Multiple sequence alignment - TraesCS3A01G097200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G097200 chr3A 100.000 5831 0 0 1 5831 63071038 63076868 0.000000e+00 10768.0
1 TraesCS3A01G097200 chr3A 93.910 312 17 2 2 313 740341881 740341572 2.460000e-128 470.0
2 TraesCS3A01G097200 chr3D 91.271 3964 207 69 585 4466 49641858 49645764 0.000000e+00 5275.0
3 TraesCS3A01G097200 chr3D 95.112 1289 35 8 4512 5792 49645993 49647261 0.000000e+00 2006.0
4 TraesCS3A01G097200 chr3D 94.551 312 17 0 2 313 608045682 608045371 3.160000e-132 483.0
5 TraesCS3A01G097200 chr3D 91.277 321 23 5 309 628 49641610 49641926 3.230000e-117 433.0
6 TraesCS3A01G097200 chr3B 91.779 1776 90 25 4081 5831 79127554 79129298 0.000000e+00 2420.0
7 TraesCS3A01G097200 chr3B 93.491 1644 68 16 2331 3957 79125916 79127537 0.000000e+00 2407.0
8 TraesCS3A01G097200 chr3B 89.547 1569 109 30 766 2286 79124351 79125912 0.000000e+00 1938.0
9 TraesCS3A01G097200 chr3B 90.735 313 29 0 1 313 817819295 817818983 9.040000e-113 418.0
10 TraesCS3A01G097200 chr3B 87.709 358 18 12 2035 2379 588910085 588910429 1.520000e-105 394.0
11 TraesCS3A01G097200 chr3B 94.186 172 8 2 309 480 79123715 79123884 1.610000e-65 261.0
12 TraesCS3A01G097200 chr3B 82.653 294 41 7 1592 1885 764812976 764812693 9.700000e-63 252.0
13 TraesCS3A01G097200 chr7A 98.722 313 4 0 1 313 702617765 702617453 1.840000e-154 556.0
14 TraesCS3A01G097200 chr6A 98.722 313 4 0 1 313 283036218 283036530 1.840000e-154 556.0
15 TraesCS3A01G097200 chr6A 98.403 313 5 0 1 313 123507510 123507822 8.540000e-153 551.0
16 TraesCS3A01G097200 chr5A 98.722 313 3 1 1 313 237960300 237960611 6.600000e-154 555.0
17 TraesCS3A01G097200 chr5A 98.083 313 6 0 1 313 416143032 416142720 3.970000e-151 545.0
18 TraesCS3A01G097200 chr7B 97.764 313 7 0 1 313 241772380 241772068 1.850000e-149 540.0
19 TraesCS3A01G097200 chr7B 78.182 715 109 29 1594 2291 506626865 506626181 4.200000e-111 412.0
20 TraesCS3A01G097200 chr7B 88.268 358 16 12 2035 2379 651561702 651562046 7.040000e-109 405.0
21 TraesCS3A01G097200 chr7B 87.989 358 17 12 2035 2379 651736714 651737058 3.270000e-107 399.0
22 TraesCS3A01G097200 chr1A 86.777 484 49 10 1229 1709 276123634 276123163 5.180000e-145 525.0
23 TraesCS3A01G097200 chr6B 86.040 351 37 9 2035 2379 608038625 608038969 3.320000e-97 366.0
24 TraesCS3A01G097200 chr5B 87.869 305 29 5 1407 1709 664217287 664216989 9.300000e-93 351.0
25 TraesCS3A01G097200 chr5B 88.525 183 15 4 1229 1411 664222663 664222487 3.540000e-52 217.0
26 TraesCS3A01G097200 chrUn 84.407 295 36 6 1592 1886 46184763 46184479 1.240000e-71 281.0
27 TraesCS3A01G097200 chr4B 82.653 294 41 7 1592 1885 60056911 60057194 9.700000e-63 252.0
28 TraesCS3A01G097200 chr4B 93.878 49 3 0 2331 2379 667298618 667298666 2.250000e-09 75.0
29 TraesCS3A01G097200 chr4B 100.000 36 0 0 2344 2379 667283472 667283507 3.770000e-07 67.6
30 TraesCS3A01G097200 chr2A 83.521 267 18 12 2126 2379 500244699 500244952 5.880000e-55 226.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G097200 chr3A 63071038 63076868 5830 False 10768.000000 10768 100.000000 1 5831 1 chr3A.!!$F1 5830
1 TraesCS3A01G097200 chr3D 49641610 49647261 5651 False 2571.333333 5275 92.553333 309 5792 3 chr3D.!!$F1 5483
2 TraesCS3A01G097200 chr3B 79123715 79129298 5583 False 1756.500000 2420 92.250750 309 5831 4 chr3B.!!$F2 5522
3 TraesCS3A01G097200 chr7B 506626181 506626865 684 True 412.000000 412 78.182000 1594 2291 1 chr7B.!!$R2 697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
50 51 0.179051 ATGAGCTCAAGCCTAGCAGC 60.179 55.0 22.50 0.0 42.62 5.25 F
52 53 0.179051 GAGCTCAAGCCTAGCAGCAT 60.179 55.0 9.40 0.0 42.62 3.79 F
1391 1759 0.250989 TCCGCACTGTAAAAAGGGGG 60.251 55.0 0.00 0.0 35.08 5.40 F
1885 2271 0.254178 AGCGCCATCTCTTCCATTGT 59.746 50.0 2.29 0.0 0.00 2.71 F
3077 3507 0.738389 ACTGTTTGGTGTGGCGAAAG 59.262 50.0 0.00 0.0 0.00 2.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1948 0.032615 AACCTGGAAAGGGCAACACA 60.033 50.000 0.00 0.0 39.74 3.72 R
1904 2290 0.383949 GAAAACAAGTGCGCAGGGAA 59.616 50.000 12.22 0.0 0.00 3.97 R
3105 3535 0.836606 TTCACCTCAACAGCAGGACA 59.163 50.000 0.00 0.0 34.75 4.02 R
3259 3689 1.338020 GATTGCCGGATGCCTTTTAGG 59.662 52.381 5.05 0.0 40.16 2.69 R
5075 5698 3.438183 TCCAGAGTTGGGAGTAACTACC 58.562 50.000 0.00 0.0 45.10 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.073311 GTACACAGGAATAGCAGAGAACA 57.927 43.478 0.00 0.00 0.00 3.18
23 24 3.931578 ACACAGGAATAGCAGAGAACAC 58.068 45.455 0.00 0.00 0.00 3.32
24 25 3.324846 ACACAGGAATAGCAGAGAACACA 59.675 43.478 0.00 0.00 0.00 3.72
25 26 4.202357 ACACAGGAATAGCAGAGAACACAA 60.202 41.667 0.00 0.00 0.00 3.33
26 27 4.756642 CACAGGAATAGCAGAGAACACAAA 59.243 41.667 0.00 0.00 0.00 2.83
27 28 4.757149 ACAGGAATAGCAGAGAACACAAAC 59.243 41.667 0.00 0.00 0.00 2.93
28 29 4.154918 CAGGAATAGCAGAGAACACAAACC 59.845 45.833 0.00 0.00 0.00 3.27
29 30 4.042187 AGGAATAGCAGAGAACACAAACCT 59.958 41.667 0.00 0.00 0.00 3.50
30 31 5.248477 AGGAATAGCAGAGAACACAAACCTA 59.752 40.000 0.00 0.00 0.00 3.08
31 32 5.938125 GGAATAGCAGAGAACACAAACCTAA 59.062 40.000 0.00 0.00 0.00 2.69
32 33 6.599638 GGAATAGCAGAGAACACAAACCTAAT 59.400 38.462 0.00 0.00 0.00 1.73
33 34 6.992063 ATAGCAGAGAACACAAACCTAATG 57.008 37.500 0.00 0.00 0.00 1.90
34 35 4.973168 AGCAGAGAACACAAACCTAATGA 58.027 39.130 0.00 0.00 0.00 2.57
35 36 4.999950 AGCAGAGAACACAAACCTAATGAG 59.000 41.667 0.00 0.00 0.00 2.90
36 37 4.378874 GCAGAGAACACAAACCTAATGAGC 60.379 45.833 0.00 0.00 0.00 4.26
37 38 4.999950 CAGAGAACACAAACCTAATGAGCT 59.000 41.667 0.00 0.00 0.00 4.09
38 39 5.121454 CAGAGAACACAAACCTAATGAGCTC 59.879 44.000 6.82 6.82 0.00 4.09
39 40 4.973168 AGAACACAAACCTAATGAGCTCA 58.027 39.130 20.79 20.79 0.00 4.26
40 41 5.376625 AGAACACAAACCTAATGAGCTCAA 58.623 37.500 22.50 3.88 0.00 3.02
41 42 5.471456 AGAACACAAACCTAATGAGCTCAAG 59.529 40.000 22.50 14.51 0.00 3.02
42 43 3.503748 ACACAAACCTAATGAGCTCAAGC 59.496 43.478 22.50 0.00 42.49 4.01
43 44 3.084786 ACAAACCTAATGAGCTCAAGCC 58.915 45.455 22.50 0.00 43.38 4.35
44 45 3.245052 ACAAACCTAATGAGCTCAAGCCT 60.245 43.478 22.50 8.29 43.38 4.58
45 46 4.019321 ACAAACCTAATGAGCTCAAGCCTA 60.019 41.667 22.50 9.01 43.38 3.93
46 47 4.414337 AACCTAATGAGCTCAAGCCTAG 57.586 45.455 22.50 17.15 43.38 3.02
47 48 2.103941 ACCTAATGAGCTCAAGCCTAGC 59.896 50.000 22.50 0.00 43.38 3.42
48 49 2.103771 CCTAATGAGCTCAAGCCTAGCA 59.896 50.000 22.50 0.00 42.62 3.49
49 50 2.328819 AATGAGCTCAAGCCTAGCAG 57.671 50.000 22.50 0.00 42.62 4.24
50 51 0.179051 ATGAGCTCAAGCCTAGCAGC 60.179 55.000 22.50 0.00 42.62 5.25
51 52 1.220206 GAGCTCAAGCCTAGCAGCA 59.780 57.895 9.40 0.00 42.62 4.41
52 53 0.179051 GAGCTCAAGCCTAGCAGCAT 60.179 55.000 9.40 0.00 42.62 3.79
53 54 0.464013 AGCTCAAGCCTAGCAGCATG 60.464 55.000 0.00 0.00 42.62 4.06
54 55 0.463295 GCTCAAGCCTAGCAGCATGA 60.463 55.000 0.00 2.16 38.09 3.07
55 56 3.774616 TCAAGCCTAGCAGCATGAG 57.225 52.632 0.00 0.00 39.69 2.90
56 57 1.197812 TCAAGCCTAGCAGCATGAGA 58.802 50.000 0.00 0.00 39.69 3.27
57 58 1.138464 TCAAGCCTAGCAGCATGAGAG 59.862 52.381 0.00 0.00 39.69 3.20
58 59 1.138464 CAAGCCTAGCAGCATGAGAGA 59.862 52.381 0.00 0.00 39.69 3.10
59 60 1.042229 AGCCTAGCAGCATGAGAGAG 58.958 55.000 0.00 0.00 39.69 3.20
60 61 0.600782 GCCTAGCAGCATGAGAGAGC 60.601 60.000 0.00 0.00 39.69 4.09
61 62 0.751452 CCTAGCAGCATGAGAGAGCA 59.249 55.000 0.00 0.00 39.69 4.26
62 63 1.345089 CCTAGCAGCATGAGAGAGCAT 59.655 52.381 0.00 0.00 39.69 3.79
63 64 2.561858 CCTAGCAGCATGAGAGAGCATA 59.438 50.000 0.00 0.00 39.69 3.14
64 65 3.196039 CCTAGCAGCATGAGAGAGCATAT 59.804 47.826 0.00 0.00 39.69 1.78
65 66 3.773418 AGCAGCATGAGAGAGCATATT 57.227 42.857 0.00 0.00 39.69 1.28
66 67 4.886496 AGCAGCATGAGAGAGCATATTA 57.114 40.909 0.00 0.00 39.69 0.98
67 68 4.823157 AGCAGCATGAGAGAGCATATTAG 58.177 43.478 0.00 0.00 39.69 1.73
