Multiple sequence alignment - TraesCS3A01G092300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G092300 chr3A 100.000 5438 0 0 1 5438 57948749 57943312 0.000000e+00 10043.0
1 TraesCS3A01G092300 chr3D 94.649 4635 134 38 504 5049 46579918 46584527 0.000000e+00 7081.0
2 TraesCS3A01G092300 chr3D 93.103 406 18 6 1 406 46579008 46579403 2.180000e-163 586.0
3 TraesCS3A01G092300 chr3D 82.060 563 71 19 2669 3226 605469322 605468785 2.310000e-123 453.0
4 TraesCS3A01G092300 chr3D 100.000 28 0 0 479 506 46579468 46579495 1.000000e-02 52.8
5 TraesCS3A01G092300 chr3B 94.237 4616 161 38 504 5036 72949779 72954372 0.000000e+00 6953.0
6 TraesCS3A01G092300 chr3B 80.381 525 77 17 2705 3226 814631040 814631541 5.140000e-100 375.0
7 TraesCS3A01G092300 chr3B 79.328 387 17 20 1 386 72948919 72949243 4.270000e-51 213.0
8 TraesCS3A01G092300 chr3B 97.778 45 1 0 5150 5194 72954367 72954411 1.620000e-10 78.7
9 TraesCS3A01G092300 chr3B 100.000 28 0 0 479 506 72949336 72949363 1.000000e-02 52.8
10 TraesCS3A01G092300 chr1A 83.133 2834 431 37 1047 3863 117244619 117247422 0.000000e+00 2542.0
11 TraesCS3A01G092300 chr1A 89.489 352 37 0 3958 4309 117247523 117247874 3.860000e-121 446.0
12 TraesCS3A01G092300 chr1A 87.455 279 27 3 2765 3038 535204684 535204959 1.140000e-81 315.0
13 TraesCS3A01G092300 chr1A 92.000 75 6 0 2669 2743 535204621 535204695 7.450000e-19 106.0
14 TraesCS3A01G092300 chr1D 82.656 2831 454 29 1045 3863 111089329 111092134 0.000000e+00 2473.0
15 TraesCS3A01G092300 chr1D 89.489 352 37 0 3958 4309 111092238 111092589 3.860000e-121 446.0
16 TraesCS3A01G092300 chr1D 82.839 472 51 12 2765 3226 438833794 438834245 3.950000e-106 396.0
17 TraesCS3A01G092300 chr1D 92.000 75 6 0 2669 2743 438833731 438833805 7.450000e-19 106.0
18 TraesCS3A01G092300 chr1D 85.227 88 12 1 1143 1230 87893643 87893729 7.500000e-14 89.8
19 TraesCS3A01G092300 chr1D 100.000 32 0 0 1490 1521 5518593 5518624 5.880000e-05 60.2
20 TraesCS3A01G092300 chr1B 82.563 2833 453 32 1045 3863 169693862 169696667 0.000000e+00 2457.0
21 TraesCS3A01G092300 chr1B 88.920 352 39 0 3958 4309 169696772 169697123 8.370000e-118 435.0
22 TraesCS3A01G092300 chr1B 92.000 75 6 0 2669 2743 594691627 594691701 7.450000e-19 106.0
23 TraesCS3A01G092300 chr6B 81.376 1294 215 19 2320 3606 11954594 11955868 0.000000e+00 1031.0
24 TraesCS3A01G092300 chr2A 88.060 268 30 2 1508 1774 20670386 20670652 3.160000e-82 316.0
25 TraesCS3A01G092300 chr2A 83.810 315 33 12 2801 3111 20671106 20671406 3.210000e-72 283.0
26 TraesCS3A01G092300 chr7A 72.100 1043 227 57 1079 2089 206910807 206911817 6.990000e-64 255.0
27 TraesCS3A01G092300 chr7A 76.308 325 60 13 3955 4270 206913627 206913943 2.030000e-34 158.0
28 TraesCS3A01G092300 chr7D 71.935 1044 225 63 1080 2089 197610786 197611795 5.440000e-60 243.0
29 TraesCS3A01G092300 chr7B 71.126 1039 242 55 1080 2089 161776629 161777638 2.570000e-48 204.0
30 TraesCS3A01G092300 chr7B 76.615 325 59 14 3955 4270 161779452 161779768 4.360000e-36 163.0
31 TraesCS3A01G092300 chr7B 88.462 130 15 0 1436 1565 698889300 698889429 2.030000e-34 158.0
32 TraesCS3A01G092300 chr7B 83.654 104 17 0 1126 1229 698888970 698889073 1.250000e-16 99.0
33 TraesCS3A01G092300 chr5B 83.770 191 31 0 1492 1682 644452058 644451868 1.200000e-41 182.0
34 TraesCS3A01G092300 chr5B 80.000 145 21 8 3960 4100 436259126 436259266 3.470000e-17 100.0
35 TraesCS3A01G092300 chrUn 88.462 130 15 0 1436 1565 87691277 87691406 2.030000e-34 158.0
36 TraesCS3A01G092300 chr6D 82.895 152 26 0 2251 2402 16852427 16852578 2.640000e-28 137.0
37 TraesCS3A01G092300 chr6D 87.778 90 11 0 1141 1230 22066636 22066547 7.450000e-19 106.0
38 TraesCS3A01G092300 chr6D 93.103 58 4 0 3141 3198 16853084 16853141 9.700000e-13 86.1
39 TraesCS3A01G092300 chr5A 79.452 146 20 10 3960 4100 470196262 470196402 1.610000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G092300 chr3A 57943312 57948749 5437 True 10043.000000 10043 100.000000 1 5438 1 chr3A.!!$R1 5437
1 TraesCS3A01G092300 chr3D 46579008 46584527 5519 False 2573.266667 7081 95.917333 1 5049 3 chr3D.!!$F1 5048
2 TraesCS3A01G092300 chr3D 605468785 605469322 537 True 453.000000 453 82.060000 2669 3226 1 chr3D.!!$R1 557
3 TraesCS3A01G092300 chr3B 72948919 72954411 5492 False 1824.375000 6953 92.835750 1 5194 4 chr3B.!!$F2 5193
4 TraesCS3A01G092300 chr3B 814631040 814631541 501 False 375.000000 375 80.381000 2705 3226 1 chr3B.!!$F1 521
5 TraesCS3A01G092300 chr1A 117244619 117247874 3255 False 1494.000000 2542 86.311000 1047 4309 2 chr1A.!!$F1 3262
6 TraesCS3A01G092300 chr1D 111089329 111092589 3260 False 1459.500000 2473 86.072500 1045 4309 2 chr1D.!!$F3 3264
7 TraesCS3A01G092300 chr1D 438833731 438834245 514 False 251.000000 396 87.419500 2669 3226 2 chr1D.!!$F4 557
8 TraesCS3A01G092300 chr1B 169693862 169697123 3261 False 1446.000000 2457 85.741500 1045 4309 2 chr1B.!!$F2 3264
9 TraesCS3A01G092300 chr6B 11954594 11955868 1274 False 1031.000000 1031 81.376000 2320 3606 1 chr6B.!!$F1 1286
10 TraesCS3A01G092300 chr2A 20670386 20671406 1020 False 299.500000 316 85.935000 1508 3111 2 chr2A.!!$F1 1603
11 TraesCS3A01G092300 chr7A 206910807 206913943 3136 False 206.500000 255 74.204000 1079 4270 2 chr7A.!!$F1 3191
12 TraesCS3A01G092300 chr7D 197610786 197611795 1009 False 243.000000 243 71.935000 1080 2089 1 chr7D.!!$F1 1009

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
657 1117 0.107214 TTGGATTGCTCCGTCCATCC 60.107 55.000 0.00 0.0 45.37 3.51 F
686 1147 0.253327 ACCCCTGCCGATCTCTTTTC 59.747 55.000 0.00 0.0 0.00 2.29 F
1245 1762 0.388134 GCGTCACGGAGCTGAGTTTA 60.388 55.000 0.00 0.0 0.00 2.01 F
2115 2721 0.685097 GCACCAACCTCACAGACCTA 59.315 55.000 0.00 0.0 0.00 3.08 F
3114 4095 2.028484 GACGCCAGTGACCGTGAA 59.972 61.111 12.45 0.0 37.87 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2115 2721 1.040646 TCTGGTTGTTGTCGAGCTCT 58.959 50.000 12.85 0.00 0.00 4.09 R
2442 3192 2.768492 GCCAAGCTTGCCGATCTGG 61.768 63.158 21.43 6.69 42.50 3.86 R
3243 4252 2.266055 GCGTCCTTGTCCTCCTGG 59.734 66.667 0.00 0.00 0.00 4.45 R
3891 4985 2.102757 TGACAGCAAAAGTACGGTGGTA 59.897 45.455 0.00 0.00 34.96 3.25 R
4865 6025 0.730265 TAAACATGATTGCCCGTCGC 59.270 50.000 0.00 0.00 38.31 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.478673 CCTTTTGTTTAACTTTAACCTGCAGG 59.521 38.462 31.60 31.60 42.17 4.85
37 38 4.539235 TGCAGGGCAGACACTAGA 57.461 55.556 0.00 0.00 33.32 2.43
38 39 1.975327 TGCAGGGCAGACACTAGAC 59.025 57.895 0.00 0.00 33.32 2.59
39 40 0.831711 TGCAGGGCAGACACTAGACA 60.832 55.000 0.00 0.00 33.32 3.41
160 161 5.308237 TCCCTTCCCTAGCTTGATTATTCTC 59.692 44.000 0.00 0.00 0.00 2.87
232 233 1.045407 GCCATGCCCATGATCACAAT 58.955 50.000 9.73 0.00 41.20 2.71
233 234 1.000506 GCCATGCCCATGATCACAATC 59.999 52.381 9.73 0.00 41.20 2.67
235 236 2.035449 CCATGCCCATGATCACAATCAC 59.965 50.000 9.73 0.00 44.51 3.06
236 237 2.510928 TGCCCATGATCACAATCACA 57.489 45.000 0.00 0.00 44.51 3.58
237 238 2.371306 TGCCCATGATCACAATCACAG 58.629 47.619 0.00 0.00 44.51 3.66
341 342 2.479560 GGAACTTGTTCCACACTGTTGC 60.480 50.000 23.19 0.00 40.79 4.17
401 402 1.489881 CTGCGGTTTTTGTTGCTGCC 61.490 55.000 0.00 0.00 33.88 4.85
406 407 1.227205 TTTTTGTTGCTGCCGCTGG 60.227 52.632 0.70 0.00 36.97 4.85
