Multiple sequence alignment - TraesCS3A01G091300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G091300 chr3A 100.000 1881 0 0 1 1881 57850360 57852240 0.000000e+00 3474
1 TraesCS3A01G091300 chr3A 94.138 870 47 2 746 1612 736120221 736119353 0.000000e+00 1321
2 TraesCS3A01G091300 chr3A 100.000 483 0 0 2100 2582 57852459 57852941 0.000000e+00 893
3 TraesCS3A01G091300 chr5D 95.392 868 36 3 746 1610 64313105 64312239 0.000000e+00 1378
4 TraesCS3A01G091300 chr5D 94.069 725 40 3 1 724 528153783 528153061 0.000000e+00 1098
5 TraesCS3A01G091300 chr5D 92.649 721 49 3 1 720 497092439 497091722 0.000000e+00 1035
6 TraesCS3A01G091300 chr5D 95.033 302 11 2 1311 1609 384886857 384887157 3.010000e-129 472
7 TraesCS3A01G091300 chr6D 94.708 737 36 2 746 1479 77598686 77599422 0.000000e+00 1142
8 TraesCS3A01G091300 chr6D 97.122 139 4 0 1472 1610 77617382 77617520 4.300000e-58 235
9 TraesCS3A01G091300 chr2A 93.629 722 41 4 1 720 36371004 36371722 0.000000e+00 1074
10 TraesCS3A01G091300 chr2A 93.454 718 46 1 3 720 728433788 728433072 0.000000e+00 1064
11 TraesCS3A01G091300 chr4D 93.490 722 41 6 1 720 458345714 458344997 0.000000e+00 1068
12 TraesCS3A01G091300 chr5A 93.343 721 45 3 1 720 299650253 299650971 0.000000e+00 1062
13 TraesCS3A01G091300 chr7A 93.343 721 41 5 1 720 621592662 621593376 0.000000e+00 1059
14 TraesCS3A01G091300 chr3D 92.649 721 50 2 1 720 472238551 472239269 0.000000e+00 1035
15 TraesCS3A01G091300 chr3D 81.423 253 22 7 1609 1836 46202767 46203019 1.580000e-42 183
16 TraesCS3A01G091300 chr3D 82.843 204 18 6 1694 1881 46244000 46244202 1.590000e-37 167
17 TraesCS3A01G091300 chr2D 92.680 724 44 8 1 720 458292040 458292758 0.000000e+00 1035
18 TraesCS3A01G091300 chr3B 83.526 346 34 18 2198 2526 72312784 72313123 4.180000e-78 302
19 TraesCS3A01G091300 chr3B 91.099 191 14 3 1692 1881 72197537 72197725 3.300000e-64 255
20 TraesCS3A01G091300 chr3B 82.879 257 36 6 2100 2350 72227477 72227731 9.300000e-55 224
21 TraesCS3A01G091300 chr3B 85.185 189 19 5 1701 1881 72227242 72227429 4.390000e-43 185
22 TraesCS3A01G091300 chr3B 79.577 284 26 11 1609 1860 71972700 71972983 9.500000e-40 174
23 TraesCS3A01G091300 chr3B 91.489 94 8 0 1787 1880 72312562 72312655 2.090000e-26 130
24 TraesCS3A01G091300 chr3B 90.698 86 8 0 1609 1694 72312397 72312482 5.840000e-22 115
25 TraesCS3A01G091300 chr3B 100.000 60 0 0 1692 1751 72312505 72312564 7.550000e-21 111


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G091300 chr3A 57850360 57852941 2581 False 2183.5 3474 100.000 1 2582 2 chr3A.!!$F1 2581
1 TraesCS3A01G091300 chr3A 736119353 736120221 868 True 1321.0 1321 94.138 746 1612 1 chr3A.!!$R1 866
2 TraesCS3A01G091300 chr5D 64312239 64313105 866 True 1378.0 1378 95.392 746 1610 1 chr5D.!!$R1 864
3 TraesCS3A01G091300 chr5D 528153061 528153783 722 True 1098.0 1098 94.069 1 724 1 chr5D.!!$R3 723
4 TraesCS3A01G091300 chr5D 497091722 497092439 717 True 1035.0 1035 92.649 1 720 1 chr5D.!!$R2 719
5 TraesCS3A01G091300 chr6D 77598686 77599422 736 False 1142.0 1142 94.708 746 1479 1 chr6D.!!$F1 733
6 TraesCS3A01G091300 chr2A 36371004 36371722 718 False 1074.0 1074 93.629 1 720 1 chr2A.!!$F1 719
7 TraesCS3A01G091300 chr2A 728433072 728433788 716 True 1064.0 1064 93.454 3 720 1 chr2A.!!$R1 717
8 TraesCS3A01G091300 chr4D 458344997 458345714 717 True 1068.0 1068 93.490 1 720 1 chr4D.!!$R1 719
9 TraesCS3A01G091300 chr5A 299650253 299650971 718 False 1062.0 1062 93.343 1 720 1 chr5A.!!$F1 719
10 TraesCS3A01G091300 chr7A 621592662 621593376 714 False 1059.0 1059 93.343 1 720 1 chr7A.!!$F1 719
11 TraesCS3A01G091300 chr3D 472238551 472239269 718 False 1035.0 1035 92.649 1 720 1 chr3D.!!$F3 719
12 TraesCS3A01G091300 chr2D 458292040 458292758 718 False 1035.0 1035 92.680 1 720 1 chr2D.!!$F1 719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
811 818 0.037697 GCCGGCGGAGGAAAAATTTT 60.038 50.0 33.44 0.0 0.0 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2112 2122 0.035915 GAGCCCTTCCTCTGGTTGAC 60.036 60.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 5.141182 TCCACCAAATAAACCAACTAGCAA 58.859 37.500 0.00 0.00 0.00 3.91
61 62 5.031066 ACCAACTAGCAACAACTACAAGA 57.969 39.130 0.00 0.00 0.00 3.02
63 64 5.883673 ACCAACTAGCAACAACTACAAGAAA 59.116 36.000 0.00 0.00 0.00 2.52
84 85 9.726438 AAGAAATAATCAACACTACTAGCAACT 57.274 29.630 0.00 0.00 0.00 3.16
311 313 1.007038 CGGAGTTTCGTCCCGTGAA 60.007 57.895 0.00 0.00 38.55 3.18
323 325 3.270877 GTCCCGTGAACTTGCTTATGAT 58.729 45.455 0.00 0.00 0.00 2.45
518 525 1.860078 GTGCTCCCGTGAAGTTTCG 59.140 57.895 0.00 0.00 0.00 3.46
533 540 4.426736 AGTTTCGGGACTTTTGGAGTTA 57.573 40.909 0.00 0.00 39.19 2.24
542 549 5.393461 GGGACTTTTGGAGTTATGCAGAATG 60.393 44.000 0.00 0.00 39.19 2.67
561 568 8.371699 GCAGAATGGGTCTCTAATATTTACTCT 58.628 37.037 0.00 0.00 32.70 3.24
579 586 4.226384 ACTCTTTTTCCAGCCCAGAATTT 58.774 39.130 0.00 0.00 0.00 1.82
688 695 6.127647 ACAGCCCATAATGCAATAAATATCGG 60.128 38.462 0.00 0.00 0.00 4.18
721 728 6.488817 CATGATGCAAAATGAACGTATCAGA 58.511 36.000 6.18 0.00 42.53 3.27
724 731 4.574892 TGCAAAATGAACGTATCAGAGGA 58.425 39.130 0.00 0.00 42.53 3.71
725 732 5.185454 TGCAAAATGAACGTATCAGAGGAT 58.815 37.500 0.00 0.00 42.53 3.24
726 733 5.065090 TGCAAAATGAACGTATCAGAGGATG 59.935 40.000 0.00 0.00 42.53 3.51
727 734 5.294306 GCAAAATGAACGTATCAGAGGATGA 59.706 40.000 0.00 0.00 42.53 2.92
728 735 6.510799 GCAAAATGAACGTATCAGAGGATGAG 60.511 42.308 0.00 0.00 42.53 2.90
729 736 6.471233 AAATGAACGTATCAGAGGATGAGA 57.529 37.500 0.00 0.00 42.53 3.27
730 737 4.902443 TGAACGTATCAGAGGATGAGAC 57.098 45.455 0.00 0.00 44.96 3.36
739 746 5.379706 TCAGAGGATGAGACAGAGTATCA 57.620 43.478 0.00 0.00 38.15 2.15
740 747 5.951204 TCAGAGGATGAGACAGAGTATCAT 58.049 41.667 6.95 6.95 45.40 2.45
741 748 5.769162 TCAGAGGATGAGACAGAGTATCATG 59.231 44.000 11.50 0.01 43.25 3.07
742 749 5.535783 CAGAGGATGAGACAGAGTATCATGT 59.464 44.000 11.50 0.00 43.25 3.21
743 750 6.714356 CAGAGGATGAGACAGAGTATCATGTA 59.286 42.308 11.50 0.00 43.25 2.29
744 751 6.942005 AGAGGATGAGACAGAGTATCATGTAG 59.058 42.308 11.50 0.00 43.25 2.74
776 783 1.019278 GCGCTTCGGTCTGAAATCCA 61.019 55.000 0.00 0.00 35.79 3.41
811 818 0.037697 GCCGGCGGAGGAAAAATTTT 60.038 50.000 33.44 0.00 0.00 1.82
858 865 0.239347 GCCTGTTGAGTGCATGTGAC 59.761 55.000 0.00 0.00 0.00 3.67
900 907 9.821240 AGAATCCTTCTAATAATCTAGAGAGCA 57.179 33.333 0.00 0.00 38.49 4.26
936 943 0.767375 ACAGTGTGCATGAGGAAGGT 59.233 50.000 0.00 0.00 0.00 3.50
982 989 6.764085 TGTGGAATTCTTGAAGAAGTACGAAA 59.236 34.615 13.56 0.00 36.00 3.46
990 997 8.744008 TCTTGAAGAAGTACGAAATAGAAGTG 57.256 34.615 0.00 0.00 0.00 3.16
1085 1092 1.108727 CAGACTGCCAAACCCAAGCA 61.109 55.000 0.00 0.00 34.79 3.91
1139 1146 1.466167 GAACACAGACGCAGCATTCAT 59.534 47.619 0.00 0.00 0.00 2.57
1215 1222 2.815647 GCTCTTTCGGGCTGTCGG 60.816 66.667 0.00 0.00 0.00 4.79
1225 1232 4.154347 GCTGTCGGAGGCTGGAGG 62.154 72.222 0.00 0.00 0.00 4.30
1317 1324 3.196469 TCAGAGGCAAAGTCATAGTGGAG 59.804 47.826 0.00 0.00 0.00 3.86
1337 1344 1.797635 GACTGACTGTGCTTCTCTTGC 59.202 52.381 0.00 0.00 0.00 4.01
1378 1388 0.244721 GAACAAATCAGCCCTGCACC 59.755 55.000 0.00 0.00 0.00 5.01
1397 1407 5.706833 TGCACCATACCATTGCTGATATTAG 59.293 40.000 0.00 0.00 37.16 1.73
1403 1413 7.361542 CCATACCATTGCTGATATTAGACTTGC 60.362 40.741 0.00 0.00 0.00 4.01
1449 1459 3.540314 ATCTCAGTGATCAGCAGAACC 57.460 47.619 0.00 0.00 0.00 3.62
1527 1537 2.762535 TGCTTGCTACTGTTCCTACC 57.237 50.000 0.00 0.00 0.00 3.18
1583 1593 8.691661 AATAGTTGTTTGATCAGGTTGTAAGT 57.308 30.769 0.00 0.00 0.00 2.24
1630 1640 4.724279 AAACCTTTCATCCACTACTGGT 57.276 40.909 0.00 0.00 38.90 4.00
1631 1641 4.724279 AACCTTTCATCCACTACTGGTT 57.276 40.909 0.00 0.00 38.90 3.67
