Multiple sequence alignment - TraesCS3A01G100000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G100000 chr3A 100.000 3265 0 0 1555 4819 64729690 64732954 0.000000e+00 6030.0
1 TraesCS3A01G100000 chr3A 100.000 1197 0 0 1 1197 64728136 64729332 0.000000e+00 2211.0
2 TraesCS3A01G100000 chr3A 91.379 174 14 1 1 174 460169750 460169922 2.240000e-58 237.0
3 TraesCS3A01G100000 chr3B 94.212 2609 110 16 1555 4134 83828149 83830745 0.000000e+00 3943.0
4 TraesCS3A01G100000 chr3B 92.398 1197 70 13 1 1194 83826931 83828109 0.000000e+00 1687.0
5 TraesCS3A01G100000 chr3B 90.244 164 16 0 13 176 168278773 168278610 1.050000e-51 215.0
6 TraesCS3A01G100000 chr3D 93.159 2675 136 15 1668 4303 53381572 53384238 0.000000e+00 3882.0
7 TraesCS3A01G100000 chr3D 93.707 731 42 3 138 866 53379023 53379751 0.000000e+00 1092.0
8 TraesCS3A01G100000 chr3D 93.353 331 16 4 864 1194 53380937 53381261 7.250000e-133 484.0
9 TraesCS3A01G100000 chr4D 92.398 171 13 0 1 171 503136842 503137012 1.340000e-60 244.0
10 TraesCS3A01G100000 chr2D 89.017 173 18 1 6 178 527883132 527883303 3.780000e-51 213.0
11 TraesCS3A01G100000 chr6D 89.024 164 14 3 15 178 150419721 150419562 2.940000e-47 200.0
12 TraesCS3A01G100000 chr5A 87.273 165 20 1 12 176 525703706 525703543 2.290000e-43 187.0
13 TraesCS3A01G100000 chr5D 86.667 165 22 0 15 179 253462916 253462752 2.960000e-42 183.0
14 TraesCS3A01G100000 chr1D 84.444 180 28 0 1 180 373302233 373302412 1.380000e-40 178.0
15 TraesCS3A01G100000 chr6B 100.000 29 0 0 345 373 73356465 73356493 2.000000e-03 54.7
16 TraesCS3A01G100000 chr6B 100.000 29 0 0 345 373 73443630 73443658 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G100000 chr3A 64728136 64732954 4818 False 4120.500000 6030 100.000000 1 4819 2 chr3A.!!$F2 4818
1 TraesCS3A01G100000 chr3B 83826931 83830745 3814 False 2815.000000 3943 93.305000 1 4134 2 chr3B.!!$F1 4133
2 TraesCS3A01G100000 chr3D 53379023 53384238 5215 False 1819.333333 3882 93.406333 138 4303 3 chr3D.!!$F1 4165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.109272 TCTTGATCACGTCGAGGTGC 60.109 55.000 28.68 18.18 38.66 5.01 F
75 76 0.388520 CTTGATCACGTCGAGGTGCA 60.389 55.000 28.68 20.27 37.83 4.57 F
163 164 1.099456 AGGTTGGTACCCCCTAGTCT 58.901 55.000 16.62 0.00 46.28 3.24 F
1962 3327 1.202940 GCCTTGACCTGAAGTTCCCTT 60.203 52.381 0.00 0.00 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1110 2303 0.850883 AAGGATGGAGCAAAGGGGGA 60.851 55.000 0.00 0.0 0.00 4.81 R
1932 3285 1.007387 GGTCAAGGCAAAAGCACCG 60.007 57.895 0.00 0.0 0.00 4.94 R
2027 3392 1.202290 GCAATGGCAAATACTCCACCG 60.202 52.381 0.00 0.0 40.72 4.94 R
3917 5287 1.810151 ACACGCATGGGTATTCACAAC 59.190 47.619 15.82 0.0 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.769844 ACGAAGATGTCCTTGGAGTACAT 59.230 43.478 0.00 0.00 36.57 2.29
36 37 4.096681 AGATGTCCTTGGAGTACATGTCA 58.903 43.478 0.00 0.00 34.09 3.58
47 48 2.299013 AGTACATGTCAAGTCTTCGGCA 59.701 45.455 0.00 0.00 0.00 5.69
49 50 1.081892 CATGTCAAGTCTTCGGCAGG 58.918 55.000 0.00 0.00 0.00 4.85
71 72 1.901538 CTGTCTTGATCACGTCGAGG 58.098 55.000 3.03 3.03 38.66 4.63
72 73 1.200252 CTGTCTTGATCACGTCGAGGT 59.800 52.381 4.63 4.63 38.66 3.85
73 74 1.068541 TGTCTTGATCACGTCGAGGTG 60.069 52.381 27.86 27.86 38.66 4.00
74 75 0.109272 TCTTGATCACGTCGAGGTGC 60.109 55.000 28.68 18.18 38.66 5.01
75 76 0.388520 CTTGATCACGTCGAGGTGCA 60.389 55.000 28.68 20.27 37.83 4.57
87 88 2.044946 GGTGCAAGGCTTCCGGAT 60.045 61.111 4.15 0.00 0.00 4.18
98 99 2.562635 GCTTCCGGATTCCTTCCTTAC 58.437 52.381 4.15 0.00 42.99 2.34
101 102 2.459644 TCCGGATTCCTTCCTTACGAA 58.540 47.619 0.00 0.00 42.99 3.85
129 130 4.626081 CATAAGCCCGGCCCGAGG 62.626 72.222 3.71 5.34 0.00 4.63
142 143 2.046892 CGAGGACTGTGGGCCAAG 60.047 66.667 8.40 11.02 0.00 3.61
163 164 1.099456 AGGTTGGTACCCCCTAGTCT 58.901 55.000 16.62 0.00 46.28 3.24
314 315 3.695830 TTGGTAGCAAGGTTGTCCTAG 57.304 47.619 2.54 0.00 44.35 3.02
418 419 6.441093 TGTAGATGCCATCTTGAAATGAAC 57.559 37.500 13.32 2.86 40.76 3.18
517 518 6.071051 GCCTTCAATCACTAAAACCCCAATAA 60.071 38.462 0.00 0.00 0.00 1.40
528 529 6.943899 AAAACCCCAATAAAGGCATCTAAA 57.056 33.333 0.00 0.00 0.00 1.85
549 550 4.510038 AAGATGCACTTTCAACCATGTC 57.490 40.909 0.00 0.00 34.94 3.06
584 585 2.095466 CCGTGTGTAATTCGCATTTGGT 60.095 45.455 0.00 0.00 38.85 3.67
600 601 6.264088 GCATTTGGTTTTGAATTTTTCAGCA 58.736 32.000 0.00 0.00 41.38 4.41
690 691 7.342942 GCCTAAGTAACAAATATAGTGCGAAC 58.657 38.462 0.00 0.00 0.00 3.95
700 701 7.903431 ACAAATATAGTGCGAACGAAATTCTTC 59.097 33.333 0.00 0.00 34.88 2.87
862 867 6.127619 ACCAAACTGAAAGAAAGGAGAGTTTG 60.128 38.462 13.11 13.11 45.01 2.93
1095 2288 1.681327 TTTCTCCCCTCTACGCGCT 60.681 57.895 5.73 0.00 0.00 5.92
1110 2303 1.779569 GCGCTGCCAAGTATATACGT 58.220 50.000 0.00 1.12 0.00 3.57
1133 2326 2.097825 CCCTTTGCTCCATCCTTCTTG 58.902 52.381 0.00 0.00 0.00 3.02
1137 2330 4.039609 CCTTTGCTCCATCCTTCTTGTTTT 59.960 41.667 0.00 0.00 0.00 2.43
1138 2331 5.453762 CCTTTGCTCCATCCTTCTTGTTTTT 60.454 40.000 0.00 0.00 0.00 1.94
1174 2367 3.012934 GCCTTCCCAAATGTTAGGCTA 57.987 47.619 0.00 0.00 46.14 3.93
1175 2368 3.566351 GCCTTCCCAAATGTTAGGCTAT 58.434 45.455 0.00 0.00 46.14 2.97
1176 2369 4.725490 GCCTTCCCAAATGTTAGGCTATA 58.275 43.478 0.00 0.00 46.14 1.31
1194 2387 2.391926 TATCCGGTTCATGGAGCCTA 57.608 50.000 0.00 0.00 39.30 3.93
1580 2773 8.888332 CTAGTGACTAGCGAGTAATGATTATG 57.112 38.462 6.70 0.00 35.45 1.90
1604 2870 5.163612 GCTGGTCCTTTTGTCCATTCTAATC 60.164 44.000 0.00 0.00 0.00 1.75
1677 3028 7.041780 AGGATCATGTATTCTGTTAATTGTCGC 60.042 37.037 0.00 0.00 0.00 5.19
1691 3042 8.961092 TGTTAATTGTCGCTATTAACTCGTATC 58.039 33.333 22.86 8.42 43.72 2.24
1775 3127 8.702163 ATTTGTTACAAAGTGCTAATTATGGC 57.298 30.769 15.83 0.00 0.00 4.40
1902 3255 5.276868 CGAGAAAGGTTAGCCATTTATGTCG 60.277 44.000 0.00 2.85 37.19 4.35
1932 3285 6.762661 AGTTGTTTGCAAATCATATATTGGGC 59.237 34.615 16.21 0.00 36.22 5.36
1962 3327 1.202940 GCCTTGACCTGAAGTTCCCTT 60.203 52.381 0.00 0.00 0.00 3.95
1976 3341 3.823304 AGTTCCCTTCTTTTGCTCACATC 59.177 43.478 0.00 0.00 0.00 3.06
2027 3392 2.988684 TTTGTGGGCGGTGATGGC 60.989 61.111 0.00 0.00 0.00 4.40
2128 3494 1.329906 CTCCAATGAACTGCGATCAGC 59.670 52.381 0.00 0.00 44.10 4.26
2150 3516 3.736433 CGCCCTTAGTCTCATCTCTTGTG 60.736 52.174 0.00 0.00 0.00 3.33
2356 3722 9.132923 TGAGGAGGTATTTCTATGTTAGTACTG 57.867 37.037 5.39 0.00 0.00 2.74
2407 3773 7.039270 TGTCATGTACTACTATTGCGACAAAT 58.961 34.615 0.00 0.00 0.00 2.32
2548 3914 6.599445 CCTTCCAGATCACTCATTTTCCTAT 58.401 40.000 0.00 0.00 0.00 2.57
2555 3921 8.719648 CAGATCACTCATTTTCCTATTAGATGC 58.280 37.037 0.00 0.00 0.00 3.91
2639 4006 3.134574 ACCCTGAAAATTGCGAGTGTA 57.865 42.857 0.00 0.00 0.00 2.90
2874 4241 6.377996 TCAAGATGCATTGGTATTTAGTTGCT 59.622 34.615 0.00 0.00 0.00 3.91
2911 4279 3.623703 TGAAGCACCAGCAATATGACAT 58.376 40.909 0.00 0.00 45.49 3.06
2938 4306 9.864034 GACTATTGTAATGTCGGTCATTTATTG 57.136 33.333 5.82 3.02 43.33 1.90
2942 4310 7.151999 TGTAATGTCGGTCATTTATTGCTTT 57.848 32.000 5.82 0.00 43.33 3.51
3189 4558 1.946768 CTTTCAACTCGGCAACTGGAA 59.053 47.619 0.00 0.00 0.00 3.53
3261 4631 1.592131 CGCAGCAAAAGCTTTGGCA 60.592 52.632 34.30 0.00 39.60 4.92
3513 4883 3.194005 GTACGTGACCATGATCCCATT 57.806 47.619 0.00 0.00 0.00 3.16
3532 4902 0.732538 TACACGCTGTGTCATGCTCG 60.733 55.000 15.75 0.00 43.92 5.03
3556 4926 2.108075 TCCATCCAGCAGAACCAGAAAA 59.892 45.455 0.00 0.00 0.00 2.29
3568 4938 0.457035 CCAGAAAACCCATGATGCCG 59.543 55.000 0.00 0.00 0.00 5.69
3598 4968 1.883084 CGCAGGCGGTAAGATGGAC 60.883 63.158 5.63 0.00 35.56 4.02
3625 4995 0.586319 CGGTCATTGTCGCACAAGTT 59.414 50.000 7.58 0.00 41.94 2.66
3724 5094 4.081752 TCACATTGGGATTGTTTATGTGGC 60.082 41.667 12.07 0.00 43.76 5.01
3728 5098 1.134175 GGGATTGTTTATGTGGCGTGG 59.866 52.381 0.00 0.00 0.00 4.94
3770 5140 0.178990 AACTGGAGAAAGTGGGTGGC 60.179 55.000 0.00 0.00 0.00 5.01