439 440 2.809696 TGCATGATGAGCATATTGTCCG 59.190 45.455 0.00 0.00 37.02 4.79
441 442 3.996363 GCATGATGAGCATATTGTCCGTA 59.004 43.478 0.00 0.00 34.82 4.02
443 444 4.937201 TGATGAGCATATTGTCCGTAGT 57.063 40.909 0.00 0.00 0.00 2.73
444 445 5.276461 TGATGAGCATATTGTCCGTAGTT 57.724 39.130 0.00 0.00 0.00 2.24
445 446 5.670485 TGATGAGCATATTGTCCGTAGTTT 58.330 37.500 0.00 0.00 0.00 2.66
446 447 6.112734 TGATGAGCATATTGTCCGTAGTTTT 58.887 36.000 0.00 0.00 0.00 2.43
447 448 6.597672 TGATGAGCATATTGTCCGTAGTTTTT 59.402 34.615 0.00 0.00 0.00 1.94
449 450 6.170506 TGAGCATATTGTCCGTAGTTTTTCT 58.829 36.000 0.00 0.00 0.00 2.52
450 451 6.653320 TGAGCATATTGTCCGTAGTTTTTCTT 59.347 34.615 0.00 0.00 0.00 2.52
451 452 7.073342 AGCATATTGTCCGTAGTTTTTCTTC 57.927 36.000 0.00 0.00 0.00 2.87
452 453 6.879458 AGCATATTGTCCGTAGTTTTTCTTCT 59.121 34.615 0.00 0.00 0.00 2.85
453 454 6.961554 GCATATTGTCCGTAGTTTTTCTTCTG 59.038 38.462 0.00 0.00 0.00 3.02
454 455 7.148474 GCATATTGTCCGTAGTTTTTCTTCTGA 60.148 37.037 0.00 0.00 0.00 3.27
455 456 8.883731 CATATTGTCCGTAGTTTTTCTTCTGAT 58.116 33.333 0.00 0.00 0.00 2.90
456 457 6.539649 TTGTCCGTAGTTTTTCTTCTGATG 57.460 37.500 0.00 0.00 0.00 3.07
457 458 4.994852 TGTCCGTAGTTTTTCTTCTGATGG 59.005 41.667 0.00 0.00 0.00 3.51
458 459 4.392138 GTCCGTAGTTTTTCTTCTGATGGG 59.608 45.833 0.00 0.00 0.00 4.00
459 460 3.689649 CCGTAGTTTTTCTTCTGATGGGG 59.310 47.826 0.00 0.00 0.00 4.96
460 461 3.127030 CGTAGTTTTTCTTCTGATGGGGC 59.873 47.826 0.00 0.00 0.00 5.80
463 464 2.833943 GTTTTTCTTCTGATGGGGCCAT 59.166 45.455 4.39 0.00 39.69 4.40
464 465 2.148446 TTTCTTCTGATGGGGCCATG 57.852 50.000 4.39 0.00 36.70 3.66
465 466 0.396139 TTCTTCTGATGGGGCCATGC 60.396 55.000 4.39 0.00 36.70 4.06
477 478 0.462789 GGCCATGCCTTTTCATGAGG 59.537 55.000 0.00 0.00 46.69 3.86
657 1117 0.107214 TTGGATTGCTCCGTCCATCC 60.107 55.000 0.00 0.00 45.37 3.51
682 1143 2.765807 CCACCCCTGCCGATCTCT 60.766 66.667 0.00 0.00 0.00 3.10
686 1147 0.253327 ACCCCTGCCGATCTCTTTTC 59.747 55.000 0.00 0.00 0.00 2.29
696 1157 3.118261 CCGATCTCTTTTCCCATGGAGAA 60.118 47.826 15.22 12.35 38.16 2.87
697 1158 4.125703 CGATCTCTTTTCCCATGGAGAAG 58.874 47.826 15.22 13.61 42.89 2.85
698 1159 4.141846 CGATCTCTTTTCCCATGGAGAAGA 60.142 45.833 15.22 16.91 46.23 2.87
739 1202 4.154347 CCTGCACGCCCCTCTCTC 62.154 72.222 0.00 0.00 0.00 3.20
740 1203 3.073735 CTGCACGCCCCTCTCTCT 61.074 66.667 0.00 0.00 0.00 3.10
743 1206 2.355193 GCACGCCCCTCTCTCTTCT 61.355 63.158 0.00 0.00 0.00 2.85
752 1215 3.052490 CCCCTCTCTCTTCTTCCTCCTTA 60.052 52.174 0.00 0.00 0.00 2.69
753 1216 3.958147 CCCTCTCTCTTCTTCCTCCTTAC 59.042 52.174 0.00 0.00 0.00 2.34
754 1217 4.325816 CCCTCTCTCTTCTTCCTCCTTACT 60.326 50.000 0.00 0.00 0.00 2.24
755 1218 5.103855 CCCTCTCTCTTCTTCCTCCTTACTA 60.104 48.000 0.00 0.00 0.00 1.82
758 1221 7.147966 CCTCTCTCTTCTTCCTCCTTACTAAAC 60.148 44.444 0.00 0.00 0.00 2.01
760 1223 6.563163 TCTCTTCTTCCTCCTTACTAAACCT 58.437 40.000 0.00 0.00 0.00 3.50
838 1320 6.090088 GCAAGTGCTCTGTTATTATCTATCCG 59.910 42.308 0.00 0.00 38.21 4.18
915 1401 2.975410 TGCTTCTGAATTTGACGCAG 57.025 45.000 8.67 0.00 34.53 5.18
997 1483 4.093998 GTGTCAATCAGTCCATTGTAGCTG 59.906 45.833 0.00 0.00 35.56 4.24
1023 1534 0.886490 CTCCTGATATGGGCGGTTGC 60.886 60.000 0.00 0.00 41.71 4.17
1242 1759 4.057428 GGCGTCACGGAGCTGAGT 62.057 66.667 0.00 0.00 0.00 3.41
1243 1760 2.049063 GCGTCACGGAGCTGAGTT 60.049 61.111 0.00 0.00 0.00 3.01
1245 1762 0.388134 GCGTCACGGAGCTGAGTTTA 60.388 55.000 0.00 0.00 0.00 2.01
1290 1815 4.474846 CCGGACAATTTGGCGGCG 62.475 66.667 0.51 0.51 0.00 6.46
1611 2217 2.925170 AGCCTTGAGGTGCTCCGT 60.925 61.111 0.00 0.00 39.05 4.69
1614 2220 2.743718 CTTGAGGTGCTCCGTGGT 59.256 61.111 0.00 0.00 39.05 4.16
2115 2721 0.685097 GCACCAACCTCACAGACCTA 59.315 55.000 0.00 0.00 0.00 3.08
3114 4095 2.028484 GACGCCAGTGACCGTGAA 59.972 61.111 12.45 0.00 37.87 3.18
3123 4104 2.661866 GACCGTGAACGTGCAGCT 60.662 61.111 0.00 0.00 37.74 4.24
3237 4246 4.237809 GGCTCGATTTTCGGCGGC 62.238 66.667 7.21 0.00 40.88 6.53
3861 4906 2.762459 ATCGCTCCCGGTAAGGCA 60.762 61.111 0.00 0.00 39.21 4.75
3889 4983 4.038271 TCAGCCACAGAATTCCATCTTT 57.962 40.909 0.65 0.00 0.00 2.52
3890 4984 3.760151 TCAGCCACAGAATTCCATCTTTG 59.240 43.478 0.65 0.00 0.00 2.77
3891 4985 3.508793 CAGCCACAGAATTCCATCTTTGT 59.491 43.478 0.65 0.00 0.00 2.83
3894 4988 4.142381 GCCACAGAATTCCATCTTTGTACC 60.142 45.833 0.65 0.00 0.00 3.34
3895 4989 5.009631 CCACAGAATTCCATCTTTGTACCA 58.990 41.667 0.65 0.00 0.00 3.25
3897 4991 5.010282 ACAGAATTCCATCTTTGTACCACC 58.990 41.667 0.65 0.00 0.00 4.61
4577 5722 2.837291 CCAGGAGCTAGCCTCGCT 60.837 66.667 12.13 0.00 41.71 4.93
4630 5775 2.268076 CCCGGTGGAGCAAACAAGG 61.268 63.158 0.00 0.00 0.00 3.61
4690 5838 2.867429 AGCAACAGCAATAATTCGCAC 58.133 42.857 0.00 0.00 0.00 5.34
4779 5929 5.397672 CCTGTCCAATCTCCATGATCTCTTT 60.398 44.000 0.00 0.00 33.57 2.52
4859 6019 4.629523 TCCCCGTTCGTGTTGGCC 62.630 66.667 0.00 0.00 0.00 5.36
4882 6042 3.187058 GCGACGGGCAATCATGTT 58.813 55.556 0.00 0.00 42.87 2.71
4883 6043 1.506262 GCGACGGGCAATCATGTTT 59.494 52.632 0.00 0.00 42.87 2.83
4971 6137 2.574929 CGGAAATGGACGGACGGA 59.425 61.111 0.00 0.00 0.00 4.69
4973 6139 1.294138 GGAAATGGACGGACGGACA 59.706 57.895 0.00 0.00 0.00 4.02
5013 6179 4.147322 GCGACAATCGGTGGTGCG 62.147 66.667 0.00 0.00 40.84 5.34
5039 6205 1.442769 CGGCACATACTGCTTTCTGT 58.557 50.000 0.00 0.00 46.25 3.41
5060 6226 5.064314 GTAGGTTACTACTCCCTCATCCT 57.936 47.826 0.00 0.00 44.93 3.24
5061 6227 6.198237 GTAGGTTACTACTCCCTCATCCTA 57.802 45.833 0.00 0.00 44.93 2.94
5062 6228 5.952161 AGGTTACTACTCCCTCATCCTAT 57.048 43.478 0.00 0.00 0.00 2.57
5063 6229 7.926705 GTAGGTTACTACTCCCTCATCCTATA 58.073 42.308 0.00 0.00 44.93 1.31
5064 6230 7.417811 AGGTTACTACTCCCTCATCCTATAA 57.582 40.000 0.00 0.00 0.00 0.98
5065 6231 8.013806 AGGTTACTACTCCCTCATCCTATAAT 57.986 38.462 0.00 0.00 0.00 1.28
5066 6232 9.136828 AGGTTACTACTCCCTCATCCTATAATA 57.863 37.037 0.00 0.00 0.00 0.98
5067 6233 9.939424 GGTTACTACTCCCTCATCCTATAATAT 57.061 37.037 0.00 0.00 0.00 1.28
5071 6237 9.535801 ACTACTCCCTCATCCTATAATATAGGA 57.464 37.037 26.14 26.14 46.65 2.94
5072 6238 9.802039 CTACTCCCTCATCCTATAATATAGGAC 57.198 40.741 26.39 0.00 45.56 3.85
5073 6239 7.291566 ACTCCCTCATCCTATAATATAGGACG 58.708 42.308 26.39 20.48 45.56 4.79
5074 6240 6.069331 TCCCTCATCCTATAATATAGGACGC 58.931 44.000 26.39 0.00 45.56 5.19
5075 6241 5.244178 CCCTCATCCTATAATATAGGACGCC 59.756 48.000 26.39 0.00 45.56 5.68
5076 6242 6.071984 CCTCATCCTATAATATAGGACGCCT 58.928 44.000 26.39 11.68 45.56 5.52
5077 6243 6.551601 CCTCATCCTATAATATAGGACGCCTT 59.448 42.308 26.39 11.35 45.56 4.35
5078 6244 7.070074 CCTCATCCTATAATATAGGACGCCTTT 59.930 40.741 26.39 10.71 45.56 3.11
5079 6245 8.375493 TCATCCTATAATATAGGACGCCTTTT 57.625 34.615 26.39 10.08 45.56 2.27
5080 6246 8.258007 TCATCCTATAATATAGGACGCCTTTTG 58.742 37.037 26.39 19.32 45.56 2.44
5081 6247 7.786046 TCCTATAATATAGGACGCCTTTTGA 57.214 36.000 21.75 0.00 38.71 2.69
5082 6248 7.609056 TCCTATAATATAGGACGCCTTTTGAC 58.391 38.462 21.75 0.00 38.71 3.18
5083 6249 6.817140 CCTATAATATAGGACGCCTTTTGACC 59.183 42.308 19.14 0.00 36.85 4.02
5084 6250 4.772886 AATATAGGACGCCTTTTGACCT 57.227 40.909 3.71 0.00 34.61 3.85
5085 6251 5.881923 AATATAGGACGCCTTTTGACCTA 57.118 39.130 3.71 0.00 37.57 3.08