1632 1642 4.724279 ACCTTTCATCCACTACTGGTTT 57.276 40.909 0.00 0.00 38.90 3.27
1633 1643 4.398319 ACCTTTCATCCACTACTGGTTTG 58.602 43.478 0.00 0.00 38.90 2.93
1634 1644 4.141251 ACCTTTCATCCACTACTGGTTTGT 60.141 41.667 0.00 0.00 38.90 2.83
1635 1645 4.216257 CCTTTCATCCACTACTGGTTTGTG 59.784 45.833 0.00 0.00 38.90 3.33
1636 1646 4.698201 TTCATCCACTACTGGTTTGTGA 57.302 40.909 0.00 0.00 38.90 3.58
1637 1647 4.271696 TCATCCACTACTGGTTTGTGAG 57.728 45.455 0.00 0.00 38.90 3.51
1638 1648 3.007940 TCATCCACTACTGGTTTGTGAGG 59.992 47.826 0.00 0.00 38.90 3.86
1639 1649 1.697432 TCCACTACTGGTTTGTGAGGG 59.303 52.381 0.00 0.00 38.90 4.30
1640 1650 1.523758 CACTACTGGTTTGTGAGGGC 58.476 55.000 0.00 0.00 33.95 5.19
1641 1651 1.136828 ACTACTGGTTTGTGAGGGCA 58.863 50.000 0.00 0.00 0.00 5.36
1642 1652 1.705186 ACTACTGGTTTGTGAGGGCAT 59.295 47.619 0.00 0.00 0.00 4.40
1643 1653 2.290323 ACTACTGGTTTGTGAGGGCATC 60.290 50.000 0.00 0.00 0.00 3.91
1644 1654 0.773644 ACTGGTTTGTGAGGGCATCT 59.226 50.000 0.00 0.00 0.00 2.90
1645 1655 1.171308 CTGGTTTGTGAGGGCATCTG 58.829 55.000 0.00 0.00 0.00 2.90
1646 1656 0.895100 TGGTTTGTGAGGGCATCTGC 60.895 55.000 0.00 0.00 41.14 4.26
1647 1657 0.895100 GGTTTGTGAGGGCATCTGCA 60.895 55.000 0.00 0.00 44.36 4.41
1648 1658 0.961019 GTTTGTGAGGGCATCTGCAA 59.039 50.000 0.00 3.28 44.36 4.08
1649 1659 0.961019 TTTGTGAGGGCATCTGCAAC 59.039 50.000 0.00 0.00 44.36 4.17
1650 1660 1.236616 TTGTGAGGGCATCTGCAACG 61.237 55.000 0.00 0.00 44.36 4.10
1651 1661 2.046023 TGAGGGCATCTGCAACGG 60.046 61.111 0.00 0.00 44.36 4.44
1652 1662 2.268920 GAGGGCATCTGCAACGGA 59.731 61.111 4.33 0.00 44.36 4.69
1653 1663 1.377202 GAGGGCATCTGCAACGGAA 60.377 57.895 4.33 0.00 44.36 4.30
1654 1664 1.648467 GAGGGCATCTGCAACGGAAC 61.648 60.000 4.33 0.00 44.36 3.62
1655 1665 1.675641 GGGCATCTGCAACGGAACT 60.676 57.895 4.33 0.00 44.36 3.01
1656 1666 1.648467 GGGCATCTGCAACGGAACTC 61.648 60.000 4.33 0.00 44.36 3.01
1657 1667 0.674895 GGCATCTGCAACGGAACTCT 60.675 55.000 4.33 0.00 44.36 3.24
1658 1668 1.160137 GCATCTGCAACGGAACTCTT 58.840 50.000 0.00 0.00 41.59 2.85
1659 1669 1.129437 GCATCTGCAACGGAACTCTTC 59.871 52.381 0.00 0.00 41.59 2.87
1660 1670 2.693069 CATCTGCAACGGAACTCTTCT 58.307 47.619 0.00 0.00 0.00 2.85
1661 1671 2.910688 TCTGCAACGGAACTCTTCTT 57.089 45.000 0.00 0.00 0.00 2.52
1662 1672 4.245660 CATCTGCAACGGAACTCTTCTTA 58.754 43.478 0.00 0.00 0.00 2.10
1663 1673 4.537135 TCTGCAACGGAACTCTTCTTAT 57.463 40.909 0.00 0.00 0.00 1.73
1664 1674 4.894784 TCTGCAACGGAACTCTTCTTATT 58.105 39.130 0.00 0.00 0.00 1.40
1665 1675 5.305585 TCTGCAACGGAACTCTTCTTATTT 58.694 37.500 0.00 0.00 0.00 1.40
1666 1676 5.179368 TCTGCAACGGAACTCTTCTTATTTG 59.821 40.000 0.00 0.00 0.00 2.32
1667 1677 5.060506 TGCAACGGAACTCTTCTTATTTGA 58.939 37.500 0.00 0.00 0.00 2.69
1668 1678 5.179368 TGCAACGGAACTCTTCTTATTTGAG 59.821 40.000 0.00 0.00 0.00 3.02
1669 1679 5.622378 CAACGGAACTCTTCTTATTTGAGC 58.378 41.667 0.00 0.00 0.00 4.26
1670 1680 5.153950 ACGGAACTCTTCTTATTTGAGCT 57.846 39.130 0.00 0.00 0.00 4.09
1671 1681 5.552178 ACGGAACTCTTCTTATTTGAGCTT 58.448 37.500 0.00 0.00 0.00 3.74
1672 1682 5.409826 ACGGAACTCTTCTTATTTGAGCTTG 59.590 40.000 0.00 0.00 0.00 4.01
1673 1683 5.163814 CGGAACTCTTCTTATTTGAGCTTGG 60.164 44.000 0.00 0.00 0.00 3.61
1674 1684 5.940470 GGAACTCTTCTTATTTGAGCTTGGA 59.060 40.000 0.00 0.00 0.00 3.53
1675 1685 6.601217 GGAACTCTTCTTATTTGAGCTTGGAT 59.399 38.462 0.00 0.00 0.00 3.41
1676 1686 6.998968 ACTCTTCTTATTTGAGCTTGGATG 57.001 37.500 0.00 0.00 0.00 3.51
1677 1687 5.884792 ACTCTTCTTATTTGAGCTTGGATGG 59.115 40.000 0.00 0.00 0.00 3.51
1678 1688 6.065976 TCTTCTTATTTGAGCTTGGATGGA 57.934 37.500 0.00 0.00 0.00 3.41
1679 1689 6.484288 TCTTCTTATTTGAGCTTGGATGGAA 58.516 36.000 0.00 0.00 0.00 3.53
1680 1690 6.600822 TCTTCTTATTTGAGCTTGGATGGAAG 59.399 38.462 0.00 0.00 0.00 3.46
1681 1691 6.065976 TCTTATTTGAGCTTGGATGGAAGA 57.934 37.500 0.00 0.00 0.00 2.87
1682 1692 6.118170 TCTTATTTGAGCTTGGATGGAAGAG 58.882 40.000 0.00 0.00 0.00 2.85
1683 1693 2.795231 TTGAGCTTGGATGGAAGAGG 57.205 50.000 0.00 0.00 0.00 3.69
1684 1694 1.661463 TGAGCTTGGATGGAAGAGGT 58.339 50.000 0.00 0.00 0.00 3.85
1685 1695 1.988107 TGAGCTTGGATGGAAGAGGTT 59.012 47.619 0.00 0.00 0.00 3.50
1686 1696 2.026822 TGAGCTTGGATGGAAGAGGTTC 60.027 50.000 0.00 0.00 0.00 3.62
1687 1697 1.065854 AGCTTGGATGGAAGAGGTTCG 60.066 52.381 0.00 0.00 32.92 3.95
1688 1698 1.066143 GCTTGGATGGAAGAGGTTCGA 60.066 52.381 0.00 0.00 32.92 3.71
1689 1699 2.615493 GCTTGGATGGAAGAGGTTCGAA 60.615 50.000 0.00 0.00 32.92 3.71
1690 1700 3.674997 CTTGGATGGAAGAGGTTCGAAA 58.325 45.455 0.00 0.00 32.92 3.46
1691 1701 4.265073 CTTGGATGGAAGAGGTTCGAAAT 58.735 43.478 0.00 0.00 32.92 2.17
1692 1702 5.428253 CTTGGATGGAAGAGGTTCGAAATA 58.572 41.667 0.00 0.00 32.92 1.40
1693 1703 5.429681 TGGATGGAAGAGGTTCGAAATAA 57.570 39.130 0.00 0.00 32.92 1.40
1694 1704 5.183228 TGGATGGAAGAGGTTCGAAATAAC 58.817 41.667 0.00 0.00 32.92 1.89
1702 1712 3.587403 GGTTCGAAATAACCAGCGATC 57.413 47.619 0.00 0.00 46.85 3.69
1703 1713 2.034001 GGTTCGAAATAACCAGCGATCG 60.034 50.000 11.69 11.69 46.85 3.69
1704 1714 1.847818 TCGAAATAACCAGCGATCGG 58.152 50.000 18.30 2.45 0.00 4.18
1705 1715 1.406180 TCGAAATAACCAGCGATCGGA 59.594 47.619 18.30 0.00 0.00 4.55
1706 1716 1.521423 CGAAATAACCAGCGATCGGAC 59.479 52.381 18.30 0.22 0.00 4.79
1707 1717 2.798499 CGAAATAACCAGCGATCGGACT 60.798 50.000 18.30 3.01 0.00 3.85
1708 1718 3.549423 CGAAATAACCAGCGATCGGACTA 60.549 47.826 18.30 0.00 0.00 2.59
1709 1719 3.644884 AATAACCAGCGATCGGACTAG 57.355 47.619 18.30 1.85 0.00 2.57
1710 1720 0.666913 TAACCAGCGATCGGACTAGC 59.333 55.000 18.30 0.00 0.00 3.42
1711 1721 1.320344 AACCAGCGATCGGACTAGCA 61.320 55.000 18.30 0.00 0.00 3.49
1712 1722 1.320344 ACCAGCGATCGGACTAGCAA 61.320 55.000 18.30 0.00 0.00 3.91
1713 1723 0.872021 CCAGCGATCGGACTAGCAAC 60.872 60.000 18.30 0.00 0.00 4.17
1714 1724 0.101399 CAGCGATCGGACTAGCAACT 59.899 55.000 18.30 0.00 0.00 3.16
1715 1725 0.382515 AGCGATCGGACTAGCAACTC 59.617 55.000 18.30 0.00 0.00 3.01
1716 1726 0.100682 GCGATCGGACTAGCAACTCA 59.899 55.000 18.30 0.00 0.00 3.41
1717 1727 1.828832 CGATCGGACTAGCAACTCAC 58.171 55.000 7.38 0.00 0.00 3.51
1718 1728 1.534175 CGATCGGACTAGCAACTCACC 60.534 57.143 7.38 0.00 0.00 4.02
1719 1729 1.751924 GATCGGACTAGCAACTCACCT 59.248 52.381 0.00 0.00 0.00 4.00
1720 1730 1.629043 TCGGACTAGCAACTCACCTT 58.371 50.000 0.00 0.00 0.00 3.50
1721 1731 1.272490 TCGGACTAGCAACTCACCTTG 59.728 52.381 0.00 0.00 0.00 3.61
1722 1732 1.443802 GGACTAGCAACTCACCTTGC 58.556 55.000 0.00 0.00 45.93 4.01
1727 1737 2.114638 GCAACTCACCTTGCAACCA 58.885 52.632 0.00 0.00 45.07 3.67
1728 1738 0.675633 GCAACTCACCTTGCAACCAT 59.324 50.000 0.00 0.00 45.07 3.55
1729 1739 1.069049 GCAACTCACCTTGCAACCATT 59.931 47.619 0.00 0.00 45.07 3.16
1730 1740 2.746269 CAACTCACCTTGCAACCATTG 58.254 47.619 0.00 0.00 0.00 2.82
1741 1751 2.754946 CAACCATTGCCAAGCTTGAT 57.245 45.000 28.05 10.64 0.00 2.57
1742 1752 2.613691 CAACCATTGCCAAGCTTGATC 58.386 47.619 28.05 18.11 0.00 2.92
1743 1753 1.927487 ACCATTGCCAAGCTTGATCA 58.073 45.000 28.05 20.38 0.00 2.92
1744 1754 2.250031 ACCATTGCCAAGCTTGATCAA 58.750 42.857 28.05 26.46 0.00 2.57
1745 1755 2.232941 ACCATTGCCAAGCTTGATCAAG 59.767 45.455 27.82 27.82 41.24 3.02
1746 1756 2.418197 CCATTGCCAAGCTTGATCAAGG 60.418 50.000 31.41 26.33 38.80 3.61
1752 1762 3.540211 AGCTTGATCAAGGTGGACG 57.460 52.632 33.28 11.23 46.17 4.79
1753 1763 0.674895 AGCTTGATCAAGGTGGACGC 60.675 55.000 33.28 19.65 46.17 5.19
1754 1764 0.955428 GCTTGATCAAGGTGGACGCA 60.955 55.000 31.41 0.00 38.80 5.24
1755 1765 1.742761 CTTGATCAAGGTGGACGCAT 58.257 50.000 25.14 0.00 34.87 4.73
1756 1766 1.667724 CTTGATCAAGGTGGACGCATC 59.332 52.381 25.14 0.00 34.87 3.91