3899 5269 4.251268 ACTATACCGCAGTCCAAAGAAAC 58.749 43.478 0.00 0.00 0.00 2.78
3914 5284 7.857885 GTCCAAAGAAACTGAAGTGAAATGTAG 59.142 37.037 0.00 0.00 0.00 2.74
3915 5285 7.556275 TCCAAAGAAACTGAAGTGAAATGTAGT 59.444 33.333 0.00 0.00 0.00 2.73
3916 5286 8.836413 CCAAAGAAACTGAAGTGAAATGTAGTA 58.164 33.333 0.00 0.00 0.00 1.82
3917 5287 9.869844 CAAAGAAACTGAAGTGAAATGTAGTAG 57.130 33.333 0.00 0.00 0.00 2.57
3957 5327 4.022849 GTGTATAATTCCTGCAGATTGGGC 60.023 45.833 17.39 3.52 0.00 5.36
4004 5374 8.696374 ACTCTTTGAATATCGACTTATTCAGGA 58.304 33.333 16.83 16.67 44.89 3.86
4052 5423 9.307121 CTCGTTAAGACTCATGATCATTTAAGT 57.693 33.333 5.16 9.91 0.00 2.24
4063 5434 7.770433 TCATGATCATTTAAGTCTTGGATCGTT 59.230 33.333 5.16 0.00 35.17 3.85
4075 5446 6.431234 AGTCTTGGATCGTTAAGCTCATTTTT 59.569 34.615 0.00 0.00 0.00 1.94
4091 5462 9.005777 AGCTCATTTTTATTAACGGTACAGAAA 57.994 29.630 0.00 0.00 0.00 2.52
4119 5490 4.735662 TTGACCGGTTCATTAAAGTTCG 57.264 40.909 9.42 0.00 32.84 3.95
4127 5498 2.409012 TCATTAAAGTTCGCGAGCACA 58.591 42.857 24.99 6.40 0.00 4.57
4134 5505 0.739813 GTTCGCGAGCACATTAGGGT 60.740 55.000 18.62 0.00 0.00 4.34
4135 5506 0.739462 TTCGCGAGCACATTAGGGTG 60.739 55.000 9.59 0.00 41.72 4.61
4152 5523 0.605319 GTGACTCCAATTGGCGACCA 60.605 55.000 21.15 14.26 34.44 4.02
4154 5525 0.605319 GACTCCAATTGGCGACCACA 60.605 55.000 21.15 0.40 30.78 4.17
4157 5528 1.133025 CTCCAATTGGCGACCACATTC 59.867 52.381 20.33 0.00 30.78 2.67
4172 5544 2.356780 ATTCGGTCCGACCCAGTCC 61.357 63.158 15.07 0.00 34.89 3.85
4184 5556 0.032952 CCCAGTCCGTTTGAGTCGAA 59.967 55.000 0.00 0.00 0.00 3.71
4240 5631 1.976474 GCTTGACCCAAATCCGGCA 60.976 57.895 0.00 0.00 0.00 5.69
4241 5632 1.883021 CTTGACCCAAATCCGGCAC 59.117 57.895 0.00 0.00 0.00 5.01
4256 5647 1.587933 GGCACAAATTACGGCCGGAA 61.588 55.000 28.14 28.14 36.58 4.30
4283 5674 0.036952 CAGACGAACACTGGGCAGAT 60.037 55.000 0.00 0.00 0.00 2.90
4285 5676 0.320771 GACGAACACTGGGCAGATGT 60.321 55.000 0.00 0.00 0.00 3.06
4299 5690 1.898472 CAGATGTGTCTCCCTGTCTGT 59.102 52.381 0.00 0.00 30.42 3.41
4303 5694 0.832135 GTGTCTCCCTGTCTGTCCCA 60.832 60.000 0.00 0.00 0.00 4.37
4304 5695 0.117140 TGTCTCCCTGTCTGTCCCAT 59.883 55.000 0.00 0.00 0.00 4.00
4305 5696 1.280457 GTCTCCCTGTCTGTCCCATT 58.720 55.000 0.00 0.00 0.00 3.16
4306 5697 2.225522 TGTCTCCCTGTCTGTCCCATTA 60.226 50.000 0.00 0.00 0.00 1.90
4307 5698 2.838202 GTCTCCCTGTCTGTCCCATTAA 59.162 50.000 0.00 0.00 0.00 1.40
4308 5699 3.456277 GTCTCCCTGTCTGTCCCATTAAT 59.544 47.826 0.00 0.00 0.00 1.40
4309 5700 3.455910 TCTCCCTGTCTGTCCCATTAATG 59.544 47.826 8.58 8.58 0.00 1.90
4310 5701 3.189606 TCCCTGTCTGTCCCATTAATGT 58.810 45.455 14.25 0.00 0.00 2.71
4311 5702 3.054434 TCCCTGTCTGTCCCATTAATGTG 60.054 47.826 14.25 3.00 0.00 3.21
4312 5703 3.282021 CCTGTCTGTCCCATTAATGTGG 58.718 50.000 14.25 14.00 39.05 4.17
4313 5704 3.054434 CCTGTCTGTCCCATTAATGTGGA 60.054 47.826 17.04 17.04 42.02 4.02
4314 5705 4.567537 CCTGTCTGTCCCATTAATGTGGAA 60.568 45.833 20.63 13.15 42.02 3.53
4315 5706 4.588899 TGTCTGTCCCATTAATGTGGAAG 58.411 43.478 20.63 18.70 42.02 3.46
4316 5707 3.378427 GTCTGTCCCATTAATGTGGAAGC 59.622 47.826 20.63 13.26 42.02 3.86
4317 5708 2.689983 CTGTCCCATTAATGTGGAAGCC 59.310 50.000 20.63 12.76 42.02 4.35
4318 5709 1.676006 GTCCCATTAATGTGGAAGCCG 59.324 52.381 20.63 3.10 42.02 5.52
4319 5710 1.283613 TCCCATTAATGTGGAAGCCGT 59.716 47.619 18.10 0.00 42.02 5.68
4320 5711 1.405105 CCCATTAATGTGGAAGCCGTG 59.595 52.381 14.25 0.00 42.02 4.94
4321 5712 1.405105 CCATTAATGTGGAAGCCGTGG 59.595 52.381 14.25 0.00 42.02 4.94
4322 5713 2.364632 CATTAATGTGGAAGCCGTGGA 58.635 47.619 7.32 0.00 0.00 4.02
4323 5714 1.816074 TTAATGTGGAAGCCGTGGAC 58.184 50.000 0.00 0.00 0.00 4.02
4324 5715 0.035820 TAATGTGGAAGCCGTGGACC 60.036 55.000 0.00 0.00 0.00 4.46
4325 5716 2.063015 AATGTGGAAGCCGTGGACCA 62.063 55.000 0.00 0.00 0.00 4.02
4326 5717 2.358737 GTGGAAGCCGTGGACCAG 60.359 66.667 0.00 0.00 32.89 4.00
4327 5718 2.847234 TGGAAGCCGTGGACCAGT 60.847 61.111 0.00 0.00 0.00 4.00
4328 5719 2.047179 GGAAGCCGTGGACCAGTC 60.047 66.667 0.00 0.00 0.00 3.51
4338 5729 3.341263 GGACCAGTCCTTTTCCACC 57.659 57.895 9.67 0.00 46.16 4.61
4339 5730 0.605589 GGACCAGTCCTTTTCCACCG 60.606 60.000 9.67 0.00 46.16 4.94
4340 5731 1.228154 ACCAGTCCTTTTCCACCGC 60.228 57.895 0.00 0.00 0.00 5.68
4341 5732 1.971695 CCAGTCCTTTTCCACCGCC 60.972 63.158 0.00 0.00 0.00 6.13
4342 5733 2.032071 AGTCCTTTTCCACCGCCG 59.968 61.111 0.00 0.00 0.00 6.46
4343 5734 3.733960 GTCCTTTTCCACCGCCGC 61.734 66.667 0.00 0.00 0.00 6.53
4346 5737 3.431725 CTTTTCCACCGCCGCCTC 61.432 66.667 0.00 0.00 0.00 4.70
4356 5747 4.847444 GCCGCCTCCTTGAGCCTC 62.847 72.222 0.00 0.00 0.00 4.70
4357 5748 4.521062 CCGCCTCCTTGAGCCTCG 62.521 72.222 0.00 0.00 0.00 4.63
4358 5749 3.452786 CGCCTCCTTGAGCCTCGA 61.453 66.667 0.00 0.00 0.00 4.04
4359 5750 2.185608 GCCTCCTTGAGCCTCGAC 59.814 66.667 0.00 0.00 0.00 4.20
4360 5751 2.650116 GCCTCCTTGAGCCTCGACA 61.650 63.158 0.00 0.00 0.00 4.35
4361 5752 1.216710 CCTCCTTGAGCCTCGACAC 59.783 63.158 0.00 0.00 0.00 3.67
4362 5753 1.153939 CTCCTTGAGCCTCGACACG 60.154 63.158 0.00 0.00 0.00 4.49
4363 5754 2.811317 CCTTGAGCCTCGACACGC 60.811 66.667 0.00 0.00 0.00 5.34
4364 5755 2.049156 CTTGAGCCTCGACACGCA 60.049 61.111 0.00 0.00 0.00 5.24
4365 5756 1.446792 CTTGAGCCTCGACACGCAT 60.447 57.895 0.00 0.00 0.00 4.73
4366 5757 0.179137 CTTGAGCCTCGACACGCATA 60.179 55.000 0.00 0.00 0.00 3.14
4367 5758 0.457853 TTGAGCCTCGACACGCATAC 60.458 55.000 0.00 0.00 0.00 2.39
4368 5759 1.589196 GAGCCTCGACACGCATACC 60.589 63.158 0.00 0.00 0.00 2.73
4369 5760 2.585247 GCCTCGACACGCATACCC 60.585 66.667 0.00 0.00 0.00 3.69
4370 5761 3.077519 GCCTCGACACGCATACCCT 62.078 63.158 0.00 0.00 0.00 4.34
4371 5762 1.731433 GCCTCGACACGCATACCCTA 61.731 60.000 0.00 0.00 0.00 3.53
4372 5763 0.311165 CCTCGACACGCATACCCTAG 59.689 60.000 0.00 0.00 0.00 3.02
4373 5764 0.317938 CTCGACACGCATACCCTAGC 60.318 60.000 0.00 0.00 0.00 3.42
4374 5765 0.750546 TCGACACGCATACCCTAGCT 60.751 55.000 0.00 0.00 0.00 3.32
4375 5766 0.317938 CGACACGCATACCCTAGCTC 60.318 60.000 0.00 0.00 0.00 4.09
4376 5767 0.032267 GACACGCATACCCTAGCTCC 59.968 60.000 0.00 0.00 0.00 4.70
4377 5768 0.686441 ACACGCATACCCTAGCTCCA 60.686 55.000 0.00 0.00 0.00 3.86
4378 5769 0.032678 CACGCATACCCTAGCTCCAG 59.967 60.000 0.00 0.00 0.00 3.86
4379 5770 0.397254 ACGCATACCCTAGCTCCAGT 60.397 55.000 0.00 0.00 0.00 4.00
4380 5771 0.315568 CGCATACCCTAGCTCCAGTC 59.684 60.000 0.00 0.00 0.00 3.51
4381 5772 0.315568 GCATACCCTAGCTCCAGTCG 59.684 60.000 0.00 0.00 0.00 4.18
4382 5773 0.315568 CATACCCTAGCTCCAGTCGC 59.684 60.000 0.00 0.00 0.00 5.19
4383 5774 0.828343 ATACCCTAGCTCCAGTCGCC 60.828 60.000 0.00 0.00 0.00 5.54
4384 5775 1.934459 TACCCTAGCTCCAGTCGCCT 61.934 60.000 0.00 0.00 0.00 5.52
4385 5776 2.494530 CCCTAGCTCCAGTCGCCTC 61.495 68.421 0.00 0.00 0.00 4.70
4386 5777 1.454847 CCTAGCTCCAGTCGCCTCT 60.455 63.158 0.00 0.00 0.00 3.69
4387 5778 1.452145 CCTAGCTCCAGTCGCCTCTC 61.452 65.000 0.00 0.00 0.00 3.20
4388 5779 1.452145 CTAGCTCCAGTCGCCTCTCC 61.452 65.000 0.00 0.00 0.00 3.71
4389 5780 4.200283 GCTCCAGTCGCCTCTCCG 62.200 72.222 0.00 0.00 0.00 4.63
4390 5781 2.752238 CTCCAGTCGCCTCTCCGT 60.752 66.667 0.00 0.00 0.00 4.69
4391 5782 2.750637 TCCAGTCGCCTCTCCGTC 60.751 66.667 0.00 0.00 0.00 4.79
4392 5783 3.827898 CCAGTCGCCTCTCCGTCC 61.828 72.222 0.00 0.00 0.00 4.79
4393 5784 2.752238 CAGTCGCCTCTCCGTCCT 60.752 66.667 0.00 0.00 0.00 3.85
4394 5785 2.438795 AGTCGCCTCTCCGTCCTC 60.439 66.667 0.00 0.00 0.00 3.71
4395 5786 2.750637 GTCGCCTCTCCGTCCTCA 60.751 66.667 0.00 0.00 0.00 3.86
4396 5787 2.750637 TCGCCTCTCCGTCCTCAC 60.751 66.667 0.00 0.00 0.00 3.51
4397 5788 2.752238 CGCCTCTCCGTCCTCACT 60.752 66.667 0.00 0.00 0.00 3.41
4398 5789 2.766400 CGCCTCTCCGTCCTCACTC 61.766 68.421 0.00 0.00 0.00 3.51