5086 6252 3.538634 ATAGGACGCCTTTTGACCTAC 57.461 47.619 3.71 0.00 36.29 3.18
5087 6253 1.349067 AGGACGCCTTTTGACCTACT 58.651 50.000 0.00 0.00 0.00 2.57
5088 6254 1.002087 AGGACGCCTTTTGACCTACTG 59.998 52.381 0.00 0.00 0.00 2.74
5089 6255 1.270678 GGACGCCTTTTGACCTACTGT 60.271 52.381 0.00 0.00 0.00 3.55
5090 6256 2.028748 GGACGCCTTTTGACCTACTGTA 60.029 50.000 0.00 0.00 0.00 2.74
5091 6257 3.251571 GACGCCTTTTGACCTACTGTAG 58.748 50.000 7.87 7.87 0.00 2.74
5092 6258 2.631545 ACGCCTTTTGACCTACTGTAGT 59.368 45.455 13.42 2.36 0.00 2.73
5093 6259 2.993899 CGCCTTTTGACCTACTGTAGTG 59.006 50.000 13.42 7.70 0.00 2.74
5094 6260 3.554337 CGCCTTTTGACCTACTGTAGTGT 60.554 47.826 13.42 10.56 0.00 3.55
5095 6261 3.995048 GCCTTTTGACCTACTGTAGTGTC 59.005 47.826 20.33 20.33 0.00 3.67
5096 6262 4.502604 GCCTTTTGACCTACTGTAGTGTCA 60.503 45.833 23.42 23.42 35.59 3.58
5097 6263 4.989168 CCTTTTGACCTACTGTAGTGTCAC 59.011 45.833 25.39 0.00 36.45 3.67
5098 6264 5.452776 CCTTTTGACCTACTGTAGTGTCACA 60.453 44.000 25.39 20.34 36.45 3.58
5099 6265 5.601583 TTTGACCTACTGTAGTGTCACAA 57.398 39.130 25.39 20.83 36.45 3.33
5100 6266 5.601583 TTGACCTACTGTAGTGTCACAAA 57.398 39.130 25.39 15.70 36.45 2.83
5101 6267 5.601583 TGACCTACTGTAGTGTCACAAAA 57.398 39.130 23.42 10.07 33.82 2.44
5102 6268 5.353938 TGACCTACTGTAGTGTCACAAAAC 58.646 41.667 23.42 1.21 33.82 2.43
5103 6269 4.365723 ACCTACTGTAGTGTCACAAAACG 58.634 43.478 13.42 0.91 0.00 3.60
5104 6270 4.142093 ACCTACTGTAGTGTCACAAAACGT 60.142 41.667 13.42 5.99 0.00 3.99
5105 6271 4.443394 CCTACTGTAGTGTCACAAAACGTC 59.557 45.833 13.42 0.00 0.00 4.34
5106 6272 4.119442 ACTGTAGTGTCACAAAACGTCT 57.881 40.909 5.62 0.00 0.00 4.18
5107 6273 4.501071 ACTGTAGTGTCACAAAACGTCTT 58.499 39.130 5.62 0.00 0.00 3.01
5108 6274 5.653507 ACTGTAGTGTCACAAAACGTCTTA 58.346 37.500 5.62 0.00 0.00 2.10
5109 6275 6.278363 ACTGTAGTGTCACAAAACGTCTTAT 58.722 36.000 5.62 0.00 0.00 1.73
5110 6276 6.200286 ACTGTAGTGTCACAAAACGTCTTATG 59.800 38.462 5.62 0.00 0.00 1.90
5111 6277 6.044046 TGTAGTGTCACAAAACGTCTTATGT 58.956 36.000 5.62 0.00 0.00 2.29
5112 6278 6.535865 TGTAGTGTCACAAAACGTCTTATGTT 59.464 34.615 5.62 0.00 0.00 2.71
5113 6279 7.705752 TGTAGTGTCACAAAACGTCTTATGTTA 59.294 33.333 5.62 0.00 0.00 2.41
5114 6280 7.724305 AGTGTCACAAAACGTCTTATGTTAT 57.276 32.000 5.62 0.00 0.00 1.89
5115 6281 8.821147 AGTGTCACAAAACGTCTTATGTTATA 57.179 30.769 5.62 0.00 0.00 0.98
5116 6282 8.922676 AGTGTCACAAAACGTCTTATGTTATAG 58.077 33.333 5.62 0.00 0.00 1.31
5117 6283 8.166706 GTGTCACAAAACGTCTTATGTTATAGG 58.833 37.037 0.00 0.00 0.00 2.57
5118 6284 8.089597 TGTCACAAAACGTCTTATGTTATAGGA 58.910 33.333 0.00 0.00 0.00 2.94
5119 6285 8.378421 GTCACAAAACGTCTTATGTTATAGGAC 58.622 37.037 0.00 0.00 0.00 3.85
5124 6290 5.044428 CGTCTTATGTTATAGGACGGAGG 57.956 47.826 19.44 0.00 43.69 4.30
5125 6291 4.082895 CGTCTTATGTTATAGGACGGAGGG 60.083 50.000 19.44 0.00 43.69 4.30
5126 6292 5.075493 GTCTTATGTTATAGGACGGAGGGA 58.925 45.833 0.00 0.00 0.00 4.20
5127 6293 5.183522 GTCTTATGTTATAGGACGGAGGGAG 59.816 48.000 0.00 0.00 0.00 4.30
5128 6294 3.614568 ATGTTATAGGACGGAGGGAGT 57.385 47.619 0.00 0.00 0.00 3.85
5129 6295 4.736611 ATGTTATAGGACGGAGGGAGTA 57.263 45.455 0.00 0.00 0.00 2.59
5130 6296 4.096190 TGTTATAGGACGGAGGGAGTAG 57.904 50.000 0.00 0.00 0.00 2.57
5131 6297 3.461085 TGTTATAGGACGGAGGGAGTAGT 59.539 47.826 0.00 0.00 0.00 2.73
5132 6298 4.660303 TGTTATAGGACGGAGGGAGTAGTA 59.340 45.833 0.00 0.00 0.00 1.82
5133 6299 5.132648 TGTTATAGGACGGAGGGAGTAGTAA 59.867 44.000 0.00 0.00 0.00 2.24
5134 6300 6.183361 TGTTATAGGACGGAGGGAGTAGTAAT 60.183 42.308 0.00 0.00 0.00 1.89
5135 6301 2.946785 AGGACGGAGGGAGTAGTAATG 58.053 52.381 0.00 0.00 0.00 1.90
5136 6302 2.512896 AGGACGGAGGGAGTAGTAATGA 59.487 50.000 0.00 0.00 0.00 2.57
5137 6303 2.885894 GGACGGAGGGAGTAGTAATGAG 59.114 54.545 0.00 0.00 0.00 2.90
5138 6304 2.293955 GACGGAGGGAGTAGTAATGAGC 59.706 54.545 0.00 0.00 0.00 4.26
5139 6305 1.267261 CGGAGGGAGTAGTAATGAGCG 59.733 57.143 0.00 0.00 0.00 5.03
5140 6306 2.308690 GGAGGGAGTAGTAATGAGCGT 58.691 52.381 0.00 0.00 0.00 5.07
5141 6307 2.034812 GGAGGGAGTAGTAATGAGCGTG 59.965 54.545 0.00 0.00 0.00 5.34
5142 6308 2.950309 GAGGGAGTAGTAATGAGCGTGA 59.050 50.000 0.00 0.00 0.00 4.35
5143 6309 3.362706 AGGGAGTAGTAATGAGCGTGAA 58.637 45.455 0.00 0.00 0.00 3.18
5144 6310 3.767673 AGGGAGTAGTAATGAGCGTGAAA 59.232 43.478 0.00 0.00 0.00 2.69
5145 6311 4.406003 AGGGAGTAGTAATGAGCGTGAAAT 59.594 41.667 0.00 0.00 0.00 2.17
5146 6312 5.104900 AGGGAGTAGTAATGAGCGTGAAATT 60.105 40.000 0.00 0.00 0.00 1.82
5147 6313 5.585047 GGGAGTAGTAATGAGCGTGAAATTT 59.415 40.000 0.00 0.00 0.00 1.82
5148 6314 6.759827 GGGAGTAGTAATGAGCGTGAAATTTA 59.240 38.462 0.00 0.00 0.00 1.40
5149 6315 7.441458 GGGAGTAGTAATGAGCGTGAAATTTAT 59.559 37.037 0.00 0.00 0.00 1.40
5150 6316 8.488764 GGAGTAGTAATGAGCGTGAAATTTATC 58.511 37.037 0.00 0.00 0.00 1.75
5151 6317 8.366671 AGTAGTAATGAGCGTGAAATTTATCC 57.633 34.615 0.00 0.00 0.00 2.59
5152 6318 8.204836 AGTAGTAATGAGCGTGAAATTTATCCT 58.795 33.333 0.00 0.00 0.00 3.24
5153 6319 7.865706 AGTAATGAGCGTGAAATTTATCCTT 57.134 32.000 0.00 0.00 0.00 3.36
5158 6324 5.065988 TGAGCGTGAAATTTATCCTTTAGGC 59.934 40.000 0.00 0.00 34.44 3.93
5196 6362 2.440796 CACGCTGGGCCATGGAAT 60.441 61.111 18.40 0.00 0.00 3.01
5197 6363 2.440796 ACGCTGGGCCATGGAATG 60.441 61.111 18.40 2.87 46.21 2.67
5198 6364 2.440796 CGCTGGGCCATGGAATGT 60.441 61.111 18.40 0.00 44.81 2.71
5199 6365 2.053865 CGCTGGGCCATGGAATGTT 61.054 57.895 18.40 0.00 44.81 2.71
5200 6366 1.818555 GCTGGGCCATGGAATGTTC 59.181 57.895 18.40 0.00 44.81 3.18
5201 6367 0.971959 GCTGGGCCATGGAATGTTCA 60.972 55.000 18.40 2.59 44.81 3.18
5202 6368 1.108776 CTGGGCCATGGAATGTTCAG 58.891 55.000 18.40 8.75 44.81 3.02
5203 6369 0.703488 TGGGCCATGGAATGTTCAGA 59.297 50.000 18.40 0.00 44.81 3.27
5204 6370 1.341285 TGGGCCATGGAATGTTCAGAG 60.341 52.381 18.40 0.00 44.81 3.35
5205 6371 1.341383 GGGCCATGGAATGTTCAGAGT 60.341 52.381 18.40 0.00 44.81 3.24
5206 6372 2.450476 GGCCATGGAATGTTCAGAGTT 58.550 47.619 18.40 0.00 44.81 3.01
5207 6373 2.827921 GGCCATGGAATGTTCAGAGTTT 59.172 45.455 18.40 0.00 44.81 2.66
5208 6374 3.259123 GGCCATGGAATGTTCAGAGTTTT 59.741 43.478 18.40 0.00 44.81 2.43
5209 6375 4.262592 GGCCATGGAATGTTCAGAGTTTTT 60.263 41.667 18.40 0.00 44.81 1.94
5254 6420 9.528489 TTAACAATATAAAAGAAAGCCACCTCT 57.472 29.630 0.00 0.00 0.00 3.69
5255 6421 8.422577 AACAATATAAAAGAAAGCCACCTCTT 57.577 30.769 0.00 0.00 33.25 2.85
5256 6422 8.056407 ACAATATAAAAGAAAGCCACCTCTTC 57.944 34.615 0.00 0.00 30.57 2.87
5257 6423 6.927294 ATATAAAAGAAAGCCACCTCTTCG 57.073 37.500 0.00 0.00 30.57 3.79
5258 6424 2.930826 AAAGAAAGCCACCTCTTCGA 57.069 45.000 0.00 0.00 30.57 3.71
5259 6425 3.425162 AAAGAAAGCCACCTCTTCGAT 57.575 42.857 0.00 0.00 30.57 3.59
5260 6426 3.425162 AAGAAAGCCACCTCTTCGATT 57.575 42.857 0.00 0.00 0.00 3.34
5261 6427 3.425162 AGAAAGCCACCTCTTCGATTT 57.575 42.857 0.00 0.00 0.00 2.17
5262 6428 3.339141 AGAAAGCCACCTCTTCGATTTC 58.661 45.455 0.00 0.00 0.00 2.17
5263 6429 2.115343 AAGCCACCTCTTCGATTTCC 57.885 50.000 0.00 0.00 0.00 3.13
5264 6430 0.984230 AGCCACCTCTTCGATTTCCA 59.016 50.000 0.00 0.00 0.00 3.53
5265 6431 1.561542 AGCCACCTCTTCGATTTCCAT 59.438 47.619 0.00 0.00 0.00 3.41
5266 6432 2.025887 AGCCACCTCTTCGATTTCCATT 60.026 45.455 0.00 0.00 0.00 3.16