68 69 3.371591 GCAGCATGAGAGAGCATATTAGC 59.628 47.826 0.00 0.00 39.69 3.09
69 70 4.823157 CAGCATGAGAGAGCATATTAGCT 58.177 43.478 0.00 0.00 44.44 3.32
70 71 5.239351 CAGCATGAGAGAGCATATTAGCTT 58.761 41.667 0.00 0.00 42.26 3.74
71 72 5.701750 CAGCATGAGAGAGCATATTAGCTTT 59.298 40.000 0.00 0.00 42.26 3.51
72 73 5.701750 AGCATGAGAGAGCATATTAGCTTTG 59.298 40.000 0.00 0.00 46.75 2.77
73 74 5.469421 GCATGAGAGAGCATATTAGCTTTGT 59.531 40.000 0.00 0.00 46.75 2.83
74 75 6.648310 GCATGAGAGAGCATATTAGCTTTGTA 59.352 38.462 0.00 0.00 46.75 2.41
75 76 7.172190 GCATGAGAGAGCATATTAGCTTTGTAA 59.828 37.037 0.00 0.00 46.75 2.41
76 77 8.710551 CATGAGAGAGCATATTAGCTTTGTAAG 58.289 37.037 0.00 0.00 46.75 2.34
92 93 7.515957 CTTTGTAAGCAGGCAATTTATTCAG 57.484 36.000 0.00 0.00 0.00 3.02
93 94 6.832520 TTGTAAGCAGGCAATTTATTCAGA 57.167 33.333 0.00 0.00 0.00 3.27
94 95 6.832520 TGTAAGCAGGCAATTTATTCAGAA 57.167 33.333 0.00 0.00 0.00 3.02
95 96 7.225784 TGTAAGCAGGCAATTTATTCAGAAA 57.774 32.000 0.00 0.00 0.00 2.52
96 97 7.839907 TGTAAGCAGGCAATTTATTCAGAAAT 58.160 30.769 0.00 0.00 0.00 2.17
97 98 8.313292 TGTAAGCAGGCAATTTATTCAGAAATT 58.687 29.630 0.00 0.00 39.13 1.82
98 99 9.154847 GTAAGCAGGCAATTTATTCAGAAATTT 57.845 29.630 0.00 0.00 36.99 1.82
100 101 9.895138 AAGCAGGCAATTTATTCAGAAATTTAT 57.105 25.926 0.00 0.00 36.99 1.40
101 102 9.538508 AGCAGGCAATTTATTCAGAAATTTATC 57.461 29.630 0.00 0.00 36.99 1.75
102 103 9.316730 GCAGGCAATTTATTCAGAAATTTATCA 57.683 29.630 0.00 0.00 36.99 2.15
122 123 8.964420 TTATCAATAACAAAGTTGTAAGCAGC 57.036 30.769 0.00 0.00 41.31 5.25
123 124 6.384258 TCAATAACAAAGTTGTAAGCAGCA 57.616 33.333 0.00 0.00 41.31 4.41
124 125 6.437928 TCAATAACAAAGTTGTAAGCAGCAG 58.562 36.000 0.00 0.00 41.31 4.24
125 126 6.039270 TCAATAACAAAGTTGTAAGCAGCAGT 59.961 34.615 0.00 0.00 41.31 4.40
126 127 4.718940 AACAAAGTTGTAAGCAGCAGTT 57.281 36.364 0.00 0.00 41.31 3.16
127 128 4.292977 ACAAAGTTGTAAGCAGCAGTTC 57.707 40.909 0.00 0.00 40.16 3.01
128 129 3.947834 ACAAAGTTGTAAGCAGCAGTTCT 59.052 39.130 0.00 0.00 40.16 3.01
129 130 5.123227 ACAAAGTTGTAAGCAGCAGTTCTA 58.877 37.500 0.00 0.00 40.16 2.10
130 131 5.765182 ACAAAGTTGTAAGCAGCAGTTCTAT 59.235 36.000 0.00 0.00 40.16 1.98
131 132 6.263168 ACAAAGTTGTAAGCAGCAGTTCTATT 59.737 34.615 0.00 0.00 40.16 1.73
132 133 6.884280 AAGTTGTAAGCAGCAGTTCTATTT 57.116 33.333 0.00 0.00 0.00 1.40
133 134 6.884280 AGTTGTAAGCAGCAGTTCTATTTT 57.116 33.333 0.00 0.00 0.00 1.82
134 135 7.277174 AGTTGTAAGCAGCAGTTCTATTTTT 57.723 32.000 0.00 0.00 0.00 1.94
135 136 8.391075 AGTTGTAAGCAGCAGTTCTATTTTTA 57.609 30.769 0.00 0.00 0.00 1.52
136 137 8.507249 AGTTGTAAGCAGCAGTTCTATTTTTAG 58.493 33.333 0.00 0.00 0.00 1.85
137 138 6.842163 TGTAAGCAGCAGTTCTATTTTTAGC 58.158 36.000 0.00 0.00 0.00 3.09
138 139 5.964958 AAGCAGCAGTTCTATTTTTAGCA 57.035 34.783 0.00 0.00 0.00 3.49
139 140 5.557891 AGCAGCAGTTCTATTTTTAGCAG 57.442 39.130 0.00 0.00 0.00 4.24
140 141 4.397417 AGCAGCAGTTCTATTTTTAGCAGG 59.603 41.667 0.00 0.00 0.00 4.85
141 142 4.396166 GCAGCAGTTCTATTTTTAGCAGGA 59.604 41.667 0.00 0.00 0.00 3.86
142 143 5.106157 GCAGCAGTTCTATTTTTAGCAGGAA 60.106 40.000 0.00 0.00 0.00 3.36
143 144 6.549952 CAGCAGTTCTATTTTTAGCAGGAAG 58.450 40.000 0.00 0.00 0.00 3.46
144 145 6.372659 CAGCAGTTCTATTTTTAGCAGGAAGA 59.627 38.462 0.00 0.00 0.00 2.87
145 146 6.942576 AGCAGTTCTATTTTTAGCAGGAAGAA 59.057 34.615 0.00 0.00 0.00 2.52
146 147 7.613411 AGCAGTTCTATTTTTAGCAGGAAGAAT 59.387 33.333 0.00 0.00 0.00 2.40
147 148 8.893727 GCAGTTCTATTTTTAGCAGGAAGAATA 58.106 33.333 0.00 0.00 0.00 1.75
150 151 9.723447 GTTCTATTTTTAGCAGGAAGAATAAGC 57.277 33.333 0.00 0.00 0.00 3.09
151 152 8.142994 TCTATTTTTAGCAGGAAGAATAAGCG 57.857 34.615 0.00 0.00 0.00 4.68
152 153 5.560966 TTTTTAGCAGGAAGAATAAGCGG 57.439 39.130 0.00 0.00 0.00 5.52
153 154 4.481368 TTTAGCAGGAAGAATAAGCGGA 57.519 40.909 0.00 0.00 0.00 5.54
154 155 4.689612 TTAGCAGGAAGAATAAGCGGAT 57.310 40.909 0.00 0.00 0.00 4.18
155 156 2.843701 AGCAGGAAGAATAAGCGGATG 58.156 47.619 0.00 0.00 0.00 3.51
156 157 2.435805 AGCAGGAAGAATAAGCGGATGA 59.564 45.455 0.00 0.00 0.00 2.92
157 158 2.545946 GCAGGAAGAATAAGCGGATGAC 59.454 50.000 0.00 0.00 0.00 3.06
158 159 3.134458 CAGGAAGAATAAGCGGATGACC 58.866 50.000 0.00 0.00 0.00 4.02
159 160 2.771943 AGGAAGAATAAGCGGATGACCA 59.228 45.455 0.00 0.00 35.59 4.02
160 161 3.199946 AGGAAGAATAAGCGGATGACCAA 59.800 43.478 0.00 0.00 35.59 3.67
161 162 3.561725 GGAAGAATAAGCGGATGACCAAG 59.438 47.826 0.00 0.00 35.59 3.61
162 163 3.199880 AGAATAAGCGGATGACCAAGG 57.800 47.619 0.00 0.00 35.59 3.61
163 164 2.505819 AGAATAAGCGGATGACCAAGGT 59.494 45.455 0.00 0.00 35.59 3.50
164 165 2.332063 ATAAGCGGATGACCAAGGTG 57.668 50.000 0.00 0.00 35.59 4.00
165 166 0.251916 TAAGCGGATGACCAAGGTGG 59.748 55.000 0.00 0.00 45.02 4.61
166 167 2.438434 GCGGATGACCAAGGTGGG 60.438 66.667 0.00 0.00 43.37 4.61
167 168 3.077907 CGGATGACCAAGGTGGGT 58.922 61.111 0.00 0.00 43.37 4.51
168 169 1.377202 CGGATGACCAAGGTGGGTG 60.377 63.158 0.00 0.00 43.37 4.61
169 170 1.836999 CGGATGACCAAGGTGGGTGA 61.837 60.000 0.00 0.00 43.37 4.02
170 171 0.404040 GGATGACCAAGGTGGGTGAA 59.596 55.000 0.00 0.00 43.37 3.18
171 172 1.203001 GGATGACCAAGGTGGGTGAAA 60.203 52.381 0.00 0.00 43.37 2.69
172 173 2.557452 GGATGACCAAGGTGGGTGAAAT 60.557 50.000 0.00 0.00 43.37 2.17
173 174 2.765689 TGACCAAGGTGGGTGAAATT 57.234 45.000 0.00 0.00 43.37 1.82
174 175 2.315176 TGACCAAGGTGGGTGAAATTG 58.685 47.619 0.00 0.00 43.37 2.32
175 176 2.316108 GACCAAGGTGGGTGAAATTGT 58.684 47.619 0.00 0.00 43.37 2.71
176 177 2.698274 GACCAAGGTGGGTGAAATTGTT 59.302 45.455 0.00 0.00 43.37 2.83
177 178 3.892588 GACCAAGGTGGGTGAAATTGTTA 59.107 43.478 0.00 0.00 43.37 2.41
178 179 4.488770 ACCAAGGTGGGTGAAATTGTTAT 58.511 39.130 0.00 0.00 43.37 1.89
179 180 4.526650 ACCAAGGTGGGTGAAATTGTTATC 59.473 41.667 0.00 0.00 43.37 1.75
180 181 4.081697 CCAAGGTGGGTGAAATTGTTATCC 60.082 45.833 0.00 0.00 32.67 2.59
181 182 4.396357 AGGTGGGTGAAATTGTTATCCA 57.604 40.909 0.00 0.00 0.00 3.41
182 183 4.946646 AGGTGGGTGAAATTGTTATCCAT 58.053 39.130 0.00 0.00 0.00 3.41
183 184 4.711355 AGGTGGGTGAAATTGTTATCCATG 59.289 41.667 0.00 0.00 0.00 3.66
184 185 4.709397 GGTGGGTGAAATTGTTATCCATGA 59.291 41.667 0.00 0.00 0.00 3.07
185 186 5.363580 GGTGGGTGAAATTGTTATCCATGAT 59.636 40.000 0.00 0.00 0.00 2.45
186 187 6.549364 GGTGGGTGAAATTGTTATCCATGATA 59.451 38.462 0.00 0.00 0.00 2.15
187 188 7.255590 GGTGGGTGAAATTGTTATCCATGATAG 60.256 40.741 0.00 0.00 0.00 2.08
188 189 7.502226 GTGGGTGAAATTGTTATCCATGATAGA 59.498 37.037 0.00 0.00 0.00 1.98
189 190 8.058235 TGGGTGAAATTGTTATCCATGATAGAA 58.942 33.333 0.00 0.00 0.00 2.10
190 191 8.912988 GGGTGAAATTGTTATCCATGATAGAAA 58.087 33.333 0.00 0.00 0.00 2.52
191 192 9.736023 GGTGAAATTGTTATCCATGATAGAAAC 57.264 33.333 0.00 0.00 0.00 2.78
203 204 9.865321 ATCCATGATAGAAACATGAAAAACTTG 57.135 29.630 0.00 0.00 45.22 3.16
204 205 7.814107 TCCATGATAGAAACATGAAAAACTTGC 59.186 33.333 0.00 0.00 45.22 4.01
205 206 7.816031 CCATGATAGAAACATGAAAAACTTGCT 59.184 33.333 0.00 0.00 45.22 3.91
206 207 9.199982 CATGATAGAAACATGAAAAACTTGCTT 57.800 29.630 0.00 0.00 45.22 3.91
212 213 9.468532 AGAAACATGAAAAACTTGCTTAATCTC 57.531 29.630 0.00 0.00 0.00 2.75
213 214 9.468532 GAAACATGAAAAACTTGCTTAATCTCT 57.531 29.630 0.00 0.00 0.00 3.10
214 215 9.822185 AAACATGAAAAACTTGCTTAATCTCTT 57.178 25.926 0.00 0.00 0.00 2.85
215 216 8.807667 ACATGAAAAACTTGCTTAATCTCTTG 57.192 30.769 0.00 0.00 0.00 3.02
216 217 8.632679 ACATGAAAAACTTGCTTAATCTCTTGA 58.367 29.630 0.00 0.00 0.00 3.02
217 218 9.467258 CATGAAAAACTTGCTTAATCTCTTGAA 57.533 29.630 0.00 0.00 0.00 2.69
223 224 7.856145 ACTTGCTTAATCTCTTGAATAGTGG 57.144 36.000 0.00 0.00 0.00 4.00
224 225 7.398024 ACTTGCTTAATCTCTTGAATAGTGGT 58.602 34.615 0.00 0.00 0.00 4.16
225 226 7.885399 ACTTGCTTAATCTCTTGAATAGTGGTT 59.115 33.333 0.00 0.00 0.00 3.67