1757 1767 0.107703 TGATCAAGGTGGACGCATCC 60.108 55.000 0.00 0.00 46.48 3.51
1765 1775 2.268920 GGACGCATCCAAGAGGCA 59.731 61.111 0.00 0.00 45.47 4.75
1766 1776 1.377202 GGACGCATCCAAGAGGCAA 60.377 57.895 0.00 0.00 45.47 4.52
1767 1777 0.960364 GGACGCATCCAAGAGGCAAA 60.960 55.000 0.00 0.00 45.47 3.68
1768 1778 1.098050 GACGCATCCAAGAGGCAAAT 58.902 50.000 1.97 0.00 39.45 2.32
1769 1779 2.288666 GACGCATCCAAGAGGCAAATA 58.711 47.619 1.97 0.00 39.45 1.40
1770 1780 2.880890 GACGCATCCAAGAGGCAAATAT 59.119 45.455 1.97 0.00 39.45 1.28
1771 1781 2.620115 ACGCATCCAAGAGGCAAATATG 59.380 45.455 1.97 0.00 39.45 1.78
1772 1782 2.880268 CGCATCCAAGAGGCAAATATGA 59.120 45.455 1.97 0.00 39.45 2.15
1773 1783 3.504906 CGCATCCAAGAGGCAAATATGAT 59.495 43.478 1.97 0.00 39.45 2.45
1774 1784 4.379186 CGCATCCAAGAGGCAAATATGATC 60.379 45.833 1.97 0.00 39.45 2.92
1775 1785 4.082354 GCATCCAAGAGGCAAATATGATCC 60.082 45.833 0.00 0.00 39.28 3.36
1776 1786 5.322754 CATCCAAGAGGCAAATATGATCCT 58.677 41.667 0.00 0.00 33.74 3.24
1777 1787 5.393068 TCCAAGAGGCAAATATGATCCTT 57.607 39.130 0.00 0.00 33.74 3.36
1778 1788 6.514012 TCCAAGAGGCAAATATGATCCTTA 57.486 37.500 0.00 0.00 33.74 2.69
1779 1789 7.095183 TCCAAGAGGCAAATATGATCCTTAT 57.905 36.000 0.00 0.00 33.74 1.73
1780 1790 7.170965 TCCAAGAGGCAAATATGATCCTTATC 58.829 38.462 0.00 0.00 33.74 1.75
1781 1791 6.944290 CCAAGAGGCAAATATGATCCTTATCA 59.056 38.462 0.00 0.00 46.01 2.15
1782 1792 7.094463 CCAAGAGGCAAATATGATCCTTATCAC 60.094 40.741 0.00 0.00 44.79 3.06
1783 1793 7.083062 AGAGGCAAATATGATCCTTATCACA 57.917 36.000 0.00 0.00 44.79 3.58
1784 1794 7.696981 AGAGGCAAATATGATCCTTATCACAT 58.303 34.615 0.00 0.00 44.79 3.21
1785 1795 7.828223 AGAGGCAAATATGATCCTTATCACATC 59.172 37.037 0.00 0.00 44.79 3.06
1786 1796 6.596888 AGGCAAATATGATCCTTATCACATCG 59.403 38.462 0.00 0.00 44.79 3.84
1787 1797 6.183360 GGCAAATATGATCCTTATCACATCGG 60.183 42.308 0.00 0.00 44.79 4.18
1788 1798 6.595326 GCAAATATGATCCTTATCACATCGGA 59.405 38.462 0.00 0.00 44.79 4.55
1789 1799 7.281774 GCAAATATGATCCTTATCACATCGGAT 59.718 37.037 0.00 0.00 44.79 4.18
1792 1802 4.442375 GATCCTTATCACATCGGATCGT 57.558 45.455 0.00 0.00 41.59 3.73
1793 1803 3.917329 TCCTTATCACATCGGATCGTC 57.083 47.619 0.00 0.00 0.00 4.20
1794 1804 2.225727 TCCTTATCACATCGGATCGTCG 59.774 50.000 0.00 0.00 0.00 5.12
1795 1805 2.031069 CCTTATCACATCGGATCGTCGT 60.031 50.000 0.00 0.00 0.00 4.34
1796 1806 2.681152 TATCACATCGGATCGTCGTG 57.319 50.000 0.00 0.98 33.85 4.35
1797 1807 0.595053 ATCACATCGGATCGTCGTGC 60.595 55.000 0.00 0.00 33.11 5.34
1798 1808 2.104331 ACATCGGATCGTCGTGCC 59.896 61.111 0.00 0.00 0.00 5.01
1799 1809 2.658593 CATCGGATCGTCGTGCCC 60.659 66.667 0.00 0.00 0.00 5.36
1800 1810 3.144871 ATCGGATCGTCGTGCCCA 61.145 61.111 0.00 0.00 0.00 5.36
1801 1811 3.426117 ATCGGATCGTCGTGCCCAC 62.426 63.158 0.00 0.00 0.00 4.61
1802 1812 4.129737 CGGATCGTCGTGCCCACT 62.130 66.667 0.00 0.00 0.00 4.00
1803 1813 2.202756 GGATCGTCGTGCCCACTC 60.203 66.667 0.00 0.00 0.00 3.51
1804 1814 2.579787 GATCGTCGTGCCCACTCG 60.580 66.667 0.00 2.43 0.00 4.18
1805 1815 3.047718 GATCGTCGTGCCCACTCGA 62.048 63.158 14.13 14.13 39.31 4.04
1806 1816 2.921538 GATCGTCGTGCCCACTCGAG 62.922 65.000 11.84 11.84 41.95 4.04
1807 1817 4.778415 CGTCGTGCCCACTCGAGG 62.778 72.222 18.41 5.65 41.95 4.63
1808 1818 3.681835 GTCGTGCCCACTCGAGGT 61.682 66.667 18.41 0.00 41.95 3.85
1809 1819 3.371063 TCGTGCCCACTCGAGGTC 61.371 66.667 18.41 3.06 36.92 3.85
1810 1820 3.374402 CGTGCCCACTCGAGGTCT 61.374 66.667 18.41 0.00 34.80 3.85
1811 1821 2.044555 CGTGCCCACTCGAGGTCTA 61.045 63.158 18.41 0.00 34.80 2.59
1812 1822 1.810532 GTGCCCACTCGAGGTCTAG 59.189 63.158 18.41 1.62 0.00 2.43
1813 1823 2.052690 TGCCCACTCGAGGTCTAGC 61.053 63.158 18.41 12.21 0.00 3.42
1814 1824 2.052690 GCCCACTCGAGGTCTAGCA 61.053 63.158 18.41 0.00 0.00 3.49
1815 1825 1.605058 GCCCACTCGAGGTCTAGCAA 61.605 60.000 18.41 0.00 0.00 3.91
1816 1826 0.173708 CCCACTCGAGGTCTAGCAAC 59.826 60.000 18.41 0.00 0.00 4.17
1817 1827 0.888619 CCACTCGAGGTCTAGCAACA 59.111 55.000 18.41 0.00 0.00 3.33
1818 1828 1.478510 CCACTCGAGGTCTAGCAACAT 59.521 52.381 18.41 0.00 0.00 2.71
1819 1829 2.480416 CCACTCGAGGTCTAGCAACATC 60.480 54.545 18.41 0.00 0.00 3.06
1820 1830 2.164422 CACTCGAGGTCTAGCAACATCA 59.836 50.000 18.41 0.00 30.55 3.07
1821 1831 2.425312 ACTCGAGGTCTAGCAACATCAG 59.575 50.000 18.41 0.00 30.55 2.90
1822 1832 2.425312 CTCGAGGTCTAGCAACATCAGT 59.575 50.000 3.91 0.00 30.55 3.41
1823 1833 2.826128 TCGAGGTCTAGCAACATCAGTT 59.174 45.455 0.00 0.00 38.88 3.16
1824 1834 3.119459 TCGAGGTCTAGCAACATCAGTTC 60.119 47.826 0.00 0.00 35.28 3.01
1825 1835 3.367395 CGAGGTCTAGCAACATCAGTTCA 60.367 47.826 0.00 0.00 35.28 3.18
1826 1836 3.929610 GAGGTCTAGCAACATCAGTTCAC 59.070 47.826 0.00 0.00 35.28 3.18
1827 1837 3.003480 GGTCTAGCAACATCAGTTCACC 58.997 50.000 0.00 0.00 35.28 4.02
1828 1838 3.003480 GTCTAGCAACATCAGTTCACCC 58.997 50.000 0.00 0.00 35.28 4.61
1829 1839 2.637382 TCTAGCAACATCAGTTCACCCA 59.363 45.455 0.00 0.00 35.28 4.51
1830 1840 2.363306 AGCAACATCAGTTCACCCAA 57.637 45.000 0.00 0.00 35.28 4.12
1831 1841 2.665165 AGCAACATCAGTTCACCCAAA 58.335 42.857 0.00 0.00 35.28 3.28
1832 1842 2.362077 AGCAACATCAGTTCACCCAAAC 59.638 45.455 0.00 0.00 35.28 2.93
1833 1843 2.545742 GCAACATCAGTTCACCCAAACC 60.546 50.000 0.00 0.00 35.28 3.27
1834 1844 2.692557 CAACATCAGTTCACCCAAACCA 59.307 45.455 0.00 0.00 35.28 3.67
1835 1845 3.243359 ACATCAGTTCACCCAAACCAT 57.757 42.857 0.00 0.00 0.00 3.55
1836 1846 2.892852 ACATCAGTTCACCCAAACCATG 59.107 45.455 0.00 0.00 0.00 3.66
1837 1847 1.327303 TCAGTTCACCCAAACCATGC 58.673 50.000 0.00 0.00 0.00 4.06
1838 1848 1.039068 CAGTTCACCCAAACCATGCA 58.961 50.000 0.00 0.00 0.00 3.96
1839 1849 1.411977 CAGTTCACCCAAACCATGCAA 59.588 47.619 0.00 0.00 0.00 4.08
1840 1850 1.412343 AGTTCACCCAAACCATGCAAC 59.588 47.619 0.00 0.00 0.00 4.17
1841 1851 1.137872 GTTCACCCAAACCATGCAACA 59.862 47.619 0.00 0.00 0.00 3.33
1842 1852 1.039068 TCACCCAAACCATGCAACAG 58.961 50.000 0.00 0.00 0.00 3.16
1843 1853 1.039068 CACCCAAACCATGCAACAGA 58.961 50.000 0.00 0.00 0.00 3.41
1844 1854 1.411977 CACCCAAACCATGCAACAGAA 59.588 47.619 0.00 0.00 0.00 3.02
1845 1855 1.688197 ACCCAAACCATGCAACAGAAG 59.312 47.619 0.00 0.00 0.00 2.85
1846 1856 1.962807 CCCAAACCATGCAACAGAAGA 59.037 47.619 0.00 0.00 0.00 2.87
1847 1857 2.564062 CCCAAACCATGCAACAGAAGAT 59.436 45.455 0.00 0.00 0.00 2.40
1848 1858 3.367703 CCCAAACCATGCAACAGAAGATC 60.368 47.826 0.00 0.00 0.00 2.75
1849 1859 3.256383 CCAAACCATGCAACAGAAGATCA 59.744 43.478 0.00 0.00 0.00 2.92
1850 1860 4.081862 CCAAACCATGCAACAGAAGATCAT 60.082 41.667 0.00 0.00 0.00 2.45
1851 1861 4.713824 AACCATGCAACAGAAGATCATG 57.286 40.909 0.00 0.00 35.55 3.07
1852 1862 2.426024 ACCATGCAACAGAAGATCATGC 59.574 45.455 0.00 0.00 34.72 4.06
1853 1863 2.223735 CCATGCAACAGAAGATCATGCC 60.224 50.000 0.00 0.00 36.20 4.40
1854 1864 1.466856 TGCAACAGAAGATCATGCCC 58.533 50.000 0.00 0.00 36.20 5.36
1855 1865 1.272037 TGCAACAGAAGATCATGCCCA 60.272 47.619 0.00 0.00 36.20 5.36
1856 1866 1.820519 GCAACAGAAGATCATGCCCAA 59.179 47.619 0.00 0.00 0.00 4.12
1857 1867 2.159282 GCAACAGAAGATCATGCCCAAG 60.159 50.000 0.00 0.00 0.00 3.61
1858 1868 2.426024 CAACAGAAGATCATGCCCAAGG 59.574 50.000 0.00 0.00 0.00 3.61
1859 1869 1.637553 ACAGAAGATCATGCCCAAGGT 59.362 47.619 0.00 0.00 0.00 3.50
1860 1870 2.022195 CAGAAGATCATGCCCAAGGTG 58.978 52.381 0.00 0.00 0.00 4.00
1861 1871 1.637553 AGAAGATCATGCCCAAGGTGT 59.362 47.619 0.00 0.00 0.00 4.16
1862 1872 2.042162 AGAAGATCATGCCCAAGGTGTT 59.958 45.455 0.00 0.00 0.00 3.32
1863 1873 2.610438 AGATCATGCCCAAGGTGTTT 57.390 45.000 0.00 0.00 0.00 2.83
1864 1874 3.737559 AGATCATGCCCAAGGTGTTTA 57.262 42.857 0.00 0.00 0.00 2.01
