Multiple sequence alignment - TraesCS3A01G094300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G094300 chr3A 100.000 2941 0 0 1 2941 60296466 60299406 0.000000e+00 5432.0
1 TraesCS3A01G094300 chr3A 77.551 147 28 5 1157 1300 476385475 476385619 1.880000e-12 84.2
2 TraesCS3A01G094300 chr3A 89.552 67 6 1 1157 1222 479481827 479481761 1.880000e-12 84.2
3 TraesCS3A01G094300 chr3B 88.956 2807 198 45 1 2740 75734528 75737289 0.000000e+00 3363.0
4 TraesCS3A01G094300 chr3B 77.551 147 28 5 1157 1300 458343136 458343280 1.880000e-12 84.2
5 TraesCS3A01G094300 chr3D 88.721 1720 102 44 1300 2941 48071006 48072711 0.000000e+00 2017.0
6 TraesCS3A01G094300 chr3D 92.652 1320 59 18 4 1303 48069610 48070911 0.000000e+00 1866.0
7 TraesCS3A01G094300 chr3D 89.552 67 6 1 1157 1222 360048892 360048826 1.880000e-12 84.2
8 TraesCS3A01G094300 chr4D 77.824 239 37 13 1060 1290 497126074 497126304 1.840000e-27 134.0
9 TraesCS3A01G094300 chr4B 77.824 239 37 13 1060 1290 637621816 637622046 1.840000e-27 134.0
10 TraesCS3A01G094300 chr5A 80.447 179 25 8 1117 1290 676886992 676887165 8.560000e-26 128.0
11 TraesCS3A01G094300 chr5D 76.230 244 30 22 1062 1291 130188037 130188266 1.440000e-18 104.0
12 TraesCS3A01G094300 chr6D 100.000 29 0 0 1062 1090 309341541 309341569 1.000000e-03 54.7
13 TraesCS3A01G094300 chr6B 100.000 29 0 0 1062 1090 476841206 476841234 1.000000e-03 54.7
14 TraesCS3A01G094300 chr2A 96.875 32 1 0 1062 1093 613175733 613175702 1.000000e-03 54.7
15 TraesCS3A01G094300 chr6A 100.000 28 0 0 1062 1089 446091951 446091978 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G094300 chr3A 60296466 60299406 2940 False 5432.0 5432 100.0000 1 2941 1 chr3A.!!$F1 2940
1 TraesCS3A01G094300 chr3B 75734528 75737289 2761 False 3363.0 3363 88.9560 1 2740 1 chr3B.!!$F1 2739
2 TraesCS3A01G094300 chr3D 48069610 48072711 3101 False 1941.5 2017 90.6865 4 2941 2 chr3D.!!$F1 2937

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
410 418 0.249699 TGTCCAGTGCACAGTAACCG 60.25 55.0 21.04 0.0 0.00 4.44 F
971 1026 1.320344 ATCGACGCAGGAGTAGCCAA 61.32 55.0 0.00 0.0 40.02 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1263 1318 0.250234 TGCCGAGTGATTTCTGGAGG 59.750 55.0 0.0 0.0 0.0 4.30 R
2791 3057 0.036858 GAAGGCGGAAGAGAGTTGCT 60.037 55.0 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 102 3.297472 GCTTAAGCTTTTCAACCACGAC 58.703 45.455 20.38 0.00 38.21 4.34