226 227 8.635765 TTGCTTAATCTCTTGAATAGTGGTTT 57.364 30.769 0.00 0.00 0.00 3.27
227 228 8.044060 TGCTTAATCTCTTGAATAGTGGTTTG 57.956 34.615 0.00 0.00 0.00 2.93
228 229 7.882791 TGCTTAATCTCTTGAATAGTGGTTTGA 59.117 33.333 0.00 0.00 0.00 2.69
229 230 8.178313 GCTTAATCTCTTGAATAGTGGTTTGAC 58.822 37.037 0.00 0.00 0.00 3.18
230 231 9.442047 CTTAATCTCTTGAATAGTGGTTTGACT 57.558 33.333 0.00 0.00 0.00 3.41
233 234 8.779354 ATCTCTTGAATAGTGGTTTGACTAAC 57.221 34.615 0.00 0.00 32.19 2.34
234 235 7.732025 TCTCTTGAATAGTGGTTTGACTAACA 58.268 34.615 2.26 0.00 38.55 2.41
235 236 8.375506 TCTCTTGAATAGTGGTTTGACTAACAT 58.624 33.333 2.26 0.00 38.55 2.71
236 237 8.322906 TCTTGAATAGTGGTTTGACTAACATG 57.677 34.615 2.26 0.00 38.55 3.21
237 238 8.154203 TCTTGAATAGTGGTTTGACTAACATGA 58.846 33.333 0.00 0.00 38.55 3.07
238 239 7.905604 TGAATAGTGGTTTGACTAACATGAG 57.094 36.000 0.00 0.00 38.55 2.90
239 240 7.450074 TGAATAGTGGTTTGACTAACATGAGT 58.550 34.615 0.00 0.00 38.55 3.41
240 241 8.590204 TGAATAGTGGTTTGACTAACATGAGTA 58.410 33.333 0.00 0.00 38.55 2.59
241 242 8.773404 AATAGTGGTTTGACTAACATGAGTAC 57.227 34.615 0.00 0.00 38.55 2.73
242 243 6.420913 AGTGGTTTGACTAACATGAGTACT 57.579 37.500 0.00 0.00 38.55 2.73
243 244 7.534723 AGTGGTTTGACTAACATGAGTACTA 57.465 36.000 0.00 0.00 38.55 1.82
244 245 7.959175 AGTGGTTTGACTAACATGAGTACTAA 58.041 34.615 0.00 0.00 38.55 2.24
245 246 8.426489 AGTGGTTTGACTAACATGAGTACTAAA 58.574 33.333 0.00 0.00 38.55 1.85
246 247 9.048446 GTGGTTTGACTAACATGAGTACTAAAA 57.952 33.333 0.00 0.00 38.55 1.52
247 248 9.616156 TGGTTTGACTAACATGAGTACTAAAAA 57.384 29.630 0.00 0.00 38.55 1.94
257 258 9.944376 AACATGAGTACTAAAAAGAATAGCAGA 57.056 29.630 0.00 0.00 0.00 4.26
263 264 8.678199 AGTACTAAAAAGAATAGCAGATTTGGC 58.322 33.333 0.00 0.00 0.00 4.52
264 265 6.867550 ACTAAAAAGAATAGCAGATTTGGCC 58.132 36.000 0.00 0.00 0.00 5.36
265 266 4.743057 AAAAGAATAGCAGATTTGGCCC 57.257 40.909 0.00 0.00 0.00 5.80
266 267 3.386932 AAGAATAGCAGATTTGGCCCA 57.613 42.857 0.00 0.00 0.00 5.36
267 268 3.386932 AGAATAGCAGATTTGGCCCAA 57.613 42.857 0.00 0.00 0.00 4.12
268 269 3.919834 AGAATAGCAGATTTGGCCCAAT 58.080 40.909 0.72 0.72 0.00 3.16
269 270 4.292643 AGAATAGCAGATTTGGCCCAATT 58.707 39.130 3.13 0.00 0.00 2.32
270 271 4.718276 AGAATAGCAGATTTGGCCCAATTT 59.282 37.500 3.13 0.00 0.00 1.82
271 272 2.773993 AGCAGATTTGGCCCAATTTG 57.226 45.000 14.03 14.03 0.00 2.32
272 273 1.279846 AGCAGATTTGGCCCAATTTGG 59.720 47.619 18.41 8.56 37.25 3.28
273 274 1.003464 GCAGATTTGGCCCAATTTGGT 59.997 47.619 18.41 0.00 35.17 3.67
274 275 2.702261 CAGATTTGGCCCAATTTGGTG 58.298 47.619 14.26 7.05 35.17 4.17
275 276 2.038820 CAGATTTGGCCCAATTTGGTGT 59.961 45.455 14.26 0.00 35.17 4.16
276 277 2.710471 AGATTTGGCCCAATTTGGTGTT 59.290 40.909 14.26 0.00 35.17 3.32
277 278 3.138098 AGATTTGGCCCAATTTGGTGTTT 59.862 39.130 14.26 0.00 35.17 2.83
278 279 2.338577 TTGGCCCAATTTGGTGTTTG 57.661 45.000 14.26 0.00 35.17 2.93
279 280 1.500474 TGGCCCAATTTGGTGTTTGA 58.500 45.000 14.26 0.00 35.17 2.69
280 281 1.139853 TGGCCCAATTTGGTGTTTGAC 59.860 47.619 14.26 1.35 35.17 3.18
281 282 1.542328 GGCCCAATTTGGTGTTTGACC 60.542 52.381 14.26 1.04 46.37 4.02
282 283 1.416030 GCCCAATTTGGTGTTTGACCT 59.584 47.619 14.26 0.00 46.32 3.85
283 284 2.806382 GCCCAATTTGGTGTTTGACCTG 60.806 50.000 14.26 0.00 46.32 4.00
284 285 2.697751 CCCAATTTGGTGTTTGACCTGA 59.302 45.455 14.26 0.00 46.32 3.86
285 286 3.133721 CCCAATTTGGTGTTTGACCTGAA 59.866 43.478 14.26 0.00 46.32 3.02
286 287 4.383552 CCCAATTTGGTGTTTGACCTGAAA 60.384 41.667 14.26 0.00 46.32 2.69
287 288 5.367302 CCAATTTGGTGTTTGACCTGAAAT 58.633 37.500 7.31 0.00 46.32 2.17
288 289 6.463614 CCCAATTTGGTGTTTGACCTGAAATA 60.464 38.462 14.26 0.00 46.32 1.40
289 290 7.160726 CCAATTTGGTGTTTGACCTGAAATAT 58.839 34.615 7.31 0.00 46.32 1.28
290 291 8.310382 CCAATTTGGTGTTTGACCTGAAATATA 58.690 33.333 7.31 0.00 46.32 0.86
291 292 9.703892 CAATTTGGTGTTTGACCTGAAATATAA 57.296 29.630 0.00 0.00 46.32 0.98
292 293 9.705290 AATTTGGTGTTTGACCTGAAATATAAC 57.295 29.630 0.00 0.00 46.32 1.89
293 294 7.825331 TTGGTGTTTGACCTGAAATATAACA 57.175 32.000 0.00 0.00 46.32 2.41
294 295 7.825331 TGGTGTTTGACCTGAAATATAACAA 57.175 32.000 0.00 0.00 46.32 2.83
295 296 8.239038 TGGTGTTTGACCTGAAATATAACAAA 57.761 30.769 0.00 0.00 46.32 2.83
296 297 8.696374 TGGTGTTTGACCTGAAATATAACAAAA 58.304 29.630 0.00 0.00 46.32 2.44
297 298 9.191995 GGTGTTTGACCTGAAATATAACAAAAG 57.808 33.333 0.00 0.00 42.25 2.27
298 299 9.744468 GTGTTTGACCTGAAATATAACAAAAGT 57.256 29.630 0.00 0.00 0.00 2.66
299 300 9.743057 TGTTTGACCTGAAATATAACAAAAGTG 57.257 29.630 0.00 0.00 0.00 3.16
300 301 9.959749 GTTTGACCTGAAATATAACAAAAGTGA 57.040 29.630 0.00 0.00 0.00 3.41
303 304 8.739039 TGACCTGAAATATAACAAAAGTGATGG 58.261 33.333 0.00 0.00 0.00 3.51
304 305 8.877864 ACCTGAAATATAACAAAAGTGATGGA 57.122 30.769 0.00 0.00 0.00 3.41
305 306 9.479549 ACCTGAAATATAACAAAAGTGATGGAT 57.520 29.630 0.00 0.00 0.00 3.41
306 307 9.740239 CCTGAAATATAACAAAAGTGATGGATG 57.260 33.333 0.00 0.00 0.00 3.51
320 321 6.243900 AGTGATGGATGAGTTGAAGAAATGT 58.756 36.000 0.00 0.00 0.00 2.71
329 330 5.106038 TGAGTTGAAGAAATGTCATGCCATC 60.106 40.000 0.00 0.00 0.00 3.51
342 343 7.172868 TGTCATGCCATCTTTTGTATCAAAT 57.827 32.000 0.00 0.00 0.00 2.32
519 838 9.994432 GAGAATCCAAGACAAATGTTAACTATG 57.006 33.333 7.22 5.83 0.00 2.23
559 878 5.875930 TCTTTTCTCTCACAAAACCGAAAC 58.124 37.500 0.00 0.00 0.00 2.78
562 881 4.044336 TCTCTCACAAAACCGAAACGTA 57.956 40.909 0.00 0.00 0.00 3.57
594 918 6.642707 TGAGGGGTAACAAAAATGTTAGTG 57.357 37.500 1.87 0.00 35.25 2.74
598 922 7.853299 AGGGGTAACAAAAATGTTAGTGTTTT 58.147 30.769 1.87 0.00 35.25 2.43
683 1007 8.621286 AGTAAAAAGAACTTGTACATGAACCAG 58.379 33.333 15.13 2.21 0.00 4.00
727 1051 3.619929 GCATGTTGCATTTCCTCCATTTC 59.380 43.478 0.00 0.00 44.26 2.17
728 1052 3.574284 TGTTGCATTTCCTCCATTTCG 57.426 42.857 0.00 0.00 0.00 3.46
815 1152 1.832167 GCACCCAGCCCACAGAAAA 60.832 57.895 0.00 0.00 37.23 2.29
933 1278 2.366301 TCCCCGCCATTGCTCCTA 60.366 61.111 0.00 0.00 34.43 2.94
965 1317 0.322906 CCCAACTCCCCAAGAAGAGC 60.323 60.000 0.00 0.00 33.18 4.09
1226 1578 2.871096 TGGCTTTATTTCCCTGTCGT 57.129 45.000 0.00 0.00 0.00 4.34
1284 1648 0.606401 CGTCTGCCAGTTTCCCATGT 60.606 55.000 0.00 0.00 0.00 3.21
1285 1649 1.338674 CGTCTGCCAGTTTCCCATGTA 60.339 52.381 0.00 0.00 0.00 2.29
1302 1666 5.877012 CCCATGTATCAGGCTATCATGTTAC 59.123 44.000 14.45 3.61 35.54 2.50
1321 1689 3.409026 ACAGATTAATCGGCCTCATCC 57.591 47.619 14.56 0.00 0.00 3.51
1328 1696 6.897966 AGATTAATCGGCCTCATCCTAGATAA 59.102 38.462 9.78 0.00 0.00 1.75
1369 1737 7.342769 TGATAATCTTATGTACACAGTCCGT 57.657 36.000 0.00 0.00 0.00 4.69
1390 1758 1.165270 CTCCGCACTGTAAAAAGGGG 58.835 55.000 0.00 0.00 35.61 4.79
1391 1759 0.250989 TCCGCACTGTAAAAAGGGGG 60.251 55.000 0.00 0.00 35.08 5.40
1392 1760 0.538746 CCGCACTGTAAAAAGGGGGT 60.539 55.000 0.00 0.00 31.79 4.95
1400 1768 6.630071 CACTGTAAAAAGGGGGTAATGATTG 58.370 40.000 0.00 0.00 0.00 2.67
1421 1789 9.919416 TGATTGGTATCAAAATGAATAGAAGGA 57.081 29.630 0.00 0.00 37.83 3.36
1435 1810 7.721402 TGAATAGAAGGAGTAGAAGAATGCTC 58.279 38.462 0.00 0.00 0.00 4.26
1464 1839 1.748493 ATGCGTTTGCGGATTTATGGT 59.252 42.857 0.00 0.00 46.84 3.55
1469 1845 0.396417 TTGCGGATTTATGGTGGGGG 60.396 55.000 0.00 0.00 0.00 5.40
1566 1947 5.711976 AGGTGAAATGGGATTTCTTACACTG 59.288 40.000 9.76 0.00 46.71 3.66
1567 1948 5.476945 GGTGAAATGGGATTTCTTACACTGT 59.523 40.000 9.76 0.00 46.71 3.55
1702 2084 1.378119 CCGGGGCTTTCAAGGTACC 60.378 63.158 2.73 2.73 0.00 3.34
1703 2088 1.378119 CGGGGCTTTCAAGGTACCC 60.378 63.158 8.74 0.00 40.05 3.69
1719 2104 0.322975 ACCCACATGACTCTGCTGAC 59.677 55.000 0.00 0.00 0.00 3.51
1722 2107 2.617276 CCCACATGACTCTGCTGACATT 60.617 50.000 0.00 0.00 0.00 2.71
1737 2122 1.537202 GACATTCTGCCGTCAAGCTTT 59.463 47.619 0.00 0.00 32.24 3.51