4399 5790 2.419739 GCCTCTCCGTCCTCACTCC 61.420 68.421 0.00 0.00 0.00 3.85
4400 5791 1.755008 CCTCTCCGTCCTCACTCCC 60.755 68.421 0.00 0.00 0.00 4.30
4401 5792 1.304952 CTCTCCGTCCTCACTCCCT 59.695 63.158 0.00 0.00 0.00 4.20
4402 5793 0.750182 CTCTCCGTCCTCACTCCCTC 60.750 65.000 0.00 0.00 0.00 4.30
4403 5794 1.755008 CTCCGTCCTCACTCCCTCC 60.755 68.421 0.00 0.00 0.00 4.30
4404 5795 3.141488 CCGTCCTCACTCCCTCCG 61.141 72.222 0.00 0.00 0.00 4.63
4405 5796 3.141488 CGTCCTCACTCCCTCCGG 61.141 72.222 0.00 0.00 0.00 5.14
4406 5797 3.462678 GTCCTCACTCCCTCCGGC 61.463 72.222 0.00 0.00 0.00 6.13
4407 5798 4.779733 TCCTCACTCCCTCCGGCC 62.780 72.222 0.00 0.00 0.00 6.13
4432 5823 3.568000 CCGTCATGGGAATGTGGAA 57.432 52.632 0.00 0.00 0.00 3.53
4433 5824 1.382522 CCGTCATGGGAATGTGGAAG 58.617 55.000 0.00 0.00 0.00 3.46
4434 5825 1.340017 CCGTCATGGGAATGTGGAAGT 60.340 52.381 0.00 0.00 0.00 3.01
4435 5826 1.739466 CGTCATGGGAATGTGGAAGTG 59.261 52.381 0.00 0.00 0.00 3.16
4436 5827 2.615240 CGTCATGGGAATGTGGAAGTGA 60.615 50.000 0.00 0.00 0.00 3.41
4437 5828 3.420893 GTCATGGGAATGTGGAAGTGAA 58.579 45.455 0.00 0.00 0.00 3.18
4438 5829 4.019174 GTCATGGGAATGTGGAAGTGAAT 58.981 43.478 0.00 0.00 0.00 2.57
4439 5830 4.096984 GTCATGGGAATGTGGAAGTGAATC 59.903 45.833 0.00 0.00 0.00 2.52
4440 5831 3.085952 TGGGAATGTGGAAGTGAATCC 57.914 47.619 0.00 0.00 40.10 3.01
4441 5832 2.291540 TGGGAATGTGGAAGTGAATCCC 60.292 50.000 0.00 0.00 44.31 3.85
4442 5833 2.379005 GGAATGTGGAAGTGAATCCCC 58.621 52.381 0.00 0.00 38.82 4.81
4443 5834 2.017049 GAATGTGGAAGTGAATCCCCG 58.983 52.381 0.00 0.00 38.82 5.73
4444 5835 0.255890 ATGTGGAAGTGAATCCCCGG 59.744 55.000 0.00 0.00 38.82 5.73
4445 5836 1.749258 GTGGAAGTGAATCCCCGGC 60.749 63.158 0.00 0.00 38.82 6.13
4446 5837 2.513897 GGAAGTGAATCCCCGGCG 60.514 66.667 0.00 0.00 33.05 6.46
4447 5838 2.582436 GAAGTGAATCCCCGGCGA 59.418 61.111 9.30 0.00 0.00 5.54
4448 5839 1.521681 GAAGTGAATCCCCGGCGAG 60.522 63.158 9.30 0.00 0.00 5.03
4449 5840 1.956629 GAAGTGAATCCCCGGCGAGA 61.957 60.000 9.30 5.03 0.00 4.04
4450 5841 1.550130 AAGTGAATCCCCGGCGAGAA 61.550 55.000 9.30 0.00 0.00 2.87
4451 5842 1.521681 GTGAATCCCCGGCGAGAAG 60.522 63.158 9.30 0.00 0.00 2.85
4452 5843 2.109181 GAATCCCCGGCGAGAAGG 59.891 66.667 9.30 0.00 0.00 3.46
4457 5848 4.162690 CCCGGCGAGAAGGGGAAG 62.163 72.222 9.30 0.00 44.10 3.46
4458 5849 4.840005 CCGGCGAGAAGGGGAAGC 62.840 72.222 9.30 0.00 0.00 3.86
4459 5850 4.082523 CGGCGAGAAGGGGAAGCA 62.083 66.667 0.00 0.00 0.00 3.91
4460 5851 2.436824 GGCGAGAAGGGGAAGCAC 60.437 66.667 0.00 0.00 0.00 4.40
4461 5852 2.815647 GCGAGAAGGGGAAGCACG 60.816 66.667 0.00 0.00 0.00 5.34
4462 5853 2.970639 CGAGAAGGGGAAGCACGA 59.029 61.111 0.00 0.00 0.00 4.35
4463 5854 1.446272 CGAGAAGGGGAAGCACGAC 60.446 63.158 0.00 0.00 0.00 4.34
4464 5855 1.079057 GAGAAGGGGAAGCACGACC 60.079 63.158 0.00 0.00 0.00 4.79
4465 5856 1.827399 GAGAAGGGGAAGCACGACCA 61.827 60.000 0.00 0.00 0.00 4.02
4466 5857 1.671379 GAAGGGGAAGCACGACCAC 60.671 63.158 0.00 0.00 0.00 4.16
4467 5858 3.530910 AAGGGGAAGCACGACCACG 62.531 63.158 0.00 0.00 45.75 4.94
4468 5859 3.998672 GGGGAAGCACGACCACGA 61.999 66.667 0.00 0.00 42.66 4.35
4469 5860 2.432628 GGGAAGCACGACCACGAG 60.433 66.667 0.00 0.00 42.66 4.18
4470 5861 2.432628 GGAAGCACGACCACGAGG 60.433 66.667 0.00 0.00 42.66 4.63
4471 5862 3.112709 GAAGCACGACCACGAGGC 61.113 66.667 0.00 0.00 42.66 4.70
4472 5863 4.681978 AAGCACGACCACGAGGCC 62.682 66.667 0.00 0.00 41.28 5.19
4478 5869 4.754667 GACCACGAGGCCGGTTCC 62.755 72.222 1.90 0.00 40.78 3.62
4489 5880 4.078516 CGGTTCCTCCCCCACGTC 62.079 72.222 0.00 0.00 0.00 4.34
4490 5881 4.078516 GGTTCCTCCCCCACGTCG 62.079 72.222 0.00 0.00 0.00 5.12
4491 5882 3.308705 GTTCCTCCCCCACGTCGT 61.309 66.667 0.00 0.00 0.00 4.34
4492 5883 2.993264 TTCCTCCCCCACGTCGTC 60.993 66.667 0.00 0.00 0.00 4.20
4493 5884 3.518552 TTCCTCCCCCACGTCGTCT 62.519 63.158 0.00 0.00 0.00 4.18
4494 5885 3.760035 CCTCCCCCACGTCGTCTG 61.760 72.222 0.00 0.00 0.00 3.51
4495 5886 3.760035 CTCCCCCACGTCGTCTGG 61.760 72.222 0.00 0.00 0.00 3.86
4500 5891 4.778415 CCACGTCGTCTGGGAGCG 62.778 72.222 0.00 0.00 0.00 5.03
4513 5904 4.828925 GAGCGCTGCCCTCTCCAC 62.829 72.222 18.48 0.00 0.00 4.02
4516 5907 4.154347 CGCTGCCCTCTCCACCTC 62.154 72.222 0.00 0.00 0.00 3.85
4517 5908 4.154347 GCTGCCCTCTCCACCTCG 62.154 72.222 0.00 0.00 0.00 4.63
4518 5909 2.681778 CTGCCCTCTCCACCTCGT 60.682 66.667 0.00 0.00 0.00 4.18
4519 5910 2.203788 TGCCCTCTCCACCTCGTT 60.204 61.111 0.00 0.00 0.00 3.85
4520 5911 2.266055 GCCCTCTCCACCTCGTTG 59.734 66.667 0.00 0.00 0.00 4.10
4521 5912 2.266055 CCCTCTCCACCTCGTTGC 59.734 66.667 0.00 0.00 0.00 4.17
4522 5913 2.266055 CCTCTCCACCTCGTTGCC 59.734 66.667 0.00 0.00 0.00 4.52
4523 5914 2.266055 CTCTCCACCTCGTTGCCC 59.734 66.667 0.00 0.00 0.00 5.36
4524 5915 2.525629 TCTCCACCTCGTTGCCCA 60.526 61.111 0.00 0.00 0.00 5.36
4525 5916 2.358737 CTCCACCTCGTTGCCCAC 60.359 66.667 0.00 0.00 0.00 4.61
4526 5917 3.901797 CTCCACCTCGTTGCCCACC 62.902 68.421 0.00 0.00 0.00 4.61
4527 5918 3.953775 CCACCTCGTTGCCCACCT 61.954 66.667 0.00 0.00 0.00 4.00
4528 5919 2.113139 CACCTCGTTGCCCACCTT 59.887 61.111 0.00 0.00 0.00 3.50
4529 5920 1.966451 CACCTCGTTGCCCACCTTC 60.966 63.158 0.00 0.00 0.00 3.46
4530 5921 2.147387 ACCTCGTTGCCCACCTTCT 61.147 57.895 0.00 0.00 0.00 2.85
4531 5922 1.376037 CCTCGTTGCCCACCTTCTC 60.376 63.158 0.00 0.00 0.00 2.87
4532 5923 1.376037 CTCGTTGCCCACCTTCTCC 60.376 63.158 0.00 0.00 0.00 3.71
4533 5924 2.742372 CGTTGCCCACCTTCTCCG 60.742 66.667 0.00 0.00 0.00 4.63
4534 5925 2.430367 GTTGCCCACCTTCTCCGT 59.570 61.111 0.00 0.00 0.00 4.69
4535 5926 1.671379 GTTGCCCACCTTCTCCGTC 60.671 63.158 0.00 0.00 0.00 4.79
4536 5927 1.841556 TTGCCCACCTTCTCCGTCT 60.842 57.895 0.00 0.00 0.00 4.18
4537 5928 1.827399 TTGCCCACCTTCTCCGTCTC 61.827 60.000 0.00 0.00 0.00 3.36
4538 5929 3.020237 GCCCACCTTCTCCGTCTCC 62.020 68.421 0.00 0.00 0.00 3.71
4539 5930 2.359967 CCCACCTTCTCCGTCTCCC 61.360 68.421 0.00 0.00 0.00 4.30
4540 5931 2.359967 CCACCTTCTCCGTCTCCCC 61.360 68.421 0.00 0.00 0.00 4.81
4541 5932 2.362632 ACCTTCTCCGTCTCCCCG 60.363 66.667 0.00 0.00 0.00 5.73
4542 5933 3.839432 CCTTCTCCGTCTCCCCGC 61.839 72.222 0.00 0.00 0.00 6.13
4543 5934 3.839432 CTTCTCCGTCTCCCCGCC 61.839 72.222 0.00 0.00 0.00 6.13
4559 5950 4.082523 CCGATGGCCTCACCGTGT 62.083 66.667 3.32 0.00 43.94 4.49
4560 5951 2.815211 CGATGGCCTCACCGTGTG 60.815 66.667 3.32 0.00 43.94 3.82
4561 5952 2.347490 GATGGCCTCACCGTGTGT 59.653 61.111 3.32 0.00 43.94 3.72
4562 5953 2.032528 ATGGCCTCACCGTGTGTG 59.967 61.111 3.32 2.48 46.88 3.82
4563 5954 4.927782 TGGCCTCACCGTGTGTGC 62.928 66.667 3.32 2.52 45.03 4.57
4571 5962 3.101428 CCGTGTGTGCGGTCGTAC 61.101 66.667 4.72 4.72 46.11 3.67
4572 5963 3.455195 CGTGTGTGCGGTCGTACG 61.455 66.667 9.53 9.53 33.40 3.67
4573 5964 2.353839 GTGTGTGCGGTCGTACGT 60.354 61.111 16.05 0.00 35.98 3.57
4574 5965 2.051076 TGTGTGCGGTCGTACGTC 60.051 61.111 16.05 9.80 35.98 4.34
4575 5966 2.051076 GTGTGCGGTCGTACGTCA 60.051 61.111 16.05 6.66 35.98 4.35
4576 5967 1.658102 GTGTGCGGTCGTACGTCAA 60.658 57.895 16.05 0.00 35.98 3.18
4577 5968 1.370778 TGTGCGGTCGTACGTCAAG 60.371 57.895 16.05 8.80 35.98 3.02
4578 5969 2.084681 GTGCGGTCGTACGTCAAGG 61.085 63.158 16.05 4.30 35.98 3.61
4579 5970 3.177249 GCGGTCGTACGTCAAGGC 61.177 66.667 16.05 10.44 35.98 4.35
4580 5971 2.872925 CGGTCGTACGTCAAGGCG 60.873 66.667 16.05 4.90 37.94 5.52
4581 5972 2.505557 GGTCGTACGTCAAGGCGG 60.506 66.667 16.05 0.00 35.98 6.13
4582 5973 2.562912 GTCGTACGTCAAGGCGGA 59.437 61.111 16.05 0.00 35.98 5.54
4583 5974 1.513586 GTCGTACGTCAAGGCGGAG 60.514 63.158 16.05 0.00 35.98 4.63
4584 5975 1.672030 TCGTACGTCAAGGCGGAGA 60.672 57.895 16.05 0.00 35.98 3.71
4585 5976 1.028330 TCGTACGTCAAGGCGGAGAT 61.028 55.000 16.05 0.00 35.98 2.75
4586 5977 0.591741 CGTACGTCAAGGCGGAGATC 60.592 60.000 7.22 0.00 35.98 2.75