173 179 8.053963 ACATACTCTAGTTGAAAGTAGCTAGGA 58.946 37.037 0.00 0.00 33.74 2.94
258 266 4.208746 TGATGACCTTTATGCATGCATGA 58.791 39.130 37.43 29.35 37.82 3.07
320 328 2.699954 CTCTCATTGGTTGTACGCCTT 58.300 47.619 7.64 0.00 0.00 4.35
410 418 0.249699 TGTCCAGTGCACAGTAACCG 60.250 55.000 21.04 0.00 0.00 4.44
473 485 6.128138 AGCTGACAAAAAGATACCTACCTT 57.872 37.500 0.00 0.00 0.00 3.50
530 554 8.021898 TCTGTGACTATGATCATTCATTGGTA 57.978 34.615 14.65 0.00 42.61 3.25
531 555 8.146412 TCTGTGACTATGATCATTCATTGGTAG 58.854 37.037 14.65 4.93 42.61 3.18
532 556 7.795047 TGTGACTATGATCATTCATTGGTAGT 58.205 34.615 14.65 8.34 42.61 2.73
559 585 1.826340 ATTTCCTTTTGGTGGCCGGC 61.826 55.000 21.18 21.18 41.38 6.13
599 626 4.215613 GTCAAGGGTGCTTTAGTTTCGAAT 59.784 41.667 0.00 0.00 0.00 3.34
607 634 6.745907 GGTGCTTTAGTTTCGAATGGTTAATC 59.254 38.462 0.00 0.00 0.00 1.75
622 649 4.038642 TGGTTAATCACAAACTTTCCAGCC 59.961 41.667 0.00 0.00 0.00 4.85
632 659 4.486125 AACTTTCCAGCCACACAAATTT 57.514 36.364 0.00 0.00 0.00 1.82
683 717 2.706555 GCACATGCATGATGGAGATG 57.293 50.000 32.75 18.70 41.59 2.90
695 729 4.835678 TGATGGAGATGCGCATATACATT 58.164 39.130 36.03 23.12 33.98 2.71
697 731 6.585416 TGATGGAGATGCGCATATACATTAT 58.415 36.000 36.03 20.86 33.98 1.28
844 880 6.710295 TGTACAGATGTATCACCATATTTGGC 59.290 38.462 1.57 0.00 38.51 4.52
846 882 7.307989 GTACAGATGTATCACCATATTTGGCAC 60.308 40.741 1.57 0.00 38.51 5.01
896 932 6.997655 TCCTATAAATGTAGTGCAGATCCAG 58.002 40.000 0.00 0.00 0.00 3.86
918 954 5.182950 CAGTCACCACATAATTAAGCACCAA 59.817 40.000 0.00 0.00 0.00 3.67
971 1026 1.320344 ATCGACGCAGGAGTAGCCAA 61.320 55.000 0.00 0.00 40.02 4.52
972 1027 1.517257 CGACGCAGGAGTAGCCAAG 60.517 63.158 0.00 0.00 40.02 3.61
1023 1078 4.760047 GAGAAGCCGGCGAGCCAA 62.760 66.667 23.20 0.00 35.37 4.52
1242 1297 2.586792 GAGCCCATCTCCAAGCGT 59.413 61.111 0.00 0.00 35.77 5.07
1357 1518 8.697846 TTGTAGAACATTTAGAATCGATCGTT 57.302 30.769 15.94 8.77 0.00 3.85
1359 1520 8.188799 TGTAGAACATTTAGAATCGATCGTTCT 58.811 33.333 25.37 25.37 43.05 3.01
1370 1531 2.159282 TCGATCGTTCTGGAGGCTAAAC 60.159 50.000 15.94 0.00 0.00 2.01
1397 1558 6.260714 TCCATGAAATTTGTATCAGATGGTCG 59.739 38.462 0.00 0.00 30.94 4.79
1408 1569 4.221422 ATGGTCGGTGATCGCGGG 62.221 66.667 6.13 0.00 39.05 6.13
1479 1640 3.036429 ATCAGGAAGCGCCAGACCC 62.036 63.158 2.29 0.00 40.02 4.46