1756 2142 1.979855 TGGCTACTGCTTCTTTTGCA 58.020 45.000 0.00 0.00 39.59 4.08
1758 2144 2.229543 TGGCTACTGCTTCTTTTGCATG 59.770 45.455 0.00 0.00 39.86 4.06
1828 2214 3.809832 ACAAGTTCACAGATTTCTCACCG 59.190 43.478 0.00 0.00 0.00 4.94
1885 2271 0.254178 AGCGCCATCTCTTCCATTGT 59.746 50.000 2.29 0.00 0.00 2.71
1904 2290 5.477607 TTGTGTGCCTGTATGTTACTACT 57.522 39.130 0.00 0.00 0.00 2.57
1911 2297 4.694339 CCTGTATGTTACTACTTCCCTGC 58.306 47.826 0.00 0.00 0.00 4.85
1924 2310 0.749818 TCCCTGCGCACTTGTTTTCA 60.750 50.000 5.66 0.00 0.00 2.69
1928 2318 2.865551 CCTGCGCACTTGTTTTCATTTT 59.134 40.909 5.66 0.00 0.00 1.82
1933 2323 5.750547 TGCGCACTTGTTTTCATTTTATCAA 59.249 32.000 5.66 0.00 0.00 2.57
1936 2326 7.798052 GCGCACTTGTTTTCATTTTATCAATTT 59.202 29.630 0.30 0.00 0.00 1.82
1968 2363 1.474077 GTGTGATTGGCTGGTGGAATC 59.526 52.381 0.00 0.00 0.00 2.52
1971 2366 1.288633 TGATTGGCTGGTGGAATCCAT 59.711 47.619 4.81 0.00 35.28 3.41
1974 2369 1.002069 TGGCTGGTGGAATCCATCTT 58.998 50.000 14.38 0.00 35.30 2.40
1977 2372 2.019984 GCTGGTGGAATCCATCTTGAC 58.980 52.381 14.38 0.00 35.30 3.18
1978 2373 2.356535 GCTGGTGGAATCCATCTTGACT 60.357 50.000 14.38 0.00 35.30 3.41
1981 2376 3.012518 GGTGGAATCCATCTTGACTGTG 58.987 50.000 4.81 0.00 35.28 3.66
2028 2424 2.069273 CAGAATTCGTGGACACTGGAC 58.931 52.381 0.00 0.00 0.00 4.02
2149 2546 5.679734 AAGCTCTTGTCATGTTGTTACAG 57.320 39.130 0.00 0.00 37.77 2.74
2161 2558 8.664798 GTCATGTTGTTACAGTAATGCATTCTA 58.335 33.333 16.86 0.00 37.77 2.10
2186 2583 8.691661 ATTAACAATTTCTGTGTCCAGTAACT 57.308 30.769 0.00 0.00 38.67 2.24
2188 2585 7.492352 AACAATTTCTGTGTCCAGTAACTAC 57.508 36.000 0.00 0.00 38.67 2.73
2291 2701 8.416329 AGTAAGAACCGAACTTAGTTTTCTACA 58.584 33.333 9.94 1.50 31.89 2.74
2293 2703 7.710766 AGAACCGAACTTAGTTTTCTACAAG 57.289 36.000 8.31 0.00 31.46 3.16
2294 2704 5.919272 ACCGAACTTAGTTTTCTACAAGC 57.081 39.130 0.00 0.00 31.46 4.01
2295 2705 5.362263 ACCGAACTTAGTTTTCTACAAGCA 58.638 37.500 0.00 0.00 31.46 3.91
2296 2706 5.818857 ACCGAACTTAGTTTTCTACAAGCAA 59.181 36.000 0.00 0.00 31.46 3.91
2297 2707 6.134061 CCGAACTTAGTTTTCTACAAGCAAC 58.866 40.000 0.00 0.00 31.46 4.17
2298 2708 6.018180 CCGAACTTAGTTTTCTACAAGCAACT 60.018 38.462 0.00 0.00 33.95 3.16
2299 2709 7.407337 CGAACTTAGTTTTCTACAAGCAACTT 58.593 34.615 0.00 0.00 31.83 2.66
2300 2710 7.583040 CGAACTTAGTTTTCTACAAGCAACTTC 59.417 37.037 0.00 0.00 31.83 3.01
2301 2711 7.859325 ACTTAGTTTTCTACAAGCAACTTCA 57.141 32.000 0.00 0.00 31.83 3.02
2302 2712 8.451908 ACTTAGTTTTCTACAAGCAACTTCAT 57.548 30.769 0.00 0.00 31.83 2.57
2303 2713 8.345565 ACTTAGTTTTCTACAAGCAACTTCATG 58.654 33.333 0.00 0.00 31.83 3.07
2304 2714 5.523369 AGTTTTCTACAAGCAACTTCATGC 58.477 37.500 0.00 0.00 46.78 4.06
2305 2715 7.013274 TTAGTTTTCTACAAGCAACTTCATGCT 59.987 33.333 0.00 0.00 44.23 3.79
2316 2726 4.365723 CAACTTCATGCTTGAGCTTTGTT 58.634 39.130 4.44 2.87 42.66 2.83
2328 2738 6.183360 GCTTGAGCTTTGTTATTTCCCCATAT 60.183 38.462 0.00 0.00 38.21 1.78
2397 2817 7.862873 GCATTTGATAGCCTAAATTACTTGTCC 59.137 37.037 0.00 0.00 0.00 4.02
2493 2916 8.418597 AATTATGCTCCATTTCATGCTAATCT 57.581 30.769 0.00 0.00 0.00 2.40
2740 3164 0.884704 TTGCCGTGCTTCCTGTTCTC 60.885 55.000 0.00 0.00 0.00 2.87
3040 3470 3.253432 CCCTGACCTCTAAAACTGTTTGC 59.747 47.826 6.53 0.00 0.00 3.68
3077 3507 0.738389 ACTGTTTGGTGTGGCGAAAG 59.262 50.000 0.00 0.00 0.00 2.62
3105 3535 7.750229 TCATCTGTTGATTTTCTAGCAAAGT 57.250 32.000 0.00 0.00 0.00 2.66
3106 3536 7.587629 TCATCTGTTGATTTTCTAGCAAAGTG 58.412 34.615 0.00 0.00 0.00 3.16
3130 3560 5.880332 GTCCTGCTGTTGAGGTGAATTTATA 59.120 40.000 0.00 0.00 31.85 0.98
3133 3563 6.375455 CCTGCTGTTGAGGTGAATTTATAACT 59.625 38.462 0.00 0.00 0.00 2.24
3155 3585 4.836125 TTGAACTCAGAAATGGACTTGC 57.164 40.909 0.00 0.00 0.00 4.01
3162 3592 3.960102 TCAGAAATGGACTTGCTGGTTTT 59.040 39.130 0.00 0.00 0.00 2.43
3183 3613 7.700656 GGTTTTACCATGTAATTCATTTCCTCG 59.299 37.037 0.00 0.00 38.42 4.63
3185 3615 5.818136 ACCATGTAATTCATTTCCTCGTG 57.182 39.130 0.00 0.00 34.09 4.35
3186 3616 4.096382 ACCATGTAATTCATTTCCTCGTGC 59.904 41.667 0.00 0.00 34.09 5.34
3190 3620 7.255242 CCATGTAATTCATTTCCTCGTGCTAAT 60.255 37.037 0.00 0.00 34.09 1.73
3196 3626 7.709269 TTCATTTCCTCGTGCTAATATACAC 57.291 36.000 0.00 0.00 0.00 2.90
3198 3628 7.441836 TCATTTCCTCGTGCTAATATACACAT 58.558 34.615 0.00 0.00 36.57 3.21
3204 3634 6.584184 CCTCGTGCTAATATACACATCTCTTG 59.416 42.308 0.00 0.00 36.57 3.02
3209 3639 7.875041 GTGCTAATATACACATCTCTTGACCAT 59.125 37.037 0.00 0.00 36.77 3.55
3212 3642 7.502120 AATATACACATCTCTTGACCATTGC 57.498 36.000 0.00 0.00 0.00 3.56
3213 3643 3.430042 ACACATCTCTTGACCATTGCT 57.570 42.857 0.00 0.00 0.00 3.91
3214 3644 3.759581 ACACATCTCTTGACCATTGCTT 58.240 40.909 0.00 0.00 0.00 3.91
3215 3645 4.147321 ACACATCTCTTGACCATTGCTTT 58.853 39.130 0.00 0.00 0.00 3.51
3216 3646 5.316167 ACACATCTCTTGACCATTGCTTTA 58.684 37.500 0.00 0.00 0.00 1.85
3217 3647 5.948162 ACACATCTCTTGACCATTGCTTTAT 59.052 36.000 0.00 0.00 0.00 1.40
3218 3648 6.435277 ACACATCTCTTGACCATTGCTTTATT 59.565 34.615 0.00 0.00 0.00 1.40
3219 3649 6.750501 CACATCTCTTGACCATTGCTTTATTG 59.249 38.462 0.00 0.00 0.00 1.90
3220 3650 6.660521 ACATCTCTTGACCATTGCTTTATTGA 59.339 34.615 0.00 0.00 0.00 2.57
3221 3651 6.500684 TCTCTTGACCATTGCTTTATTGAC 57.499 37.500 0.00 0.00 0.00 3.18
3222 3652 6.003326 TCTCTTGACCATTGCTTTATTGACA 58.997 36.000 0.00 0.00 0.00 3.58
3223 3653 6.660521 TCTCTTGACCATTGCTTTATTGACAT 59.339 34.615 0.00 0.00 0.00 3.06
3224 3654 7.828717 TCTCTTGACCATTGCTTTATTGACATA 59.171 33.333 0.00 0.00 0.00 2.29
3225 3655 8.523915 TCTTGACCATTGCTTTATTGACATAT 57.476 30.769 0.00 0.00 0.00 1.78
3226 3656 8.970020 TCTTGACCATTGCTTTATTGACATATT 58.030 29.630 0.00 0.00 0.00 1.28
3227 3657 9.590451 CTTGACCATTGCTTTATTGACATATTT 57.410 29.630 0.00 0.00 0.00 1.40
3250 3680 5.465532 TTGTTTTGATTATGCAGCCTTCA 57.534 34.783 0.00 0.00 0.00 3.02
3259 3689 0.250467 TGCAGCCTTCACCAAGTCTC 60.250 55.000 0.00 0.00 0.00 3.36
3389 3822 3.706802 TCGCACATTGCTTTCTTTTCA 57.293 38.095 0.00 0.00 42.25 2.69
3554 3987 7.727331 TCCATTTTTGGAAAACAGCTAAATG 57.273 32.000 6.02 6.02 35.82 2.32
3577 4010 0.758734 TGATCCAGGGACTAATGCCG 59.241 55.000 0.00 0.00 42.42 5.69
3677 4110 4.353383 AGGTAAGTCCTGTTCAGTTTCC 57.647 45.455 0.00 0.00 46.19 3.13
3678 4111 3.072622 AGGTAAGTCCTGTTCAGTTTCCC 59.927 47.826 0.00 0.00 46.19 3.97
3710 4143 8.821686 TGTCCAATCAAATTCCATAAGTATGT 57.178 30.769 0.00 0.00 31.82 2.29
3711 4144 9.253832 TGTCCAATCAAATTCCATAAGTATGTT 57.746 29.630 0.00 0.00 31.82 2.71
3922 4357 7.345653 TGGAGTCACAGATGGTAATAATTCTCT 59.654 37.037 0.00 0.00 0.00 3.10
4001 4436 9.730705 CTTTAAGATTCTATGCTCATCCCATTA 57.269 33.333 0.00 0.00 0.00 1.90
4031 4466 6.363473 GTGTGTAAGTCTTTTGTCAGCATAC 58.637 40.000 0.00 0.00 0.00 2.39
4032 4467 6.018262 GTGTGTAAGTCTTTTGTCAGCATACA 60.018 38.462 0.00 0.00 0.00 2.29
4034 4469 7.017645 GTGTAAGTCTTTTGTCAGCATACATG 58.982 38.462 0.00 0.00 0.00 3.21
4058 4493 6.878923 TGTCAGTATCAACCATTTTAGGTCAG 59.121 38.462 0.00 0.00 42.25 3.51
4075 4510 4.532126 AGGTCAGTGACTACATGATCCAAA 59.468 41.667 22.18 0.00 32.47 3.28
4142 4578 4.207165 ACCAACTGTGCACATCTAAAGTT 58.793 39.130 22.00 16.45 0.00 2.66
4211 4647 8.770438 TCATTGCTGGGTAATTTTTCATTTAC 57.230 30.769 0.00 0.00 0.00 2.01
4214 4650 9.737844 ATTGCTGGGTAATTTTTCATTTACAAT 57.262 25.926 0.00 0.00 31.38 2.71
4388 4824 2.746362 GGTGAATGCAACTTCTGAGGAG 59.254 50.000 0.00 0.00 0.00 3.69
4430 4866 1.188219 TGGCCACAGTGAGGTCTCTC 61.188 60.000 12.62 0.00 40.36 3.20
4503 5103 9.727627 CCACTTATTTAGCAGATTCAGAATTTC 57.272 33.333 0.00 0.00 0.00 2.17
4668 5287 3.988459 GCGTTTGCGATAACATGGT 57.012 47.368 0.00 0.00 41.33 3.55
4689 5308 4.100498 GGTAGTTTATGAACCTCCATCCGA 59.900 45.833 0.00 0.00 36.39 4.55
4737 5356 1.839354 TGGCTGACAATGGCTCAGATA 59.161 47.619 5.73 0.00 37.90 1.98