4587 5978 0.739561 GTACGTCAAGGCGGAGATCT 59.260 55.000 0.00 0.00 35.98 2.75
4588 5979 0.738975 TACGTCAAGGCGGAGATCTG 59.261 55.000 0.00 0.00 35.98 2.90
4596 5987 4.218578 CGGAGATCTGCCAGCGCT 62.219 66.667 2.64 2.64 35.36 5.92
4597 5988 2.849964 CGGAGATCTGCCAGCGCTA 61.850 63.158 10.99 0.00 35.36 4.26
4598 5989 1.300542 GGAGATCTGCCAGCGCTAC 60.301 63.158 10.99 6.05 35.36 3.58
4599 5990 1.300542 GAGATCTGCCAGCGCTACC 60.301 63.158 10.99 4.25 35.36 3.18
4600 5991 2.659897 GATCTGCCAGCGCTACCG 60.660 66.667 10.99 1.58 35.36 4.02
4601 5992 4.227134 ATCTGCCAGCGCTACCGG 62.227 66.667 10.99 9.13 35.36 5.28
4630 6021 4.980805 GCCGTTGCCGTGGAGTGA 62.981 66.667 0.00 0.00 0.00 3.41
4631 6022 3.041940 CCGTTGCCGTGGAGTGAC 61.042 66.667 0.00 0.00 0.00 3.67
4632 6023 3.403057 CGTTGCCGTGGAGTGACG 61.403 66.667 0.00 0.00 39.13 4.35
4633 6024 2.279918 GTTGCCGTGGAGTGACGT 60.280 61.111 0.00 0.00 37.66 4.34
4634 6025 2.279851 TTGCCGTGGAGTGACGTG 60.280 61.111 0.00 0.00 37.66 4.49
4635 6026 4.961511 TGCCGTGGAGTGACGTGC 62.962 66.667 0.00 0.00 37.66 5.34
4636 6027 4.961511 GCCGTGGAGTGACGTGCA 62.962 66.667 0.00 0.00 37.66 4.57
4637 6028 2.048222 CCGTGGAGTGACGTGCAT 60.048 61.111 0.00 0.00 37.66 3.96
4638 6029 2.094659 CCGTGGAGTGACGTGCATC 61.095 63.158 0.00 0.00 37.66 3.91
4639 6030 1.080501 CGTGGAGTGACGTGCATCT 60.081 57.895 0.00 0.00 34.56 2.90
4640 6031 1.073216 CGTGGAGTGACGTGCATCTC 61.073 60.000 0.00 1.53 34.56 2.75
4641 6032 0.737715 GTGGAGTGACGTGCATCTCC 60.738 60.000 18.35 18.35 41.37 3.71
4642 6033 1.153549 GGAGTGACGTGCATCTCCC 60.154 63.158 0.00 0.06 38.13 4.30
4643 6034 1.153549 GAGTGACGTGCATCTCCCC 60.154 63.158 0.00 0.00 0.00 4.81
4644 6035 1.888436 GAGTGACGTGCATCTCCCCA 61.888 60.000 0.00 0.00 0.00 4.96
4645 6036 1.003839 GTGACGTGCATCTCCCCAA 60.004 57.895 0.00 0.00 0.00 4.12
4646 6037 0.605319 GTGACGTGCATCTCCCCAAA 60.605 55.000 0.00 0.00 0.00 3.28
4647 6038 0.109532 TGACGTGCATCTCCCCAAAA 59.890 50.000 0.00 0.00 0.00 2.44
4648 6039 1.243902 GACGTGCATCTCCCCAAAAA 58.756 50.000 0.00 0.00 0.00 1.94
4649 6040 0.958822 ACGTGCATCTCCCCAAAAAC 59.041 50.000 0.00 0.00 0.00 2.43
4650 6041 1.247567 CGTGCATCTCCCCAAAAACT 58.752 50.000 0.00 0.00 0.00 2.66
4651 6042 2.224670 ACGTGCATCTCCCCAAAAACTA 60.225 45.455 0.00 0.00 0.00 2.24
4652 6043 2.817258 CGTGCATCTCCCCAAAAACTAA 59.183 45.455 0.00 0.00 0.00 2.24
4653 6044 3.365969 CGTGCATCTCCCCAAAAACTAAC 60.366 47.826 0.00 0.00 0.00 2.34
4654 6045 3.572255 GTGCATCTCCCCAAAAACTAACA 59.428 43.478 0.00 0.00 0.00 2.41
4655 6046 3.572255 TGCATCTCCCCAAAAACTAACAC 59.428 43.478 0.00 0.00 0.00 3.32
4656 6047 3.056821 GCATCTCCCCAAAAACTAACACC 60.057 47.826 0.00 0.00 0.00 4.16
4657 6048 4.407365 CATCTCCCCAAAAACTAACACCT 58.593 43.478 0.00 0.00 0.00 4.00
4658 6049 4.094830 TCTCCCCAAAAACTAACACCTC 57.905 45.455 0.00 0.00 0.00 3.85
4659 6050 2.812011 CTCCCCAAAAACTAACACCTCG 59.188 50.000 0.00 0.00 0.00 4.63
4660 6051 1.883926 CCCCAAAAACTAACACCTCGG 59.116 52.381 0.00 0.00 0.00 4.63
4661 6052 1.268625 CCCAAAAACTAACACCTCGGC 59.731 52.381 0.00 0.00 0.00 5.54
4662 6053 1.268625 CCAAAAACTAACACCTCGGCC 59.731 52.381 0.00 0.00 0.00 6.13
4663 6054 1.268625 CAAAAACTAACACCTCGGCCC 59.731 52.381 0.00 0.00 0.00 5.80
4664 6055 0.475044 AAAACTAACACCTCGGCCCA 59.525 50.000 0.00 0.00 0.00 5.36
4665 6056 0.036306 AAACTAACACCTCGGCCCAG 59.964 55.000 0.00 0.00 0.00 4.45
4666 6057 0.834687 AACTAACACCTCGGCCCAGA 60.835 55.000 0.00 0.00 0.00 3.86
4667 6058 0.617820 ACTAACACCTCGGCCCAGAT 60.618 55.000 0.00 0.00 0.00 2.90
4668 6059 0.105039 CTAACACCTCGGCCCAGATC 59.895 60.000 0.00 0.00 0.00 2.75
4669 6060 1.672854 TAACACCTCGGCCCAGATCG 61.673 60.000 0.00 0.00 0.00 3.69
4670 6061 4.227134 CACCTCGGCCCAGATCGG 62.227 72.222 0.00 0.00 0.00 4.18
4712 6103 4.166888 GCCGCCTGCTGGAGATCA 62.167 66.667 14.77 0.00 34.95 2.92
4713 6104 2.586245 CCGCCTGCTGGAGATCAA 59.414 61.111 14.77 0.00 34.95 2.57
4714 6105 1.817099 CCGCCTGCTGGAGATCAAC 60.817 63.158 14.77 0.00 34.95 3.18
4715 6106 1.817099 CGCCTGCTGGAGATCAACC 60.817 63.158 14.77 0.00 34.95 3.77
4716 6107 1.817099 GCCTGCTGGAGATCAACCG 60.817 63.158 14.77 0.00 34.57 4.44
4717 6108 1.817099 CCTGCTGGAGATCAACCGC 60.817 63.158 2.92 7.07 34.57 5.68
4718 6109 1.817099 CTGCTGGAGATCAACCGCC 60.817 63.158 16.14 7.19 0.00 6.13
4719 6110 2.892425 GCTGGAGATCAACCGCCG 60.892 66.667 0.00 0.00 0.00 6.46
4720 6111 2.579201 CTGGAGATCAACCGCCGT 59.421 61.111 0.00 0.00 0.00 5.68
4721 6112 1.519455 CTGGAGATCAACCGCCGTC 60.519 63.158 0.00 0.00 0.00 4.79
4722 6113 2.582498 GGAGATCAACCGCCGTCG 60.582 66.667 0.00 0.00 0.00 5.12
4723 6114 2.181021 GAGATCAACCGCCGTCGT 59.819 61.111 0.00 0.00 0.00 4.34
4724 6115 2.126071 AGATCAACCGCCGTCGTG 60.126 61.111 0.00 0.00 0.00 4.35
4725 6116 3.849953 GATCAACCGCCGTCGTGC 61.850 66.667 0.00 0.00 0.00 5.34
4739 6130 4.785453 GTGCCCGCCTTCCTCCTG 62.785 72.222 0.00 0.00 0.00 3.86
4741 6132 4.475135 GCCCGCCTTCCTCCTGAC 62.475 72.222 0.00 0.00 0.00 3.51
4742 6133 3.787001 CCCGCCTTCCTCCTGACC 61.787 72.222 0.00 0.00 0.00 4.02
4743 6134 2.685380 CCGCCTTCCTCCTGACCT 60.685 66.667 0.00 0.00 0.00 3.85
4744 6135 2.726351 CCGCCTTCCTCCTGACCTC 61.726 68.421 0.00 0.00 0.00 3.85
4745 6136 2.896443 GCCTTCCTCCTGACCTCG 59.104 66.667 0.00 0.00 0.00 4.63
4746 6137 1.985116 GCCTTCCTCCTGACCTCGT 60.985 63.158 0.00 0.00 0.00 4.18
4747 6138 1.950973 GCCTTCCTCCTGACCTCGTC 61.951 65.000 0.00 0.00 0.00 4.20
4748 6139 0.612174 CCTTCCTCCTGACCTCGTCA 60.612 60.000 0.00 0.00 40.50 4.35
4755 6146 3.870955 TGACCTCGTCAGCCACTT 58.129 55.556 0.00 0.00 37.67 3.16
4756 6147 1.367471 TGACCTCGTCAGCCACTTG 59.633 57.895 0.00 0.00 37.67 3.16
4757 6148 1.112916 TGACCTCGTCAGCCACTTGA 61.113 55.000 0.00 0.00 37.67 3.02
4758 6149 0.389166 GACCTCGTCAGCCACTTGAG 60.389 60.000 0.00 0.00 32.09 3.02
4759 6150 0.827925 ACCTCGTCAGCCACTTGAGA 60.828 55.000 0.00 0.00 0.00 3.27
4760 6151 0.534412 CCTCGTCAGCCACTTGAGAT 59.466 55.000 0.00 0.00 0.00 2.75
4761 6152 1.751351 CCTCGTCAGCCACTTGAGATA 59.249 52.381 0.00 0.00 0.00 1.98
4762 6153 2.480416 CCTCGTCAGCCACTTGAGATAC 60.480 54.545 0.00 0.00 0.00 2.24
4763 6154 1.476891 TCGTCAGCCACTTGAGATACC 59.523 52.381 0.00 0.00 0.00 2.73
4764 6155 1.471676 CGTCAGCCACTTGAGATACCC 60.472 57.143 0.00 0.00 0.00 3.69
4765 6156 0.824109 TCAGCCACTTGAGATACCCG 59.176 55.000 0.00 0.00 0.00 5.28
4766 6157 0.537188 CAGCCACTTGAGATACCCGT 59.463 55.000 0.00 0.00 0.00 5.28
4767 6158 0.824759 AGCCACTTGAGATACCCGTC 59.175 55.000 0.00 0.00 0.00 4.79
4768 6159 0.527817 GCCACTTGAGATACCCGTCG 60.528 60.000 0.00 0.00 0.00 5.12
4769 6160 1.100510 CCACTTGAGATACCCGTCGA 58.899 55.000 0.00 0.00 0.00 4.20
4770 6161 1.475280 CCACTTGAGATACCCGTCGAA 59.525 52.381 0.00 0.00 0.00 3.71
4771 6162 2.100916 CCACTTGAGATACCCGTCGAAT 59.899 50.000 0.00 0.00 0.00 3.34
4772 6163 3.372954 CACTTGAGATACCCGTCGAATC 58.627 50.000 0.00 0.00 0.00 2.52
4773 6164 2.361438 ACTTGAGATACCCGTCGAATCC 59.639 50.000 0.00 0.00 0.00 3.01
4774 6165 1.325355 TGAGATACCCGTCGAATCCC 58.675 55.000 0.00 0.00 0.00 3.85
4775 6166 0.602060 GAGATACCCGTCGAATCCCC 59.398 60.000 0.00 0.00 0.00 4.81
4776 6167 0.830866 AGATACCCGTCGAATCCCCC 60.831 60.000 0.00 0.00 0.00 5.40
4777 6168 1.075076 ATACCCGTCGAATCCCCCA 60.075 57.895 0.00 0.00 0.00 4.96
4778 6169 0.473117 ATACCCGTCGAATCCCCCAT 60.473 55.000 0.00 0.00 0.00 4.00
4779 6170 1.404479 TACCCGTCGAATCCCCCATG 61.404 60.000 0.00 0.00 0.00 3.66
4780 6171 2.742116 CCCGTCGAATCCCCCATGT 61.742 63.158 0.00 0.00 0.00 3.21
4781 6172 1.523711 CCGTCGAATCCCCCATGTG 60.524 63.158 0.00 0.00 0.00 3.21
4782 6173 1.523711 CGTCGAATCCCCCATGTGG 60.524 63.158 0.00 0.00 0.00 4.17
4792 6183 2.429930 CCATGTGGGACGTGTGGT 59.570 61.111 0.00 0.00 40.01 4.16
4793 6184 1.228124 CCATGTGGGACGTGTGGTT 60.228 57.895 0.00 0.00 40.01 3.67
4794 6185 1.234615 CCATGTGGGACGTGTGGTTC 61.235 60.000 0.00 0.00 40.01 3.62
4795 6186 1.072505 ATGTGGGACGTGTGGTTCC 59.927 57.895 0.00 0.00 45.60 3.62