1725 1898 0.663568 CGAGTCGACAACCACTCACC 60.664 60.000 19.50 0.00 39.29 4.02
1758 1931 4.015578 GCTCAGAGAGCGATGCTG 57.984 61.111 0.00 0.00 45.85 4.41
1759 1932 2.239124 GCTCAGAGAGCGATGCTGC 61.239 63.158 0.00 0.00 45.85 5.25
1805 1978 4.222847 GACGATGGTCGGGAGGGC 62.223 72.222 4.28 0.00 45.59 5.19
1959 2146 8.497554 CGAATTGATTGATTTGGTTGTTGATTT 58.502 29.630 0.00 0.00 0.00 2.17
2107 2294 2.431419 TCGAGTGGTAATTAATGGCCGA 59.569 45.455 0.00 0.00 0.00 5.54
2210 2401 9.909043 AAAAATGTTGTTTTTGTTATAGTTCGC 57.091 25.926 0.00 0.00 31.17 4.70
2279 2471 6.437477 AGTTTCCCAAGAAAAGGATATTCCAC 59.563 38.462 0.00 0.00 43.48 4.02
2359 2559 8.927675 TGTAAATTTATGAAGTAGTGGTGGTT 57.072 30.769 0.31 0.00 0.00 3.67
2377 2577 5.042463 TGGTTTCGCCATTGGATTCTATA 57.958 39.130 6.95 0.00 43.61 1.31
2429 2639 1.740585 TGGTGTTGTGTGGAACTTTCG 59.259 47.619 0.00 0.00 38.04 3.46
2453 2663 5.565455 TGAGCCATGGATATATTGTGACA 57.435 39.130 18.40 0.00 0.00 3.58
2460 2670 6.402875 CCATGGATATATTGTGACATGCGAAG 60.403 42.308 5.56 0.00 35.58 3.79
2518 2728 1.288335 ACTCCGGATCCCTAACTGAGT 59.712 52.381 3.57 6.08 0.00 3.41
2536 2746 3.403624 GACCATGAGTCAGGCCCA 58.596 61.111 0.00 0.00 45.55 5.36
2616 2827 1.461559 CGAAGACTCGGGGTACTTCT 58.538 55.000 13.99 0.00 41.57 2.85
2627 2838 1.519408 GGTACTTCTGCGGCTTCAAA 58.481 50.000 0.00 0.00 0.00 2.69
2646 2857 0.469892 AGCAACAAAGGGGAAGGGTG 60.470 55.000 0.00 0.00 0.00 4.61
2648 2859 1.039856 CAACAAAGGGGAAGGGTGTG 58.960 55.000 0.00 0.00 0.00 3.82
2721 2987 9.562583 TTGAAGTAATACAATGTTTTTATCCGC 57.437 29.630 0.00 0.00 0.00 5.54
2763 3029 9.114952 TGAGTTGAGTAATACAATGTGTTTTCA 57.885 29.630 0.00 3.61 0.00 2.69
2806 3072 1.003108 GCTAAGCAACTCTCTTCCGC 58.997 55.000 0.00 0.00 0.00 5.54
2807 3073 1.646189 CTAAGCAACTCTCTTCCGCC 58.354 55.000 0.00 0.00 0.00 6.13
2819 3085 2.168521 CTCTTCCGCCTTCAACATCCTA 59.831 50.000 0.00 0.00 0.00 2.94
2821 3087 2.910688 TCCGCCTTCAACATCCTATC 57.089 50.000 0.00 0.00 0.00 2.08
2833 3099 9.186323 CTTCAACATCCTATCTTAATAGTGTCG 57.814 37.037 0.00 0.00 34.20 4.35
2840 3106 3.814005 TCTTAATAGTGTCGCTTCCCC 57.186 47.619 0.00 0.00 0.00 4.81
2854 3120 3.005791 CGCTTCCCCAAGACTTGAAATTT 59.994 43.478 16.99 0.00 0.00 1.82
2858 3124 6.295292 GCTTCCCCAAGACTTGAAATTTACAT 60.295 38.462 16.99 0.00 0.00 2.29
2860 3126 6.991938 TCCCCAAGACTTGAAATTTACATTG 58.008 36.000 16.99 0.00 0.00 2.82