1865 1875 3.624777 AGATCATGCCCAAGGTGTTTAG 58.375 45.455 0.00 0.00 0.00 1.85
1866 1876 2.214376 TCATGCCCAAGGTGTTTAGG 57.786 50.000 0.00 0.00 0.00 2.69
1867 1877 0.532115 CATGCCCAAGGTGTTTAGGC 59.468 55.000 0.00 0.00 44.13 3.93
1868 1878 0.409484 ATGCCCAAGGTGTTTAGGCT 59.591 50.000 0.00 0.00 44.19 4.58
1869 1879 0.187361 TGCCCAAGGTGTTTAGGCTT 59.813 50.000 0.00 0.00 44.19 4.35
1870 1880 0.603065 GCCCAAGGTGTTTAGGCTTG 59.397 55.000 0.00 0.00 40.57 4.01
1871 1881 0.603065 CCCAAGGTGTTTAGGCTTGC 59.397 55.000 0.00 0.00 0.00 4.01
1872 1882 1.327303 CCAAGGTGTTTAGGCTTGCA 58.673 50.000 0.00 0.00 0.00 4.08
1873 1883 1.686052 CCAAGGTGTTTAGGCTTGCAA 59.314 47.619 0.00 0.00 0.00 4.08
1874 1884 2.102252 CCAAGGTGTTTAGGCTTGCAAA 59.898 45.455 0.00 0.00 0.00 3.68
1875 1885 3.244181 CCAAGGTGTTTAGGCTTGCAAAT 60.244 43.478 0.00 0.00 0.00 2.32
1876 1886 4.379652 CAAGGTGTTTAGGCTTGCAAATT 58.620 39.130 0.00 0.00 0.00 1.82
1877 1887 3.993920 AGGTGTTTAGGCTTGCAAATTG 58.006 40.909 0.00 0.00 0.00 2.32
1878 1888 3.387699 AGGTGTTTAGGCTTGCAAATTGT 59.612 39.130 0.00 0.00 0.00 2.71
1879 1889 3.494251 GGTGTTTAGGCTTGCAAATTGTG 59.506 43.478 0.00 0.00 0.00 3.33
1880 1890 3.494251 GTGTTTAGGCTTGCAAATTGTGG 59.506 43.478 0.00 0.00 0.00 4.17
2120 2130 3.930336 TGCTATGTCTCTTGTCAACCAG 58.070 45.455 0.00 0.00 0.00 4.00
2121 2131 3.578282 TGCTATGTCTCTTGTCAACCAGA 59.422 43.478 0.00 0.00 0.00 3.86
2122 2132 4.180057 GCTATGTCTCTTGTCAACCAGAG 58.820 47.826 5.16 5.16 0.00 3.35
2123 2133 3.692257 ATGTCTCTTGTCAACCAGAGG 57.308 47.619 10.39 0.00 0.00 3.69
2124 2134 2.677914 TGTCTCTTGTCAACCAGAGGA 58.322 47.619 10.39 0.00 0.00 3.71
2125 2135 3.038280 TGTCTCTTGTCAACCAGAGGAA 58.962 45.455 10.39 0.00 0.00 3.36
2126 2136 3.070159 TGTCTCTTGTCAACCAGAGGAAG 59.930 47.826 10.39 0.00 0.00 3.46
2127 2137 2.634940 TCTCTTGTCAACCAGAGGAAGG 59.365 50.000 10.39 0.00 0.00 3.46
2128 2138 1.699634 TCTTGTCAACCAGAGGAAGGG 59.300 52.381 0.00 0.00 0.00 3.95
2129 2139 0.110486 TTGTCAACCAGAGGAAGGGC 59.890 55.000 0.00 0.00 0.00 5.19
2130 2140 0.768221 TGTCAACCAGAGGAAGGGCT 60.768 55.000 0.00 0.00 0.00 5.19
2131 2141 0.035915 GTCAACCAGAGGAAGGGCTC 60.036 60.000 0.00 0.00 0.00 4.70
2132 2142 0.178891 TCAACCAGAGGAAGGGCTCT 60.179 55.000 0.00 0.00 0.00 4.09
2133 2143 0.251634 CAACCAGAGGAAGGGCTCTC 59.748 60.000 0.00 0.00 0.00 3.20
2134 2144 0.178891 AACCAGAGGAAGGGCTCTCA 60.179 55.000 0.00 0.00 32.76 3.27
2135 2145 0.907230 ACCAGAGGAAGGGCTCTCAC 60.907 60.000 0.00 0.00 32.76 3.51
2136 2146 1.621672 CCAGAGGAAGGGCTCTCACC 61.622 65.000 1.96 1.96 32.76 4.02
2145 2155 3.091318 GGCTCTCACCCATGACATG 57.909 57.895 8.56 8.56 0.00 3.21
2146 2156 0.254178 GGCTCTCACCCATGACATGT 59.746 55.000 14.26 0.00 0.00 3.21
2147 2157 1.340405 GGCTCTCACCCATGACATGTT 60.340 52.381 14.26 0.00 0.00 2.71
2148 2158 2.092968 GGCTCTCACCCATGACATGTTA 60.093 50.000 14.26 0.00 0.00 2.41
2149 2159 2.939103 GCTCTCACCCATGACATGTTAC 59.061 50.000 14.26 0.00 0.00 2.50
2150 2160 3.535561 CTCTCACCCATGACATGTTACC 58.464 50.000 14.26 0.00 0.00 2.85
2151 2161 2.909662 TCTCACCCATGACATGTTACCA 59.090 45.455 14.26 0.00 0.00 3.25
2152 2162 3.523157 TCTCACCCATGACATGTTACCAT 59.477 43.478 14.26 0.00 0.00 3.55
2153 2163 4.018506 TCTCACCCATGACATGTTACCATT 60.019 41.667 14.26 0.00 0.00 3.16
2154 2164 4.015764 TCACCCATGACATGTTACCATTG 58.984 43.478 14.26 0.00 0.00 2.82
2155 2165 3.130869 CACCCATGACATGTTACCATTGG 59.869 47.826 14.26 12.20 31.59 3.16
2156 2166 3.245586 ACCCATGACATGTTACCATTGGT 60.246 43.478 13.94 13.94 40.16 3.67
2157 2167 3.381272 CCCATGACATGTTACCATTGGTC 59.619 47.826 12.68 0.00 37.09 4.02
2158 2168 3.065233 CCATGACATGTTACCATTGGTCG 59.935 47.826 12.68 0.00 37.09 4.79
2159 2169 2.705730 TGACATGTTACCATTGGTCGG 58.294 47.619 12.68 1.35 37.09 4.79
2160 2170 2.014128 GACATGTTACCATTGGTCGGG 58.986 52.381 12.68 1.72 37.09 5.14
2161 2171 0.738389 CATGTTACCATTGGTCGGGC 59.262 55.000 12.68 2.02 37.09 6.13
2162 2172 0.623723 ATGTTACCATTGGTCGGGCT 59.376 50.000 12.68 0.00 37.09 5.19
2163 2173 1.277579 TGTTACCATTGGTCGGGCTA 58.722 50.000 12.68 0.00 37.09 3.93
2164 2174 1.208535 TGTTACCATTGGTCGGGCTAG 59.791 52.381 12.68 0.00 37.09 3.42
2165 2175 0.834612 TTACCATTGGTCGGGCTAGG 59.165 55.000 12.68 0.00 37.09 3.02
2166 2176 0.325860 TACCATTGGTCGGGCTAGGT 60.326 55.000 12.68 0.00 37.09 3.08
2167 2177 0.325860 ACCATTGGTCGGGCTAGGTA 60.326 55.000 1.37 0.00 0.00 3.08
2168 2178 0.393077 CCATTGGTCGGGCTAGGTAG 59.607 60.000 0.00 0.00 0.00 3.18
2179 2189 0.938008 GCTAGGTAGCGTTGATTGCC 59.062 55.000 0.00 0.00 39.82 4.52
2180 2190 1.742411 GCTAGGTAGCGTTGATTGCCA 60.742 52.381 0.00 0.00 39.82 4.92
2181 2191 2.205074 CTAGGTAGCGTTGATTGCCAG 58.795 52.381 0.00 0.00 0.00 4.85
2182 2192 0.324943 AGGTAGCGTTGATTGCCAGT 59.675 50.000 0.00 0.00 0.00 4.00
2183 2193 1.165270 GGTAGCGTTGATTGCCAGTT 58.835 50.000 0.00 0.00 0.00 3.16
2184 2194 2.027561 AGGTAGCGTTGATTGCCAGTTA 60.028 45.455 0.00 0.00 0.00 2.24
2185 2195 2.943033 GGTAGCGTTGATTGCCAGTTAT 59.057 45.455 0.00 0.00 0.00 1.89
2186 2196 3.377172 GGTAGCGTTGATTGCCAGTTATT 59.623 43.478 0.00 0.00 0.00 1.40
2187 2197 4.142469 GGTAGCGTTGATTGCCAGTTATTT 60.142 41.667 0.00 0.00 0.00 1.40
2188 2198 4.519540 AGCGTTGATTGCCAGTTATTTT 57.480 36.364 0.00 0.00 0.00 1.82
2189 2199 5.637006 AGCGTTGATTGCCAGTTATTTTA 57.363 34.783 0.00 0.00 0.00 1.52
2190 2200 5.640732 AGCGTTGATTGCCAGTTATTTTAG 58.359 37.500 0.00 0.00 0.00 1.85
2191 2201 5.183140 AGCGTTGATTGCCAGTTATTTTAGT 59.817 36.000 0.00 0.00 0.00 2.24
2192 2202 5.286082 GCGTTGATTGCCAGTTATTTTAGTG 59.714 40.000 0.00 0.00 0.00 2.74
2193 2203 6.607689 CGTTGATTGCCAGTTATTTTAGTGA 58.392 36.000 0.00 0.00 0.00 3.41
2194 2204 6.742718 CGTTGATTGCCAGTTATTTTAGTGAG 59.257 38.462 0.00 0.00 0.00 3.51
2195 2205 7.360861 CGTTGATTGCCAGTTATTTTAGTGAGA 60.361 37.037 0.00 0.00 0.00 3.27
2196 2206 7.615582 TGATTGCCAGTTATTTTAGTGAGAG 57.384 36.000 0.00 0.00 0.00 3.20
2197 2207 7.394016 TGATTGCCAGTTATTTTAGTGAGAGA 58.606 34.615 0.00 0.00 0.00 3.10
2198 2208 8.049117 TGATTGCCAGTTATTTTAGTGAGAGAT 58.951 33.333 0.00 0.00 0.00 2.75
2199 2209 7.849804 TTGCCAGTTATTTTAGTGAGAGATC 57.150 36.000 0.00 0.00 0.00 2.75
2200 2210 6.946340 TGCCAGTTATTTTAGTGAGAGATCA 58.054 36.000 0.00 0.00 0.00 2.92
2201 2211 7.394016 TGCCAGTTATTTTAGTGAGAGATCAA 58.606 34.615 0.00 0.00 0.00 2.57
2202 2212 7.882791 TGCCAGTTATTTTAGTGAGAGATCAAA 59.117 33.333 0.00 0.00 0.00 2.69
2203 2213 8.394121 GCCAGTTATTTTAGTGAGAGATCAAAG 58.606 37.037 0.00 0.00 0.00 2.77
2204 2214 9.442047 CCAGTTATTTTAGTGAGAGATCAAAGT 57.558 33.333 0.00 0.00 0.00 2.66
2210 2220 8.744008 TTTTAGTGAGAGATCAAAGTACTTCG 57.256 34.615 8.95 0.00 0.00 3.79
2211 2221 5.968528 AGTGAGAGATCAAAGTACTTCGT 57.031 39.130 8.95 0.00 0.00 3.85
2212 2222 6.334102 AGTGAGAGATCAAAGTACTTCGTT 57.666 37.500 8.95 0.00 0.00 3.85
2213 2223 7.450124 AGTGAGAGATCAAAGTACTTCGTTA 57.550 36.000 8.95 0.00 0.00 3.18
2214 2224 7.531716 AGTGAGAGATCAAAGTACTTCGTTAG 58.468 38.462 8.95 0.00 0.00 2.34
2215 2225 6.748198 GTGAGAGATCAAAGTACTTCGTTAGG 59.252 42.308 8.95 0.00 0.00 2.69
2216 2226 5.652518 AGAGATCAAAGTACTTCGTTAGGC 58.347 41.667 8.95 0.00 0.00 3.93
2217 2227 5.419471 AGAGATCAAAGTACTTCGTTAGGCT 59.581 40.000 8.95 0.00 0.00 4.58
2218 2228 6.038997 AGATCAAAGTACTTCGTTAGGCTT 57.961 37.500 8.95 0.00 0.00 4.35
2219 2229 6.100668 AGATCAAAGTACTTCGTTAGGCTTC 58.899 40.000 8.95 0.00 0.00 3.86
2220 2230 5.204409 TCAAAGTACTTCGTTAGGCTTCA 57.796 39.130 8.95 0.00 0.00 3.02
2221 2231 5.227908 TCAAAGTACTTCGTTAGGCTTCAG 58.772 41.667 8.95 0.00 0.00 3.02
2222 2232 3.870633 AGTACTTCGTTAGGCTTCAGG 57.129 47.619 0.00 0.00 0.00 3.86
2223 2233 3.428532 AGTACTTCGTTAGGCTTCAGGA 58.571 45.455 0.00 0.00 0.00 3.86
2224 2234 4.024670 AGTACTTCGTTAGGCTTCAGGAT 58.975 43.478 0.00 0.00 0.00 3.24
2225 2235 3.983044 ACTTCGTTAGGCTTCAGGATT 57.017 42.857 0.00 0.00 0.00 3.01