4798 6189 3.144285 GGGACGTGTGGTTCCAGA 58.856 61.111 0.00 0.00 44.64 3.86
4799 6190 1.448497 GGGACGTGTGGTTCCAGAA 59.552 57.895 0.00 0.00 44.64 3.02
4800 6191 0.883370 GGGACGTGTGGTTCCAGAAC 60.883 60.000 0.00 1.77 44.64 3.01
4801 6192 1.219522 GGACGTGTGGTTCCAGAACG 61.220 60.000 18.96 18.96 42.02 3.95
4802 6193 0.249155 GACGTGTGGTTCCAGAACGA 60.249 55.000 24.18 0.00 42.02 3.85
4803 6194 0.249322 ACGTGTGGTTCCAGAACGAG 60.249 55.000 24.18 7.05 42.02 4.18
4804 6195 1.557443 CGTGTGGTTCCAGAACGAGC 61.557 60.000 16.90 0.00 42.02 5.03
4805 6196 0.531974 GTGTGGTTCCAGAACGAGCA 60.532 55.000 4.54 1.34 42.02 4.26
4806 6197 0.396435 TGTGGTTCCAGAACGAGCAT 59.604 50.000 4.54 0.00 42.02 3.79
4807 6198 0.798776 GTGGTTCCAGAACGAGCATG 59.201 55.000 4.54 0.00 42.02 4.06
4808 6199 0.684535 TGGTTCCAGAACGAGCATGA 59.315 50.000 0.00 0.00 42.02 3.07
4809 6200 1.079503 GGTTCCAGAACGAGCATGAC 58.920 55.000 0.00 0.00 42.02 3.06
4810 6201 1.079503 GTTCCAGAACGAGCATGACC 58.920 55.000 0.00 0.00 0.00 4.02
4811 6202 0.976641 TTCCAGAACGAGCATGACCT 59.023 50.000 0.00 0.00 0.00 3.85
4812 6203 0.247460 TCCAGAACGAGCATGACCTG 59.753 55.000 0.00 0.00 0.00 4.00
4813 6204 0.036952 CCAGAACGAGCATGACCTGT 60.037 55.000 0.00 0.00 0.00 4.00
4814 6205 1.073964 CAGAACGAGCATGACCTGTG 58.926 55.000 0.00 0.00 0.00 3.66
4815 6206 0.681733 AGAACGAGCATGACCTGTGT 59.318 50.000 0.00 0.00 0.00 3.72
4816 6207 1.071605 GAACGAGCATGACCTGTGTC 58.928 55.000 0.00 0.00 42.12 3.67
4817 6208 0.667487 AACGAGCATGACCTGTGTCG 60.667 55.000 0.00 0.00 44.86 4.35
4818 6209 1.807165 CGAGCATGACCTGTGTCGG 60.807 63.158 0.00 0.00 44.86 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.162666 TGTACTCCAAGGACATCTTCGT 58.837 45.455 0.00 0.00 32.41 3.85
32 33 1.371183 CCCTGCCGAAGACTTGACA 59.629 57.895 0.00 0.00 0.00 3.58
36 37 2.930562 AGCCCCTGCCGAAGACTT 60.931 61.111 0.00 0.00 38.69 3.01
47 48 1.194781 ACGTGATCAAGACAGCCCCT 61.195 55.000 15.90 0.00 0.00 4.79
49 50 1.078759 CGACGTGATCAAGACAGCCC 61.079 60.000 15.90 0.00 0.00 5.19
71 72 1.657751 GGAATCCGGAAGCCTTGCAC 61.658 60.000 9.01 0.00 0.00 4.57
72 73 1.378514 GGAATCCGGAAGCCTTGCA 60.379 57.895 9.01 0.00 0.00 4.08
73 74 0.681243 AAGGAATCCGGAAGCCTTGC 60.681 55.000 29.90 17.15 39.18 4.01
74 75 1.383523 GAAGGAATCCGGAAGCCTTG 58.616 55.000 33.46 0.00 40.64 3.61
75 76 0.256177 GGAAGGAATCCGGAAGCCTT 59.744 55.000 30.53 30.53 43.09 4.35
87 88 4.585879 CCCTCATTTTCGTAAGGAAGGAA 58.414 43.478 0.00 0.00 35.29 3.36
98 99 1.338020 GCTTATGGGCCCTCATTTTCG 59.662 52.381 25.70 4.28 0.00 3.46
101 102 3.539338 GGCTTATGGGCCCTCATTT 57.461 52.632 25.70 5.15 45.92 2.32
129 130 0.400594 AACCTACTTGGCCCACAGTC 59.599 55.000 0.00 0.00 40.22 3.51
133 134 4.415783 CCAACCTACTTGGCCCAC 57.584 61.111 0.00 0.00 43.37 4.61
163 164 2.291209 TTACCACTGACGGTGTCCTA 57.709 50.000 13.35 0.00 43.94 2.94
418 419 5.050567 GTCCTTTATAAATGGCGACCTTACG 60.051 44.000 0.00 0.00 0.00 3.18
426 427 5.584649 TGAACTCAGTCCTTTATAAATGGCG 59.415 40.000 0.00 0.00 0.00 5.69
478 479 5.070180 TGATTGAAGGCAAACCAATTGAGAA 59.930 36.000 7.12 0.00 41.85 2.87
528 529 3.256631 GGACATGGTTGAAAGTGCATCTT 59.743 43.478 0.00 0.00 38.10 2.40
533 534 0.240945 CCGGACATGGTTGAAAGTGC 59.759 55.000 0.00 0.00 0.00 4.40
584 585 9.376075 TGTCTGTAATTGCTGAAAAATTCAAAA 57.624 25.926 4.75 0.00 39.58 2.44
772 777 6.936279 ACATCTTCGTAGAGATTTTTGAGGA 58.064 36.000 0.00 0.00 38.43 3.71
783 788 8.244494 TCTTTGATTCAAACATCTTCGTAGAG 57.756 34.615 7.74 0.00 38.43 2.43
862 867 1.269723 GTTTTGCAGGCTCCCAGTAAC 59.730 52.381 0.00 0.00 0.00 2.50
956 2149 2.107141 GCGCTGCTATCCTCCGTT 59.893 61.111 0.00 0.00 0.00 4.44
1095 2288 1.972795 GGGGGACGTATATACTTGGCA 59.027 52.381 11.05 0.00 0.00 4.92
1110 2303 0.850883 AAGGATGGAGCAAAGGGGGA 60.851 55.000 0.00 0.00 0.00 4.81
1137 2330 4.933400 GGAAGGCAATAGTAGTTCGTGAAA 59.067 41.667 0.00 0.00 0.00 2.69
1138 2331 4.501071 GGAAGGCAATAGTAGTTCGTGAA 58.499 43.478 0.00 0.00 0.00 3.18
1139 2332 3.118884 GGGAAGGCAATAGTAGTTCGTGA 60.119 47.826 0.00 0.00 0.00 4.35
1140 2333 3.195661 GGGAAGGCAATAGTAGTTCGTG 58.804 50.000 0.00 0.00 0.00 4.35
1142 2335 3.536956 TGGGAAGGCAATAGTAGTTCG 57.463 47.619 0.00 0.00 0.00 3.95
1143 2336 5.652452 ACATTTGGGAAGGCAATAGTAGTTC 59.348 40.000 0.00 0.00 0.00 3.01
1144 2337 5.580022 ACATTTGGGAAGGCAATAGTAGTT 58.420 37.500 0.00 0.00 0.00 2.24
1145 2338 5.193099 ACATTTGGGAAGGCAATAGTAGT 57.807 39.130 0.00 0.00 0.00 2.73
1146 2339 6.263168 CCTAACATTTGGGAAGGCAATAGTAG 59.737 42.308 0.00 0.00 32.08 2.57
1147 2340 6.126409 CCTAACATTTGGGAAGGCAATAGTA 58.874 40.000 0.00 0.00 32.08 1.82
1148 2341 4.956075 CCTAACATTTGGGAAGGCAATAGT 59.044 41.667 0.00 0.00 32.08 2.12
1149 2342 5.520376 CCTAACATTTGGGAAGGCAATAG 57.480 43.478 0.00 0.00 32.08 1.73
1156 2349 5.643777 CGGATATAGCCTAACATTTGGGAAG 59.356 44.000 5.31 0.00 32.08 3.46
1174 2367 1.734655 AGGCTCCATGAACCGGATAT 58.265 50.000 9.46 0.00 0.00 1.63
1175 2368 2.158370 TCTAGGCTCCATGAACCGGATA 60.158 50.000 9.46 0.00 0.00 2.59
1176 2369 1.051812 CTAGGCTCCATGAACCGGAT 58.948 55.000 9.46 0.00 0.00 4.18
1580 2773 2.519013 AGAATGGACAAAAGGACCAGC 58.481 47.619 0.00 0.00 44.46 4.85
1677 3028 3.897325 TGCTGCCGATACGAGTTAATAG 58.103 45.455 0.00 0.00 0.00 1.73
1705 3056 7.687941 AAGCTAGAGCAAGCAACTTAATTTA 57.312 32.000 4.01 0.00 45.30 1.40
1752 3103 7.393234 AGAGCCATAATTAGCACTTTGTAACAA 59.607 33.333 0.18 0.00 0.00 2.83
1755 3106 7.109501 TGAGAGCCATAATTAGCACTTTGTAA 58.890 34.615 0.18 0.00 29.65 2.41
1757 3108 5.500234 TGAGAGCCATAATTAGCACTTTGT 58.500 37.500 0.18 0.00 29.65 2.83
1775 3127 6.198029 CAGATGCACGATAAGTAACTTGAGAG 59.802 42.308 0.00 0.00 0.00 3.20
1932 3285 1.007387 GGTCAAGGCAAAAGCACCG 60.007 57.895 0.00 0.00 0.00 4.94
1962 3327 4.401022 ACCTTGATGATGTGAGCAAAAGA 58.599 39.130 0.00 0.00 0.00 2.52
1976 3341 1.406069 CCTCCGGTCTCAACCTTGATG 60.406 57.143 0.00 0.00 44.04 3.07
2027 3392 1.202290 GCAATGGCAAATACTCCACCG 60.202 52.381 0.00 0.00 40.72 4.94
2128 3494 2.428890 ACAAGAGATGAGACTAAGGGCG 59.571 50.000 0.00 0.00 0.00 6.13
2356 3722 8.220755 TGGTACTGGAACATAATTTATTCAGC 57.779 34.615 0.00 0.00 38.20 4.26
2407 3773 8.539544 TGACTGACCTGAAGACATGATATTTAA 58.460 33.333 0.00 0.00 0.00 1.52
2555 3921 7.060059 TCGCACACAATTGTATAAATTTTGACG 59.940 33.333 11.53 5.91 33.30 4.35
2574 3941 2.029244 CGATTCTGTTACCATCGCACAC 59.971 50.000 0.00 0.00 33.94 3.82
2639 4006 1.308998 CTTTCAAACCACAGTCGCCT 58.691 50.000 0.00 0.00 0.00 5.52
2745 4112 7.121168 CACTTGGCCTATATGTTGAAGAAGAAA 59.879 37.037 3.32 0.00 0.00 2.52
2746 4113 6.599244 CACTTGGCCTATATGTTGAAGAAGAA 59.401 38.462 3.32 0.00 0.00 2.52
2747 4114 6.070251 TCACTTGGCCTATATGTTGAAGAAGA 60.070 38.462 3.32 0.00 0.00 2.87
2789 4156 7.815840 TGGACAATCAAAGTAATGTTCTTGA 57.184 32.000 0.00 0.00 0.00 3.02
2911 4279 9.607988 AATAAATGACCGACATTACAATAGTCA 57.392 29.630 7.88 0.00 46.90 3.41
2938 4306 5.633182 GCTCTATAGATCACTGCAGTAAAGC 59.367 44.000 21.20 13.65 0.00 3.51
2942 4310 3.753797 CGGCTCTATAGATCACTGCAGTA 59.246 47.826 21.20 8.74 0.00 2.74
3118 4486 4.141846 GCCTGGAGACTCATTAATGACAGA 60.142 45.833 24.17 4.93 31.39 3.41
3189 4558 3.784701 TGCACCATGTTGTTTTACGTT 57.215 38.095 0.00 0.00 0.00 3.99
3261 4631 4.340381 ACTGAATGTTTTCTTGCAAGCTCT 59.660 37.500 21.99 1.43 32.78 4.09
3580 4950 1.883084 GTCCATCTTACCGCCTGCG 60.883 63.158 4.20 4.20 39.44 5.18
3625 4995 3.184382 TCTGGGATCACCACTGTCTTA 57.816 47.619 0.00 0.00 46.80 2.10
3724 5094 2.006888 CACTACCCTGCAAATACCACG 58.993 52.381 0.00 0.00 0.00 4.94
3728 5098 3.629142 ACTCCACTACCCTGCAAATAC 57.371 47.619 0.00 0.00 0.00 1.89
3858 5228 6.773976 ATAGTACAACATGACCAAAATGGG 57.226 37.500 0.00 0.00 43.37 4.00
3899 5269 7.946655 TCACAACTACTACATTTCACTTCAG 57.053 36.000 0.00 0.00 0.00 3.02
3914 5284 3.063452 CACGCATGGGTATTCACAACTAC 59.937 47.826 15.82 0.00 0.00 2.73
3915 5285 3.266636 CACGCATGGGTATTCACAACTA 58.733 45.455 15.82 0.00 0.00 2.24
3916 5286 2.083774 CACGCATGGGTATTCACAACT 58.916 47.619 15.82 0.00 0.00 3.16