2920 3191 7.112452 TCTCTTCTTTTCCTTTTCCTTTTGG 57.888 36.000 0.00 0.00 42.21 3.28
2935 3206 1.243902 TTTGGGGTCACAAATCTCGC 58.756 50.000 0.00 0.00 35.57 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.721797 CGATTTGAGCGAACCAAAGACG 60.722 50.000 0.00 0.00 37.00 4.18
27 28 2.882742 AGCTTTCGATTTGAGCGAAC 57.117 45.000 0.11 0.00 46.08 3.95
97 102 4.083537 ACGTGCCGCATTTATACATTATGG 60.084 41.667 0.00 0.00 0.00 2.74
173 179 5.339990 CAAAAGATTTTGGTCAAGTCACGT 58.660 37.500 9.68 0.00 42.81 4.49
258 266 0.712380 AAATCAAGGATGGGCCAGGT 59.288 50.000 13.78 0.00 40.02 4.00
310 318 6.759827 GGAAGAGACAAATATAAGGCGTACAA 59.240 38.462 0.00 0.00 0.00 2.41
410 418 1.405105 TGAGTGCTGACCAGTTTTTGC 59.595 47.619 0.00 0.00 0.00 3.68
530 554 6.605995 GCCACCAAAAGGAAATATAACCTACT 59.394 38.462 0.00 0.00 35.25 2.57
531 555 6.183360 GGCCACCAAAAGGAAATATAACCTAC 60.183 42.308 0.00 0.00 35.25 3.18
532 556 5.894964 GGCCACCAAAAGGAAATATAACCTA 59.105 40.000 0.00 0.00 35.25 3.08
559 585 1.813178 TGACAGTGACTCGCTTCCTAG 59.187 52.381 0.00 0.00 0.00 3.02
568 594 0.394565 AGCACCCTTGACAGTGACTC 59.605 55.000 0.00 0.00 36.01 3.36
574 600 3.058914 CGAAACTAAAGCACCCTTGACAG 60.059 47.826 0.00 0.00 0.00 3.51
599 626 4.038642 GGCTGGAAAGTTTGTGATTAACCA 59.961 41.667 0.00 0.00 0.00 3.67
607 634 1.476085 TGTGTGGCTGGAAAGTTTGTG 59.524 47.619 0.00 0.00 0.00 3.33
622 649 7.042858 TGCACTAAAAGCATGTAAATTTGTGTG 60.043 33.333 0.00 12.93 37.02 3.82
683 717 6.195244 GCATGTGCTTAATAATGTATATGCGC 59.805 38.462 0.00 0.00 35.00 6.09
685 719 9.016623 CATGCATGTGCTTAATAATGTATATGC 57.983 33.333 18.91 0.00 41.15 3.14
721 757 3.564225 GGCATCCATCCTAAAAGTTACGG 59.436 47.826 0.00 0.00 0.00 4.02
722 758 3.564225 GGGCATCCATCCTAAAAGTTACG 59.436 47.826 0.00 0.00 0.00 3.18
844 880 2.107950 TGCTATTGGACCTTTCCGTG 57.892 50.000 0.00 0.00 46.37 4.94
846 882 4.935808 GGTATATGCTATTGGACCTTTCCG 59.064 45.833 0.00 0.00 46.37 4.30
896 932 5.183140 AGTTGGTGCTTAATTATGTGGTGAC 59.817 40.000 0.84 0.00 0.00 3.67
918 954 5.361285 AGCTAGCTAGTGTACTAATTGCAGT 59.639 40.000 17.69 0.00 0.00 4.40
923 959 7.648039 AGTTCAGCTAGCTAGTGTACTAATT 57.352 36.000 18.86 5.17 0.00 1.40
1242 1297 2.956132 GAGATGATGGTCTCCTCCTCA 58.044 52.381 0.00 0.00 38.94 3.86
1263 1318 0.250234 TGCCGAGTGATTTCTGGAGG 59.750 55.000 0.00 0.00 0.00 4.30
1319 1472 8.986477 AAATGTTCTACAATCAATTACCAAGC 57.014 30.769 0.00 0.00 0.00 4.01
1345 1506 1.067821 GCCTCCAGAACGATCGATTCT 59.932 52.381 24.34 21.69 36.85 2.40