2226 2236 3.863041 ACTTCGTTAGGCTTCAGGATTC 58.137 45.455 0.00 0.00 0.00 2.52
2227 2237 2.579207 TCGTTAGGCTTCAGGATTCG 57.421 50.000 0.00 0.00 0.00 3.34
2228 2238 0.931005 CGTTAGGCTTCAGGATTCGC 59.069 55.000 0.00 0.00 0.00 4.70
2229 2239 1.300481 GTTAGGCTTCAGGATTCGCC 58.700 55.000 0.00 0.00 42.79 5.54
2230 2240 0.179084 TTAGGCTTCAGGATTCGCCG 60.179 55.000 0.00 0.00 46.85 6.46
2231 2241 2.028125 TAGGCTTCAGGATTCGCCGG 62.028 60.000 0.00 0.00 46.85 6.13
2232 2242 2.125106 GCTTCAGGATTCGCCGGT 60.125 61.111 1.90 0.00 43.43 5.28
2233 2243 1.745489 GCTTCAGGATTCGCCGGTT 60.745 57.895 1.90 0.00 43.43 4.44
2234 2244 1.305930 GCTTCAGGATTCGCCGGTTT 61.306 55.000 1.90 0.00 43.43 3.27
2235 2245 2.010043 GCTTCAGGATTCGCCGGTTTA 61.010 52.381 1.90 0.00 43.43 2.01
2236 2246 1.933853 CTTCAGGATTCGCCGGTTTAG 59.066 52.381 1.90 0.00 43.43 1.85
2237 2247 0.461339 TCAGGATTCGCCGGTTTAGC 60.461 55.000 1.90 0.00 43.43 3.09
2238 2248 0.742990 CAGGATTCGCCGGTTTAGCA 60.743 55.000 1.90 0.00 43.43 3.49
2239 2249 0.743345 AGGATTCGCCGGTTTAGCAC 60.743 55.000 1.90 0.00 43.43 4.40
2240 2250 1.712018 GGATTCGCCGGTTTAGCACC 61.712 60.000 1.90 0.00 43.16 5.01
2241 2251 0.743345 GATTCGCCGGTTTAGCACCT 60.743 55.000 1.90 0.00 44.69 4.00
2242 2252 0.322187 ATTCGCCGGTTTAGCACCTT 60.322 50.000 1.90 0.00 44.69 3.50
2243 2253 0.535553 TTCGCCGGTTTAGCACCTTT 60.536 50.000 1.90 0.00 44.69 3.11
2244 2254 0.535553 TCGCCGGTTTAGCACCTTTT 60.536 50.000 1.90 0.00 44.69 2.27
2245 2255 0.386731 CGCCGGTTTAGCACCTTTTG 60.387 55.000 1.90 0.00 44.69 2.44
2246 2256 0.038618 GCCGGTTTAGCACCTTTTGG 60.039 55.000 1.90 0.00 44.69 3.28
2262 2272 6.149129 CCTTTTGGTTTCTTACTTTCTGCT 57.851 37.500 0.00 0.00 34.07 4.24
2263 2273 6.573434 CCTTTTGGTTTCTTACTTTCTGCTT 58.427 36.000 0.00 0.00 34.07 3.91
2264 2274 7.041721 CCTTTTGGTTTCTTACTTTCTGCTTT 58.958 34.615 0.00 0.00 34.07 3.51
2265 2275 7.549134 CCTTTTGGTTTCTTACTTTCTGCTTTT 59.451 33.333 0.00 0.00 34.07 2.27
2266 2276 9.581099 CTTTTGGTTTCTTACTTTCTGCTTTTA 57.419 29.630 0.00 0.00 0.00 1.52
2348 2358 8.751302 GTGAAACTCTTGGTTGTTTAAGAAAA 57.249 30.769 0.00 0.00 38.29 2.29
2349 2359 9.198837 GTGAAACTCTTGGTTGTTTAAGAAAAA 57.801 29.630 0.00 0.00 38.29 1.94
2389 2399 9.829507 TTTGAAAAACAAATCTTCATGTACCAT 57.170 25.926 0.00 0.00 42.57 3.55
2416 2426 8.721019 AAAAATGATGAATGTGTGTTCAACTT 57.279 26.923 0.00 0.00 41.09 2.66
2417 2427 9.814899 AAAAATGATGAATGTGTGTTCAACTTA 57.185 25.926 0.00 0.00 41.09 2.24
2418 2428 9.985730 AAAATGATGAATGTGTGTTCAACTTAT 57.014 25.926 0.00 0.00 41.09 1.73
2475 2485 9.769093 AATCAACACGTATTTATAAAACTGCTC 57.231 29.630 1.21 0.00 0.00 4.26
2476 2486 7.449827 TCAACACGTATTTATAAAACTGCTCG 58.550 34.615 1.21 4.31 0.00 5.03
2477 2487 6.956299 ACACGTATTTATAAAACTGCTCGT 57.044 33.333 1.21 4.86 0.00 4.18
2478 2488 7.355332 ACACGTATTTATAAAACTGCTCGTT 57.645 32.000 1.21 0.00 37.47 3.85
2479 2489 7.231607 ACACGTATTTATAAAACTGCTCGTTG 58.768 34.615 1.21 5.56 35.61 4.10
2480 2490 7.095523 ACACGTATTTATAAAACTGCTCGTTGT 60.096 33.333 1.21 6.02 35.61 3.32
2481 2491 7.213706 CACGTATTTATAAAACTGCTCGTTGTG 59.786 37.037 1.21 1.17 35.61 3.33
2482 2492 7.095523 ACGTATTTATAAAACTGCTCGTTGTGT 60.096 33.333 1.21 0.00 35.61 3.72
2483 2493 8.374728 CGTATTTATAAAACTGCTCGTTGTGTA 58.625 33.333 1.21 0.00 35.61 2.90
2487 2497 9.601971 TTTATAAAACTGCTCGTTGTGTATTTC 57.398 29.630 0.00 0.00 35.61 2.17
2488 2498 5.493133 AAAACTGCTCGTTGTGTATTTCA 57.507 34.783 0.00 0.00 35.61 2.69
2489 2499 5.493133 AAACTGCTCGTTGTGTATTTCAA 57.507 34.783 0.00 0.00 35.61 2.69
2490 2500 5.493133 AACTGCTCGTTGTGTATTTCAAA 57.507 34.783 0.00 0.00 33.72 2.69
2491 2501 5.095691 ACTGCTCGTTGTGTATTTCAAAG 57.904 39.130 0.00 0.00 0.00 2.77
2492 2502 4.814234 ACTGCTCGTTGTGTATTTCAAAGA 59.186 37.500 0.00 0.00 33.78 2.52
2493 2503 5.470098 ACTGCTCGTTGTGTATTTCAAAGAT 59.530 36.000 0.00 0.00 34.21 2.40
2494 2504 6.649141 ACTGCTCGTTGTGTATTTCAAAGATA 59.351 34.615 0.00 0.00 34.21 1.98
2495 2505 7.334421 ACTGCTCGTTGTGTATTTCAAAGATAT 59.666 33.333 0.00 0.00 34.21 1.63
2496 2506 8.039603 TGCTCGTTGTGTATTTCAAAGATATT 57.960 30.769 0.00 0.00 34.21 1.28
2497 2507 8.175069 TGCTCGTTGTGTATTTCAAAGATATTC 58.825 33.333 0.00 0.00 34.21 1.75
2498 2508 8.175069 GCTCGTTGTGTATTTCAAAGATATTCA 58.825 33.333 0.00 0.00 34.21 2.57
2500 2510 9.820229 TCGTTGTGTATTTCAAAGATATTCAAC 57.180 29.630 0.00 0.00 31.00 3.18
2501 2511 9.605955 CGTTGTGTATTTCAAAGATATTCAACA 57.394 29.630 0.00 0.00 32.11 3.33
2521 2531 9.457110 TTCAACATGTATTTGTACAATGTTGAC 57.543 29.630 33.48 19.11 45.02 3.18
2522 2532 7.800847 TCAACATGTATTTGTACAATGTTGACG 59.199 33.333 31.66 18.38 43.36 4.35
2523 2533 7.197071 ACATGTATTTGTACAATGTTGACGT 57.803 32.000 9.56 0.00 33.21 4.34
2524 2534 7.295201 ACATGTATTTGTACAATGTTGACGTC 58.705 34.615 9.56 9.11 33.21 4.34
2525 2535 7.172532 ACATGTATTTGTACAATGTTGACGTCT 59.827 33.333 17.92 0.00 33.21 4.18
2526 2536 8.652463 CATGTATTTGTACAATGTTGACGTCTA 58.348 33.333 17.92 6.32 33.21 2.59
2527 2537 8.766000 TGTATTTGTACAATGTTGACGTCTAT 57.234 30.769 17.92 5.94 0.00 1.98
2528 2538 9.210329 TGTATTTGTACAATGTTGACGTCTATT 57.790 29.630 17.92 11.59 0.00 1.73
2581 2591 8.900983 CATTTCTTTTAAAGTGGAAATGGGAA 57.099 30.769 25.44 7.24 45.06 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 8.936864 GTGAGTTGCTAGTAGTGTTGATTATTT 58.063 33.333 0.00 0.00 0.00 1.40
63 64 7.611770 TGTGAGTTGCTAGTAGTGTTGATTAT 58.388 34.615 0.00 0.00 0.00 1.28
84 85 4.908601 AACATCAGATTGGTACCTGTGA 57.091 40.909 14.36 8.45 0.00 3.58
379 381 3.976490 CTGTCTCGTGGGCCCCCTA 62.976 68.421 22.27 0.00 36.94 3.53
518 525 3.686016 TCTGCATAACTCCAAAAGTCCC 58.314 45.455 0.00 0.00 37.17 4.46
533 540 8.664079 AGTAAATATTAGAGACCCATTCTGCAT 58.336 33.333 0.00 0.00 33.22 3.96
542 549 9.901172 TGGAAAAAGAGTAAATATTAGAGACCC 57.099 33.333 0.00 0.00 0.00 4.46
557 564 3.532641 ATTCTGGGCTGGAAAAAGAGT 57.467 42.857 0.00 0.00 0.00 3.24
561 568 3.244181 GCTGAAATTCTGGGCTGGAAAAA 60.244 43.478 2.18 0.00 0.00 1.94
579 586 2.124983 GAGAATGCCGGCAGCTGA 60.125 61.111 35.36 11.21 44.23 4.26
626 633 9.632638 AATGTCACAATACTTATGCCTATTCTT 57.367 29.630 0.00 0.00 0.00 2.52
688 695 8.051909 CGTTCATTTTGCATCATGCTTTTATAC 58.948 33.333 11.84 0.71 45.31 1.47
721 728 6.714810 GTCTACATGATACTCTGTCTCATCCT 59.285 42.308 0.00 0.00 29.08 3.24
724 731 9.283768 CTTAGTCTACATGATACTCTGTCTCAT 57.716 37.037 0.00 0.00 31.15 2.90
725 732 7.717436 CCTTAGTCTACATGATACTCTGTCTCA 59.283 40.741 0.00 0.00 0.00 3.27
726 733 7.308348 GCCTTAGTCTACATGATACTCTGTCTC 60.308 44.444 0.00 0.00 0.00 3.36
727 734 6.488683 GCCTTAGTCTACATGATACTCTGTCT 59.511 42.308 0.00 0.00 0.00 3.41
728 735 6.263392 TGCCTTAGTCTACATGATACTCTGTC 59.737 42.308 0.00 0.00 0.00 3.51
729 736 6.129874 TGCCTTAGTCTACATGATACTCTGT 58.870 40.000 0.00 0.00 0.00 3.41
730 737 6.641169 TGCCTTAGTCTACATGATACTCTG 57.359 41.667 0.00 0.00 0.00 3.35
731 738 7.661536 TTTGCCTTAGTCTACATGATACTCT 57.338 36.000 0.00 0.00 0.00 3.24
732 739 7.042389 GCTTTTGCCTTAGTCTACATGATACTC 60.042 40.741 0.00 0.00 40.15 2.59
733 740 6.763610 GCTTTTGCCTTAGTCTACATGATACT 59.236 38.462 0.00 2.07 40.15 2.12
734 741 6.292381 CGCTTTTGCCTTAGTCTACATGATAC 60.292 42.308 0.00 0.00 43.93 2.24
735 742 5.753438 CGCTTTTGCCTTAGTCTACATGATA 59.247 40.000 0.00 0.00 43.93 2.15
736 743 4.572389 CGCTTTTGCCTTAGTCTACATGAT 59.428 41.667 0.00 0.00 43.93 2.45
737 744 3.932710 CGCTTTTGCCTTAGTCTACATGA 59.067 43.478 0.00 0.00 43.93 3.07
738 745 3.485877 GCGCTTTTGCCTTAGTCTACATG 60.486 47.826 0.00 0.00 43.93 3.21
739 746 2.678336 GCGCTTTTGCCTTAGTCTACAT 59.322 45.455 0.00 0.00 43.93 2.29
740 747 2.073816 GCGCTTTTGCCTTAGTCTACA 58.926 47.619 0.00 0.00 43.93 2.74
741 748 2.347731 AGCGCTTTTGCCTTAGTCTAC 58.652 47.619 2.64 0.00 43.93 2.59
742 749 2.762535 AGCGCTTTTGCCTTAGTCTA 57.237 45.000 2.64 0.00 43.93 2.59