4837 5456 3.118482 GGAGAGGATGCAATGAGAAGACA 60.118 47.826 0.00 0.00 0.00 3.41
4840 5460 3.607741 AGGATGCAATGAGAAGACAGTG 58.392 45.455 0.00 0.00 38.60 3.66
4845 5465 5.151297 TGCAATGAGAAGACAGTGTCATA 57.849 39.130 24.73 6.71 38.00 2.15
4884 5506 7.097834 GTGAAACTCTAGTTGTAGTAATGGCT 58.902 38.462 0.00 0.00 38.44 4.75
4968 5591 3.855255 TGTTTGTGATCCTTCCTGTGA 57.145 42.857 0.00 0.00 0.00 3.58
5021 5644 4.831107 AGCCTGTGTTTTTGTGAAATGTT 58.169 34.783 0.00 0.00 0.00 2.71
5075 5698 8.664798 TGAATGGACAACTAAATCTAACATTCG 58.335 33.333 0.00 0.00 42.56 3.34
5109 5732 3.922171 ACTCTGGAGAATTAAGGGCAG 57.078 47.619 4.49 0.00 0.00 4.85
5139 5762 5.713861 GCTATTCTGCCCTTGAATGGATTAT 59.286 40.000 0.00 0.00 35.36 1.28
5399 6025 5.685068 TGTGATGTAACTTTTCACAATTGCG 59.315 36.000 5.05 0.00 44.85 4.85
5673 6305 0.169672 GCATGTGTCGCAAAGCAGAT 59.830 50.000 8.74 0.00 33.94 2.90
5706 6338 1.650528 AGGAACTCCTGGGTCTTCAG 58.349 55.000 0.00 0.00 46.55 3.02
5752 6385 1.270732 ACAAGCCTCTTGCACTGAGAG 60.271 52.381 15.25 11.31 44.83 3.20
5760 6393 5.163774 GCCTCTTGCACTGAGAGATAAAAAG 60.164 44.000 14.28 0.00 42.57 2.27
5770 6403 8.728833 CACTGAGAGATAAAAAGAAAAGCAGAT 58.271 33.333 0.00 0.00 0.00 2.90
5795 6428 5.862323 TCGTGAGCAGAACAAAACTAGATAC 59.138 40.000 0.00 0.00 0.00 2.24
5797 6430 5.062308 GTGAGCAGAACAAAACTAGATACCG 59.938 44.000 0.00 0.00 0.00 4.02
5829 6462 7.817418 AACAAGAAACTAGATACCTTGCAAA 57.183 32.000 0.00 0.00 38.13 3.68
5830 6463 7.440523 ACAAGAAACTAGATACCTTGCAAAG 57.559 36.000 0.00 0.00 45.69 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.865365 GTGTTCTCTGCTATTCCTGTGTAC 59.135 45.833 0.00 0.00 0.00 2.90
1 2 4.526650 TGTGTTCTCTGCTATTCCTGTGTA 59.473 41.667 0.00 0.00 0.00 2.90
2 3 3.324846 TGTGTTCTCTGCTATTCCTGTGT 59.675 43.478 0.00 0.00 0.00 3.72
3 4 3.930336 TGTGTTCTCTGCTATTCCTGTG 58.070 45.455 0.00 0.00 0.00 3.66
4 5 4.623932 TTGTGTTCTCTGCTATTCCTGT 57.376 40.909 0.00 0.00 0.00 4.00
5 6 4.154918 GGTTTGTGTTCTCTGCTATTCCTG 59.845 45.833 0.00 0.00 0.00 3.86
6 7 4.042187 AGGTTTGTGTTCTCTGCTATTCCT 59.958 41.667 0.00 0.00 0.00 3.36
7 8 4.327680 AGGTTTGTGTTCTCTGCTATTCC 58.672 43.478 0.00 0.00 0.00 3.01
8 9 7.334421 TCATTAGGTTTGTGTTCTCTGCTATTC 59.666 37.037 0.00 0.00 0.00 1.75
9 10 7.168219 TCATTAGGTTTGTGTTCTCTGCTATT 58.832 34.615 0.00 0.00 0.00 1.73
10 11 6.711277 TCATTAGGTTTGTGTTCTCTGCTAT 58.289 36.000 0.00 0.00 0.00 2.97
11 12 6.109156 TCATTAGGTTTGTGTTCTCTGCTA 57.891 37.500 0.00 0.00 0.00 3.49
12 13 4.973168 TCATTAGGTTTGTGTTCTCTGCT 58.027 39.130 0.00 0.00 0.00 4.24
13 14 4.378874 GCTCATTAGGTTTGTGTTCTCTGC 60.379 45.833 0.00 0.00 0.00 4.26
14 15 4.999950 AGCTCATTAGGTTTGTGTTCTCTG 59.000 41.667 0.00 0.00 0.00 3.35
15 16 5.221722 TGAGCTCATTAGGTTTGTGTTCTCT 60.222 40.000 13.74 0.00 32.30 3.10
16 17 4.997395 TGAGCTCATTAGGTTTGTGTTCTC 59.003 41.667 13.74 0.00 32.30 2.87
17 18 4.973168 TGAGCTCATTAGGTTTGTGTTCT 58.027 39.130 13.74 0.00 32.30 3.01
18 19 5.689383 TTGAGCTCATTAGGTTTGTGTTC 57.311 39.130 19.04 0.00 32.30 3.18
19 20 4.022849 GCTTGAGCTCATTAGGTTTGTGTT 60.023 41.667 19.04 0.00 38.21 3.32
20 21 3.503748 GCTTGAGCTCATTAGGTTTGTGT 59.496 43.478 19.04 0.00 38.21 3.72
21 22 3.119708 GGCTTGAGCTCATTAGGTTTGTG 60.120 47.826 19.04 0.00 41.70 3.33
22 23 3.084786 GGCTTGAGCTCATTAGGTTTGT 58.915 45.455 19.04 0.00 41.70 2.83
23 24 3.350833 AGGCTTGAGCTCATTAGGTTTG 58.649 45.455 19.04 2.19 41.70 2.93
24 25 3.728385 AGGCTTGAGCTCATTAGGTTT 57.272 42.857 19.04 0.00 41.70 3.27
25 26 3.432890 GCTAGGCTTGAGCTCATTAGGTT 60.433 47.826 19.04 4.35 41.70 3.50
26 27 2.103941 GCTAGGCTTGAGCTCATTAGGT 59.896 50.000 19.04 4.35 41.70 3.08
27 28 2.103771 TGCTAGGCTTGAGCTCATTAGG 59.896 50.000 19.04 9.43 40.76 2.69
28 29 3.391965 CTGCTAGGCTTGAGCTCATTAG 58.608 50.000 19.04 14.21 40.76 1.73
29 30 2.484417 GCTGCTAGGCTTGAGCTCATTA 60.484 50.000 19.04 1.97 40.76 1.90
30 31 1.746516 GCTGCTAGGCTTGAGCTCATT 60.747 52.381 19.04 6.52 40.76 2.57
31 32 0.179051 GCTGCTAGGCTTGAGCTCAT 60.179 55.000 19.04 4.84 40.76 2.90
32 33 1.220206 GCTGCTAGGCTTGAGCTCA 59.780 57.895 13.74 13.74 40.76 4.26
33 34 0.179051 ATGCTGCTAGGCTTGAGCTC 60.179 55.000 6.82 6.82 40.76 4.09
34 35 0.464013 CATGCTGCTAGGCTTGAGCT 60.464 55.000 10.43 0.00 40.76 4.09
35 36 0.463295 TCATGCTGCTAGGCTTGAGC 60.463 55.000 2.23 2.23 40.03 4.26
36 37 3.774616 TCATGCTGCTAGGCTTGAG 57.225 52.632 0.00 0.00 40.03 3.02
37 38 1.138464 CTCTCATGCTGCTAGGCTTGA 59.862 52.381 0.00 8.56 41.73 3.02
38 39 1.138464 TCTCTCATGCTGCTAGGCTTG 59.862 52.381 0.00 0.00 38.28 4.01
39 40 1.413445 CTCTCTCATGCTGCTAGGCTT 59.587 52.381 0.00 0.00 0.00 4.35
40 41 1.042229 CTCTCTCATGCTGCTAGGCT 58.958 55.000 0.00 0.00 0.00 4.58
41 42 0.600782 GCTCTCTCATGCTGCTAGGC 60.601 60.000 0.00 0.00 0.00 3.93
42 43 0.751452 TGCTCTCTCATGCTGCTAGG 59.249 55.000 0.00 0.00 0.00 3.02
43 44 2.823924 ATGCTCTCTCATGCTGCTAG 57.176 50.000 0.00 0.00 0.00 3.42
44 45 4.886496 AATATGCTCTCTCATGCTGCTA 57.114 40.909 0.00 0.00 0.00 3.49
45 46 3.773418 AATATGCTCTCTCATGCTGCT 57.227 42.857 0.00 0.00 0.00 4.24
46 47 3.371591 GCTAATATGCTCTCTCATGCTGC 59.628 47.826 0.00 0.00 0.00 5.25
47 48 4.823157 AGCTAATATGCTCTCTCATGCTG 58.177 43.478 0.00 0.00 39.34 4.41
48 49 5.486735 AAGCTAATATGCTCTCTCATGCT 57.513 39.130 0.00 0.00 43.24 3.79
49 50 5.469421 ACAAAGCTAATATGCTCTCTCATGC 59.531 40.000 0.00 0.00 43.24 4.06
50 51 8.599055 TTACAAAGCTAATATGCTCTCTCATG 57.401 34.615 0.00 0.00 43.24 3.07
51 52 8.830201 CTTACAAAGCTAATATGCTCTCTCAT 57.170 34.615 0.00 0.00 43.24 2.90
68 69 7.315142 TCTGAATAAATTGCCTGCTTACAAAG 58.685 34.615 0.00 0.00 0.00 2.77
69 70 7.225784 TCTGAATAAATTGCCTGCTTACAAA 57.774 32.000 0.00 0.00 0.00 2.83
70 71 6.832520 TCTGAATAAATTGCCTGCTTACAA 57.167 33.333 0.00 0.00 0.00 2.41
71 72 6.832520 TTCTGAATAAATTGCCTGCTTACA 57.167 33.333 0.00 0.00 0.00 2.41
72 73 8.707938 AATTTCTGAATAAATTGCCTGCTTAC 57.292 30.769 0.00 0.00 37.60 2.34
74 75 9.895138 ATAAATTTCTGAATAAATTGCCTGCTT 57.105 25.926 0.00 0.00 38.68 3.91
75 76 9.538508 GATAAATTTCTGAATAAATTGCCTGCT 57.461 29.630 0.00 0.00 38.68 4.24
76 77 9.316730 TGATAAATTTCTGAATAAATTGCCTGC 57.683 29.630 0.00 0.00 38.68 4.85
96 97 9.405587 GCTGCTTACAACTTTGTTATTGATAAA 57.594 29.630 0.00 0.00 42.35 1.40
97 98 8.572185 TGCTGCTTACAACTTTGTTATTGATAA 58.428 29.630 0.00 0.00 42.35 1.75
98 99 8.105097 TGCTGCTTACAACTTTGTTATTGATA 57.895 30.769 0.00 0.00 42.35 2.15
99 100 6.980593 TGCTGCTTACAACTTTGTTATTGAT 58.019 32.000 0.00 0.00 42.35 2.57
100 101 6.039270 ACTGCTGCTTACAACTTTGTTATTGA 59.961 34.615 0.00 0.00 42.35 2.57
101 102 6.208644 ACTGCTGCTTACAACTTTGTTATTG 58.791 36.000 0.00 0.00 42.35 1.90
102 103 6.391227 ACTGCTGCTTACAACTTTGTTATT 57.609 33.333 0.00 0.00 42.35 1.40
103 104 6.263168 AGAACTGCTGCTTACAACTTTGTTAT 59.737 34.615 0.00 0.00 42.35 1.89
104 105 5.588648 AGAACTGCTGCTTACAACTTTGTTA 59.411 36.000 0.00 0.00 42.35 2.41
105 106 4.399303 AGAACTGCTGCTTACAACTTTGTT 59.601 37.500 0.00 0.00 42.35 2.83
106 107 3.947834 AGAACTGCTGCTTACAACTTTGT 59.052 39.130 0.00 0.00 44.86 2.83
107 108 4.558538 AGAACTGCTGCTTACAACTTTG 57.441 40.909 0.00 0.00 0.00 2.77
108 109 6.884280 AATAGAACTGCTGCTTACAACTTT 57.116 33.333 0.00 0.00 0.00 2.66
109 110 6.884280 AAATAGAACTGCTGCTTACAACTT 57.116 33.333 0.00 0.00 0.00 2.66
110 111 6.884280 AAAATAGAACTGCTGCTTACAACT 57.116 33.333 0.00 0.00 0.00 3.16
111 112 7.271438 GCTAAAAATAGAACTGCTGCTTACAAC 59.729 37.037 0.00 0.00 0.00 3.32
112 113 7.040755 TGCTAAAAATAGAACTGCTGCTTACAA 60.041 33.333 0.00 0.00 0.00 2.41
113 114 6.429692 TGCTAAAAATAGAACTGCTGCTTACA 59.570 34.615 0.00 0.00 0.00 2.41
114 115 6.842163 TGCTAAAAATAGAACTGCTGCTTAC 58.158 36.000 0.00 0.00 0.00 2.34
115 116 6.094048 CCTGCTAAAAATAGAACTGCTGCTTA 59.906 38.462 0.00 0.00 0.00 3.09
116 117 5.105997 CCTGCTAAAAATAGAACTGCTGCTT 60.106 40.000 0.00 0.00 0.00 3.91
117 118 4.397417 CCTGCTAAAAATAGAACTGCTGCT 59.603 41.667 0.00 0.00 0.00 4.24