1347 1508 1.115467 AGCCTCCAGAACGATCGATT 58.885 50.000 24.34 12.31 0.00 3.34
1357 1518 3.181329 TCATGGAAGTTTAGCCTCCAGA 58.819 45.455 0.00 0.00 33.63 3.86
1359 1520 4.380843 TTTCATGGAAGTTTAGCCTCCA 57.619 40.909 0.00 0.00 34.72 3.86
1370 1531 8.004087 ACCATCTGATACAAATTTCATGGAAG 57.996 34.615 0.00 0.00 30.17 3.46
1391 1552 4.221422 CCCGCGATCACCGACCAT 62.221 66.667 8.23 0.00 41.76 3.55
1397 1558 1.595382 CATCTTCCCCGCGATCACC 60.595 63.158 8.23 0.00 0.00 4.02
1408 1569 2.768344 TCCTCCCCGGCATCTTCC 60.768 66.667 0.00 0.00 0.00 3.46
1436 1597 4.322801 CGGGAGTTCCAGTAGTTCTTGATT 60.323 45.833 0.00 0.00 37.91 2.57
1576 1740 1.025113 GCTGCTAACCGGTTCCTTCC 61.025 60.000 26.16 9.23 0.00 3.46
1641 1805 2.669569 AAGCTGGCACGCGAACAT 60.670 55.556 15.93 0.00 33.54 2.71
1793 1966 2.041430 TAATGGCCCTCCCGACCA 59.959 61.111 0.00 0.00 37.99 4.02
1805 1978 1.066605 ACGGCGCAGTAGTAGTAATGG 59.933 52.381 12.68 0.00 0.00 3.16
2200 2391 7.978982 AGAGTTACTTTAGTCGCGAACTATAA 58.021 34.615 12.06 5.28 40.18 0.98
2201 2392 7.545362 AGAGTTACTTTAGTCGCGAACTATA 57.455 36.000 12.06 9.22 40.18 1.31
2210 2401 9.931210 ATTTGTTTCAAAGAGTTACTTTAGTCG 57.069 29.630 0.00 0.00 45.66 4.18
2348 2548 4.783667 TGGCGAAACCACCACTAC 57.216 55.556 0.00 0.00 46.36 2.73
2359 2559 7.062749 ACTAGTTATAGAATCCAATGGCGAA 57.937 36.000 0.00 0.00 32.93 4.70
2407 2617 3.181491 CGAAAGTTCCACACAACACCAAT 60.181 43.478 0.00 0.00 0.00 3.16
2408 2618 2.162608 CGAAAGTTCCACACAACACCAA 59.837 45.455 0.00 0.00 0.00 3.67
2410 2620 2.011222 TCGAAAGTTCCACACAACACC 58.989 47.619 0.00 0.00 0.00 4.16
2429 2639 6.175471 TGTCACAATATATCCATGGCTCATC 58.825 40.000 6.96 0.00 0.00 2.92
2453 2663 3.306973 CACAACGACATATCACTTCGCAT 59.693 43.478 0.00 0.00 36.18 4.73
2460 2670 5.609088 GTGTCTTTCACAACGACATATCAC 58.391 41.667 0.00 0.00 45.51 3.06
2536 2746 2.119495 AGATTATCCGGTGGTTGCTCT 58.881 47.619 0.00 0.00 0.00 4.09
2611 2822 1.952263 GCTTTGAAGCCGCAGAAGT 59.048 52.632 4.38 0.00 46.20 3.01
2627 2838 0.469892 CACCCTTCCCCTTTGTTGCT 60.470 55.000 0.00 0.00 0.00 3.91
2633 2844 1.388217 TCCCACACCCTTCCCCTTT 60.388 57.895 0.00 0.00 0.00 3.11
2646 2857 2.031870 AGCCAAAACTCAAACTCCCAC 58.968 47.619 0.00 0.00 0.00 4.61
2648 2859 3.819564 AAAGCCAAAACTCAAACTCCC 57.180 42.857 0.00 0.00 0.00 4.30
2699 2965 9.915629 TTTTGCGGATAAAAACATTGTATTACT 57.084 25.926 0.00 0.00 0.00 2.24