743 750 1.807142 GAAGCGCTTTTGCCTTAGTCT 59.193 47.619 25.84 0.00 43.93 3.24
744 751 1.464189 CGAAGCGCTTTTGCCTTAGTC 60.464 52.381 25.84 6.20 43.93 2.59
776 783 0.890996 CGGCAACTTCCAGGCTTTCT 60.891 55.000 0.00 0.00 0.00 2.52
811 818 2.651455 CCAGTCATCTCCGGTGTACTA 58.349 52.381 0.00 0.00 0.00 1.82
858 865 6.702716 AGGATTCTCCTTCTAGTTACTTCG 57.297 41.667 0.00 0.00 46.91 3.79
893 900 1.747145 CGGAGATGCCATGCTCTCT 59.253 57.895 14.20 4.20 38.36 3.10
900 907 0.608856 TGTTGTTGCGGAGATGCCAT 60.609 50.000 0.00 0.00 35.94 4.40
936 943 6.216569 CACAGAGACAGTAACTGAAGCTTTA 58.783 40.000 0.00 0.00 35.18 1.85
1110 1117 1.261619 GCGTCTGTGTTCAGTTTCCAG 59.738 52.381 0.00 0.00 41.91 3.86
1139 1146 1.229975 CGCTTGTCCATCAGTGCACA 61.230 55.000 21.04 0.00 0.00 4.57
1149 1156 4.680237 CCGGCAGACGCTTGTCCA 62.680 66.667 0.00 0.00 43.97 4.02
1317 1324 1.797635 GCAAGAGAAGCACAGTCAGTC 59.202 52.381 0.00 0.00 0.00 3.51
1337 1344 7.330946 TGTTCGGTGATTCAGATTTTAGTAGTG 59.669 37.037 0.00 0.00 0.00 2.74
1348 1358 3.436704 GCTGATTTGTTCGGTGATTCAGA 59.563 43.478 0.00 0.00 32.85 3.27
1378 1388 7.361542 GGCAAGTCTAATATCAGCAATGGTATG 60.362 40.741 0.00 0.00 0.00 2.39
1397 1407 2.294233 TGAAAGTTCTGCATGGCAAGTC 59.706 45.455 0.00 0.00 38.41 3.01
1403 1413 3.063510 TCTCCTGAAAGTTCTGCATGG 57.936 47.619 0.00 0.00 0.00 3.66
1449 1459 3.585020 TGCGCCACACTGTTGCAG 61.585 61.111 4.18 0.00 37.52 4.41
1527 1537 3.389983 TGGTAACCAAGGGAAGGATATCG 59.610 47.826 0.00 0.00 0.00 2.92
1563 1573 4.825085 GGGACTTACAACCTGATCAAACAA 59.175 41.667 0.00 0.00 0.00 2.83
1583 1593 2.038863 TTGAGGAAAGCCACTAGGGA 57.961 50.000 0.00 0.00 40.01 4.20
1621 1631 1.202758 TGCCCTCACAAACCAGTAGTG 60.203 52.381 0.00 0.00 34.67 2.74
1622 1632 1.136828 TGCCCTCACAAACCAGTAGT 58.863 50.000 0.00 0.00 0.00 2.73
1623 1633 2.026822 AGATGCCCTCACAAACCAGTAG 60.027 50.000 0.00 0.00 0.00 2.57
1624 1634 1.985159 AGATGCCCTCACAAACCAGTA 59.015 47.619 0.00 0.00 0.00 2.74
1625 1635 0.773644 AGATGCCCTCACAAACCAGT 59.226 50.000 0.00 0.00 0.00 4.00
1626 1636 1.171308 CAGATGCCCTCACAAACCAG 58.829 55.000 0.00 0.00 0.00 4.00
1627 1637 0.895100 GCAGATGCCCTCACAAACCA 60.895 55.000 0.00 0.00 34.31 3.67
1628 1638 0.895100 TGCAGATGCCCTCACAAACC 60.895 55.000 1.72 0.00 41.18 3.27
1629 1639 0.961019 TTGCAGATGCCCTCACAAAC 59.039 50.000 1.72 0.00 41.18 2.93
1630 1640 0.961019 GTTGCAGATGCCCTCACAAA 59.039 50.000 1.72 0.00 41.18 2.83
1631 1641 1.236616 CGTTGCAGATGCCCTCACAA 61.237 55.000 1.72 0.00 41.18 3.33
1632 1642 1.672030 CGTTGCAGATGCCCTCACA 60.672 57.895 1.72 0.00 41.18 3.58
1633 1643 2.401766 CCGTTGCAGATGCCCTCAC 61.402 63.158 1.72 0.00 41.18 3.51
1634 1644 2.046023 CCGTTGCAGATGCCCTCA 60.046 61.111 1.72 0.00 41.18 3.86
1635 1645 1.377202 TTCCGTTGCAGATGCCCTC 60.377 57.895 1.72 0.00 41.18 4.30
1636 1646 1.675641 GTTCCGTTGCAGATGCCCT 60.676 57.895 1.72 0.00 41.18 5.19
1637 1647 1.648467 GAGTTCCGTTGCAGATGCCC 61.648 60.000 1.72 0.00 41.18 5.36
1638 1648 0.674895 AGAGTTCCGTTGCAGATGCC 60.675 55.000 1.72 0.00 41.18 4.40
1639 1649 1.129437 GAAGAGTTCCGTTGCAGATGC 59.871 52.381 0.00 0.00 42.50 3.91
1640 1650 2.693069 AGAAGAGTTCCGTTGCAGATG 58.307 47.619 0.00 0.00 0.00 2.90
1641 1651 3.409026 AAGAAGAGTTCCGTTGCAGAT 57.591 42.857 0.00 0.00 0.00 2.90
1642 1652 2.910688 AAGAAGAGTTCCGTTGCAGA 57.089 45.000 0.00 0.00 0.00 4.26
1643 1653 5.179368 TCAAATAAGAAGAGTTCCGTTGCAG 59.821 40.000 0.00 0.00 0.00 4.41
1644 1654 5.060506 TCAAATAAGAAGAGTTCCGTTGCA 58.939 37.500 0.00 0.00 0.00 4.08
1645 1655 5.607119 TCAAATAAGAAGAGTTCCGTTGC 57.393 39.130 0.00 0.00 0.00 4.17
1646 1656 5.409826 AGCTCAAATAAGAAGAGTTCCGTTG 59.590 40.000 0.00 0.00 0.00 4.10
1647 1657 5.552178 AGCTCAAATAAGAAGAGTTCCGTT 58.448 37.500 0.00 0.00 0.00 4.44
1648 1658 5.153950 AGCTCAAATAAGAAGAGTTCCGT 57.846 39.130 0.00 0.00 0.00 4.69
1649 1659 5.163814 CCAAGCTCAAATAAGAAGAGTTCCG 60.164 44.000 0.00 0.00 0.00 4.30
1650 1660 5.940470 TCCAAGCTCAAATAAGAAGAGTTCC 59.060 40.000 0.00 0.00 0.00 3.62
1651 1661 7.414984 CCATCCAAGCTCAAATAAGAAGAGTTC 60.415 40.741 0.00 0.00 0.00 3.01
1652 1662 6.376581 CCATCCAAGCTCAAATAAGAAGAGTT 59.623 38.462 0.00 0.00 0.00 3.01
1653 1663 5.884792 CCATCCAAGCTCAAATAAGAAGAGT 59.115 40.000 0.00 0.00 0.00 3.24
1654 1664 6.118170 TCCATCCAAGCTCAAATAAGAAGAG 58.882 40.000 0.00 0.00 0.00 2.85
1655 1665 6.065976 TCCATCCAAGCTCAAATAAGAAGA 57.934 37.500 0.00 0.00 0.00 2.87
1656 1666 6.600822 TCTTCCATCCAAGCTCAAATAAGAAG 59.399 38.462 0.00 0.00 0.00 2.85
1657 1667 6.484288 TCTTCCATCCAAGCTCAAATAAGAA 58.516 36.000 0.00 0.00 0.00 2.52
1658 1668 6.065976 TCTTCCATCCAAGCTCAAATAAGA 57.934 37.500 0.00 0.00 0.00 2.10
1659 1669 5.298777 CCTCTTCCATCCAAGCTCAAATAAG 59.701 44.000 0.00 0.00 0.00 1.73
1660 1670 5.195940 CCTCTTCCATCCAAGCTCAAATAA 58.804 41.667 0.00 0.00 0.00 1.40
1661 1671 4.228210 ACCTCTTCCATCCAAGCTCAAATA 59.772 41.667 0.00 0.00 0.00 1.40
1662 1672 3.011032 ACCTCTTCCATCCAAGCTCAAAT 59.989 43.478 0.00 0.00 0.00 2.32
1663 1673 2.376518 ACCTCTTCCATCCAAGCTCAAA 59.623 45.455 0.00 0.00 0.00 2.69
1664 1674 1.988107 ACCTCTTCCATCCAAGCTCAA 59.012 47.619 0.00 0.00 0.00 3.02
1665 1675 1.661463 ACCTCTTCCATCCAAGCTCA 58.339 50.000 0.00 0.00 0.00 4.26
1666 1676 2.637947 GAACCTCTTCCATCCAAGCTC 58.362 52.381 0.00 0.00 0.00 4.09
1667 1677 1.065854 CGAACCTCTTCCATCCAAGCT 60.066 52.381 0.00 0.00 0.00 3.74
1668 1678 1.066143 TCGAACCTCTTCCATCCAAGC 60.066 52.381 0.00 0.00 0.00 4.01
1669 1679 3.334583 TTCGAACCTCTTCCATCCAAG 57.665 47.619 0.00 0.00 0.00 3.61
1670 1680 3.780804 TTTCGAACCTCTTCCATCCAA 57.219 42.857 0.00 0.00 0.00 3.53
1671 1681 5.183228 GTTATTTCGAACCTCTTCCATCCA 58.817 41.667 0.00 0.00 0.00 3.41
1672 1682 4.575236 GGTTATTTCGAACCTCTTCCATCC 59.425 45.833 0.00 0.00 44.75 3.51
1673 1683 5.736486 GGTTATTTCGAACCTCTTCCATC 57.264 43.478 0.00 0.00 44.75 3.51
1683 1693 2.034001 CCGATCGCTGGTTATTTCGAAC 60.034 50.000 10.32 0.00 34.50 3.95
1684 1694 2.159212 TCCGATCGCTGGTTATTTCGAA 60.159 45.455 10.32 0.00 34.50 3.71
1685 1695 1.406180 TCCGATCGCTGGTTATTTCGA 59.594 47.619 10.32 0.00 35.34 3.71
1686 1696 1.521423 GTCCGATCGCTGGTTATTTCG 59.479 52.381 10.32 0.00 0.00 3.46
1687 1697 2.822764 AGTCCGATCGCTGGTTATTTC 58.177 47.619 10.32 0.00 0.00 2.17
1688 1698 2.981859 AGTCCGATCGCTGGTTATTT 57.018 45.000 10.32 0.00 0.00 1.40
1689 1699 2.288273 GCTAGTCCGATCGCTGGTTATT 60.288 50.000 10.32 0.00 0.00 1.40
1690 1700 1.269998 GCTAGTCCGATCGCTGGTTAT 59.730 52.381 10.32 0.00 0.00 1.89
1691 1701 0.666913 GCTAGTCCGATCGCTGGTTA 59.333 55.000 10.32 0.00 0.00 2.85
1692 1702 1.320344 TGCTAGTCCGATCGCTGGTT 61.320 55.000 10.32 0.00 0.00 3.67
1693 1703 1.320344 TTGCTAGTCCGATCGCTGGT 61.320 55.000 10.32 0.00 0.00 4.00
1694 1704 0.872021 GTTGCTAGTCCGATCGCTGG 60.872 60.000 10.32 5.66 0.00 4.85
1695 1705 0.101399 AGTTGCTAGTCCGATCGCTG 59.899 55.000 10.32 0.00 0.00 5.18
1696 1706 0.382515 GAGTTGCTAGTCCGATCGCT 59.617 55.000 10.32 4.94 0.00 4.93
1697 1707 0.100682 TGAGTTGCTAGTCCGATCGC 59.899 55.000 10.32 0.00 0.00 4.58
1698 1708 1.534175 GGTGAGTTGCTAGTCCGATCG 60.534 57.143 8.51 8.51 0.00 3.69
1699 1709 1.751924 AGGTGAGTTGCTAGTCCGATC 59.248 52.381 0.38 0.00 0.00 3.69
1700 1710 1.853963 AGGTGAGTTGCTAGTCCGAT 58.146 50.000 0.38 0.00 0.00 4.18
1701 1711 1.272490 CAAGGTGAGTTGCTAGTCCGA 59.728 52.381 0.38 0.00 0.00 4.55
1702 1712 1.714794 CAAGGTGAGTTGCTAGTCCG 58.285 55.000 0.38 0.00 0.00 4.79
1710 1720 2.746269 CAATGGTTGCAAGGTGAGTTG 58.254 47.619 0.00 0.00 0.00 3.16
1722 1732 2.028839 TGATCAAGCTTGGCAATGGTTG 60.029 45.455 25.73 23.44 41.36 3.77
1723 1733 2.250031 TGATCAAGCTTGGCAATGGTT 58.750 42.857 25.73 4.40 0.00 3.67
1724 1734 1.927487 TGATCAAGCTTGGCAATGGT 58.073 45.000 25.73 0.00 0.00 3.55
1725 1735 2.418197 CCTTGATCAAGCTTGGCAATGG 60.418 50.000 27.01 22.92 37.11 3.16