118 119 4.396166 TCCTGCTAAAAATAGAACTGCTGC 59.604 41.667 0.00 0.00 0.00 5.25
119 120 6.372659 TCTTCCTGCTAAAAATAGAACTGCTG 59.627 38.462 0.00 0.00 0.00 4.41
120 121 6.476378 TCTTCCTGCTAAAAATAGAACTGCT 58.524 36.000 0.00 0.00 0.00 4.24
121 122 6.743575 TCTTCCTGCTAAAAATAGAACTGC 57.256 37.500 0.00 0.00 0.00 4.40
124 125 9.723447 GCTTATTCTTCCTGCTAAAAATAGAAC 57.277 33.333 0.00 0.00 0.00 3.01
125 126 8.612619 CGCTTATTCTTCCTGCTAAAAATAGAA 58.387 33.333 0.00 0.00 0.00 2.10
126 127 7.226720 CCGCTTATTCTTCCTGCTAAAAATAGA 59.773 37.037 0.00 0.00 0.00 1.98
127 128 7.226720 TCCGCTTATTCTTCCTGCTAAAAATAG 59.773 37.037 0.00 0.00 0.00 1.73
128 129 7.051623 TCCGCTTATTCTTCCTGCTAAAAATA 58.948 34.615 0.00 0.00 0.00 1.40
129 130 5.885912 TCCGCTTATTCTTCCTGCTAAAAAT 59.114 36.000 0.00 0.00 0.00 1.82
130 131 5.250200 TCCGCTTATTCTTCCTGCTAAAAA 58.750 37.500 0.00 0.00 0.00 1.94
131 132 4.839121 TCCGCTTATTCTTCCTGCTAAAA 58.161 39.130 0.00 0.00 0.00 1.52
132 133 4.481368 TCCGCTTATTCTTCCTGCTAAA 57.519 40.909 0.00 0.00 0.00 1.85
133 134 4.100963 TCATCCGCTTATTCTTCCTGCTAA 59.899 41.667 0.00 0.00 0.00 3.09
134 135 3.641436 TCATCCGCTTATTCTTCCTGCTA 59.359 43.478 0.00 0.00 0.00 3.49
135 136 2.435805 TCATCCGCTTATTCTTCCTGCT 59.564 45.455 0.00 0.00 0.00 4.24
136 137 2.545946 GTCATCCGCTTATTCTTCCTGC 59.454 50.000 0.00 0.00 0.00 4.85
137 138 3.134458 GGTCATCCGCTTATTCTTCCTG 58.866 50.000 0.00 0.00 0.00 3.86
138 139 2.771943 TGGTCATCCGCTTATTCTTCCT 59.228 45.455 0.00 0.00 36.30 3.36
139 140 3.194005 TGGTCATCCGCTTATTCTTCC 57.806 47.619 0.00 0.00 36.30 3.46
140 141 3.561725 CCTTGGTCATCCGCTTATTCTTC 59.438 47.826 0.00 0.00 36.30 2.87
141 142 3.054361 ACCTTGGTCATCCGCTTATTCTT 60.054 43.478 0.00 0.00 36.30 2.52
142 143 2.505819 ACCTTGGTCATCCGCTTATTCT 59.494 45.455 0.00 0.00 36.30 2.40
143 144 2.614057 CACCTTGGTCATCCGCTTATTC 59.386 50.000 0.00 0.00 36.30 1.75
144 145 2.643551 CACCTTGGTCATCCGCTTATT 58.356 47.619 0.00 0.00 36.30 1.40
145 146 1.134098 CCACCTTGGTCATCCGCTTAT 60.134 52.381 0.00 0.00 36.30 1.73
146 147 0.251916 CCACCTTGGTCATCCGCTTA 59.748 55.000 0.00 0.00 36.30 3.09
147 148 1.002134 CCACCTTGGTCATCCGCTT 60.002 57.895 0.00 0.00 36.30 4.68
148 149 2.671070 CCACCTTGGTCATCCGCT 59.329 61.111 0.00 0.00 36.30 5.52
149 150 2.438434 CCCACCTTGGTCATCCGC 60.438 66.667 0.00 0.00 35.17 5.54
150 151 1.377202 CACCCACCTTGGTCATCCG 60.377 63.158 0.00 0.00 36.12 4.18
151 152 0.404040 TTCACCCACCTTGGTCATCC 59.596 55.000 0.00 0.00 36.12 3.51
152 153 2.286365 TTTCACCCACCTTGGTCATC 57.714 50.000 0.00 0.00 36.12 2.92
153 154 2.899256 CAATTTCACCCACCTTGGTCAT 59.101 45.455 0.00 0.00 36.12 3.06
154 155 2.315176 CAATTTCACCCACCTTGGTCA 58.685 47.619 0.00 0.00 36.12 4.02
155 156 2.316108 ACAATTTCACCCACCTTGGTC 58.684 47.619 0.00 0.00 36.12 4.02
156 157 2.470057 ACAATTTCACCCACCTTGGT 57.530 45.000 0.00 0.00 39.96 3.67
157 158 4.081697 GGATAACAATTTCACCCACCTTGG 60.082 45.833 0.00 0.00 37.25 3.61
158 159 4.526262 TGGATAACAATTTCACCCACCTTG 59.474 41.667 0.00 0.00 0.00 3.61
159 160 4.746466 TGGATAACAATTTCACCCACCTT 58.254 39.130 0.00 0.00 0.00 3.50
160 161 4.396357 TGGATAACAATTTCACCCACCT 57.604 40.909 0.00 0.00 0.00 4.00
161 162 4.709397 TCATGGATAACAATTTCACCCACC 59.291 41.667 0.00 0.00 0.00 4.61
162 163 5.913137 TCATGGATAACAATTTCACCCAC 57.087 39.130 0.00 0.00 0.00 4.61
163 164 7.581814 TCTATCATGGATAACAATTTCACCCA 58.418 34.615 0.00 0.00 0.00 4.51
164 165 8.463930 TTCTATCATGGATAACAATTTCACCC 57.536 34.615 0.00 0.00 0.00 4.61
165 166 9.736023 GTTTCTATCATGGATAACAATTTCACC 57.264 33.333 0.00 0.00 0.00 4.02
177 178 9.865321 CAAGTTTTTCATGTTTCTATCATGGAT 57.135 29.630 6.15 0.00 41.79 3.41
178 179 7.814107 GCAAGTTTTTCATGTTTCTATCATGGA 59.186 33.333 6.15 0.00 41.79 3.41
179 180 7.816031 AGCAAGTTTTTCATGTTTCTATCATGG 59.184 33.333 6.15 0.00 41.79 3.66
180 181 8.752766 AGCAAGTTTTTCATGTTTCTATCATG 57.247 30.769 0.00 0.00 42.53 3.07
186 187 9.468532 GAGATTAAGCAAGTTTTTCATGTTTCT 57.531 29.630 0.00 0.00 0.00 2.52
187 188 9.468532 AGAGATTAAGCAAGTTTTTCATGTTTC 57.531 29.630 0.00 0.00 0.00 2.78
188 189 9.822185 AAGAGATTAAGCAAGTTTTTCATGTTT 57.178 25.926 0.00 0.00 0.00 2.83
189 190 9.252962 CAAGAGATTAAGCAAGTTTTTCATGTT 57.747 29.630 0.00 0.00 0.00 2.71
190 191 8.632679 TCAAGAGATTAAGCAAGTTTTTCATGT 58.367 29.630 0.00 0.00 0.00 3.21
191 192 9.467258 TTCAAGAGATTAAGCAAGTTTTTCATG 57.533 29.630 0.00 0.00 0.00 3.07
197 198 8.734386 CCACTATTCAAGAGATTAAGCAAGTTT 58.266 33.333 0.00 0.00 0.00 2.66
198 199 7.885399 ACCACTATTCAAGAGATTAAGCAAGTT 59.115 33.333 0.00 0.00 0.00 2.66
199 200 7.398024 ACCACTATTCAAGAGATTAAGCAAGT 58.602 34.615 0.00 0.00 0.00 3.16
200 201 7.856145 ACCACTATTCAAGAGATTAAGCAAG 57.144 36.000 0.00 0.00 0.00 4.01
201 202 8.514594 CAAACCACTATTCAAGAGATTAAGCAA 58.485 33.333 0.00 0.00 0.00 3.91
202 203 7.882791 TCAAACCACTATTCAAGAGATTAAGCA 59.117 33.333 0.00 0.00 0.00 3.91
203 204 8.178313 GTCAAACCACTATTCAAGAGATTAAGC 58.822 37.037 0.00 0.00 0.00 3.09
204 205 9.442047 AGTCAAACCACTATTCAAGAGATTAAG 57.558 33.333 0.00 0.00 0.00 1.85
207 208 9.220767 GTTAGTCAAACCACTATTCAAGAGATT 57.779 33.333 0.00 0.00 31.38 2.40
208 209 8.375506 TGTTAGTCAAACCACTATTCAAGAGAT 58.624 33.333 0.00 0.00 37.27 2.75
209 210 7.732025 TGTTAGTCAAACCACTATTCAAGAGA 58.268 34.615 0.00 0.00 37.27 3.10
210 211 7.962964 TGTTAGTCAAACCACTATTCAAGAG 57.037 36.000 0.00 0.00 37.27 2.85
211 212 8.154203 TCATGTTAGTCAAACCACTATTCAAGA 58.846 33.333 0.00 0.00 37.27 3.02
212 213 8.322906 TCATGTTAGTCAAACCACTATTCAAG 57.677 34.615 0.00 0.00 37.27 3.02
213 214 7.936847 ACTCATGTTAGTCAAACCACTATTCAA 59.063 33.333 0.00 0.00 37.27 2.69
214 215 7.450074 ACTCATGTTAGTCAAACCACTATTCA 58.550 34.615 0.00 0.00 37.27 2.57
215 216 7.907214 ACTCATGTTAGTCAAACCACTATTC 57.093 36.000 0.00 0.00 37.27 1.75
216 217 8.594550 AGTACTCATGTTAGTCAAACCACTATT 58.405 33.333 0.00 0.00 37.27 1.73
217 218 8.135382 AGTACTCATGTTAGTCAAACCACTAT 57.865 34.615 0.00 0.00 37.27 2.12
218 219 7.534723 AGTACTCATGTTAGTCAAACCACTA 57.465 36.000 0.00 0.00 37.27 2.74
219 220 6.420913 AGTACTCATGTTAGTCAAACCACT 57.579 37.500 0.00 0.00 37.27 4.00
220 221 8.597662 TTTAGTACTCATGTTAGTCAAACCAC 57.402 34.615 0.00 0.00 37.27 4.16
221 222 9.616156 TTTTTAGTACTCATGTTAGTCAAACCA 57.384 29.630 0.00 0.00 37.27 3.67
231 232 9.944376 TCTGCTATTCTTTTTAGTACTCATGTT 57.056 29.630 0.00 0.00 0.00 2.71
237 238 8.678199 GCCAAATCTGCTATTCTTTTTAGTACT 58.322 33.333 0.00 0.00 0.00 2.73
238 239 7.915923 GGCCAAATCTGCTATTCTTTTTAGTAC 59.084 37.037 0.00 0.00 0.00 2.73
239 240 7.068226 GGGCCAAATCTGCTATTCTTTTTAGTA 59.932 37.037 4.39 0.00 0.00 1.82
240 241 6.127338 GGGCCAAATCTGCTATTCTTTTTAGT 60.127 38.462 4.39 0.00 0.00 2.24
241 242 6.127366 TGGGCCAAATCTGCTATTCTTTTTAG 60.127 38.462 2.13 0.00 0.00 1.85
242 243 5.719085 TGGGCCAAATCTGCTATTCTTTTTA 59.281 36.000 2.13 0.00 0.00 1.52
243 244 4.531732 TGGGCCAAATCTGCTATTCTTTTT 59.468 37.500 2.13 0.00 0.00 1.94
244 245 4.095946 TGGGCCAAATCTGCTATTCTTTT 58.904 39.130 2.13 0.00 0.00 2.27
245 246 3.711863 TGGGCCAAATCTGCTATTCTTT 58.288 40.909 2.13 0.00 0.00 2.52
246 247 3.386932 TGGGCCAAATCTGCTATTCTT 57.613 42.857 2.13 0.00 0.00 2.52
247 248 3.386932 TTGGGCCAAATCTGCTATTCT 57.613 42.857 18.51 0.00 0.00 2.40
248 249 4.677673 AATTGGGCCAAATCTGCTATTC 57.322 40.909 24.97 0.00 0.00 1.75
249 250 4.384427 CCAAATTGGGCCAAATCTGCTATT 60.384 41.667 24.97 7.39 32.67 1.73
250 251 3.135167 CCAAATTGGGCCAAATCTGCTAT 59.865 43.478 24.97 0.04 32.67 2.97
251 252 2.500910 CCAAATTGGGCCAAATCTGCTA 59.499 45.455 24.97 0.00 32.67 3.49
252 253 1.279846 CCAAATTGGGCCAAATCTGCT 59.720 47.619 24.97 1.80 32.67 4.24
253 254 1.003464 ACCAAATTGGGCCAAATCTGC 59.997 47.619 24.97 0.00 43.37 4.26
254 255 2.038820 ACACCAAATTGGGCCAAATCTG 59.961 45.455 24.97 18.97 43.37 2.90
255 256 2.337849 ACACCAAATTGGGCCAAATCT 58.662 42.857 24.97 8.10 43.37 2.40