5267 6433 3.199946 AGCCACCTCTTCGATTTCCATTA 59.800 43.478 0.00 0.00 0.00 1.90
5268 6434 3.312697 GCCACCTCTTCGATTTCCATTAC 59.687 47.826 0.00 0.00 0.00 1.89
5269 6435 4.770795 CCACCTCTTCGATTTCCATTACT 58.229 43.478 0.00 0.00 0.00 2.24
5270 6436 5.684030 GCCACCTCTTCGATTTCCATTACTA 60.684 44.000 0.00 0.00 0.00 1.82
5271 6437 5.986135 CCACCTCTTCGATTTCCATTACTAG 59.014 44.000 0.00 0.00 0.00 2.57
5272 6438 6.183360 CCACCTCTTCGATTTCCATTACTAGA 60.183 42.308 0.00 0.00 0.00 2.43
5273 6439 7.265673 CACCTCTTCGATTTCCATTACTAGAA 58.734 38.462 0.00 0.00 0.00 2.10
5274 6440 7.764443 CACCTCTTCGATTTCCATTACTAGAAA 59.236 37.037 0.00 0.00 36.48 2.52
5275 6441 8.487028 ACCTCTTCGATTTCCATTACTAGAAAT 58.513 33.333 0.00 0.00 43.58 2.17
5282 6448 7.814264 ATTTCCATTACTAGAAATCAGCAGG 57.186 36.000 0.00 0.00 38.06 4.85
5283 6449 5.957771 TCCATTACTAGAAATCAGCAGGT 57.042 39.130 0.00 0.00 0.00 4.00
5284 6450 6.313519 TCCATTACTAGAAATCAGCAGGTT 57.686 37.500 0.00 0.00 0.00 3.50
5285 6451 6.349300 TCCATTACTAGAAATCAGCAGGTTC 58.651 40.000 0.00 0.00 0.00 3.62
5286 6452 6.156949 TCCATTACTAGAAATCAGCAGGTTCT 59.843 38.462 0.00 0.00 35.77 3.01
5287 6453 6.825721 CCATTACTAGAAATCAGCAGGTTCTT 59.174 38.462 0.00 0.00 33.70 2.52
5288 6454 7.987458 CCATTACTAGAAATCAGCAGGTTCTTA 59.013 37.037 0.00 0.00 33.70 2.10
5289 6455 8.821894 CATTACTAGAAATCAGCAGGTTCTTAC 58.178 37.037 0.00 0.00 33.70 2.34
5290 6456 6.360370 ACTAGAAATCAGCAGGTTCTTACA 57.640 37.500 0.00 0.00 33.70 2.41
5291 6457 6.166982 ACTAGAAATCAGCAGGTTCTTACAC 58.833 40.000 0.00 0.00 33.70 2.90
5292 6458 4.327680 AGAAATCAGCAGGTTCTTACACC 58.672 43.478 0.00 0.00 37.04 4.16
5293 6459 3.788227 AATCAGCAGGTTCTTACACCA 57.212 42.857 0.00 0.00 39.62 4.17
5294 6460 4.307032 AATCAGCAGGTTCTTACACCAT 57.693 40.909 0.00 0.00 39.62 3.55
5295 6461 3.334583 TCAGCAGGTTCTTACACCATC 57.665 47.619 0.00 0.00 39.62 3.51
5296 6462 2.637382 TCAGCAGGTTCTTACACCATCA 59.363 45.455 0.00 0.00 39.62 3.07
5297 6463 3.072330 TCAGCAGGTTCTTACACCATCAA 59.928 43.478 0.00 0.00 39.62 2.57
5298 6464 3.820467 CAGCAGGTTCTTACACCATCAAA 59.180 43.478 0.00 0.00 39.62 2.69
5299 6465 4.278170 CAGCAGGTTCTTACACCATCAAAA 59.722 41.667 0.00 0.00 39.62 2.44
5300 6466 5.047802 CAGCAGGTTCTTACACCATCAAAAT 60.048 40.000 0.00 0.00 39.62 1.82
5301 6467 6.150976 CAGCAGGTTCTTACACCATCAAAATA 59.849 38.462 0.00 0.00 39.62 1.40
5302 6468 6.891908 AGCAGGTTCTTACACCATCAAAATAT 59.108 34.615 0.00 0.00 39.62 1.28
5303 6469 6.974622 GCAGGTTCTTACACCATCAAAATATG 59.025 38.462 0.00 0.00 39.62 1.78
5304 6470 7.148086 GCAGGTTCTTACACCATCAAAATATGA 60.148 37.037 0.00 0.00 39.62 2.15
5305 6471 8.739039 CAGGTTCTTACACCATCAAAATATGAA 58.261 33.333 0.00 0.00 39.62 2.57
5306 6472 9.308000 AGGTTCTTACACCATCAAAATATGAAA 57.692 29.630 0.00 0.00 39.62 2.69
5307 6473 9.921637 GGTTCTTACACCATCAAAATATGAAAA 57.078 29.630 0.00 0.00 42.54 2.29
5328 6494 9.528018 TGAAAAGATAACAAAGCTTTAACCTTG 57.472 29.630 12.25 1.26 42.90 3.61
5329 6495 7.946655 AAAGATAACAAAGCTTTAACCTTGC 57.053 32.000 12.25 0.00 41.93 4.01
5330 6496 6.648879 AGATAACAAAGCTTTAACCTTGCA 57.351 33.333 12.25 0.00 0.00 4.08
5331 6497 7.232118 AGATAACAAAGCTTTAACCTTGCAT 57.768 32.000 12.25 0.00 0.00 3.96
5332 6498 7.315890 AGATAACAAAGCTTTAACCTTGCATC 58.684 34.615 12.25 6.10 0.00 3.91
5333 6499 5.535753 AACAAAGCTTTAACCTTGCATCT 57.464 34.783 12.25 0.00 0.00 2.90
5334 6500 6.648879 AACAAAGCTTTAACCTTGCATCTA 57.351 33.333 12.25 0.00 0.00 1.98
5335 6501 6.648879 ACAAAGCTTTAACCTTGCATCTAA 57.351 33.333 12.25 0.00 0.00 2.10
5336 6502 6.681777 ACAAAGCTTTAACCTTGCATCTAAG 58.318 36.000 12.25 0.00 0.00 2.18
5337 6503 4.972514 AGCTTTAACCTTGCATCTAAGC 57.027 40.909 0.00 0.00 37.40 3.09
5338 6504 4.335416 AGCTTTAACCTTGCATCTAAGCA 58.665 39.130 14.57 0.00 43.99 3.91
5339 6505 4.397417 AGCTTTAACCTTGCATCTAAGCAG 59.603 41.667 14.57 0.00 46.54 4.24
5340 6506 4.666237 CTTTAACCTTGCATCTAAGCAGC 58.334 43.478 0.00 0.00 46.54 5.25
5341 6507 2.503895 AACCTTGCATCTAAGCAGCT 57.496 45.000 0.00 0.00 46.54 4.24
5342 6508 3.634397 AACCTTGCATCTAAGCAGCTA 57.366 42.857 0.00 0.00 46.54 3.32
5343 6509 3.634397 ACCTTGCATCTAAGCAGCTAA 57.366 42.857 0.00 0.00 46.54 3.09
5344 6510 3.955471 ACCTTGCATCTAAGCAGCTAAA 58.045 40.909 0.00 0.00 46.54 1.85
5345 6511 4.335416 ACCTTGCATCTAAGCAGCTAAAA 58.665 39.130 0.00 0.00 46.54 1.52
5346 6512 4.397417 ACCTTGCATCTAAGCAGCTAAAAG 59.603 41.667 0.00 0.00 46.54 2.27
5347 6513 4.349501 CTTGCATCTAAGCAGCTAAAAGC 58.650 43.478 0.00 0.00 46.54 3.51
5361 6527 4.299978 GCTAAAAGCGATACAGGAGTAGG 58.700 47.826 0.00 0.00 32.86 3.18
5362 6528 4.037684 GCTAAAAGCGATACAGGAGTAGGA 59.962 45.833 0.00 0.00 32.86 2.94
5363 6529 4.657436 AAAAGCGATACAGGAGTAGGAG 57.343 45.455 0.00 0.00 32.86 3.69
5364 6530 1.611519 AGCGATACAGGAGTAGGAGC 58.388 55.000 0.00 0.00 32.86 4.70
5365 6531 0.599060 GCGATACAGGAGTAGGAGCC 59.401 60.000 0.00 0.00 32.86 4.70
5366 6532 1.982660 CGATACAGGAGTAGGAGCCA 58.017 55.000 0.00 0.00 32.86 4.75
5367 6533 2.520069 CGATACAGGAGTAGGAGCCAT 58.480 52.381 0.00 0.00 32.86 4.40
5368 6534 2.490115 CGATACAGGAGTAGGAGCCATC 59.510 54.545 0.00 0.00 32.86 3.51
5377 6543 3.493303 GGAGCCATCCCTCCCACC 61.493 72.222 0.00 0.00 44.60 4.61
5378 6544 3.493303 GAGCCATCCCTCCCACCC 61.493 72.222 0.00 0.00 0.00 4.61
5379 6545 4.044390 AGCCATCCCTCCCACCCT 62.044 66.667 0.00 0.00 0.00 4.34
5380 6546 3.023735 GCCATCCCTCCCACCCTT 61.024 66.667 0.00 0.00 0.00 3.95
5381 6547 1.696314 GCCATCCCTCCCACCCTTA 60.696 63.158 0.00 0.00 0.00 2.69
5382 6548 1.996070 GCCATCCCTCCCACCCTTAC 61.996 65.000 0.00 0.00 0.00 2.34
5383 6549 0.623324 CCATCCCTCCCACCCTTACA 60.623 60.000 0.00 0.00 0.00 2.41
5384 6550 1.522900 CATCCCTCCCACCCTTACAT 58.477 55.000 0.00 0.00 0.00 2.29
5385 6551 1.421646 CATCCCTCCCACCCTTACATC 59.578 57.143 0.00 0.00 0.00 3.06
5386 6552 0.722676 TCCCTCCCACCCTTACATCT 59.277 55.000 0.00 0.00 0.00 2.90
5387 6553 1.941682 TCCCTCCCACCCTTACATCTA 59.058 52.381 0.00 0.00 0.00 1.98
5388 6554 2.047830 CCCTCCCACCCTTACATCTAC 58.952 57.143 0.00 0.00 0.00 2.59
5389 6555 2.360423 CCCTCCCACCCTTACATCTACT 60.360 54.545 0.00 0.00 0.00 2.57
5390 6556 3.116862 CCCTCCCACCCTTACATCTACTA 60.117 52.174 0.00 0.00 0.00 1.82
5391 6557 4.450861 CCCTCCCACCCTTACATCTACTAT 60.451 50.000 0.00 0.00 0.00 2.12
5392 6558 4.773149 CCTCCCACCCTTACATCTACTATC 59.227 50.000 0.00 0.00 0.00 2.08
5393 6559 5.459831 CCTCCCACCCTTACATCTACTATCT 60.460 48.000 0.00 0.00 0.00 1.98
5394 6560 6.240497 CCTCCCACCCTTACATCTACTATCTA 60.240 46.154 0.00 0.00 0.00 1.98
5395 6561 6.791371 TCCCACCCTTACATCTACTATCTAG 58.209 44.000 0.00 0.00 0.00 2.43
5396 6562 5.419471 CCCACCCTTACATCTACTATCTAGC 59.581 48.000 0.00 0.00 0.00 3.42
5397 6563 6.010850 CCACCCTTACATCTACTATCTAGCA 58.989 44.000 0.00 0.00 0.00 3.49
5398 6564 6.151985 CCACCCTTACATCTACTATCTAGCAG 59.848 46.154 0.00 0.00 0.00 4.24
5399 6565 5.712917 ACCCTTACATCTACTATCTAGCAGC 59.287 44.000 0.00 0.00 0.00 5.25
5400 6566 5.949354 CCCTTACATCTACTATCTAGCAGCT 59.051 44.000 0.00 0.00 0.00 4.24
5401 6567 6.094881 CCCTTACATCTACTATCTAGCAGCTC 59.905 46.154 0.00 0.00 0.00 4.09
5402 6568 6.884295 CCTTACATCTACTATCTAGCAGCTCT 59.116 42.308 0.00 0.00 0.00 4.09
5403 6569 7.148255 CCTTACATCTACTATCTAGCAGCTCTG 60.148 44.444 0.00 0.00 0.00 3.35
5404 6570 5.875224 ACATCTACTATCTAGCAGCTCTGA 58.125 41.667 0.00 0.00 0.00 3.27