1726 1736 2.232941 ACCTTGATCAAGCTTGGCAATG 59.767 45.455 27.01 24.08 37.11 2.82
1727 1737 2.232941 CACCTTGATCAAGCTTGGCAAT 59.767 45.455 27.01 12.51 37.11 3.56
1728 1738 1.614903 CACCTTGATCAAGCTTGGCAA 59.385 47.619 27.01 24.86 37.11 4.52
1729 1739 1.250328 CACCTTGATCAAGCTTGGCA 58.750 50.000 27.01 20.18 37.11 4.92
1730 1740 0.529378 CCACCTTGATCAAGCTTGGC 59.471 55.000 28.16 17.95 35.01 4.52
1731 1741 1.815003 GTCCACCTTGATCAAGCTTGG 59.185 52.381 30.87 30.87 39.52 3.61
1732 1742 1.466167 CGTCCACCTTGATCAAGCTTG 59.534 52.381 27.01 23.36 37.11 4.01
1733 1743 1.813513 CGTCCACCTTGATCAAGCTT 58.186 50.000 27.01 14.65 37.11 3.74
1734 1744 0.674895 GCGTCCACCTTGATCAAGCT 60.675 55.000 27.01 13.39 37.11 3.74
1735 1745 0.955428 TGCGTCCACCTTGATCAAGC 60.955 55.000 27.01 16.45 37.11 4.01
1736 1746 1.667724 GATGCGTCCACCTTGATCAAG 59.332 52.381 25.75 25.75 38.14 3.02
1737 1747 1.678728 GGATGCGTCCACCTTGATCAA 60.679 52.381 20.55 8.12 44.42 2.57
1738 1748 0.107703 GGATGCGTCCACCTTGATCA 60.108 55.000 20.55 0.00 44.42 2.92
1739 1749 2.695314 GGATGCGTCCACCTTGATC 58.305 57.895 20.55 0.00 44.42 2.92
1740 1750 4.963878 GGATGCGTCCACCTTGAT 57.036 55.556 20.55 0.00 44.42 2.57
1748 1758 0.960364 TTTGCCTCTTGGATGCGTCC 60.960 55.000 18.69 18.69 45.31 4.79
1749 1759 1.098050 ATTTGCCTCTTGGATGCGTC 58.902 50.000 0.00 0.00 34.57 5.19
1750 1760 2.418368 TATTTGCCTCTTGGATGCGT 57.582 45.000 0.00 0.00 34.57 5.24
1751 1761 2.880268 TCATATTTGCCTCTTGGATGCG 59.120 45.455 0.00 0.00 34.57 4.73
1752 1762 4.082354 GGATCATATTTGCCTCTTGGATGC 60.082 45.833 0.00 0.00 34.57 3.91
1753 1763 5.322754 AGGATCATATTTGCCTCTTGGATG 58.677 41.667 0.00 0.00 34.57 3.51
1754 1764 5.595814 AGGATCATATTTGCCTCTTGGAT 57.404 39.130 0.00 0.00 34.57 3.41
1755 1765 5.393068 AAGGATCATATTTGCCTCTTGGA 57.607 39.130 0.00 0.00 34.57 3.53
1756 1766 6.944290 TGATAAGGATCATATTTGCCTCTTGG 59.056 38.462 0.00 0.00 37.15 3.61
1757 1767 7.446319 TGTGATAAGGATCATATTTGCCTCTTG 59.554 37.037 0.00 0.00 43.95 3.02
1758 1768 7.520798 TGTGATAAGGATCATATTTGCCTCTT 58.479 34.615 0.00 0.00 43.95 2.85
1759 1769 7.083062 TGTGATAAGGATCATATTTGCCTCT 57.917 36.000 0.00 0.00 43.95 3.69
1760 1770 7.201591 CGATGTGATAAGGATCATATTTGCCTC 60.202 40.741 0.00 0.00 42.23 4.70
1761 1771 6.596888 CGATGTGATAAGGATCATATTTGCCT 59.403 38.462 0.00 0.00 42.23 4.75
1762 1772 6.183360 CCGATGTGATAAGGATCATATTTGCC 60.183 42.308 0.00 0.00 42.23 4.52
1763 1773 6.595326 TCCGATGTGATAAGGATCATATTTGC 59.405 38.462 0.00 0.00 42.23 3.68
1764 1774 8.728337 ATCCGATGTGATAAGGATCATATTTG 57.272 34.615 0.00 0.00 42.23 2.32
1772 1782 3.119814 CGACGATCCGATGTGATAAGGAT 60.120 47.826 0.00 0.00 45.32 3.24
1773 1783 2.225727 CGACGATCCGATGTGATAAGGA 59.774 50.000 0.00 0.00 37.17 3.36
1774 1784 2.031069 ACGACGATCCGATGTGATAAGG 60.031 50.000 0.00 0.00 0.00 2.69
1775 1785 2.973879 CACGACGATCCGATGTGATAAG 59.026 50.000 0.00 0.00 37.56 1.73
1776 1786 2.857104 GCACGACGATCCGATGTGATAA 60.857 50.000 0.00 0.00 37.56 1.75
1777 1787 1.334689 GCACGACGATCCGATGTGATA 60.335 52.381 0.00 0.00 37.56 2.15
1778 1788 0.595053 GCACGACGATCCGATGTGAT 60.595 55.000 0.00 0.00 37.56 3.06
1779 1789 1.226575 GCACGACGATCCGATGTGA 60.227 57.895 0.00 0.00 37.56 3.58
1780 1790 2.230940 GGCACGACGATCCGATGTG 61.231 63.158 0.00 0.00 38.04 3.21
1781 1791 2.104331 GGCACGACGATCCGATGT 59.896 61.111 0.00 0.00 0.00 3.06
1782 1792 2.658593 GGGCACGACGATCCGATG 60.659 66.667 0.00 0.00 0.00 3.84
1783 1793 3.144871 TGGGCACGACGATCCGAT 61.145 61.111 0.00 0.00 0.00 4.18
1784 1794 4.124351 GTGGGCACGACGATCCGA 62.124 66.667 0.00 0.00 0.00 4.55
1785 1795 4.129737 AGTGGGCACGACGATCCG 62.130 66.667 0.00 0.00 43.51 4.18
1786 1796 2.202756 GAGTGGGCACGACGATCC 60.203 66.667 0.00 1.34 43.51 3.36
1787 1797 2.579787 CGAGTGGGCACGACGATC 60.580 66.667 0.00 0.00 43.51 3.69
1788 1798 3.052620 CTCGAGTGGGCACGACGAT 62.053 63.158 3.62 0.00 43.51 3.73
1789 1799 3.733960 CTCGAGTGGGCACGACGA 61.734 66.667 3.62 1.06 43.51 4.20
1790 1800 4.778415 CCTCGAGTGGGCACGACG 62.778 72.222 12.31 0.00 43.51 5.12
1791 1801 3.628280 GACCTCGAGTGGGCACGAC 62.628 68.421 12.31 0.00 37.31 4.34
1792 1802 2.473891 TAGACCTCGAGTGGGCACGA 62.474 60.000 12.31 0.00 37.66 4.35
1793 1803 1.994507 CTAGACCTCGAGTGGGCACG 61.995 65.000 12.31 0.00 37.66 5.34
1794 1804 1.810532 CTAGACCTCGAGTGGGCAC 59.189 63.158 12.31 0.00 37.66 5.01
1795 1805 2.052690 GCTAGACCTCGAGTGGGCA 61.053 63.158 12.31 0.00 37.66 5.36
1796 1806 1.605058 TTGCTAGACCTCGAGTGGGC 61.605 60.000 12.31 0.00 34.64 5.36
1797 1807 0.173708 GTTGCTAGACCTCGAGTGGG 59.826 60.000 12.31 0.00 0.00 4.61
1798 1808 0.888619 TGTTGCTAGACCTCGAGTGG 59.111 55.000 12.31 0.00 0.00 4.00
1799 1809 2.164422 TGATGTTGCTAGACCTCGAGTG 59.836 50.000 12.31 5.52 0.00 3.51
1800 1810 2.425312 CTGATGTTGCTAGACCTCGAGT 59.575 50.000 12.31 0.00 0.00 4.18
1801 1811 2.425312 ACTGATGTTGCTAGACCTCGAG 59.575 50.000 5.13 5.13 0.00 4.04
1802 1812 2.447443 ACTGATGTTGCTAGACCTCGA 58.553 47.619 0.00 0.00 0.00 4.04
1803 1813 2.949451 ACTGATGTTGCTAGACCTCG 57.051 50.000 0.00 0.00 0.00 4.63
1804 1814 3.929610 GTGAACTGATGTTGCTAGACCTC 59.070 47.826 0.00 0.00 36.39 3.85
1805 1815 3.307059 GGTGAACTGATGTTGCTAGACCT 60.307 47.826 0.00 0.00 36.39 3.85
1806 1816 3.003480 GGTGAACTGATGTTGCTAGACC 58.997 50.000 0.00 0.00 36.39 3.85
1807 1817 3.003480 GGGTGAACTGATGTTGCTAGAC 58.997 50.000 0.00 0.00 36.39 2.59
1808 1818 2.637382 TGGGTGAACTGATGTTGCTAGA 59.363 45.455 0.00 0.00 36.39 2.43
1809 1819 3.057969 TGGGTGAACTGATGTTGCTAG 57.942 47.619 0.00 0.00 36.39 3.42
1810 1820 3.500448 TTGGGTGAACTGATGTTGCTA 57.500 42.857 0.00 0.00 36.39 3.49
1811 1821 2.362077 GTTTGGGTGAACTGATGTTGCT 59.638 45.455 0.00 0.00 36.39 3.91
1812 1822 2.545742 GGTTTGGGTGAACTGATGTTGC 60.546 50.000 0.00 0.00 36.39 4.17
1813 1823 2.692557 TGGTTTGGGTGAACTGATGTTG 59.307 45.455 0.00 0.00 36.39 3.33
1814 1824 3.025322 TGGTTTGGGTGAACTGATGTT 57.975 42.857 0.00 0.00 39.42 2.71
1815 1825 2.746279 TGGTTTGGGTGAACTGATGT 57.254 45.000 0.00 0.00 0.00 3.06
1816 1826 2.353011 GCATGGTTTGGGTGAACTGATG 60.353 50.000 0.00 0.00 0.00 3.07
1817 1827 1.895131 GCATGGTTTGGGTGAACTGAT 59.105 47.619 0.00 0.00 0.00 2.90
1818 1828 1.327303 GCATGGTTTGGGTGAACTGA 58.673 50.000 0.00 0.00 0.00 3.41
1819 1829 1.039068 TGCATGGTTTGGGTGAACTG 58.961 50.000 0.00 0.00 0.00 3.16
1820 1830 1.412343 GTTGCATGGTTTGGGTGAACT 59.588 47.619 0.00 0.00 0.00 3.01
1821 1831 1.137872 TGTTGCATGGTTTGGGTGAAC 59.862 47.619 0.00 0.00 0.00 3.18
1822 1832 1.411977 CTGTTGCATGGTTTGGGTGAA 59.588 47.619 0.00 0.00 0.00 3.18
1823 1833 1.039068 CTGTTGCATGGTTTGGGTGA 58.961 50.000 0.00 0.00 0.00 4.02
1824 1834 1.039068 TCTGTTGCATGGTTTGGGTG 58.961 50.000 0.00 0.00 0.00 4.61
1825 1835 1.688197 CTTCTGTTGCATGGTTTGGGT 59.312 47.619 0.00 0.00 0.00 4.51
1826 1836 1.962807 TCTTCTGTTGCATGGTTTGGG 59.037 47.619 0.00 0.00 0.00 4.12
1827 1837 3.256383 TGATCTTCTGTTGCATGGTTTGG 59.744 43.478 0.00 0.00 0.00 3.28
1828 1838 4.508461 TGATCTTCTGTTGCATGGTTTG 57.492 40.909 0.00 0.00 0.00 2.93
1829 1839 4.619863 GCATGATCTTCTGTTGCATGGTTT 60.620 41.667 0.00 0.00 37.42 3.27
1830 1840 3.119245 GCATGATCTTCTGTTGCATGGTT 60.119 43.478 0.00 0.00 37.42 3.67
1831 1841 2.426024 GCATGATCTTCTGTTGCATGGT 59.574 45.455 0.00 0.00 37.42 3.55
1832 1842 2.223735 GGCATGATCTTCTGTTGCATGG 60.224 50.000 0.00 0.00 37.42 3.66
1833 1843 2.223735 GGGCATGATCTTCTGTTGCATG 60.224 50.000 0.00 0.00 39.35 4.06
1834 1844 2.029623 GGGCATGATCTTCTGTTGCAT 58.970 47.619 0.00 0.00 35.04 3.96
1835 1845 1.272037 TGGGCATGATCTTCTGTTGCA 60.272 47.619 0.00 0.00 35.04 4.08
1836 1846 1.466856 TGGGCATGATCTTCTGTTGC 58.533 50.000 0.00 0.00 0.00 4.17
1837 1847 2.426024 CCTTGGGCATGATCTTCTGTTG 59.574 50.000 0.00 0.00 0.00 3.33
1838 1848 2.042162 ACCTTGGGCATGATCTTCTGTT 59.958 45.455 0.00 0.00 0.00 3.16