3917 5287 1.810151 ACACGCATGGGTATTCACAAC 59.190 47.619 15.82 0.00 0.00 3.32
3989 5359 5.878406 AATCCACTCCTGAATAAGTCGAT 57.122 39.130 0.00 0.00 0.00 3.59
4000 5370 2.421424 GCTGCTTGTTAATCCACTCCTG 59.579 50.000 0.00 0.00 0.00 3.86
4001 5371 2.307098 AGCTGCTTGTTAATCCACTCCT 59.693 45.455 0.00 0.00 0.00 3.69
4002 5372 2.680339 GAGCTGCTTGTTAATCCACTCC 59.320 50.000 2.53 0.00 0.00 3.85
4004 5374 3.341823 CTGAGCTGCTTGTTAATCCACT 58.658 45.455 2.53 0.00 0.00 4.00
4052 5423 6.817765 AAAAATGAGCTTAACGATCCAAGA 57.182 33.333 0.00 0.00 0.00 3.02
4055 5426 9.997482 GTTAATAAAAATGAGCTTAACGATCCA 57.003 29.630 0.00 0.00 0.00 3.41
4063 5434 9.656040 TCTGTACCGTTAATAAAAATGAGCTTA 57.344 29.630 0.00 0.00 0.00 3.09
4075 5446 9.926158 TCAATGTTAGTTTCTGTACCGTTAATA 57.074 29.630 0.00 0.00 0.00 0.98
4085 5456 4.081322 ACCGGTCAATGTTAGTTTCTGT 57.919 40.909 0.00 0.00 0.00 3.41
4091 5462 6.713450 ACTTTAATGAACCGGTCAATGTTAGT 59.287 34.615 8.04 4.70 40.50 2.24
4119 5490 0.108138 AGTCACCCTAATGTGCTCGC 60.108 55.000 0.00 0.00 36.17 5.03
4127 5498 2.683742 CGCCAATTGGAGTCACCCTAAT 60.684 50.000 29.02 0.00 37.39 1.73
4134 5505 0.605319 GTGGTCGCCAATTGGAGTCA 60.605 55.000 29.02 21.97 34.18 3.41
4135 5506 0.605319 TGTGGTCGCCAATTGGAGTC 60.605 55.000 29.02 21.43 34.18 3.36
4152 5523 1.885163 GACTGGGTCGGACCGAATGT 61.885 60.000 20.26 14.37 39.83 2.71
4154 5525 2.356780 GGACTGGGTCGGACCGAAT 61.357 63.158 20.26 7.00 39.83 3.34
4163 5534 0.666577 CGACTCAAACGGACTGGGTC 60.667 60.000 4.15 4.15 40.33 4.46
4165 5536 0.032952 TTCGACTCAAACGGACTGGG 59.967 55.000 0.00 0.00 0.00 4.45
4188 5560 2.051518 TTGGGCCATGGATTGCGTC 61.052 57.895 18.40 0.00 0.00 5.19
4240 5631 1.135228 GCAATTCCGGCCGTAATTTGT 60.135 47.619 24.24 3.06 0.00 2.83
4241 5632 1.555477 GCAATTCCGGCCGTAATTTG 58.445 50.000 24.24 21.62 0.00 2.32
4253 5644 2.038269 TTCGTCTGGGCGCAATTCC 61.038 57.895 10.83 0.47 0.00 3.01
4256 5647 2.031919 TGTTCGTCTGGGCGCAAT 59.968 55.556 10.83 0.00 0.00 3.56
4267 5658 0.603707 CACATCTGCCCAGTGTTCGT 60.604 55.000 0.00 0.00 0.00 3.85
4278 5669 0.901124 AGACAGGGAGACACATCTGC 59.099 55.000 0.00 0.00 42.41 4.26
4280 5671 2.175202 GACAGACAGGGAGACACATCT 58.825 52.381 0.00 0.00 38.15 2.90
4283 5674 0.832135 GGGACAGACAGGGAGACACA 60.832 60.000 0.00 0.00 0.00 3.72
4285 5676 1.546738 TGGGACAGACAGGGAGACA 59.453 57.895 0.00 0.00 0.00 3.41
4299 5690 1.283613 ACGGCTTCCACATTAATGGGA 59.716 47.619 19.55 18.06 40.49 4.37
4303 5694 2.365582 GTCCACGGCTTCCACATTAAT 58.634 47.619 0.00 0.00 0.00 1.40
4304 5695 1.612199 GGTCCACGGCTTCCACATTAA 60.612 52.381 0.00 0.00 0.00 1.40
4305 5696 0.035820 GGTCCACGGCTTCCACATTA 60.036 55.000 0.00 0.00 0.00 1.90
4306 5697 1.303317 GGTCCACGGCTTCCACATT 60.303 57.895 0.00 0.00 0.00 2.71
4307 5698 2.351276 GGTCCACGGCTTCCACAT 59.649 61.111 0.00 0.00 0.00 3.21
4308 5699 3.164977 TGGTCCACGGCTTCCACA 61.165 61.111 0.00 0.00 0.00 4.17
4309 5700 2.358737 CTGGTCCACGGCTTCCAC 60.359 66.667 0.00 0.00 0.00 4.02
4310 5701 2.847234 ACTGGTCCACGGCTTCCA 60.847 61.111 0.00 0.00 0.00 3.53
4311 5702 2.047179 GACTGGTCCACGGCTTCC 60.047 66.667 0.00 0.00 0.00 3.46
4321 5712 1.235281 GCGGTGGAAAAGGACTGGTC 61.235 60.000 0.00 0.00 0.00 4.02
4322 5713 1.228154 GCGGTGGAAAAGGACTGGT 60.228 57.895 0.00 0.00 0.00 4.00
4323 5714 1.971695 GGCGGTGGAAAAGGACTGG 60.972 63.158 0.00 0.00 0.00 4.00
4324 5715 2.325082 CGGCGGTGGAAAAGGACTG 61.325 63.158 0.00 0.00 0.00 3.51
4325 5716 2.032071 CGGCGGTGGAAAAGGACT 59.968 61.111 0.00 0.00 0.00 3.85
4326 5717 3.733960 GCGGCGGTGGAAAAGGAC 61.734 66.667 9.78 0.00 0.00 3.85
4329 5720 3.431725 GAGGCGGCGGTGGAAAAG 61.432 66.667 9.78 0.00 0.00 2.27
4343 5734 1.216710 GTGTCGAGGCTCAAGGAGG 59.783 63.158 15.95 0.00 0.00 4.30
4344 5735 1.153939 CGTGTCGAGGCTCAAGGAG 60.154 63.158 15.95 0.00 0.00 3.69
4345 5736 2.962569 CGTGTCGAGGCTCAAGGA 59.037 61.111 15.95 0.44 0.00 3.36
4346 5737 2.811317 GCGTGTCGAGGCTCAAGG 60.811 66.667 15.95 6.27 0.00 3.61
4347 5738 0.179137 TATGCGTGTCGAGGCTCAAG 60.179 55.000 15.95 0.00 33.93 3.02
4348 5739 0.457853 GTATGCGTGTCGAGGCTCAA 60.458 55.000 15.95 0.00 33.93 3.02
4349 5740 1.138883 GTATGCGTGTCGAGGCTCA 59.861 57.895 15.95 0.00 33.93 4.26
4350 5741 1.589196 GGTATGCGTGTCGAGGCTC 60.589 63.158 3.87 3.87 33.93 4.70
4351 5742 2.494918 GGTATGCGTGTCGAGGCT 59.505 61.111 0.00 0.00 33.93 4.58
4352 5743 1.731433 TAGGGTATGCGTGTCGAGGC 61.731 60.000 0.00 0.00 0.00 4.70
4353 5744 0.311165 CTAGGGTATGCGTGTCGAGG 59.689 60.000 0.00 0.00 0.00 4.63
4354 5745 0.317938 GCTAGGGTATGCGTGTCGAG 60.318 60.000 0.00 0.00 0.00 4.04
4355 5746 0.750546 AGCTAGGGTATGCGTGTCGA 60.751 55.000 0.00 0.00 0.00 4.20
4356 5747 0.317938 GAGCTAGGGTATGCGTGTCG 60.318 60.000 0.00 0.00 0.00 4.35
4357 5748 0.032267 GGAGCTAGGGTATGCGTGTC 59.968 60.000 0.00 0.00 0.00 3.67
4358 5749 0.686441 TGGAGCTAGGGTATGCGTGT 60.686 55.000 0.00 0.00 0.00 4.49
4359 5750 0.032678 CTGGAGCTAGGGTATGCGTG 59.967 60.000 0.00 0.00 0.00 5.34
4360 5751 0.397254 ACTGGAGCTAGGGTATGCGT 60.397 55.000 0.00 0.00 0.00 5.24
4361 5752 0.315568 GACTGGAGCTAGGGTATGCG 59.684 60.000 0.00 0.00 0.00 4.73
4362 5753 0.315568 CGACTGGAGCTAGGGTATGC 59.684 60.000 0.00 0.00 0.00 3.14
4363 5754 0.315568 GCGACTGGAGCTAGGGTATG 59.684 60.000 0.00 0.00 0.00 2.39
4364 5755 0.828343 GGCGACTGGAGCTAGGGTAT 60.828 60.000 0.00 0.00 34.52 2.73
4365 5756 1.455217 GGCGACTGGAGCTAGGGTA 60.455 63.158 0.00 0.00 34.52 3.69
4366 5757 2.760385 GGCGACTGGAGCTAGGGT 60.760 66.667 0.00 0.00 34.52 4.34
4367 5758 2.443016 AGGCGACTGGAGCTAGGG 60.443 66.667 0.00 0.00 41.13 3.53
4368 5759 1.452145 GAGAGGCGACTGGAGCTAGG 61.452 65.000 0.00 0.00 44.43 3.02
4369 5760 1.452145 GGAGAGGCGACTGGAGCTAG 61.452 65.000 0.00 0.00 44.43 3.42
4370 5761 1.454111 GGAGAGGCGACTGGAGCTA 60.454 63.158 0.00 0.00 44.43 3.32
4371 5762 2.757917 GGAGAGGCGACTGGAGCT 60.758 66.667 0.00 0.00 44.43 4.09
4372 5763 4.200283 CGGAGAGGCGACTGGAGC 62.200 72.222 0.00 0.00 44.43 4.70
4373 5764 2.752238 ACGGAGAGGCGACTGGAG 60.752 66.667 0.00 0.00 44.43 3.86
4374 5765 2.750637 GACGGAGAGGCGACTGGA 60.751 66.667 0.00 0.00 44.43 3.86
4375 5766 3.827898 GGACGGAGAGGCGACTGG 61.828 72.222 0.00 0.00 44.43 4.00
4376 5767 2.752238 AGGACGGAGAGGCGACTG 60.752 66.667 0.00 0.00 44.43 3.51
4378 5769 2.750637 TGAGGACGGAGAGGCGAC 60.751 66.667 0.00 0.00 0.00 5.19
4379 5770 2.750637 GTGAGGACGGAGAGGCGA 60.751 66.667 0.00 0.00 0.00 5.54
4380 5771 2.752238 AGTGAGGACGGAGAGGCG 60.752 66.667 0.00 0.00 0.00 5.52
4381 5772 2.419739 GGAGTGAGGACGGAGAGGC 61.420 68.421 0.00 0.00 0.00 4.70
4382 5773 1.755008 GGGAGTGAGGACGGAGAGG 60.755 68.421 0.00 0.00 0.00 3.69
4383 5774 0.750182 GAGGGAGTGAGGACGGAGAG 60.750 65.000 0.00 0.00 0.00 3.20
4384 5775 1.303615 GAGGGAGTGAGGACGGAGA 59.696 63.158 0.00 0.00 0.00 3.71
4385 5776 1.755008 GGAGGGAGTGAGGACGGAG 60.755 68.421 0.00 0.00 0.00 4.63
4386 5777 2.359404 GGAGGGAGTGAGGACGGA 59.641 66.667 0.00 0.00 0.00 4.69
4387 5778 3.141488 CGGAGGGAGTGAGGACGG 61.141 72.222 0.00 0.00 0.00 4.79
4414 5805 1.340017 ACTTCCACATTCCCATGACGG 60.340 52.381 0.00 0.00 34.11 4.79
4415 5806 1.739466 CACTTCCACATTCCCATGACG 59.261 52.381 0.00 0.00 34.11 4.35
4416 5807 3.071874 TCACTTCCACATTCCCATGAC 57.928 47.619 0.00 0.00 34.11 3.06
4417 5808 3.805066 TTCACTTCCACATTCCCATGA 57.195 42.857 0.00 0.00 34.11 3.07
4418 5809 3.382546 GGATTCACTTCCACATTCCCATG 59.617 47.826 0.00 0.00 35.72 3.66
4419 5810 3.628257 GGGATTCACTTCCACATTCCCAT 60.628 47.826 0.00 0.00 40.87 4.00
4420 5811 2.291540 GGGATTCACTTCCACATTCCCA 60.292 50.000 0.00 0.00 40.87 4.37
4421 5812 2.379005 GGGATTCACTTCCACATTCCC 58.621 52.381 0.00 0.00 37.53 3.97
4422 5813 2.379005 GGGGATTCACTTCCACATTCC 58.621 52.381 0.00 0.00 39.16 3.01
4423 5814 2.017049 CGGGGATTCACTTCCACATTC 58.983 52.381 0.00 0.00 39.32 2.67
4424 5815 1.340991 CCGGGGATTCACTTCCACATT 60.341 52.381 0.00 0.00 39.32 2.71
4425 5816 0.255890 CCGGGGATTCACTTCCACAT 59.744 55.000 0.00 0.00 39.32 3.21