5405 6571 6.484288 ACATCTACTATCTAGCAGCTCTGAT 58.516 40.000 0.00 7.13 0.00 2.90
5406 6572 6.599244 ACATCTACTATCTAGCAGCTCTGATC 59.401 42.308 12.53 0.00 0.00 2.92
5407 6573 6.373005 TCTACTATCTAGCAGCTCTGATCT 57.627 41.667 12.53 4.68 0.00 2.75
5408 6574 7.489239 TCTACTATCTAGCAGCTCTGATCTA 57.511 40.000 12.53 5.37 0.00 1.98
5409 6575 7.912719 TCTACTATCTAGCAGCTCTGATCTAA 58.087 38.462 12.53 0.00 0.00 2.10
5410 6576 8.040727 TCTACTATCTAGCAGCTCTGATCTAAG 58.959 40.741 12.53 8.69 0.00 2.18
5411 6577 5.945784 ACTATCTAGCAGCTCTGATCTAAGG 59.054 44.000 12.53 4.82 0.00 2.69
5412 6578 4.445557 TCTAGCAGCTCTGATCTAAGGA 57.554 45.455 0.00 0.00 0.00 3.36
5413 6579 4.141287 TCTAGCAGCTCTGATCTAAGGAC 58.859 47.826 0.00 0.00 0.00 3.85
5414 6580 3.030873 AGCAGCTCTGATCTAAGGACT 57.969 47.619 0.29 0.00 0.00 3.85
5415 6581 2.694628 AGCAGCTCTGATCTAAGGACTG 59.305 50.000 0.29 0.00 0.00 3.51
5416 6582 2.224018 GCAGCTCTGATCTAAGGACTGG 60.224 54.545 0.29 0.00 0.00 4.00
5417 6583 2.364970 CAGCTCTGATCTAAGGACTGGG 59.635 54.545 0.00 0.00 0.00 4.45
5418 6584 1.069978 GCTCTGATCTAAGGACTGGGC 59.930 57.143 0.00 0.00 0.00 5.36
5419 6585 2.676748 CTCTGATCTAAGGACTGGGCT 58.323 52.381 0.00 0.00 0.00 5.19
5420 6586 2.627699 CTCTGATCTAAGGACTGGGCTC 59.372 54.545 0.00 0.00 0.00 4.70
5421 6587 2.023984 TCTGATCTAAGGACTGGGCTCA 60.024 50.000 0.00 0.00 0.00 4.26
5422 6588 2.768527 CTGATCTAAGGACTGGGCTCAA 59.231 50.000 0.00 0.00 0.00 3.02
5423 6589 3.181329 TGATCTAAGGACTGGGCTCAAA 58.819 45.455 0.00 0.00 0.00 2.69
5424 6590 3.782523 TGATCTAAGGACTGGGCTCAAAT 59.217 43.478 0.00 0.00 0.00 2.32
5425 6591 3.914426 TCTAAGGACTGGGCTCAAATC 57.086 47.619 0.00 0.00 0.00 2.17
5426 6592 3.454858 TCTAAGGACTGGGCTCAAATCT 58.545 45.455 0.00 0.00 0.00 2.40
5427 6593 4.620723 TCTAAGGACTGGGCTCAAATCTA 58.379 43.478 0.00 0.00 0.00 1.98
5428 6594 3.922171 AAGGACTGGGCTCAAATCTAG 57.078 47.619 0.00 0.00 0.00 2.43
5429 6595 2.122768 AGGACTGGGCTCAAATCTAGG 58.877 52.381 0.00 0.00 0.00 3.02
5430 6596 1.840635 GGACTGGGCTCAAATCTAGGT 59.159 52.381 0.00 0.00 0.00 3.08
5431 6597 2.158885 GGACTGGGCTCAAATCTAGGTC 60.159 54.545 0.00 0.00 0.00 3.85
5432 6598 1.840635 ACTGGGCTCAAATCTAGGTCC 59.159 52.381 0.00 0.00 0.00 4.46
5433 6599 1.839994 CTGGGCTCAAATCTAGGTCCA 59.160 52.381 0.00 0.00 0.00 4.02
5434 6600 1.839994 TGGGCTCAAATCTAGGTCCAG 59.160 52.381 0.00 0.00 0.00 3.86
5435 6601 2.119495 GGGCTCAAATCTAGGTCCAGA 58.881 52.381 0.00 0.00 0.00 3.86
5436 6602 2.158885 GGGCTCAAATCTAGGTCCAGAC 60.159 54.545 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 0.390472 GTGGCTGTCTAGTGTCTGCC 60.390 60.000 18.12 18.12 42.92 4.85
53 54 6.710744 AGTGAAAACCATACTCAAACTGTAGG 59.289 38.462 0.00 0.00 0.00 3.18
160 161 5.538433 TGAAATCAAAGGTGAAAAGGGGTAG 59.462 40.000 0.00 0.00 37.30 3.18
232 233 3.165875 AGGCTTTGAGTAGTAGCTGTGA 58.834 45.455 0.00 0.00 35.30 3.58
233 234 3.056536 TGAGGCTTTGAGTAGTAGCTGTG 60.057 47.826 0.00 0.00 35.30 3.66
235 236 3.516615 GTGAGGCTTTGAGTAGTAGCTG 58.483 50.000 0.00 0.00 35.30 4.24
236 237 2.498078 GGTGAGGCTTTGAGTAGTAGCT 59.502 50.000 0.00 0.00 35.30 3.32
237 238 2.735762 CGGTGAGGCTTTGAGTAGTAGC 60.736 54.545 0.00 0.00 0.00 3.58
329 330 3.279116 GCAGCGCAACAGTGTGGA 61.279 61.111 11.47 0.00 35.69 4.02
331 332 0.595567 AAATGCAGCGCAACAGTGTG 60.596 50.000 11.47 0.00 43.62 3.82
341 342 2.158449 GGAATATCTCGGAAATGCAGCG 59.842 50.000 0.00 0.00 0.00 5.18
386 387 3.318875 GCGGCAGCAACAAAAACC 58.681 55.556 3.18 0.00 44.35 3.27
401 402 2.745100 ATGCAGTGCAGTCCAGCG 60.745 61.111 24.20 0.00 43.65 5.18
430 431 8.883731 CATCAGAAGAAAAACTACGGACAATAT 58.116 33.333 0.00 0.00 0.00 1.28
431 432 7.333423 CCATCAGAAGAAAAACTACGGACAATA 59.667 37.037 0.00 0.00 0.00 1.90
432 433 6.149474 CCATCAGAAGAAAAACTACGGACAAT 59.851 38.462 0.00 0.00 0.00 2.71
436 437 4.564821 CCCCATCAGAAGAAAAACTACGGA 60.565 45.833 0.00 0.00 0.00 4.69
437 438 3.689649 CCCCATCAGAAGAAAAACTACGG 59.310 47.826 0.00 0.00 0.00 4.02
438 439 3.127030 GCCCCATCAGAAGAAAAACTACG 59.873 47.826 0.00 0.00 0.00 3.51
439 440 3.444034 GGCCCCATCAGAAGAAAAACTAC 59.556 47.826 0.00 0.00 0.00 2.73
441 442 2.158325 TGGCCCCATCAGAAGAAAAACT 60.158 45.455 0.00 0.00 0.00 2.66
443 444 2.692709 TGGCCCCATCAGAAGAAAAA 57.307 45.000 0.00 0.00 0.00 1.94
444 445 2.459644 CATGGCCCCATCAGAAGAAAA 58.540 47.619 0.00 0.00 33.90 2.29
445 446 1.961435 GCATGGCCCCATCAGAAGAAA 60.961 52.381 0.00 0.00 33.90 2.52
446 447 0.396139 GCATGGCCCCATCAGAAGAA 60.396 55.000 0.00 0.00 33.90 2.52
447 448 1.228228 GCATGGCCCCATCAGAAGA 59.772 57.895 0.00 0.00 33.90 2.87
449 450 2.279743 GGCATGGCCCCATCAGAA 59.720 61.111 8.35 0.00 44.06 3.02
459 460 1.188863 ACCTCATGAAAAGGCATGGC 58.811 50.000 12.14 12.14 44.44 4.40
460 461 3.967332 AAACCTCATGAAAAGGCATGG 57.033 42.857 0.00 0.00 44.44 3.66
463 464 3.069443 GGTGAAAACCTCATGAAAAGGCA 59.931 43.478 0.00 0.00 37.42 4.75
464 465 3.653344 GGTGAAAACCTCATGAAAAGGC 58.347 45.455 0.00 0.00 37.42 4.35
465 466 3.305335 CCGGTGAAAACCTCATGAAAAGG 60.305 47.826 0.00 0.00 36.14 3.11
466 467 3.568007 TCCGGTGAAAACCTCATGAAAAG 59.432 43.478 0.00 0.00 36.14 2.27
469 470 2.500229 GTCCGGTGAAAACCTCATGAA 58.500 47.619 0.00 0.00 36.14 2.57
470 471 1.271163 GGTCCGGTGAAAACCTCATGA 60.271 52.381 0.00 0.00 36.14 3.07
471 472 1.165270 GGTCCGGTGAAAACCTCATG 58.835 55.000 0.00 0.00 36.14 3.07
472 473 1.064825 AGGTCCGGTGAAAACCTCAT 58.935 50.000 5.96 0.00 39.17 2.90
474 475 1.520494 GAAGGTCCGGTGAAAACCTC 58.480 55.000 11.92 3.31 42.58 3.85
475 476 0.109913 GGAAGGTCCGGTGAAAACCT 59.890 55.000 5.96 5.96 45.32 3.50
477 478 1.232621 CGGGAAGGTCCGGTGAAAAC 61.233 60.000 0.00 0.00 45.78 2.43
686 1147 7.954835 TGCAAATTTTATATCTTCTCCATGGG 58.045 34.615 13.02 2.57 0.00 4.00
739 1202 8.035984 CACTAAGGTTTAGTAAGGAGGAAGAAG 58.964 40.741 1.50 0.00 0.00 2.85
740 1203 7.511714 ACACTAAGGTTTAGTAAGGAGGAAGAA 59.488 37.037 1.50 0.00 0.00 2.52
743 1206 6.783977 TCACACTAAGGTTTAGTAAGGAGGAA 59.216 38.462 1.50 0.00 0.00 3.36
752 1215 5.597182 TCTCACACTCACACTAAGGTTTAGT 59.403 40.000 0.00 0.00 0.00 2.24
753 1216 5.921408 GTCTCACACTCACACTAAGGTTTAG 59.079 44.000 0.00 0.00 0.00 1.85
754 1217 5.597182 AGTCTCACACTCACACTAAGGTTTA 59.403 40.000 0.00 0.00 0.00 2.01
755 1218 4.406003 AGTCTCACACTCACACTAAGGTTT 59.594 41.667 0.00 0.00 0.00 3.27
758 1221 3.570125 TCAGTCTCACACTCACACTAAGG 59.430 47.826 0.00 0.00 30.26 2.69
760 1223 4.036852 CACTCAGTCTCACACTCACACTAA 59.963 45.833 0.00 0.00 30.26 2.24
838 1320 4.654262 TGTTGGAAGGGTAGATAGATGGAC 59.346 45.833 0.00 0.00 0.00 4.02
946 1432 1.135373 TCGACGAACAGATCAAGAGGC 60.135 52.381 0.00 0.00 0.00 4.70
997 1483 0.323178 CCCATATCAGGAGGCATGCC 60.323 60.000 30.12 30.12 0.00 4.40
1599 2205 3.625897 CCACCACGGAGCACCTCA 61.626 66.667 0.00 0.00 36.56 3.86
1611 2217 2.124109 TTCTTGTTGCCGCCACCA 60.124 55.556 0.00 0.00 0.00 4.17
1614 2220 1.896660 GAGGTTCTTGTTGCCGCCA 60.897 57.895 0.00 0.00 0.00 5.69
2115 2721 1.040646 TCTGGTTGTTGTCGAGCTCT 58.959 50.000 12.85 0.00 0.00 4.09
2442 3192 2.768492 GCCAAGCTTGCCGATCTGG 61.768 63.158 21.43 6.69 42.50 3.86
2545 3295 3.414700 GTTGCCGTGCAGGTCGAG 61.415 66.667 5.57 0.00 40.61 4.04
3243 4252 2.266055 GCGTCCTTGTCCTCCTGG 59.734 66.667 0.00 0.00 0.00 4.45
3245 4254 3.382832 CGGCGTCCTTGTCCTCCT 61.383 66.667 0.00 0.00 0.00 3.69
3861 4906 3.703052 GGAATTCTGTGGCTGAAATGGAT 59.297 43.478 5.23 0.00 0.00 3.41