256 257 2.857186 ACACCAAATTGGGCCAAATC 57.143 45.000 24.97 0.00 43.37 2.17
257 258 3.117738 TCAAACACCAAATTGGGCCAAAT 60.118 39.130 24.97 13.01 43.37 2.32
258 259 2.239654 TCAAACACCAAATTGGGCCAAA 59.760 40.909 24.97 0.00 43.37 3.28
259 260 1.839994 TCAAACACCAAATTGGGCCAA 59.160 42.857 23.33 23.33 43.37 4.52
260 261 1.139853 GTCAAACACCAAATTGGGCCA 59.860 47.619 17.27 0.00 43.37 5.36
261 262 1.542328 GGTCAAACACCAAATTGGGCC 60.542 52.381 17.27 0.00 45.98 5.80
262 263 1.877637 GGTCAAACACCAAATTGGGC 58.122 50.000 17.27 0.00 45.98 5.36
272 273 9.744468 ACTTTTGTTATATTTCAGGTCAAACAC 57.256 29.630 0.00 0.00 0.00 3.32
273 274 9.743057 CACTTTTGTTATATTTCAGGTCAAACA 57.257 29.630 0.00 0.00 0.00 2.83
274 275 9.959749 TCACTTTTGTTATATTTCAGGTCAAAC 57.040 29.630 0.00 0.00 0.00 2.93
277 278 8.739039 CCATCACTTTTGTTATATTTCAGGTCA 58.261 33.333 0.00 0.00 0.00 4.02
278 279 8.956426 TCCATCACTTTTGTTATATTTCAGGTC 58.044 33.333 0.00 0.00 0.00 3.85
279 280 8.877864 TCCATCACTTTTGTTATATTTCAGGT 57.122 30.769 0.00 0.00 0.00 4.00
280 281 9.740239 CATCCATCACTTTTGTTATATTTCAGG 57.260 33.333 0.00 0.00 0.00 3.86
286 287 9.685276 TCAACTCATCCATCACTTTTGTTATAT 57.315 29.630 0.00 0.00 0.00 0.86
287 288 9.513906 TTCAACTCATCCATCACTTTTGTTATA 57.486 29.630 0.00 0.00 0.00 0.98
288 289 8.408043 TTCAACTCATCCATCACTTTTGTTAT 57.592 30.769 0.00 0.00 0.00 1.89
289 290 7.719193 TCTTCAACTCATCCATCACTTTTGTTA 59.281 33.333 0.00 0.00 0.00 2.41
290 291 6.547141 TCTTCAACTCATCCATCACTTTTGTT 59.453 34.615 0.00 0.00 0.00 2.83
291 292 6.064060 TCTTCAACTCATCCATCACTTTTGT 58.936 36.000 0.00 0.00 0.00 2.83
292 293 6.564709 TCTTCAACTCATCCATCACTTTTG 57.435 37.500 0.00 0.00 0.00 2.44
293 294 7.587037 TTTCTTCAACTCATCCATCACTTTT 57.413 32.000 0.00 0.00 0.00 2.27
294 295 7.232127 ACATTTCTTCAACTCATCCATCACTTT 59.768 33.333 0.00 0.00 0.00 2.66
295 296 6.718454 ACATTTCTTCAACTCATCCATCACTT 59.282 34.615 0.00 0.00 0.00 3.16
296 297 6.243900 ACATTTCTTCAACTCATCCATCACT 58.756 36.000 0.00 0.00 0.00 3.41
297 298 6.149973 TGACATTTCTTCAACTCATCCATCAC 59.850 38.462 0.00 0.00 0.00 3.06
298 299 6.240145 TGACATTTCTTCAACTCATCCATCA 58.760 36.000 0.00 0.00 0.00 3.07
299 300 6.748333 TGACATTTCTTCAACTCATCCATC 57.252 37.500 0.00 0.00 0.00 3.51
300 301 6.405508 GCATGACATTTCTTCAACTCATCCAT 60.406 38.462 0.00 0.00 0.00 3.41
301 302 5.106038 GCATGACATTTCTTCAACTCATCCA 60.106 40.000 0.00 0.00 0.00 3.41
302 303 5.338365 GCATGACATTTCTTCAACTCATCC 58.662 41.667 0.00 0.00 0.00 3.51
303 304 5.106038 TGGCATGACATTTCTTCAACTCATC 60.106 40.000 0.00 0.00 0.00 2.92
304 305 4.768448 TGGCATGACATTTCTTCAACTCAT 59.232 37.500 0.00 0.00 0.00 2.90
305 306 4.143543 TGGCATGACATTTCTTCAACTCA 58.856 39.130 0.00 0.00 0.00 3.41
306 307 4.771590 TGGCATGACATTTCTTCAACTC 57.228 40.909 0.00 0.00 0.00 3.01
307 308 5.014858 AGATGGCATGACATTTCTTCAACT 58.985 37.500 17.03 2.08 0.00 3.16
320 321 7.838884 TCAATTTGATACAAAAGATGGCATGA 58.161 30.769 3.81 0.00 0.00 3.07
406 407 6.233434 TCGCAGGATAAGAAGCATAATCAAT 58.767 36.000 0.00 0.00 0.00 2.57
407 408 5.610398 TCGCAGGATAAGAAGCATAATCAA 58.390 37.500 0.00 0.00 0.00 2.57
427 428 3.003480 GCTTCCCACCATCTATTATCGC 58.997 50.000 0.00 0.00 0.00 4.58
500 818 8.935844 TCAGTAGCATAGTTAACATTTGTCTTG 58.064 33.333 8.61 0.00 0.00 3.02
519 838 7.172361 AGAGAAAAGAAACAAGATGTCAGTAGC 59.828 37.037 0.00 0.00 0.00 3.58
572 891 6.644248 ACACTAACATTTTTGTTACCCCTC 57.356 37.500 0.00 0.00 33.59 4.30
604 928 1.364269 ACATTTCGGTTACCCCCTCA 58.636 50.000 0.00 0.00 0.00 3.86
606 930 2.914941 ACTAACATTTCGGTTACCCCCT 59.085 45.455 0.00 0.00 32.29 4.79
608 932 5.710513 AAAACTAACATTTCGGTTACCCC 57.289 39.130 0.00 0.00 32.29 4.95
630 954 8.005976 ACTAACATTTCTGTTACCCCCTAAAAA 58.994 33.333 0.00 0.00 43.77 1.94
631 955 7.528675 ACTAACATTTCTGTTACCCCCTAAAA 58.471 34.615 0.00 0.00 43.77 1.52
632 956 7.093965 ACTAACATTTCTGTTACCCCCTAAA 57.906 36.000 0.00 0.00 43.77 1.85
633 957 6.707273 ACTAACATTTCTGTTACCCCCTAA 57.293 37.500 0.00 0.00 43.77 2.69
634 958 6.961721 ACTACTAACATTTCTGTTACCCCCTA 59.038 38.462 0.00 0.00 43.77 3.53
635 959 5.789054 ACTACTAACATTTCTGTTACCCCCT 59.211 40.000 0.00 0.00 43.77 4.79
636 960 6.058553 ACTACTAACATTTCTGTTACCCCC 57.941 41.667 0.00 0.00 43.77 5.40
637 961 9.506018 TTTTACTACTAACATTTCTGTTACCCC 57.494 33.333 0.00 0.00 43.77 4.95
665 989 4.396166 CCCATCTGGTTCATGTACAAGTTC 59.604 45.833 0.00 0.00 0.00 3.01
667 991 3.873801 GCCCATCTGGTTCATGTACAAGT 60.874 47.826 0.00 0.00 36.04 3.16
668 992 2.684881 GCCCATCTGGTTCATGTACAAG 59.315 50.000 0.00 2.60 36.04 3.16
670 994 1.064758 GGCCCATCTGGTTCATGTACA 60.065 52.381 0.00 0.00 36.04 2.90
727 1051 3.260483 GCATCAGGACTGCGAGCG 61.260 66.667 0.00 0.00 0.00 5.03
728 1052 2.125391 TGCATCAGGACTGCGAGC 60.125 61.111 0.00 0.00 42.62 5.03
749 1073 0.394938 TGCCGTGGTACAAGTGATGT 59.605 50.000 0.00 0.00 44.16 3.06
755 1079 2.609244 CCCAATTTTGCCGTGGTACAAG 60.609 50.000 0.00 0.00 44.16 3.16
757 1081 0.962489 CCCAATTTTGCCGTGGTACA 59.038 50.000 0.00 0.00 0.00 2.90
1194 1546 2.910688 AAAGCCAAGAACAGAGACGA 57.089 45.000 0.00 0.00 0.00 4.20
1226 1578 3.449377 TGGATAACCTAATCTCGTGCACA 59.551 43.478 18.64 3.15 37.04 4.57
1280 1644 7.381323 TCTGTAACATGATAGCCTGATACATG 58.619 38.462 0.00 0.00 42.37 3.21
1285 1649 9.664332 GATTAATCTGTAACATGATAGCCTGAT 57.336 33.333 8.27 0.00 0.00 2.90
1302 1666 3.692257 AGGATGAGGCCGATTAATCTG 57.308 47.619 13.45 8.11 0.00 2.90
1342 1710 9.261180 CGGACTGTGTACATAAGATTATCAAAT 57.739 33.333 13.71 0.00 0.00 2.32
1374 1742 2.188062 TACCCCCTTTTTACAGTGCG 57.812 50.000 0.00 0.00 0.00 5.34
1386 1754 5.742562 TTTGATACCAATCATTACCCCCT 57.257 39.130 0.00 0.00 41.73 4.79
1452 1827 0.106419 TTCCCCCACCATAAATCCGC 60.106 55.000 0.00 0.00 0.00 5.54
1464 1839 5.166407 ACAAAAATAAATCCCTTTCCCCCA 58.834 37.500 0.00 0.00 0.00 4.96
1552 1933 4.537015 GCAACACACAGTGTAAGAAATCC 58.463 43.478 5.69 0.00 46.79 3.01
1566 1947 0.755327 ACCTGGAAAGGGCAACACAC 60.755 55.000 0.00 0.00 39.74 3.82
1567 1948 0.032615 AACCTGGAAAGGGCAACACA 60.033 50.000 0.00 0.00 39.74 3.72
1604 1986 4.199310 TGGGTTTGATCAATCCGAGATTC 58.801 43.478 23.23 12.54 32.31 2.52
1702 2084 2.398252 ATGTCAGCAGAGTCATGTGG 57.602 50.000 0.00 0.00 0.00 4.17
1703 2088 3.371285 CAGAATGTCAGCAGAGTCATGTG 59.629 47.826 0.00 0.00 0.00 3.21
1719 2104 1.401931 CCAAAGCTTGACGGCAGAATG 60.402 52.381 0.00 0.00 40.87 2.67
1722 2107 2.260869 GCCAAAGCTTGACGGCAGA 61.261 57.895 23.19 0.00 44.25 4.26
1737 2122 1.979855 TGCAAAAGAAGCAGTAGCCA 58.020 45.000 0.00 0.00 43.56 4.75
1752 2138 6.035368 ACAATGTTTTATACAGGCATGCAA 57.965 33.333 21.36 0.14 40.83 4.08
1756 2142 7.665690 TCACAAACAATGTTTTATACAGGCAT 58.334 30.769 8.85 0.00 41.46 4.40
1758 2144 7.116233 CCTTCACAAACAATGTTTTATACAGGC 59.884 37.037 8.85 0.00 41.46 4.85
1885 2271 4.081309 GGGAAGTAGTAACATACAGGCACA 60.081 45.833 0.00 0.00 0.00 4.57
1904 2290 0.383949 GAAAACAAGTGCGCAGGGAA 59.616 50.000 12.22 0.00 0.00 3.97
1911 2297 9.649024 AAAATTGATAAAATGAAAACAAGTGCG 57.351 25.926 0.00 0.00 0.00 5.34
1933 2323 7.039504 AGCCAATCACACAATGAACTCTAAAAT 60.040 33.333 0.00 0.00 41.93 1.82
1936 2326 5.181811 CAGCCAATCACACAATGAACTCTAA 59.818 40.000 0.00 0.00 41.93 2.10
1941 2331 2.297033 ACCAGCCAATCACACAATGAAC 59.703 45.455 0.00 0.00 41.93 3.18
1945 2336 1.203038 TCCACCAGCCAATCACACAAT 60.203 47.619 0.00 0.00 0.00 2.71
1950 2341 1.106285 GGATTCCACCAGCCAATCAC 58.894 55.000 0.00 0.00 0.00 3.06
1951 2342 0.703488 TGGATTCCACCAGCCAATCA 59.297 50.000 0.00 0.00 34.77 2.57
1953 2348 1.572415 AGATGGATTCCACCAGCCAAT 59.428 47.619 7.76 0.00 46.05 3.16
1968 2363 2.163010 GCCAATCACACAGTCAAGATGG 59.837 50.000 0.00 0.00 0.00 3.51
1971 2366 2.936919 AGCCAATCACACAGTCAAGA 57.063 45.000 0.00 0.00 0.00 3.02
1974 2369 2.936919 AGAAGCCAATCACACAGTCA 57.063 45.000 0.00 0.00 0.00 3.41
1977 2372 3.057736 CCTGAAAGAAGCCAATCACACAG 60.058 47.826 0.00 0.00 34.07 3.66
1978 2373 2.886523 CCTGAAAGAAGCCAATCACACA 59.113 45.455 0.00 0.00 34.07 3.72