4426 5817 1.682849 CCGGGGATTCACTTCCACA 59.317 57.895 0.00 0.00 39.32 4.17
4427 5818 1.749258 GCCGGGGATTCACTTCCAC 60.749 63.158 2.18 0.00 37.53 4.02
4428 5819 2.674754 GCCGGGGATTCACTTCCA 59.325 61.111 2.18 0.00 37.53 3.53
4429 5820 2.513897 CGCCGGGGATTCACTTCC 60.514 66.667 14.46 0.00 34.83 3.46
4430 5821 1.521681 CTCGCCGGGGATTCACTTC 60.522 63.158 22.85 0.00 0.00 3.01
4431 5822 1.550130 TTCTCGCCGGGGATTCACTT 61.550 55.000 22.85 0.00 0.00 3.16
4432 5823 1.961180 CTTCTCGCCGGGGATTCACT 61.961 60.000 22.85 0.00 0.00 3.41
4433 5824 1.521681 CTTCTCGCCGGGGATTCAC 60.522 63.158 22.85 0.00 0.00 3.18
4434 5825 2.731571 CCTTCTCGCCGGGGATTCA 61.732 63.158 22.85 6.26 0.00 2.57
4435 5826 2.109181 CCTTCTCGCCGGGGATTC 59.891 66.667 22.85 0.00 0.00 2.52
4436 5827 3.480133 CCCTTCTCGCCGGGGATT 61.480 66.667 22.85 0.00 42.58 3.01
4440 5831 4.162690 CTTCCCCTTCTCGCCGGG 62.163 72.222 2.18 0.00 40.29 5.73
4441 5832 4.840005 GCTTCCCCTTCTCGCCGG 62.840 72.222 0.00 0.00 0.00 6.13
4442 5833 4.082523 TGCTTCCCCTTCTCGCCG 62.083 66.667 0.00 0.00 0.00 6.46
4443 5834 2.436824 GTGCTTCCCCTTCTCGCC 60.437 66.667 0.00 0.00 0.00 5.54
4444 5835 2.815647 CGTGCTTCCCCTTCTCGC 60.816 66.667 0.00 0.00 0.00 5.03
4445 5836 1.446272 GTCGTGCTTCCCCTTCTCG 60.446 63.158 0.00 0.00 0.00 4.04
4446 5837 1.079057 GGTCGTGCTTCCCCTTCTC 60.079 63.158 0.00 0.00 0.00 2.87
4447 5838 1.841556 TGGTCGTGCTTCCCCTTCT 60.842 57.895 0.00 0.00 0.00 2.85
4448 5839 1.671379 GTGGTCGTGCTTCCCCTTC 60.671 63.158 0.00 0.00 0.00 3.46
4449 5840 2.430367 GTGGTCGTGCTTCCCCTT 59.570 61.111 0.00 0.00 0.00 3.95
4450 5841 4.003788 CGTGGTCGTGCTTCCCCT 62.004 66.667 0.00 0.00 0.00 4.79
4451 5842 3.934391 CTCGTGGTCGTGCTTCCCC 62.934 68.421 0.00 0.00 38.33 4.81
4452 5843 2.432628 CTCGTGGTCGTGCTTCCC 60.433 66.667 0.00 0.00 38.33 3.97
4453 5844 2.432628 CCTCGTGGTCGTGCTTCC 60.433 66.667 0.00 0.00 38.33 3.46
4454 5845 3.112709 GCCTCGTGGTCGTGCTTC 61.113 66.667 5.26 0.00 38.33 3.86
4455 5846 4.681978 GGCCTCGTGGTCGTGCTT 62.682 66.667 5.26 0.00 36.65 3.91
4461 5852 4.754667 GGAACCGGCCTCGTGGTC 62.755 72.222 0.00 0.90 37.54 4.02
4463 5854 4.452733 GAGGAACCGGCCTCGTGG 62.453 72.222 11.82 0.00 44.52 4.94
4472 5863 4.078516 GACGTGGGGGAGGAACCG 62.079 72.222 0.00 0.00 40.11 4.44
4473 5864 4.078516 CGACGTGGGGGAGGAACC 62.079 72.222 0.00 0.00 38.08 3.62
4474 5865 3.292500 GACGACGTGGGGGAGGAAC 62.293 68.421 4.58 0.00 0.00 3.62
4475 5866 2.993264 GACGACGTGGGGGAGGAA 60.993 66.667 4.58 0.00 0.00 3.36
4476 5867 3.975591 AGACGACGTGGGGGAGGA 61.976 66.667 4.58 0.00 0.00 3.71
4477 5868 3.760035 CAGACGACGTGGGGGAGG 61.760 72.222 4.58 0.00 0.00 4.30
4478 5869 3.760035 CCAGACGACGTGGGGGAG 61.760 72.222 4.58 0.00 0.00 4.30
4483 5874 4.778415 CGCTCCCAGACGACGTGG 62.778 72.222 4.58 0.39 34.52 4.94
4496 5887 4.828925 GTGGAGAGGGCAGCGCTC 62.829 72.222 27.96 27.96 42.60 5.03
4499 5890 4.154347 GAGGTGGAGAGGGCAGCG 62.154 72.222 0.00 0.00 0.00 5.18
4500 5891 4.154347 CGAGGTGGAGAGGGCAGC 62.154 72.222 0.00 0.00 0.00 5.25
4501 5892 2.286523 AACGAGGTGGAGAGGGCAG 61.287 63.158 0.00 0.00 0.00 4.85
4502 5893 2.203788 AACGAGGTGGAGAGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
4503 5894 2.266055 CAACGAGGTGGAGAGGGC 59.734 66.667 0.00 0.00 0.00 5.19
4504 5895 2.266055 GCAACGAGGTGGAGAGGG 59.734 66.667 0.00 0.00 0.00 4.30
4505 5896 2.266055 GGCAACGAGGTGGAGAGG 59.734 66.667 0.00 0.00 0.00 3.69
4506 5897 2.266055 GGGCAACGAGGTGGAGAG 59.734 66.667 0.00 0.00 37.60 3.20
4507 5898 2.525629 TGGGCAACGAGGTGGAGA 60.526 61.111 0.00 0.00 37.60 3.71
4508 5899 2.358737 GTGGGCAACGAGGTGGAG 60.359 66.667 0.00 0.00 37.60 3.86
4509 5900 3.948719 GGTGGGCAACGAGGTGGA 61.949 66.667 0.00 0.00 37.60 4.02
4510 5901 3.491598 AAGGTGGGCAACGAGGTGG 62.492 63.158 0.00 0.00 37.60 4.61
4511 5902 1.966451 GAAGGTGGGCAACGAGGTG 60.966 63.158 0.00 0.00 37.60 4.00
4512 5903 2.113243 GAGAAGGTGGGCAACGAGGT 62.113 60.000 0.00 0.00 37.60 3.85
4513 5904 1.376037 GAGAAGGTGGGCAACGAGG 60.376 63.158 0.00 0.00 37.60 4.63
4514 5905 1.376037 GGAGAAGGTGGGCAACGAG 60.376 63.158 0.00 0.00 37.60 4.18
4515 5906 2.747686 GGAGAAGGTGGGCAACGA 59.252 61.111 0.00 0.00 37.60 3.85
4516 5907 2.742372 CGGAGAAGGTGGGCAACG 60.742 66.667 0.00 0.00 37.60 4.10
4517 5908 1.671379 GACGGAGAAGGTGGGCAAC 60.671 63.158 0.00 0.00 0.00 4.17
4518 5909 1.827399 GAGACGGAGAAGGTGGGCAA 61.827 60.000 0.00 0.00 0.00 4.52
4519 5910 2.203788 AGACGGAGAAGGTGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
4520 5911 2.579738 GAGACGGAGAAGGTGGGC 59.420 66.667 0.00 0.00 0.00 5.36
4521 5912 2.359967 GGGAGACGGAGAAGGTGGG 61.360 68.421 0.00 0.00 0.00 4.61
4522 5913 2.359967 GGGGAGACGGAGAAGGTGG 61.360 68.421 0.00 0.00 0.00 4.61
4523 5914 2.711922 CGGGGAGACGGAGAAGGTG 61.712 68.421 0.00 0.00 0.00 4.00
4524 5915 2.362632 CGGGGAGACGGAGAAGGT 60.363 66.667 0.00 0.00 0.00 3.50
4525 5916 3.839432 GCGGGGAGACGGAGAAGG 61.839 72.222 0.00 0.00 0.00 3.46
4526 5917 3.839432 GGCGGGGAGACGGAGAAG 61.839 72.222 0.00 0.00 0.00 2.85
4544 5935 2.347490 ACACACGGTGAGGCCATC 59.653 61.111 16.29 0.00 36.96 3.51
4555 5946 3.455195 CGTACGACCGCACACACG 61.455 66.667 10.44 0.00 0.00 4.49
4556 5947 2.353839 ACGTACGACCGCACACAC 60.354 61.111 24.41 0.00 0.00 3.82
4557 5948 2.051076 GACGTACGACCGCACACA 60.051 61.111 24.41 0.00 0.00 3.72
4558 5949 1.602877 CTTGACGTACGACCGCACAC 61.603 60.000 24.41 3.35 0.00 3.82
4559 5950 1.370778 CTTGACGTACGACCGCACA 60.371 57.895 24.41 8.80 0.00 4.57
4560 5951 2.084681 CCTTGACGTACGACCGCAC 61.085 63.158 24.41 6.36 0.00 5.34
4561 5952 2.256158 CCTTGACGTACGACCGCA 59.744 61.111 24.41 11.19 0.00 5.69
4562 5953 3.177249 GCCTTGACGTACGACCGC 61.177 66.667 24.41 13.37 0.00 5.68
4563 5954 2.872925 CGCCTTGACGTACGACCG 60.873 66.667 24.41 10.82 0.00 4.79
4564 5955 2.505557 CCGCCTTGACGTACGACC 60.506 66.667 24.41 13.50 0.00 4.79
4565 5956 1.513586 CTCCGCCTTGACGTACGAC 60.514 63.158 24.41 17.22 0.00 4.34
4566 5957 1.028330 ATCTCCGCCTTGACGTACGA 61.028 55.000 24.41 0.00 0.00 3.43
4567 5958 0.591741 GATCTCCGCCTTGACGTACG 60.592 60.000 15.01 15.01 0.00 3.67
4568 5959 0.739561 AGATCTCCGCCTTGACGTAC 59.260 55.000 0.00 0.00 0.00 3.67
4569 5960 0.738975 CAGATCTCCGCCTTGACGTA 59.261 55.000 0.00 0.00 0.00 3.57
4570 5961 1.513158 CAGATCTCCGCCTTGACGT 59.487 57.895 0.00 0.00 0.00 4.34
4571 5962 1.880340 GCAGATCTCCGCCTTGACG 60.880 63.158 0.00 0.00 0.00 4.35
4572 5963 1.522580 GGCAGATCTCCGCCTTGAC 60.523 63.158 15.24 0.00 45.29 3.18
4573 5964 2.903357 GGCAGATCTCCGCCTTGA 59.097 61.111 15.24 0.00 45.29 3.02
4579 5970 2.849964 TAGCGCTGGCAGATCTCCG 61.850 63.158 22.90 12.91 43.41 4.63
4580 5971 1.300542 GTAGCGCTGGCAGATCTCC 60.301 63.158 22.90 0.75 43.41 3.71
4581 5972 1.300542 GGTAGCGCTGGCAGATCTC 60.301 63.158 22.90 3.12 43.41 2.75
4582 5973 2.818132 GGTAGCGCTGGCAGATCT 59.182 61.111 22.90 15.75 43.41 2.75
4583 5974 2.659897 CGGTAGCGCTGGCAGATC 60.660 66.667 22.90 8.56 43.41 2.75
4584 5975 4.227134 CCGGTAGCGCTGGCAGAT 62.227 66.667 22.90 5.57 43.41 2.90
4616 6007 2.279918 ACGTCACTCCACGGCAAC 60.280 61.111 0.00 0.00 44.41 4.17
4617 6008 2.279851 CACGTCACTCCACGGCAA 60.280 61.111 0.00 0.00 44.41 4.52
4618 6009 4.961511 GCACGTCACTCCACGGCA 62.962 66.667 0.00 0.00 44.41 5.69
4619 6010 4.961511 TGCACGTCACTCCACGGC 62.962 66.667 0.00 0.00 44.41 5.68
4620 6011 2.048222 ATGCACGTCACTCCACGG 60.048 61.111 0.00 0.00 44.41 4.94
4621 6012 1.073216 GAGATGCACGTCACTCCACG 61.073 60.000 0.00 0.00 45.65 4.94
4622 6013 0.737715 GGAGATGCACGTCACTCCAC 60.738 60.000 16.68 0.54 45.53 4.02
4623 6014 1.591703 GGAGATGCACGTCACTCCA 59.408 57.895 16.68 0.00 45.53 3.86
4624 6015 1.153549 GGGAGATGCACGTCACTCC 60.154 63.158 14.52 14.52 45.50 3.85
4625 6016 1.153549 GGGGAGATGCACGTCACTC 60.154 63.158 0.00 0.00 0.00 3.51
4626 6017 1.480212 TTGGGGAGATGCACGTCACT 61.480 55.000 0.00 0.00 0.00 3.41
4627 6018 0.605319 TTTGGGGAGATGCACGTCAC 60.605 55.000 0.00 0.00 0.00 3.67