3891 4985 2.102757 TGACAGCAAAAGTACGGTGGTA 59.897 45.455 0.00 0.00 34.96 3.25
3894 4988 2.210116 ACTGACAGCAAAAGTACGGTG 58.790 47.619 1.25 0.00 36.70 4.94
3895 4989 2.614829 ACTGACAGCAAAAGTACGGT 57.385 45.000 1.25 0.00 0.00 4.83
3897 4991 4.743151 TCACTAACTGACAGCAAAAGTACG 59.257 41.667 1.25 0.00 0.00 3.67
4558 5699 3.922640 CGAGGCTAGCTCCTGGGC 61.923 72.222 15.72 0.00 36.38 5.36
4577 5722 1.987855 GTCGATCCCACCCTGTCCA 60.988 63.158 0.00 0.00 0.00 4.02
4650 5795 0.812014 TGTGTTGCTGTGGTACGTGG 60.812 55.000 0.00 0.00 0.00 4.94
4690 5838 1.603802 CAGGCGTTGGCTATGGTATTG 59.396 52.381 0.00 0.00 36.44 1.90
4779 5929 1.293179 CCAGATCACAGTCACGCCA 59.707 57.895 0.00 0.00 0.00 5.69
4865 6025 0.730265 TAAACATGATTGCCCGTCGC 59.270 50.000 0.00 0.00 38.31 5.19
4866 6026 3.064682 TGATTAAACATGATTGCCCGTCG 59.935 43.478 0.00 0.00 0.00 5.12
4867 6027 4.630894 TGATTAAACATGATTGCCCGTC 57.369 40.909 0.00 0.00 0.00 4.79
4878 6038 4.584874 TCACCGGTCACATGATTAAACAT 58.415 39.130 2.59 0.00 0.00 2.71
4879 6039 4.009370 TCACCGGTCACATGATTAAACA 57.991 40.909 2.59 0.00 0.00 2.83
4880 6040 5.560966 AATCACCGGTCACATGATTAAAC 57.439 39.130 13.86 0.00 40.44 2.01
4881 6041 5.475220 ACAAATCACCGGTCACATGATTAAA 59.525 36.000 15.34 0.00 41.17 1.52
4882 6042 5.007034 ACAAATCACCGGTCACATGATTAA 58.993 37.500 15.34 0.00 41.17 1.40
4883 6043 4.584874 ACAAATCACCGGTCACATGATTA 58.415 39.130 15.34 0.00 41.17 1.75
5013 6179 1.595382 CAGTATGTGCCGCCTAGCC 60.595 63.158 0.00 0.00 0.00 3.93
5024 6190 6.607004 AGTAACCTACAGAAAGCAGTATGT 57.393 37.500 0.00 0.00 39.31 2.29
5025 6191 7.773149 AGTAGTAACCTACAGAAAGCAGTATG 58.227 38.462 3.01 0.00 45.06 2.39
5039 6205 8.529952 TTATAGGATGAGGGAGTAGTAACCTA 57.470 38.462 0.00 0.00 34.02 3.08
5056 6222 8.258708 GTCAAAAGGCGTCCTATATTATAGGAT 58.741 37.037 27.47 14.15 44.67 3.24
5057 6223 7.310237 GGTCAAAAGGCGTCCTATATTATAGGA 60.310 40.741 23.13 23.13 41.14 2.94
5058 6224 6.817140 GGTCAAAAGGCGTCCTATATTATAGG 59.183 42.308 19.81 19.81 31.13 2.57
5059 6225 7.612677 AGGTCAAAAGGCGTCCTATATTATAG 58.387 38.462 4.02 4.02 31.13 1.31
5060 6226 7.549147 AGGTCAAAAGGCGTCCTATATTATA 57.451 36.000 0.00 0.00 31.13 0.98
5061 6227 6.435292 AGGTCAAAAGGCGTCCTATATTAT 57.565 37.500 0.00 0.00 31.13 1.28
5062 6228 5.881923 AGGTCAAAAGGCGTCCTATATTA 57.118 39.130 0.00 0.00 31.13 0.98
5063 6229 4.772886 AGGTCAAAAGGCGTCCTATATT 57.227 40.909 0.00 0.00 31.13 1.28
5064 6230 4.900054 AGTAGGTCAAAAGGCGTCCTATAT 59.100 41.667 0.00 0.00 34.06 0.86
5065 6231 4.098960 CAGTAGGTCAAAAGGCGTCCTATA 59.901 45.833 0.00 0.00 34.06 1.31
5066 6232 3.105283 AGTAGGTCAAAAGGCGTCCTAT 58.895 45.455 0.00 0.00 34.06 2.57
5067 6233 2.232941 CAGTAGGTCAAAAGGCGTCCTA 59.767 50.000 0.00 0.00 31.13 2.94
5068 6234 1.002087 CAGTAGGTCAAAAGGCGTCCT 59.998 52.381 0.00 0.00 33.87 3.85
5069 6235 1.270678 ACAGTAGGTCAAAAGGCGTCC 60.271 52.381 0.00 0.00 0.00 4.79
5070 6236 2.165319 ACAGTAGGTCAAAAGGCGTC 57.835 50.000 0.00 0.00 0.00 5.19
5071 6237 2.631545 ACTACAGTAGGTCAAAAGGCGT 59.368 45.455 12.42 0.00 0.00 5.68
5072 6238 2.993899 CACTACAGTAGGTCAAAAGGCG 59.006 50.000 12.42 0.00 0.00 5.52
5073 6239 3.995048 GACACTACAGTAGGTCAAAAGGC 59.005 47.826 12.42 0.00 0.00 4.35
5074 6240 4.989168 GTGACACTACAGTAGGTCAAAAGG 59.011 45.833 23.09 4.39 37.56 3.11
5075 6241 5.597806 TGTGACACTACAGTAGGTCAAAAG 58.402 41.667 23.09 5.69 37.56 2.27
5076 6242 5.601583 TGTGACACTACAGTAGGTCAAAA 57.398 39.130 23.09 15.99 37.56 2.44
5077 6243 5.601583 TTGTGACACTACAGTAGGTCAAA 57.398 39.130 23.09 18.61 37.56 2.69
5078 6244 5.601583 TTTGTGACACTACAGTAGGTCAA 57.398 39.130 23.09 15.18 37.56 3.18
5079 6245 5.353938 GTTTTGTGACACTACAGTAGGTCA 58.646 41.667 19.91 19.91 35.26 4.02
5080 6246 4.443394 CGTTTTGTGACACTACAGTAGGTC 59.557 45.833 12.42 14.94 0.00 3.85
5081 6247 4.142093 ACGTTTTGTGACACTACAGTAGGT 60.142 41.667 12.42 6.94 0.00 3.08
5082 6248 4.365723 ACGTTTTGTGACACTACAGTAGG 58.634 43.478 12.42 3.85 0.00 3.18
5083 6249 5.279384 AGACGTTTTGTGACACTACAGTAG 58.721 41.667 7.20 6.00 0.00 2.57
5084 6250 5.252969 AGACGTTTTGTGACACTACAGTA 57.747 39.130 7.20 0.00 0.00 2.74
5085 6251 4.119442 AGACGTTTTGTGACACTACAGT 57.881 40.909 7.20 0.94 0.00 3.55
5086 6252 6.200286 ACATAAGACGTTTTGTGACACTACAG 59.800 38.462 19.98 0.00 0.00 2.74
5087 6253 6.044046 ACATAAGACGTTTTGTGACACTACA 58.956 36.000 19.98 0.00 0.00 2.74
5088 6254 6.520792 ACATAAGACGTTTTGTGACACTAC 57.479 37.500 19.98 2.01 0.00 2.73
5089 6255 8.821147 ATAACATAAGACGTTTTGTGACACTA 57.179 30.769 19.98 7.79 29.36 2.74
5090 6256 7.724305 ATAACATAAGACGTTTTGTGACACT 57.276 32.000 19.98 6.17 29.36 3.55
5091 6257 8.166706 CCTATAACATAAGACGTTTTGTGACAC 58.833 37.037 19.98 0.00 29.36 3.67
5092 6258 8.089597 TCCTATAACATAAGACGTTTTGTGACA 58.910 33.333 19.98 8.83 29.36 3.58
5093 6259 8.378421 GTCCTATAACATAAGACGTTTTGTGAC 58.622 37.037 19.98 4.54 29.36 3.67
5094 6260 7.274033 CGTCCTATAACATAAGACGTTTTGTGA 59.726 37.037 19.98 1.60 43.89 3.58
5095 6261 7.388712 CGTCCTATAACATAAGACGTTTTGTG 58.611 38.462 13.00 13.00 43.89 3.33
5096 6262 6.532657 CCGTCCTATAACATAAGACGTTTTGT 59.467 38.462 13.39 0.00 46.62 2.83
5097 6263 6.753279 TCCGTCCTATAACATAAGACGTTTTG 59.247 38.462 13.39 0.00 46.62 2.44
5098 6264 6.866480 TCCGTCCTATAACATAAGACGTTTT 58.134 36.000 13.39 0.00 46.62 2.43
5099 6265 6.455360 TCCGTCCTATAACATAAGACGTTT 57.545 37.500 13.39 0.00 46.62 3.60
5100 6266 5.009410 CCTCCGTCCTATAACATAAGACGTT 59.991 44.000 13.39 0.00 46.62 3.99
5101 6267 4.518211 CCTCCGTCCTATAACATAAGACGT 59.482 45.833 13.39 0.00 46.62 4.34
5103 6269 5.075493 TCCCTCCGTCCTATAACATAAGAC 58.925 45.833 0.00 0.00 0.00 3.01
5104 6270 5.163012 ACTCCCTCCGTCCTATAACATAAGA 60.163 44.000 0.00 0.00 0.00 2.10
5105 6271 5.078256 ACTCCCTCCGTCCTATAACATAAG 58.922 45.833 0.00 0.00 0.00 1.73
5106 6272 5.070823 ACTCCCTCCGTCCTATAACATAA 57.929 43.478 0.00 0.00 0.00 1.90
5107 6273 4.736611 ACTCCCTCCGTCCTATAACATA 57.263 45.455 0.00 0.00 0.00 2.29
5108 6274 3.614568 ACTCCCTCCGTCCTATAACAT 57.385 47.619 0.00 0.00 0.00 2.71
5109 6275 3.461085 ACTACTCCCTCCGTCCTATAACA 59.539 47.826 0.00 0.00 0.00 2.41
5110 6276 4.097551 ACTACTCCCTCCGTCCTATAAC 57.902 50.000 0.00 0.00 0.00 1.89
5111 6277 5.912149 TTACTACTCCCTCCGTCCTATAA 57.088 43.478 0.00 0.00 0.00 0.98
5112 6278 5.549228 TCATTACTACTCCCTCCGTCCTATA 59.451 44.000 0.00 0.00 0.00 1.31
5113 6279 4.353191 TCATTACTACTCCCTCCGTCCTAT 59.647 45.833 0.00 0.00 0.00 2.57
5114 6280 3.718434 TCATTACTACTCCCTCCGTCCTA 59.282 47.826 0.00 0.00 0.00 2.94
5115 6281 2.512896 TCATTACTACTCCCTCCGTCCT 59.487 50.000 0.00 0.00 0.00 3.85
5116 6282 2.885894 CTCATTACTACTCCCTCCGTCC 59.114 54.545 0.00 0.00 0.00 4.79
5117 6283 2.293955 GCTCATTACTACTCCCTCCGTC 59.706 54.545 0.00 0.00 0.00 4.79
5118 6284 2.308690 GCTCATTACTACTCCCTCCGT 58.691 52.381 0.00 0.00 0.00 4.69
5119 6285 1.267261 CGCTCATTACTACTCCCTCCG 59.733 57.143 0.00 0.00 0.00 4.63
5120 6286 2.034812 CACGCTCATTACTACTCCCTCC 59.965 54.545 0.00 0.00 0.00 4.30
5121 6287 2.950309 TCACGCTCATTACTACTCCCTC 59.050 50.000 0.00 0.00 0.00 4.30
5122 6288 3.014304 TCACGCTCATTACTACTCCCT 57.986 47.619 0.00 0.00 0.00 4.20
5123 6289 3.795623 TTCACGCTCATTACTACTCCC 57.204 47.619 0.00 0.00 0.00 4.30
5124 6290 6.663944 AAATTTCACGCTCATTACTACTCC 57.336 37.500 0.00 0.00 0.00 3.85
5125 6291 8.488764 GGATAAATTTCACGCTCATTACTACTC 58.511 37.037 0.00 0.00 0.00 2.59