2738 3004 9.382244 GTGAAAACACATTGTATTACTCAACTC 57.618 33.333 0.00 0.00 0.00 3.01
2739 3005 8.349983 GGTGAAAACACATTGTATTACTCAACT 58.650 33.333 0.00 0.00 0.00 3.16
2741 3007 7.285629 TGGGTGAAAACACATTGTATTACTCAA 59.714 33.333 0.00 0.00 0.00 3.02
2742 3008 6.773200 TGGGTGAAAACACATTGTATTACTCA 59.227 34.615 0.00 0.00 0.00 3.41
2744 3010 6.547880 TGTGGGTGAAAACACATTGTATTACT 59.452 34.615 0.00 0.00 42.20 2.24
2745 3011 6.740110 TGTGGGTGAAAACACATTGTATTAC 58.260 36.000 0.00 0.00 42.20 1.89
2746 3012 6.961360 TGTGGGTGAAAACACATTGTATTA 57.039 33.333 0.00 0.00 42.20 0.98
2747 3013 5.860941 TGTGGGTGAAAACACATTGTATT 57.139 34.783 0.00 0.00 42.20 1.89
2749 3015 5.661056 TTTGTGGGTGAAAACACATTGTA 57.339 34.783 0.00 0.00 45.90 2.41
2751 3017 5.869753 TTTTTGTGGGTGAAAACACATTG 57.130 34.783 0.00 0.00 45.90 2.82
2770 3036 6.969366 TGCTTAGCGCACATCATATATTTTT 58.031 32.000 11.47 0.00 45.47 1.94
2771 3037 6.558771 TGCTTAGCGCACATCATATATTTT 57.441 33.333 11.47 0.00 45.47 1.82
2785 3051 1.003108 GGAAGAGAGTTGCTTAGCGC 58.997 55.000 0.00 0.00 39.77 5.92
2786 3052 1.272781 CGGAAGAGAGTTGCTTAGCG 58.727 55.000 0.00 0.00 0.00 4.26
2787 3053 1.003108 GCGGAAGAGAGTTGCTTAGC 58.997 55.000 0.00 0.00 0.00 3.09
2788 3054 1.205893 AGGCGGAAGAGAGTTGCTTAG 59.794 52.381 0.00 0.00 0.00 2.18
2789 3055 1.267121 AGGCGGAAGAGAGTTGCTTA 58.733 50.000 0.00 0.00 0.00 3.09
2790 3056 0.398318 AAGGCGGAAGAGAGTTGCTT 59.602 50.000 0.00 0.00 0.00 3.91
2791 3057 0.036858 GAAGGCGGAAGAGAGTTGCT 60.037 55.000 0.00 0.00 0.00 3.91
2792 3058 0.320771 TGAAGGCGGAAGAGAGTTGC 60.321 55.000 0.00 0.00 0.00 4.17
2796 3062 2.275318 GATGTTGAAGGCGGAAGAGAG 58.725 52.381 0.00 0.00 0.00 3.20
2806 3072 9.482627 GACACTATTAAGATAGGATGTTGAAGG 57.517 37.037 0.00 0.00 39.68 3.46
2807 3073 9.186323 CGACACTATTAAGATAGGATGTTGAAG 57.814 37.037 0.00 0.00 39.68 3.02
2819 3085 3.709653 TGGGGAAGCGACACTATTAAGAT 59.290 43.478 0.00 0.00 0.00 2.40
2821 3087 3.536956 TGGGGAAGCGACACTATTAAG 57.463 47.619 0.00 0.00 0.00 1.85
2833 3099 4.607293 AAATTTCAAGTCTTGGGGAAGC 57.393 40.909 12.66 0.00 0.00 3.86
2873 3139 4.040217 AGCTGTCTTGTCTGTCAATTCTCT 59.960 41.667 0.00 0.00 35.35 3.10
2880 3146 2.591923 AGAGAGCTGTCTTGTCTGTCA 58.408 47.619 7.74 0.00 30.97 3.58
2885 3151 4.450757 GGAAAAGAAGAGAGCTGTCTTGTC 59.549 45.833 29.07 16.53 36.89 3.18
2920 3191 1.079405 TCCGCGAGATTTGTGACCC 60.079 57.895 8.23 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.