4628 6019 0.109532 TTTTGGGGAGATGCACGTCA 59.890 50.000 0.00 0.00 0.00 4.35
4629 6020 1.068541 GTTTTTGGGGAGATGCACGTC 60.069 52.381 0.00 0.00 0.00 4.34
4630 6021 0.958822 GTTTTTGGGGAGATGCACGT 59.041 50.000 0.00 0.00 0.00 4.49
4631 6022 1.247567 AGTTTTTGGGGAGATGCACG 58.752 50.000 0.00 0.00 0.00 5.34
4632 6023 3.572255 TGTTAGTTTTTGGGGAGATGCAC 59.428 43.478 0.00 0.00 0.00 4.57
4633 6024 3.572255 GTGTTAGTTTTTGGGGAGATGCA 59.428 43.478 0.00 0.00 0.00 3.96
4634 6025 3.056821 GGTGTTAGTTTTTGGGGAGATGC 60.057 47.826 0.00 0.00 0.00 3.91
4635 6026 4.407365 AGGTGTTAGTTTTTGGGGAGATG 58.593 43.478 0.00 0.00 0.00 2.90
4636 6027 4.663334 GAGGTGTTAGTTTTTGGGGAGAT 58.337 43.478 0.00 0.00 0.00 2.75
4637 6028 3.495453 CGAGGTGTTAGTTTTTGGGGAGA 60.495 47.826 0.00 0.00 0.00 3.71
4638 6029 2.812011 CGAGGTGTTAGTTTTTGGGGAG 59.188 50.000 0.00 0.00 0.00 4.30
4639 6030 2.487625 CCGAGGTGTTAGTTTTTGGGGA 60.488 50.000 0.00 0.00 0.00 4.81
4640 6031 1.883926 CCGAGGTGTTAGTTTTTGGGG 59.116 52.381 0.00 0.00 0.00 4.96
4641 6032 1.268625 GCCGAGGTGTTAGTTTTTGGG 59.731 52.381 0.00 0.00 0.00 4.12
4642 6033 1.268625 GGCCGAGGTGTTAGTTTTTGG 59.731 52.381 0.00 0.00 0.00 3.28
4643 6034 1.268625 GGGCCGAGGTGTTAGTTTTTG 59.731 52.381 0.00 0.00 0.00 2.44
4644 6035 1.133730 TGGGCCGAGGTGTTAGTTTTT 60.134 47.619 0.00 0.00 0.00 1.94
4645 6036 0.475044 TGGGCCGAGGTGTTAGTTTT 59.525 50.000 0.00 0.00 0.00 2.43
4646 6037 0.036306 CTGGGCCGAGGTGTTAGTTT 59.964 55.000 6.92 0.00 0.00 2.66
4647 6038 0.834687 TCTGGGCCGAGGTGTTAGTT 60.835 55.000 15.52 0.00 0.00 2.24
4648 6039 0.617820 ATCTGGGCCGAGGTGTTAGT 60.618 55.000 15.52 0.00 0.00 2.24
4649 6040 0.105039 GATCTGGGCCGAGGTGTTAG 59.895 60.000 15.52 0.00 0.00 2.34
4650 6041 1.672854 CGATCTGGGCCGAGGTGTTA 61.673 60.000 15.52 0.00 0.00 2.41
4651 6042 2.990479 GATCTGGGCCGAGGTGTT 59.010 61.111 15.52 0.00 0.00 3.32
4652 6043 3.461773 CGATCTGGGCCGAGGTGT 61.462 66.667 15.52 1.35 0.00 4.16
4653 6044 4.227134 CCGATCTGGGCCGAGGTG 62.227 72.222 15.52 4.98 0.00 4.00
4695 6086 3.687321 TTGATCTCCAGCAGGCGGC 62.687 63.158 0.00 0.00 45.30 6.53
4696 6087 1.817099 GTTGATCTCCAGCAGGCGG 60.817 63.158 0.00 0.00 33.74 6.13
4697 6088 1.817099 GGTTGATCTCCAGCAGGCG 60.817 63.158 0.00 0.00 33.74 5.52
4698 6089 1.817099 CGGTTGATCTCCAGCAGGC 60.817 63.158 0.00 0.00 33.74 4.85
4699 6090 1.817099 GCGGTTGATCTCCAGCAGG 60.817 63.158 13.93 0.00 0.00 4.85
4700 6091 1.817099 GGCGGTTGATCTCCAGCAG 60.817 63.158 17.46 0.00 0.00 4.24
4701 6092 2.268920 GGCGGTTGATCTCCAGCA 59.731 61.111 17.46 0.00 0.00 4.41
4702 6093 2.892425 CGGCGGTTGATCTCCAGC 60.892 66.667 0.00 5.30 0.00 4.85
4703 6094 1.519455 GACGGCGGTTGATCTCCAG 60.519 63.158 13.24 0.00 0.00 3.86
4704 6095 2.577059 GACGGCGGTTGATCTCCA 59.423 61.111 13.24 0.00 0.00 3.86
4705 6096 2.582498 CGACGGCGGTTGATCTCC 60.582 66.667 13.24 0.00 0.00 3.71
4706 6097 2.158959 CACGACGGCGGTTGATCTC 61.159 63.158 18.49 0.00 43.17 2.75
4707 6098 2.126071 CACGACGGCGGTTGATCT 60.126 61.111 18.49 0.00 43.17 2.75
4708 6099 3.849953 GCACGACGGCGGTTGATC 61.850 66.667 18.49 0.00 43.17 2.92
4722 6113 4.785453 CAGGAGGAAGGCGGGCAC 62.785 72.222 3.78 0.00 0.00 5.01
4724 6115 4.475135 GTCAGGAGGAAGGCGGGC 62.475 72.222 0.00 0.00 0.00 6.13
4725 6116 3.787001 GGTCAGGAGGAAGGCGGG 61.787 72.222 0.00 0.00 0.00 6.13
4726 6117 2.685380 AGGTCAGGAGGAAGGCGG 60.685 66.667 0.00 0.00 0.00 6.13
4727 6118 2.896443 GAGGTCAGGAGGAAGGCG 59.104 66.667 0.00 0.00 0.00 5.52
4728 6119 1.950973 GACGAGGTCAGGAGGAAGGC 61.951 65.000 0.00 0.00 32.09 4.35
4729 6120 0.612174 TGACGAGGTCAGGAGGAAGG 60.612 60.000 0.00 0.00 37.67 3.46
4730 6121 2.962882 TGACGAGGTCAGGAGGAAG 58.037 57.895 0.00 0.00 37.67 3.46
4738 6129 1.112916 TCAAGTGGCTGACGAGGTCA 61.113 55.000 0.00 0.00 40.50 4.02
4739 6130 0.389166 CTCAAGTGGCTGACGAGGTC 60.389 60.000 0.00 0.00 0.00 3.85
4740 6131 0.827925 TCTCAAGTGGCTGACGAGGT 60.828 55.000 0.00 0.00 0.00 3.85
4741 6132 0.534412 ATCTCAAGTGGCTGACGAGG 59.466 55.000 0.00 0.00 0.00 4.63
4742 6133 2.480416 GGTATCTCAAGTGGCTGACGAG 60.480 54.545 0.00 0.00 0.00 4.18
4743 6134 1.476891 GGTATCTCAAGTGGCTGACGA 59.523 52.381 0.00 0.00 0.00 4.20
4744 6135 1.471676 GGGTATCTCAAGTGGCTGACG 60.472 57.143 0.00 0.00 0.00 4.35
4745 6136 1.471676 CGGGTATCTCAAGTGGCTGAC 60.472 57.143 0.00 0.00 0.00 3.51
4746 6137 0.824109 CGGGTATCTCAAGTGGCTGA 59.176 55.000 0.00 0.00 0.00 4.26
4747 6138 0.537188 ACGGGTATCTCAAGTGGCTG 59.463 55.000 0.00 0.00 0.00 4.85
4748 6139 0.824759 GACGGGTATCTCAAGTGGCT 59.175 55.000 0.00 0.00 0.00 4.75
4749 6140 0.527817 CGACGGGTATCTCAAGTGGC 60.528 60.000 0.00 0.00 0.00 5.01
4750 6141 1.100510 TCGACGGGTATCTCAAGTGG 58.899 55.000 0.00 0.00 0.00 4.00
4751 6142 2.933495 TTCGACGGGTATCTCAAGTG 57.067 50.000 0.00 0.00 0.00 3.16
4752 6143 2.361438 GGATTCGACGGGTATCTCAAGT 59.639 50.000 0.00 0.00 0.00 3.16
4753 6144 2.288273 GGGATTCGACGGGTATCTCAAG 60.288 54.545 0.00 0.00 0.00 3.02
4754 6145 1.684983 GGGATTCGACGGGTATCTCAA 59.315 52.381 0.00 0.00 0.00 3.02
4755 6146 1.325355 GGGATTCGACGGGTATCTCA 58.675 55.000 0.00 0.00 0.00 3.27
4756 6147 0.602060 GGGGATTCGACGGGTATCTC 59.398 60.000 0.00 0.00 0.00 2.75
4757 6148 0.830866 GGGGGATTCGACGGGTATCT 60.831 60.000 0.00 0.00 0.00 1.98
4758 6149 1.117142 TGGGGGATTCGACGGGTATC 61.117 60.000 0.00 0.00 0.00 2.24
4759 6150 0.473117 ATGGGGGATTCGACGGGTAT 60.473 55.000 0.00 0.00 0.00 2.73
4760 6151 1.075076 ATGGGGGATTCGACGGGTA 60.075 57.895 0.00 0.00 0.00 3.69
4761 6152 2.366435 ATGGGGGATTCGACGGGT 60.366 61.111 0.00 0.00 0.00 5.28
4762 6153 2.111043 CATGGGGGATTCGACGGG 59.889 66.667 0.00 0.00 0.00 5.28
4763 6154 1.523711 CACATGGGGGATTCGACGG 60.524 63.158 0.00 0.00 0.00 4.79
4764 6155 1.523711 CCACATGGGGGATTCGACG 60.524 63.158 5.91 0.00 0.00 5.12
4765 6156 4.559502 CCACATGGGGGATTCGAC 57.440 61.111 5.91 0.00 0.00 4.20
4775 6166 1.228124 AACCACACGTCCCACATGG 60.228 57.895 0.00 0.00 36.46 3.66
4776 6167 1.234615 GGAACCACACGTCCCACATG 61.235 60.000 0.00 0.00 0.00 3.21
4777 6168 1.072505 GGAACCACACGTCCCACAT 59.927 57.895 0.00 0.00 0.00 3.21
4778 6169 2.318519 CTGGAACCACACGTCCCACA 62.319 60.000 0.00 0.00 0.00 4.17
4779 6170 1.597027 CTGGAACCACACGTCCCAC 60.597 63.158 0.00 0.00 0.00 4.61
4780 6171 1.338890 TTCTGGAACCACACGTCCCA 61.339 55.000 0.00 0.00 0.00 4.37
4781 6172 0.883370 GTTCTGGAACCACACGTCCC 60.883 60.000 2.35 0.00 35.36 4.46
4782 6173 1.219522 CGTTCTGGAACCACACGTCC 61.220 60.000 7.74 0.00 38.03 4.79
4783 6174 0.249155 TCGTTCTGGAACCACACGTC 60.249 55.000 15.75 0.00 38.03 4.34
4784 6175 0.249322 CTCGTTCTGGAACCACACGT 60.249 55.000 15.75 0.00 38.03 4.49
4785 6176 1.557443 GCTCGTTCTGGAACCACACG 61.557 60.000 12.11 12.11 38.03 4.49
4786 6177 0.531974 TGCTCGTTCTGGAACCACAC 60.532 55.000 7.74 0.00 38.03 3.82
4787 6178 0.396435 ATGCTCGTTCTGGAACCACA 59.604 50.000 7.74 4.58 38.03 4.17
4788 6179 0.798776 CATGCTCGTTCTGGAACCAC 59.201 55.000 7.74 0.00 38.03 4.16
4789 6180 0.684535 TCATGCTCGTTCTGGAACCA 59.315 50.000 7.74 0.00 38.03 3.67
4790 6181 1.079503 GTCATGCTCGTTCTGGAACC 58.920 55.000 7.74 0.00 38.03 3.62
4791 6182 1.079503 GGTCATGCTCGTTCTGGAAC 58.920 55.000 3.62 3.62 37.92 3.62
4792 6183 0.976641 AGGTCATGCTCGTTCTGGAA 59.023 50.000 0.00 0.00 0.00 3.53
4793 6184 0.247460 CAGGTCATGCTCGTTCTGGA 59.753 55.000 0.00 0.00 0.00 3.86
4794 6185 0.036952 ACAGGTCATGCTCGTTCTGG 60.037 55.000 0.00 0.00 0.00 3.86
4795 6186 1.073964 CACAGGTCATGCTCGTTCTG 58.926 55.000 0.00 0.00 0.00 3.02
4796 6187 0.681733 ACACAGGTCATGCTCGTTCT 59.318 50.000 0.00 0.00 0.00 3.01
4797 6188 1.071605 GACACAGGTCATGCTCGTTC 58.928 55.000 0.00 0.00 43.73 3.95
4798 6189 0.667487 CGACACAGGTCATGCTCGTT 60.667 55.000 0.00 0.00 44.54 3.85
4799 6190 1.080501 CGACACAGGTCATGCTCGT 60.081 57.895 0.00 0.00 44.54 4.18
4800 6191 1.807165 CCGACACAGGTCATGCTCG 60.807 63.158 0.00 0.00 44.54 5.03
4801 6192 4.192000 CCGACACAGGTCATGCTC 57.808 61.111 0.00 0.00 44.54 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.