5126 6292 8.204836 AGGATAAATTTCACGCTCATTACTACT 58.795 33.333 0.00 0.00 0.00 2.57
5127 6293 8.366671 AGGATAAATTTCACGCTCATTACTAC 57.633 34.615 0.00 0.00 0.00 2.73
5128 6294 8.958119 AAGGATAAATTTCACGCTCATTACTA 57.042 30.769 0.00 0.00 0.00 1.82
5129 6295 7.865706 AAGGATAAATTTCACGCTCATTACT 57.134 32.000 0.00 0.00 0.00 2.24
5130 6296 9.651718 CTAAAGGATAAATTTCACGCTCATTAC 57.348 33.333 0.00 0.00 0.00 1.89
5131 6297 8.836413 CCTAAAGGATAAATTTCACGCTCATTA 58.164 33.333 0.00 0.00 37.39 1.90
5132 6298 7.682021 GCCTAAAGGATAAATTTCACGCTCATT 60.682 37.037 0.00 0.00 37.39 2.57
5133 6299 6.238759 GCCTAAAGGATAAATTTCACGCTCAT 60.239 38.462 0.00 0.00 37.39 2.90
5134 6300 5.065988 GCCTAAAGGATAAATTTCACGCTCA 59.934 40.000 0.00 0.00 37.39 4.26
5135 6301 5.505819 GGCCTAAAGGATAAATTTCACGCTC 60.506 44.000 0.00 0.00 37.39 5.03
5136 6302 4.338400 GGCCTAAAGGATAAATTTCACGCT 59.662 41.667 0.00 0.00 37.39 5.07
5137 6303 4.097286 TGGCCTAAAGGATAAATTTCACGC 59.903 41.667 3.32 0.00 37.39 5.34
5138 6304 5.221048 CCTGGCCTAAAGGATAAATTTCACG 60.221 44.000 3.32 0.00 36.91 4.35
5139 6305 5.451937 GCCTGGCCTAAAGGATAAATTTCAC 60.452 44.000 11.80 0.00 36.91 3.18
5140 6306 4.649218 GCCTGGCCTAAAGGATAAATTTCA 59.351 41.667 11.80 0.00 36.91 2.69
5141 6307 4.039245 GGCCTGGCCTAAAGGATAAATTTC 59.961 45.833 30.42 0.00 46.69 2.17
5142 6308 3.967326 GGCCTGGCCTAAAGGATAAATTT 59.033 43.478 30.42 0.00 46.69 1.82
5143 6309 3.576861 GGCCTGGCCTAAAGGATAAATT 58.423 45.455 30.42 0.00 46.69 1.82
5144 6310 3.244887 GGCCTGGCCTAAAGGATAAAT 57.755 47.619 30.42 0.00 46.69 1.40
5145 6311 2.748209 GGCCTGGCCTAAAGGATAAA 57.252 50.000 30.42 0.00 46.69 1.40
5228 6394 9.528489 AGAGGTGGCTTTCTTTTATATTGTTAA 57.472 29.630 0.00 0.00 0.00 2.01
5229 6395 9.528489 AAGAGGTGGCTTTCTTTTATATTGTTA 57.472 29.630 0.00 0.00 29.64 2.41
5230 6396 8.422577 AAGAGGTGGCTTTCTTTTATATTGTT 57.577 30.769 0.00 0.00 29.64 2.83
5231 6397 7.148239 CGAAGAGGTGGCTTTCTTTTATATTGT 60.148 37.037 1.46 0.00 33.97 2.71
5232 6398 7.065803 TCGAAGAGGTGGCTTTCTTTTATATTG 59.934 37.037 0.00 0.00 33.97 1.90
5233 6399 7.110155 TCGAAGAGGTGGCTTTCTTTTATATT 58.890 34.615 0.00 0.00 33.97 1.28
5234 6400 6.650120 TCGAAGAGGTGGCTTTCTTTTATAT 58.350 36.000 0.00 0.00 33.97 0.86
5235 6401 6.045072 TCGAAGAGGTGGCTTTCTTTTATA 57.955 37.500 0.00 0.00 33.97 0.98
5236 6402 4.906618 TCGAAGAGGTGGCTTTCTTTTAT 58.093 39.130 0.00 0.00 33.97 1.40
5237 6403 4.345859 TCGAAGAGGTGGCTTTCTTTTA 57.654 40.909 0.00 0.00 33.97 1.52
5238 6404 3.208747 TCGAAGAGGTGGCTTTCTTTT 57.791 42.857 0.00 0.00 33.97 2.27
5239 6405 2.930826 TCGAAGAGGTGGCTTTCTTT 57.069 45.000 0.00 0.00 33.97 2.52
5240 6406 3.425162 AATCGAAGAGGTGGCTTTCTT 57.575 42.857 0.00 0.00 43.63 2.52
5241 6407 3.339141 GAAATCGAAGAGGTGGCTTTCT 58.661 45.455 0.00 0.00 43.63 2.52
5242 6408 2.420372 GGAAATCGAAGAGGTGGCTTTC 59.580 50.000 0.00 0.00 43.63 2.62
5243 6409 2.224769 TGGAAATCGAAGAGGTGGCTTT 60.225 45.455 0.00 0.00 43.63 3.51
5244 6410 1.351017 TGGAAATCGAAGAGGTGGCTT 59.649 47.619 0.00 0.00 43.63 4.35
5245 6411 0.984230 TGGAAATCGAAGAGGTGGCT 59.016 50.000 0.00 0.00 43.63 4.75
5246 6412 2.044123 ATGGAAATCGAAGAGGTGGC 57.956 50.000 0.00 0.00 43.63 5.01
5247 6413 4.770795 AGTAATGGAAATCGAAGAGGTGG 58.229 43.478 0.00 0.00 43.63 4.61
5248 6414 6.806751 TCTAGTAATGGAAATCGAAGAGGTG 58.193 40.000 0.00 0.00 43.63 4.00
5249 6415 7.419711 TTCTAGTAATGGAAATCGAAGAGGT 57.580 36.000 0.00 0.00 43.63 3.85
5250 6416 8.894768 ATTTCTAGTAATGGAAATCGAAGAGG 57.105 34.615 8.49 0.00 43.63 3.69
5258 6424 7.349598 ACCTGCTGATTTCTAGTAATGGAAAT 58.650 34.615 13.41 13.41 42.53 2.17
5259 6425 6.721318 ACCTGCTGATTTCTAGTAATGGAAA 58.279 36.000 4.15 4.15 36.17 3.13
5260 6426 6.313519 ACCTGCTGATTTCTAGTAATGGAA 57.686 37.500 0.00 0.00 0.00 3.53
5261 6427 5.957771 ACCTGCTGATTTCTAGTAATGGA 57.042 39.130 0.00 0.00 0.00 3.41
5262 6428 6.352516 AGAACCTGCTGATTTCTAGTAATGG 58.647 40.000 0.00 0.00 0.00 3.16
5263 6429 7.856145 AAGAACCTGCTGATTTCTAGTAATG 57.144 36.000 0.00 0.00 0.00 1.90
5264 6430 8.540388 TGTAAGAACCTGCTGATTTCTAGTAAT 58.460 33.333 7.53 0.00 0.00 1.89
5265 6431 7.817962 GTGTAAGAACCTGCTGATTTCTAGTAA 59.182 37.037 7.53 0.00 0.00 2.24
5266 6432 7.321153 GTGTAAGAACCTGCTGATTTCTAGTA 58.679 38.462 7.53 0.00 0.00 1.82
5267 6433 6.166982 GTGTAAGAACCTGCTGATTTCTAGT 58.833 40.000 7.53 0.00 0.00 2.57
5268 6434 5.582665 GGTGTAAGAACCTGCTGATTTCTAG 59.417 44.000 7.53 0.00 37.24 2.43
5269 6435 5.012664 TGGTGTAAGAACCTGCTGATTTCTA 59.987 40.000 7.53 0.00 41.16 2.10
5270 6436 4.202461 TGGTGTAAGAACCTGCTGATTTCT 60.202 41.667 0.00 0.00 41.16 2.52
5271 6437 4.072131 TGGTGTAAGAACCTGCTGATTTC 58.928 43.478 0.00 0.00 41.16 2.17
5272 6438 4.098914 TGGTGTAAGAACCTGCTGATTT 57.901 40.909 0.00 0.00 41.16 2.17
5273 6439 3.788227 TGGTGTAAGAACCTGCTGATT 57.212 42.857 0.00 0.00 41.16 2.57
5274 6440 3.264193 TGATGGTGTAAGAACCTGCTGAT 59.736 43.478 0.00 0.00 41.16 2.90
5275 6441 2.637382 TGATGGTGTAAGAACCTGCTGA 59.363 45.455 0.00 0.00 41.16 4.26
5276 6442 3.057969 TGATGGTGTAAGAACCTGCTG 57.942 47.619 0.00 0.00 41.16 4.41
5277 6443 3.788227 TTGATGGTGTAAGAACCTGCT 57.212 42.857 0.00 0.00 41.16 4.24
5278 6444 4.846779 TTTTGATGGTGTAAGAACCTGC 57.153 40.909 0.00 0.00 41.16 4.85
5279 6445 8.279970 TCATATTTTGATGGTGTAAGAACCTG 57.720 34.615 0.00 0.00 41.16 4.00
5280 6446 8.877864 TTCATATTTTGATGGTGTAAGAACCT 57.122 30.769 0.00 0.00 41.16 3.50
5281 6447 9.921637 TTTTCATATTTTGATGGTGTAAGAACC 57.078 29.630 0.00 0.00 40.94 3.62
5302 6468 9.528018 CAAGGTTAAAGCTTTGTTATCTTTTCA 57.472 29.630 22.02 0.00 32.99 2.69
5303 6469 8.487970 GCAAGGTTAAAGCTTTGTTATCTTTTC 58.512 33.333 22.02 8.74 32.99 2.29
5304 6470 7.984617 TGCAAGGTTAAAGCTTTGTTATCTTTT 59.015 29.630 22.02 2.97 32.99 2.27
5305 6471 7.496747 TGCAAGGTTAAAGCTTTGTTATCTTT 58.503 30.769 22.02 7.09 32.99 2.52
5306 6472 7.049799 TGCAAGGTTAAAGCTTTGTTATCTT 57.950 32.000 22.02 14.48 32.99 2.40
5307 6473 6.648879 TGCAAGGTTAAAGCTTTGTTATCT 57.351 33.333 22.02 9.49 32.99 1.98
5308 6474 7.315890 AGATGCAAGGTTAAAGCTTTGTTATC 58.684 34.615 22.02 11.79 32.99 1.75
5309 6475 7.232118 AGATGCAAGGTTAAAGCTTTGTTAT 57.768 32.000 22.02 2.60 32.99 1.89
5310 6476 6.648879 AGATGCAAGGTTAAAGCTTTGTTA 57.351 33.333 22.02 4.26 32.99 2.41
5311 6477 5.535753 AGATGCAAGGTTAAAGCTTTGTT 57.464 34.783 22.02 6.98 32.99 2.83
5312 6478 6.648879 TTAGATGCAAGGTTAAAGCTTTGT 57.351 33.333 22.02 0.00 32.99 2.83
5313 6479 5.574443 GCTTAGATGCAAGGTTAAAGCTTTG 59.426 40.000 22.02 5.56 32.99 2.77
5314 6480 5.243730 TGCTTAGATGCAAGGTTAAAGCTTT 59.756 36.000 17.30 17.30 40.29 3.51
5315 6481 4.766891 TGCTTAGATGCAAGGTTAAAGCTT 59.233 37.500 15.69 0.00 40.29 3.74
5316 6482 4.335416 TGCTTAGATGCAAGGTTAAAGCT 58.665 39.130 15.69 0.00 40.29 3.74
5317 6483 4.666237 CTGCTTAGATGCAAGGTTAAAGC 58.334 43.478 0.00 1.48 42.83 3.51
5318 6484 4.397417 AGCTGCTTAGATGCAAGGTTAAAG 59.603 41.667 0.00 0.00 42.83 1.85
5319 6485 4.335416 AGCTGCTTAGATGCAAGGTTAAA 58.665 39.130 0.00 0.00 42.83 1.52
5320 6486 3.955471 AGCTGCTTAGATGCAAGGTTAA 58.045 40.909 0.00 0.00 42.83 2.01
5321 6487 3.634397 AGCTGCTTAGATGCAAGGTTA 57.366 42.857 0.00 0.00 42.83 2.85
5322 6488 2.503895 AGCTGCTTAGATGCAAGGTT 57.496 45.000 0.00 0.00 42.83 3.50
5323 6489 3.634397 TTAGCTGCTTAGATGCAAGGT 57.366 42.857 7.79 0.00 42.83 3.50
5324 6490 4.732938 GCTTTTAGCTGCTTAGATGCAAGG 60.733 45.833 7.79 0.00 42.83 3.61
