.609 32.000 0.00 0.00 39.62 3.16
7440 7768 0.255890 AACTACCGCCCATGCTTCAT 59.744 50.000 0.00 0.00 34.43 2.57
7453 7781 6.870971 TTGACAAATGTCCTGTAAACTACC 57.129 37.500 10.83 0.00 44.15 3.18
7486 7814 3.927142 CCATGTAGAAAGAACAGACGGAC 59.073 47.826 0.00 0.00 0.00 4.79
7489 7817 5.346281 GTCTTCCATGTAGAAAGAACAGACG 59.654 44.000 0.00 0.00 0.00 4.18
7491 7819 6.419484 TGTCTTCCATGTAGAAAGAACAGA 57.581 37.500 0.00 0.00 0.00 3.41
7542 7871 9.053135 CATTTATGCGTTTCAAATTTCAAATGG 57.947 29.630 8.58 0.00 0.00 3.16
7561 7890 7.719193 TCTGTACCCACATAATCACCATTTATG 59.281 37.037 0.00 0.00 41.00 1.90
7570 7899 6.716284 TCAACAATCTGTACCCACATAATCA 58.284 36.000 0.00 0.00 33.14 2.57
7700 8032 6.533723 CCTCGTTGCTACAAACAACTCATATA 59.466 38.462 0.00 0.00 44.15 0.86
7703 8035 3.498397 CCTCGTTGCTACAAACAACTCAT 59.502 43.478 0.00 0.00 44.15 2.90
7704 8036 2.869801 CCTCGTTGCTACAAACAACTCA 59.130 45.455 0.00 0.00 44.15 3.41
7706 8038 3.188159 TCCTCGTTGCTACAAACAACT 57.812 42.857 0.00 0.00 44.15 3.16
7707 8039 3.558418 TCTTCCTCGTTGCTACAAACAAC 59.442 43.478 0.00 0.00 43.15 3.32
7708 8040 3.799366 TCTTCCTCGTTGCTACAAACAA 58.201 40.909 0.00 0.00 0.00 2.83
7709 8041 3.181469 ACTCTTCCTCGTTGCTACAAACA 60.181 43.478 0.00 0.00 0.00 2.83
7710 8042 3.391049 ACTCTTCCTCGTTGCTACAAAC 58.609 45.455 0.00 0.00 0.00 2.93
7712 8044 4.521639 TCTTACTCTTCCTCGTTGCTACAA 59.478 41.667 0.00 0.00 0.00 2.41
7714 8046 4.156373 ACTCTTACTCTTCCTCGTTGCTAC 59.844 45.833 0.00 0.00 0.00 3.58
7715 8047 4.333690 ACTCTTACTCTTCCTCGTTGCTA 58.666 43.478 0.00 0.00 0.00 3.49
7716 8048 3.158676 ACTCTTACTCTTCCTCGTTGCT 58.841 45.455 0.00 0.00 0.00 3.91
7717 8049 3.579335 ACTCTTACTCTTCCTCGTTGC 57.421 47.619 0.00 0.00 0.00 4.17
7718 8050 4.238514 CCAACTCTTACTCTTCCTCGTTG 58.761 47.826 0.00 0.00 0.00 4.10
7719 8051 3.258622 CCCAACTCTTACTCTTCCTCGTT 59.741 47.826 0.00 0.00 0.00 3.85
7720 8052 2.826725 CCCAACTCTTACTCTTCCTCGT 59.173 50.000 0.00 0.00 0.00 4.18
7721 8053 2.417515 GCCCAACTCTTACTCTTCCTCG 60.418 54.545 0.00 0.00 0.00 4.63
7725 8061 2.745515 ACGCCCAACTCTTACTCTTC 57.254 50.000 0.00 0.00 0.00 2.87
7766 8102 7.833786 TCGCTATCTAGAACTTGAAAGGTAAA 58.166 34.615 0.00 0.00 0.00 2.01
7767 8103 7.400599 TCGCTATCTAGAACTTGAAAGGTAA 57.599 36.000 0.00 0.00 0.00 2.85
7768 8104 7.400599 TTCGCTATCTAGAACTTGAAAGGTA 57.599 36.000 0.00 0.00 0.00 3.08
7769 8105 5.916661 TCGCTATCTAGAACTTGAAAGGT 57.083 39.130 0.00 0.00 0.00 3.50
7775 8111 9.862371 ACCATTATATTCGCTATCTAGAACTTG 57.138 33.333 0.00 0.00 0.00 3.16
7821 8157 5.479375 AGAACATACCCAACTCTTCTCGTTA 59.521 40.000 0.00 0.00 0.00 3.18
7827 8163 3.437049 GCACAGAACATACCCAACTCTTC 59.563 47.826 0.00 0.00 0.00 2.87
7839 8175 3.705051 AGATTGAATGGGCACAGAACAT 58.295 40.909 0.00 0.00 0.00 2.71
7991 8335 4.644103 ATATCAGTGTTTTCAGCATGGC 57.356 40.909 0.00 0.00 36.16 4.40
8033 8377 1.429148 GGAATACAGCTGGTTCCGCG 61.429 60.000 27.07 0.00 32.85 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.