1981 2376 2.352127 GCACCTGAAAGAAGCCAATCAC 60.352 50.000 0.00 0.00 34.07 3.06
2028 2424 2.285668 TCAGGCCCAGGGGAAGAG 60.286 66.667 7.91 0.00 37.50 2.85
2173 2570 3.558321 GCCAATGGTAGTTACTGGACACA 60.558 47.826 0.00 0.00 0.00 3.72
2222 2620 2.754552 CTCTCGCCATTTCCATTTTCCA 59.245 45.455 0.00 0.00 0.00 3.53
2223 2621 2.755103 ACTCTCGCCATTTCCATTTTCC 59.245 45.455 0.00 0.00 0.00 3.13
2293 2703 2.719426 AAGCTCAAGCATGAAGTTGC 57.281 45.000 4.59 0.00 45.16 4.17
2294 2704 3.973657 ACAAAGCTCAAGCATGAAGTTG 58.026 40.909 12.83 0.80 45.16 3.16
2295 2705 4.660789 AACAAAGCTCAAGCATGAAGTT 57.339 36.364 12.83 4.40 45.16 2.66
2296 2706 5.972107 ATAACAAAGCTCAAGCATGAAGT 57.028 34.783 12.83 0.00 45.16 3.01
2297 2707 6.309737 GGAAATAACAAAGCTCAAGCATGAAG 59.690 38.462 12.83 0.00 45.16 3.02
2298 2708 6.158598 GGAAATAACAAAGCTCAAGCATGAA 58.841 36.000 12.83 3.65 45.16 2.57
2299 2709 5.336690 GGGAAATAACAAAGCTCAAGCATGA 60.337 40.000 12.83 0.00 45.16 3.07
2300 2710 4.866486 GGGAAATAACAAAGCTCAAGCATG 59.134 41.667 4.59 5.62 45.16 4.06
2301 2711 4.081476 GGGGAAATAACAAAGCTCAAGCAT 60.081 41.667 4.59 0.00 45.16 3.79
2302 2712 3.258123 GGGGAAATAACAAAGCTCAAGCA 59.742 43.478 4.59 0.00 45.16 3.91
2303 2713 3.258123 TGGGGAAATAACAAAGCTCAAGC 59.742 43.478 0.00 0.00 42.49 4.01
2304 2714 5.665916 ATGGGGAAATAACAAAGCTCAAG 57.334 39.130 0.00 0.00 0.00 3.02
2305 2715 6.894654 TCATATGGGGAAATAACAAAGCTCAA 59.105 34.615 2.13 0.00 0.00 3.02
2306 2716 6.430864 TCATATGGGGAAATAACAAAGCTCA 58.569 36.000 2.13 0.00 0.00 4.26
2307 2717 6.959639 TCATATGGGGAAATAACAAAGCTC 57.040 37.500 2.13 0.00 0.00 4.09
2316 2726 9.456147 CACGGTAAATTATCATATGGGGAAATA 57.544 33.333 2.13 0.00 0.00 1.40
2328 2738 9.093970 CAGAAACAGATACACGGTAAATTATCA 57.906 33.333 0.00 0.00 0.00 2.15
2335 2755 4.877378 ACCAGAAACAGATACACGGTAA 57.123 40.909 0.00 0.00 0.00 2.85
2338 2758 4.062293 TCAAACCAGAAACAGATACACGG 58.938 43.478 0.00 0.00 0.00 4.94
2339 2759 5.236478 ACTTCAAACCAGAAACAGATACACG 59.764 40.000 0.00 0.00 0.00 4.49
2476 2899 6.417258 TGACTTCAGATTAGCATGAAATGGA 58.583 36.000 0.00 0.00 46.86 3.41
2493 2916 7.775093 CCAAACCCTTCATTCTATATGACTTCA 59.225 37.037 0.00 0.00 0.00 3.02
2813 3237 2.868583 CCCTATGAACTCAGCAACATCG 59.131 50.000 0.00 0.00 0.00 3.84
3022 3446 5.705905 ACCTATGCAAACAGTTTTAGAGGTC 59.294 40.000 15.82 0.00 0.00 3.85
3105 3535 0.836606 TTCACCTCAACAGCAGGACA 59.163 50.000 0.00 0.00 34.75 4.02
3106 3536 2.191128 ATTCACCTCAACAGCAGGAC 57.809 50.000 0.00 0.00 34.75 3.85
3130 3560 6.681368 GCAAGTCCATTTCTGAGTTCAAAGTT 60.681 38.462 0.00 0.00 0.00 2.66
3133 3563 4.889409 AGCAAGTCCATTTCTGAGTTCAAA 59.111 37.500 0.00 0.00 0.00 2.69
3141 3571 4.326504 AAAACCAGCAAGTCCATTTCTG 57.673 40.909 0.00 0.00 0.00 3.02
3143 3573 4.038642 TGGTAAAACCAGCAAGTCCATTTC 59.961 41.667 0.00 0.00 44.79 2.17
3162 3592 5.295787 GCACGAGGAAATGAATTACATGGTA 59.704 40.000 0.00 0.00 39.39 3.25
3167 3597 8.902540 ATATTAGCACGAGGAAATGAATTACA 57.097 30.769 0.00 0.00 0.00 2.41
3169 3599 9.990360 TGTATATTAGCACGAGGAAATGAATTA 57.010 29.630 0.00 0.00 0.00 1.40
3170 3600 8.774586 GTGTATATTAGCACGAGGAAATGAATT 58.225 33.333 0.00 0.00 0.00 2.17
3183 3613 7.210174 TGGTCAAGAGATGTGTATATTAGCAC 58.790 38.462 0.00 0.00 36.26 4.40
3185 3615 8.715998 CAATGGTCAAGAGATGTGTATATTAGC 58.284 37.037 0.00 0.00 0.00 3.09
3186 3616 8.715998 GCAATGGTCAAGAGATGTGTATATTAG 58.284 37.037 0.00 0.00 0.00 1.73
3190 3620 6.239217 AGCAATGGTCAAGAGATGTGTATA 57.761 37.500 0.00 0.00 0.00 1.47
3196 3626 6.971184 GTCAATAAAGCAATGGTCAAGAGATG 59.029 38.462 0.00 0.00 0.00 2.90
3198 3628 6.003326 TGTCAATAAAGCAATGGTCAAGAGA 58.997 36.000 0.00 0.00 0.00 3.10
3219 3649 9.693157 GCTGCATAATCAAAACAAAAATATGTC 57.307 29.630 0.00 0.00 31.81 3.06
3220 3650 8.667463 GGCTGCATAATCAAAACAAAAATATGT 58.333 29.630 0.50 0.00 34.24 2.29
3221 3651 8.885722 AGGCTGCATAATCAAAACAAAAATATG 58.114 29.630 0.50 0.00 0.00 1.78
3222 3652 9.452287 AAGGCTGCATAATCAAAACAAAAATAT 57.548 25.926 0.50 0.00 0.00 1.28
3223 3653 8.845413 AAGGCTGCATAATCAAAACAAAAATA 57.155 26.923 0.50 0.00 0.00 1.40
3224 3654 7.444792 TGAAGGCTGCATAATCAAAACAAAAAT 59.555 29.630 0.50 0.00 0.00 1.82
3225 3655 6.765036 TGAAGGCTGCATAATCAAAACAAAAA 59.235 30.769 0.50 0.00 0.00 1.94
3226 3656 6.202570 GTGAAGGCTGCATAATCAAAACAAAA 59.797 34.615 0.00 0.00 0.00 2.44
3227 3657 5.695816 GTGAAGGCTGCATAATCAAAACAAA 59.304 36.000 0.00 0.00 0.00 2.83
3230 3660 4.176271 GGTGAAGGCTGCATAATCAAAAC 58.824 43.478 0.00 0.00 0.00 2.43
3235 3665 3.019564 ACTTGGTGAAGGCTGCATAATC 58.980 45.455 0.00 0.00 32.95 1.75
3238 3668 1.630369 AGACTTGGTGAAGGCTGCATA 59.370 47.619 0.00 0.00 46.72 3.14
3250 3680 3.308473 GGATGCCTTTTAGGAGACTTGGT 60.308 47.826 0.00 0.00 43.67 3.67
3259 3689 1.338020 GATTGCCGGATGCCTTTTAGG 59.662 52.381 5.05 0.00 40.16 2.69
3284 3714 5.590530 AATACCAGAGTGAGATGTGAGAC 57.409 43.478 0.00 0.00 0.00 3.36
3554 3987 2.620585 GCATTAGTCCCTGGATCAAAGC 59.379 50.000 0.00 0.00 0.00 3.51
3577 4010 6.341316 TGACAGAGGAATAGCTTGTGAATAC 58.659 40.000 0.00 0.00 0.00 1.89
3677 4110 6.054295 TGGAATTTGATTGGACAAACAAAGG 58.946 36.000 20.00 0.00 43.12 3.11
3678 4111 7.733402 ATGGAATTTGATTGGACAAACAAAG 57.267 32.000 20.00 0.00 43.12 2.77
3710 4143 7.415086 TCCCAATAAAGGCAAGGAGTTATTAA 58.585 34.615 0.00 0.00 0.00 1.40
3711 4144 6.975949 TCCCAATAAAGGCAAGGAGTTATTA 58.024 36.000 0.00 0.00 0.00 0.98
3712 4145 5.837829 TCCCAATAAAGGCAAGGAGTTATT 58.162 37.500 0.00 0.00 0.00 1.40
3713 4146 5.449553 CTCCCAATAAAGGCAAGGAGTTAT 58.550 41.667 0.00 0.00 36.87 1.89
3977 4412 9.104713 TCTAATGGGATGAGCATAGAATCTTAA 57.895 33.333 0.00 0.00 0.00 1.85
3978 4413 8.670521 TCTAATGGGATGAGCATAGAATCTTA 57.329 34.615 0.00 0.00 0.00 2.10
4001 4436 5.099042 ACAAAAGACTTACACACCACTCT 57.901 39.130 0.00 0.00 0.00 3.24
4031 4466 7.336679 TGACCTAAAATGGTTGATACTGACATG 59.663 37.037 0.00 0.00 41.00 3.21
4032 4467 7.402054 TGACCTAAAATGGTTGATACTGACAT 58.598 34.615 0.00 0.00 41.00 3.06
4034 4469 6.879458 ACTGACCTAAAATGGTTGATACTGAC 59.121 38.462 0.00 0.00 41.00 3.51
4058 4493 6.801539 TTCACTTTTGGATCATGTAGTCAC 57.198 37.500 0.00 0.00 0.00 3.67
4128 4564 8.892723 CCATCACTAATTAACTTTAGATGTGCA 58.107 33.333 3.40 0.00 34.08 4.57
4142 4578 9.276590 CTTGAAGTATCATGCCATCACTAATTA 57.723 33.333 0.00 0.00 34.96 1.40
4211 4647 8.188139 ACCTGTAAGTACAACAGACAAAAATTG 58.812 33.333 22.96 10.20 45.89 2.32
4214 4650 7.390996 TCAACCTGTAAGTACAACAGACAAAAA 59.609 33.333 22.96 6.87 45.89 1.94
4466 4902 5.903010 TGCTAAATAAGTGGAGTGAGGGATA 59.097 40.000 0.00 0.00 0.00 2.59
4474 4915 7.187824 TCTGAATCTGCTAAATAAGTGGAGT 57.812 36.000 0.00 0.00 0.00 3.85
4509 5109 8.076178 GAGCAAACTCAGTACATGTTTAAACAT 58.924 33.333 24.88 24.88 45.14 2.71
4668 5287 4.960469 AGTCGGATGGAGGTTCATAAACTA 59.040 41.667 0.00 0.00 35.61 2.24
4809 5428 3.878103 CTCATTGCATCCTCTCCTTTCTG 59.122 47.826 0.00 0.00 0.00 3.02
4837 5456 4.226427 ACATCCATGTGCTTATGACACT 57.774 40.909 2.84 0.00 40.03 3.55
4884 5506 7.112122 AGAAGGAAATATACACATCACAGCAA 58.888 34.615 0.00 0.00 0.00 3.91
5075 5698 3.438183 TCCAGAGTTGGGAGTAACTACC 58.562 50.000 0.00 0.00 45.10 3.18
5109 5732 0.394899 AAGGGCAGAATAGCACCAGC 60.395 55.000 0.00 0.00 39.23 4.85
5218 5841 6.780522 AGATTGGGTTGTTAACATACTTGGTT 59.219 34.615 9.56 0.00 0.00 3.67
5267 5893 7.675161 ATTTTTATTGGGAAGGTAATCCTGG 57.325 36.000 0.00 0.00 44.35 4.45
5463 6089 4.898320 TCTGCTCTCTGAAGTTTATGCAA 58.102 39.130 0.00 0.00 0.00 4.08
5673 6305 0.313043 GTTCCTTGAGACGACGGACA 59.687 55.000 0.00 0.00 0.00 4.02
5706 6338 3.118629 TGACTACATCCCACTGATTCTGC 60.119 47.826 0.00 0.00 0.00 4.26
5752 6385 7.007815 GCTCACGAATCTGCTTTTCTTTTTATC 59.992 37.037 0.00 0.00 0.00 1.75
5760 6393 2.738846 TCTGCTCACGAATCTGCTTTTC 59.261 45.455 0.00 0.00 0.00 2.29
5770 6403 4.689071 TCTAGTTTTGTTCTGCTCACGAA 58.311 39.130 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.