5325 6491 4.349501 GCTTTTAGCTGCTTAGATGCAAG 58.650 43.478 7.79 0.00 42.83 4.01
5326 6492 3.181507 CGCTTTTAGCTGCTTAGATGCAA 60.182 43.478 7.79 0.00 42.83 4.08
5327 6493 2.352651 CGCTTTTAGCTGCTTAGATGCA 59.647 45.455 7.79 0.00 39.60 3.96
5328 6494 2.609459 TCGCTTTTAGCTGCTTAGATGC 59.391 45.455 7.79 7.34 39.60 3.91
5329 6495 5.463392 TGTATCGCTTTTAGCTGCTTAGATG 59.537 40.000 7.79 0.74 39.60 2.90
5330 6496 5.601662 TGTATCGCTTTTAGCTGCTTAGAT 58.398 37.500 7.79 6.91 39.60 1.98
5331 6497 5.006153 TGTATCGCTTTTAGCTGCTTAGA 57.994 39.130 7.79 0.00 39.60 2.10
5332 6498 4.210120 CCTGTATCGCTTTTAGCTGCTTAG 59.790 45.833 7.79 4.63 39.60 2.18
5333 6499 4.119862 CCTGTATCGCTTTTAGCTGCTTA 58.880 43.478 7.79 0.00 39.60 3.09
5334 6500 2.939103 CCTGTATCGCTTTTAGCTGCTT 59.061 45.455 7.79 0.00 39.60 3.91
5335 6501 2.168521 TCCTGTATCGCTTTTAGCTGCT 59.831 45.455 7.57 7.57 39.60 4.24
5336 6502 2.541762 CTCCTGTATCGCTTTTAGCTGC 59.458 50.000 0.00 0.00 39.60 5.25
5337 6503 3.786635 ACTCCTGTATCGCTTTTAGCTG 58.213 45.455 0.00 0.00 39.60 4.24
5338 6504 4.038162 CCTACTCCTGTATCGCTTTTAGCT 59.962 45.833 0.00 0.00 39.60 3.32
5339 6505 4.037684 TCCTACTCCTGTATCGCTTTTAGC 59.962 45.833 0.00 0.00 38.02 3.09
5340 6506 5.764131 CTCCTACTCCTGTATCGCTTTTAG 58.236 45.833 0.00 0.00 0.00 1.85
5341 6507 4.037684 GCTCCTACTCCTGTATCGCTTTTA 59.962 45.833 0.00 0.00 0.00 1.52
5342 6508 3.181474 GCTCCTACTCCTGTATCGCTTTT 60.181 47.826 0.00 0.00 0.00 2.27
5343 6509 2.362717 GCTCCTACTCCTGTATCGCTTT 59.637 50.000 0.00 0.00 0.00 3.51
5344 6510 1.957877 GCTCCTACTCCTGTATCGCTT 59.042 52.381 0.00 0.00 0.00 4.68
5345 6511 1.611519 GCTCCTACTCCTGTATCGCT 58.388 55.000 0.00 0.00 0.00 4.93
5346 6512 0.599060 GGCTCCTACTCCTGTATCGC 59.401 60.000 0.00 0.00 0.00 4.58
5347 6513 1.982660 TGGCTCCTACTCCTGTATCG 58.017 55.000 0.00 0.00 0.00 2.92
5348 6514 2.829120 GGATGGCTCCTACTCCTGTATC 59.171 54.545 0.00 0.00 38.65 2.24
5349 6515 2.493687 GGGATGGCTCCTACTCCTGTAT 60.494 54.545 3.54 0.00 41.74 2.29
5350 6516 1.133136 GGGATGGCTCCTACTCCTGTA 60.133 57.143 3.54 0.00 41.74 2.74
5351 6517 0.399233 GGGATGGCTCCTACTCCTGT 60.399 60.000 3.54 0.00 41.74 4.00
5352 6518 0.105246 AGGGATGGCTCCTACTCCTG 60.105 60.000 3.54 0.00 41.74 3.86
5353 6519 0.189822 GAGGGATGGCTCCTACTCCT 59.810 60.000 3.54 0.00 41.74 3.69
5354 6520 0.834261 GGAGGGATGGCTCCTACTCC 60.834 65.000 0.00 10.29 40.60 3.85
5355 6521 0.834261 GGGAGGGATGGCTCCTACTC 60.834 65.000 0.00 0.00 41.74 2.59
5356 6522 1.237458 GGGAGGGATGGCTCCTACT 59.763 63.158 0.00 0.00 41.74 2.57
5357 6523 1.074471 TGGGAGGGATGGCTCCTAC 60.074 63.158 0.00 0.39 41.74 3.18
5358 6524 1.074471 GTGGGAGGGATGGCTCCTA 60.074 63.158 0.00 0.00 41.74 2.94
5359 6525 2.367512 GTGGGAGGGATGGCTCCT 60.368 66.667 0.00 0.00 41.74 3.69
5360 6526 3.493303 GGTGGGAGGGATGGCTCC 61.493 72.222 0.00 0.00 41.26 4.70
5361 6527 3.493303 GGGTGGGAGGGATGGCTC 61.493 72.222 0.00 0.00 0.00 4.70
5362 6528 2.208562 TAAGGGTGGGAGGGATGGCT 62.209 60.000 0.00 0.00 0.00 4.75
5363 6529 1.696314 TAAGGGTGGGAGGGATGGC 60.696 63.158 0.00 0.00 0.00 4.40
5364 6530 0.623324 TGTAAGGGTGGGAGGGATGG 60.623 60.000 0.00 0.00 0.00 3.51
5365 6531 1.421646 GATGTAAGGGTGGGAGGGATG 59.578 57.143 0.00 0.00 0.00 3.51
5366 6532 1.298382 AGATGTAAGGGTGGGAGGGAT 59.702 52.381 0.00 0.00 0.00 3.85
5367 6533 0.722676 AGATGTAAGGGTGGGAGGGA 59.277 55.000 0.00 0.00 0.00 4.20
5368 6534 2.047830 GTAGATGTAAGGGTGGGAGGG 58.952 57.143 0.00 0.00 0.00 4.30
5369 6535 3.047695 AGTAGATGTAAGGGTGGGAGG 57.952 52.381 0.00 0.00 0.00 4.30
5370 6536 5.646215 AGATAGTAGATGTAAGGGTGGGAG 58.354 45.833 0.00 0.00 0.00 4.30
5371 6537 5.681494 AGATAGTAGATGTAAGGGTGGGA 57.319 43.478 0.00 0.00 0.00 4.37
5372 6538 5.419471 GCTAGATAGTAGATGTAAGGGTGGG 59.581 48.000 0.00 0.00 0.00 4.61
5373 6539 6.010850 TGCTAGATAGTAGATGTAAGGGTGG 58.989 44.000 0.00 0.00 0.00 4.61
5374 6540 6.349777 GCTGCTAGATAGTAGATGTAAGGGTG 60.350 46.154 8.90 0.00 38.14 4.61
5375 6541 5.712917 GCTGCTAGATAGTAGATGTAAGGGT 59.287 44.000 8.90 0.00 38.14 4.34
5376 6542 5.949354 AGCTGCTAGATAGTAGATGTAAGGG 59.051 44.000 0.00 0.00 38.14 3.95
5377 6543 6.884295 AGAGCTGCTAGATAGTAGATGTAAGG 59.116 42.308 0.15 0.00 38.14 2.69
5378 6544 7.606073 TCAGAGCTGCTAGATAGTAGATGTAAG 59.394 40.741 0.15 0.00 38.14 2.34
5379 6545 7.454225 TCAGAGCTGCTAGATAGTAGATGTAA 58.546 38.462 0.15 0.00 38.14 2.41
5380 6546 7.010339 TCAGAGCTGCTAGATAGTAGATGTA 57.990 40.000 0.15 0.00 38.14 2.29
5381 6547 5.875224 TCAGAGCTGCTAGATAGTAGATGT 58.125 41.667 0.15 0.00 38.14 3.06
5382 6548 6.825213 AGATCAGAGCTGCTAGATAGTAGATG 59.175 42.308 14.68 4.65 38.14 2.90
5383 6549 6.962182 AGATCAGAGCTGCTAGATAGTAGAT 58.038 40.000 14.68 2.41 38.14 1.98
5384 6550 6.373005 AGATCAGAGCTGCTAGATAGTAGA 57.627 41.667 14.68 1.11 38.14 2.59
5385 6551 7.280876 CCTTAGATCAGAGCTGCTAGATAGTAG 59.719 44.444 14.68 11.75 38.80 2.57
5386 6552 7.037945 TCCTTAGATCAGAGCTGCTAGATAGTA 60.038 40.741 14.68 8.64 0.00 1.82
5387 6553 5.945784 CCTTAGATCAGAGCTGCTAGATAGT 59.054 44.000 14.68 9.38 0.00 2.12
5388 6554 6.094048 GTCCTTAGATCAGAGCTGCTAGATAG 59.906 46.154 14.68 9.99 0.00 2.08
5389 6555 5.943416 GTCCTTAGATCAGAGCTGCTAGATA 59.057 44.000 14.68 1.36 0.00 1.98
5390 6556 4.766891 GTCCTTAGATCAGAGCTGCTAGAT 59.233 45.833 14.63 14.63 0.00 1.98
5391 6557 4.141274 AGTCCTTAGATCAGAGCTGCTAGA 60.141 45.833 0.15 4.24 0.00 2.43
5392 6558 4.022935 CAGTCCTTAGATCAGAGCTGCTAG 60.023 50.000 0.15 0.00 0.00 3.42
5393 6559 3.888323 CAGTCCTTAGATCAGAGCTGCTA 59.112 47.826 0.15 0.00 0.00 3.49
5394 6560 2.694628 CAGTCCTTAGATCAGAGCTGCT 59.305 50.000 0.00 0.00 0.00 4.24
5395 6561 2.224018 CCAGTCCTTAGATCAGAGCTGC 60.224 54.545 0.00 0.00 0.00 5.25
5396 6562 2.364970 CCCAGTCCTTAGATCAGAGCTG 59.635 54.545 0.00 0.00 0.00 4.24
5397 6563 2.676748 CCCAGTCCTTAGATCAGAGCT 58.323 52.381 0.00 0.00 0.00 4.09
5398 6564 1.069978 GCCCAGTCCTTAGATCAGAGC 59.930 57.143 0.00 0.00 0.00 4.09
5399 6565 2.627699 GAGCCCAGTCCTTAGATCAGAG 59.372 54.545 0.00 0.00 0.00 3.35
5400 6566 2.023984 TGAGCCCAGTCCTTAGATCAGA 60.024 50.000 0.00 0.00 0.00 3.27
5401 6567 2.392662 TGAGCCCAGTCCTTAGATCAG 58.607 52.381 0.00 0.00 0.00 2.90
5402 6568 2.550277 TGAGCCCAGTCCTTAGATCA 57.450 50.000 0.00 0.00 0.00 2.92
5403 6569 3.914426 TTTGAGCCCAGTCCTTAGATC 57.086 47.619 0.00 0.00 0.00 2.75
5404 6570 4.043596 AGATTTGAGCCCAGTCCTTAGAT 58.956 43.478 0.00 0.00 0.00 1.98
5405 6571 3.454858 AGATTTGAGCCCAGTCCTTAGA 58.545 45.455 0.00 0.00 0.00 2.10
5406 6572 3.922171 AGATTTGAGCCCAGTCCTTAG 57.078 47.619 0.00 0.00 0.00 2.18
5407 6573 3.711704 CCTAGATTTGAGCCCAGTCCTTA 59.288 47.826 0.00 0.00 0.00 2.69
5408 6574 2.507471 CCTAGATTTGAGCCCAGTCCTT 59.493 50.000 0.00 0.00 0.00 3.36
5409 6575 2.122768 CCTAGATTTGAGCCCAGTCCT 58.877 52.381 0.00 0.00 0.00 3.85
5410 6576 1.840635 ACCTAGATTTGAGCCCAGTCC 59.159 52.381 0.00 0.00 0.00 3.85
5411 6577 2.158885 GGACCTAGATTTGAGCCCAGTC 60.159 54.545 0.00 0.00 0.00 3.51
5412 6578 1.840635 GGACCTAGATTTGAGCCCAGT 59.159 52.381 0.00 0.00 0.00 4.00
5413 6579 1.839994 TGGACCTAGATTTGAGCCCAG 59.160 52.381 0.00 0.00 0.00 4.45
5414 6580 1.839994 CTGGACCTAGATTTGAGCCCA 59.160 52.381 0.00 0.00 0.00 5.36
5415 6581 2.119495 TCTGGACCTAGATTTGAGCCC 58.881 52.381 0.00 0.00 0.00 5.19
5416 6582 3.186702 GTCTGGACCTAGATTTGAGCC 57.813 52.381 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.