1839 1849 1.637553 ACCTTGGGCATGATCTTCTGT 59.362 47.619 0.00 0.00 0.00 3.41
1840 1850 2.022195 CACCTTGGGCATGATCTTCTG 58.978 52.381 0.00 0.00 0.00 3.02
1841 1851 1.637553 ACACCTTGGGCATGATCTTCT 59.362 47.619 0.00 0.00 0.00 2.85
1842 1852 2.134789 ACACCTTGGGCATGATCTTC 57.865 50.000 0.00 0.00 0.00 2.87
1843 1853 2.610438 AACACCTTGGGCATGATCTT 57.390 45.000 0.00 0.00 0.00 2.40
1844 1854 2.610438 AAACACCTTGGGCATGATCT 57.390 45.000 0.00 0.00 0.00 2.75
1845 1855 2.689983 CCTAAACACCTTGGGCATGATC 59.310 50.000 0.00 0.00 0.00 2.92
1846 1856 2.738743 CCTAAACACCTTGGGCATGAT 58.261 47.619 0.00 0.00 0.00 2.45
1847 1857 2.214376 CCTAAACACCTTGGGCATGA 57.786 50.000 0.00 0.00 0.00 3.07
1852 1862 0.603065 GCAAGCCTAAACACCTTGGG 59.397 55.000 0.00 0.00 38.70 4.12
1853 1863 1.327303 TGCAAGCCTAAACACCTTGG 58.673 50.000 0.00 0.00 37.14 3.61
1854 1864 3.451141 TTTGCAAGCCTAAACACCTTG 57.549 42.857 0.00 0.00 39.08 3.61
1855 1865 4.141733 ACAATTTGCAAGCCTAAACACCTT 60.142 37.500 0.00 0.00 0.00 3.50
1856 1866 3.387699 ACAATTTGCAAGCCTAAACACCT 59.612 39.130 0.00 0.00 0.00 4.00
1857 1867 3.494251 CACAATTTGCAAGCCTAAACACC 59.506 43.478 0.00 0.00 0.00 4.16
1858 1868 3.494251 CCACAATTTGCAAGCCTAAACAC 59.506 43.478 0.00 0.00 0.00 3.32
1859 1869 3.726607 CCACAATTTGCAAGCCTAAACA 58.273 40.909 0.00 0.00 0.00 2.83
2099 2109 3.578282 TCTGGTTGACAAGAGACATAGCA 59.422 43.478 0.00 0.00 0.00 3.49
2100 2110 4.180057 CTCTGGTTGACAAGAGACATAGC 58.820 47.826 9.51 0.00 30.61 2.97
2101 2111 4.464244 TCCTCTGGTTGACAAGAGACATAG 59.536 45.833 15.58 0.88 30.61 2.23
2102 2112 4.416516 TCCTCTGGTTGACAAGAGACATA 58.583 43.478 15.58 0.00 30.61 2.29
2103 2113 3.242867 TCCTCTGGTTGACAAGAGACAT 58.757 45.455 15.58 0.00 30.61 3.06
2104 2114 2.677914 TCCTCTGGTTGACAAGAGACA 58.322 47.619 15.58 1.11 30.61 3.41
2105 2115 3.556004 CCTTCCTCTGGTTGACAAGAGAC 60.556 52.174 15.58 0.00 30.61 3.36
2106 2116 2.634940 CCTTCCTCTGGTTGACAAGAGA 59.365 50.000 15.58 1.39 30.61 3.10
2107 2117 2.289945 CCCTTCCTCTGGTTGACAAGAG 60.290 54.545 8.33 8.33 0.00 2.85
2108 2118 1.699634 CCCTTCCTCTGGTTGACAAGA 59.300 52.381 0.00 0.00 0.00 3.02
2109 2119 1.884067 GCCCTTCCTCTGGTTGACAAG 60.884 57.143 0.00 0.00 0.00 3.16
2110 2120 0.110486 GCCCTTCCTCTGGTTGACAA 59.890 55.000 0.00 0.00 0.00 3.18
2111 2121 0.768221 AGCCCTTCCTCTGGTTGACA 60.768 55.000 0.00 0.00 0.00 3.58
2112 2122 0.035915 GAGCCCTTCCTCTGGTTGAC 60.036 60.000 0.00 0.00 0.00 3.18
2113 2123 0.178891 AGAGCCCTTCCTCTGGTTGA 60.179 55.000 0.00 0.00 40.55 3.18
2114 2124 0.251634 GAGAGCCCTTCCTCTGGTTG 59.748 60.000 0.00 0.00 42.06 3.77
2115 2125 0.178891 TGAGAGCCCTTCCTCTGGTT 60.179 55.000 0.00 0.00 42.06 3.67
2116 2126 0.907230 GTGAGAGCCCTTCCTCTGGT 60.907 60.000 0.00 0.00 42.06 4.00
2117 2127 1.621672 GGTGAGAGCCCTTCCTCTGG 61.622 65.000 0.00 0.00 42.06 3.86
2118 2128 1.621672 GGGTGAGAGCCCTTCCTCTG 61.622 65.000 0.00 0.00 45.22 3.35
2119 2129 1.306568 GGGTGAGAGCCCTTCCTCT 60.307 63.158 0.00 0.00 45.22 3.69
2120 2130 3.314951 GGGTGAGAGCCCTTCCTC 58.685 66.667 0.00 0.00 45.22 3.71
2127 2137 0.254178 ACATGTCATGGGTGAGAGCC 59.746 55.000 17.08 0.00 34.36 4.70
2128 2138 2.119801 AACATGTCATGGGTGAGAGC 57.880 50.000 17.08 0.00 34.36 4.09
2129 2139 3.055167 TGGTAACATGTCATGGGTGAGAG 60.055 47.826 17.08 0.00 46.17 3.20
2130 2140 2.909662 TGGTAACATGTCATGGGTGAGA 59.090 45.455 17.08 0.00 46.17 3.27
2131 2141 3.348647 TGGTAACATGTCATGGGTGAG 57.651 47.619 17.08 0.00 46.17 3.51
2145 2155 1.474498 CCTAGCCCGACCAATGGTAAC 60.474 57.143 4.23 0.00 35.25 2.50
2146 2156 0.834612 CCTAGCCCGACCAATGGTAA 59.165 55.000 4.23 0.00 35.25 2.85
2147 2157 0.325860 ACCTAGCCCGACCAATGGTA 60.326 55.000 4.23 0.00 35.25 3.25
2148 2158 0.325860 TACCTAGCCCGACCAATGGT 60.326 55.000 3.74 3.74 39.44 3.55
2149 2159 0.393077 CTACCTAGCCCGACCAATGG 59.607 60.000 0.00 0.00 0.00 3.16
2150 2160 0.249911 GCTACCTAGCCCGACCAATG 60.250 60.000 0.00 0.00 43.39 2.82
2151 2161 1.745320 CGCTACCTAGCCCGACCAAT 61.745 60.000 0.00 0.00 46.34 3.16
2152 2162 2.420568 CGCTACCTAGCCCGACCAA 61.421 63.158 0.00 0.00 46.34 3.67
2153 2163 2.831742 CGCTACCTAGCCCGACCA 60.832 66.667 0.00 0.00 46.34 4.02
2154 2164 2.421399 AACGCTACCTAGCCCGACC 61.421 63.158 0.00 0.00 46.34 4.79
2155 2165 1.226888 CAACGCTACCTAGCCCGAC 60.227 63.158 0.00 0.00 46.34 4.79
2156 2166 0.754217 ATCAACGCTACCTAGCCCGA 60.754 55.000 0.00 0.00 46.34 5.14
2157 2167 0.104304 AATCAACGCTACCTAGCCCG 59.896 55.000 0.00 0.00 46.34 6.13
2158 2168 1.583054 CAATCAACGCTACCTAGCCC 58.417 55.000 0.00 0.00 46.34 5.19
2159 2169 0.938008 GCAATCAACGCTACCTAGCC 59.062 55.000 0.00 0.00 46.34 3.93
2160 2170 0.938008 GGCAATCAACGCTACCTAGC 59.062 55.000 0.00 0.00 45.62 3.42
2161 2171 2.205074 CTGGCAATCAACGCTACCTAG 58.795 52.381 0.00 0.00 0.00 3.02
2162 2172 1.553248 ACTGGCAATCAACGCTACCTA 59.447 47.619 0.00 0.00 0.00 3.08
2163 2173 0.324943 ACTGGCAATCAACGCTACCT 59.675 50.000 0.00 0.00 0.00 3.08
2164 2174 1.165270 AACTGGCAATCAACGCTACC 58.835 50.000 0.00 0.00 0.00 3.18
2165 2175 4.616181 AATAACTGGCAATCAACGCTAC 57.384 40.909 0.00 0.00 0.00 3.58
2166 2176 5.637006 AAAATAACTGGCAATCAACGCTA 57.363 34.783 0.00 0.00 0.00 4.26
2167 2177 4.519540 AAAATAACTGGCAATCAACGCT 57.480 36.364 0.00 0.00 0.00 5.07
2168 2178 5.286082 CACTAAAATAACTGGCAATCAACGC 59.714 40.000 0.00 0.00 0.00 4.84
2169 2179 6.607689 TCACTAAAATAACTGGCAATCAACG 58.392 36.000 0.00 0.00 0.00 4.10
2170 2180 7.816640 TCTCACTAAAATAACTGGCAATCAAC 58.183 34.615 0.00 0.00 0.00 3.18
2171 2181 7.882791 TCTCTCACTAAAATAACTGGCAATCAA 59.117 33.333 0.00 0.00 0.00 2.57
2172 2182 7.394016 TCTCTCACTAAAATAACTGGCAATCA 58.606 34.615 0.00 0.00 0.00 2.57
2173 2183 7.849804 TCTCTCACTAAAATAACTGGCAATC 57.150 36.000 0.00 0.00 0.00 2.67
2174 2184 8.049117 TGATCTCTCACTAAAATAACTGGCAAT 58.951 33.333 0.00 0.00 0.00 3.56
2175 2185 7.394016 TGATCTCTCACTAAAATAACTGGCAA 58.606 34.615 0.00 0.00 0.00 4.52
2176 2186 6.946340 TGATCTCTCACTAAAATAACTGGCA 58.054 36.000 0.00 0.00 0.00 4.92
2177 2187 7.849804 TTGATCTCTCACTAAAATAACTGGC 57.150 36.000 0.00 0.00 0.00 4.85
2178 2188 9.442047 ACTTTGATCTCTCACTAAAATAACTGG 57.558 33.333 0.00 0.00 0.00 4.00
2184 2194 9.360093 CGAAGTACTTTGATCTCTCACTAAAAT 57.640 33.333 16.75 0.00 0.00 1.82
2185 2195 8.358148 ACGAAGTACTTTGATCTCTCACTAAAA 58.642 33.333 26.47 0.00 41.94 1.52
2186 2196 7.883217 ACGAAGTACTTTGATCTCTCACTAAA 58.117 34.615 26.47 0.00 41.94 1.85
2187 2197 7.450124 ACGAAGTACTTTGATCTCTCACTAA 57.550 36.000 26.47 0.00 41.94 2.24
2188 2198 7.450124 AACGAAGTACTTTGATCTCTCACTA 57.550 36.000 26.47 0.00 45.00 2.74
2189 2199 5.968528 ACGAAGTACTTTGATCTCTCACT 57.031 39.130 26.47 0.90 41.94 3.41
2190 2200 6.748198 CCTAACGAAGTACTTTGATCTCTCAC 59.252 42.308 26.47 2.11 45.00 3.51
2191 2201 6.625300 GCCTAACGAAGTACTTTGATCTCTCA 60.625 42.308 26.47 1.76 45.00 3.27
2192 2202 5.744819 GCCTAACGAAGTACTTTGATCTCTC 59.255 44.000 26.47 3.53 45.00 3.20
2193 2203 5.419471 AGCCTAACGAAGTACTTTGATCTCT 59.581 40.000 26.47 13.98 45.00 3.10
2194 2204 5.652518 AGCCTAACGAAGTACTTTGATCTC 58.347 41.667 26.47 12.32 45.00 2.75
2195 2205 5.662674 AGCCTAACGAAGTACTTTGATCT 57.337 39.130 26.47 13.76 45.00 2.75
2196 2206 5.867716 TGAAGCCTAACGAAGTACTTTGATC 59.132 40.000 26.47 6.07 45.00 2.92
2197 2207 5.790593 TGAAGCCTAACGAAGTACTTTGAT 58.209 37.500 26.47 18.32 45.00 2.57
2198 2208 5.204409 TGAAGCCTAACGAAGTACTTTGA 57.796 39.130 26.47 6.93 45.00 2.69
2199 2209 4.389077 CCTGAAGCCTAACGAAGTACTTTG 59.611 45.833 19.53 19.53 45.00 2.77
2200 2210 4.282703 TCCTGAAGCCTAACGAAGTACTTT 59.717 41.667 10.02 0.00 45.00 2.66
2201 2211 3.830755 TCCTGAAGCCTAACGAAGTACTT 59.169 43.478 8.13 8.13 45.00 2.24
2202 2212 3.428532 TCCTGAAGCCTAACGAAGTACT 58.571 45.455 0.00 0.00 45.00 2.73
2203 2213 3.863142 TCCTGAAGCCTAACGAAGTAC 57.137 47.619 0.00 0.00 45.00 2.73
2204 2214 4.439700 CGAATCCTGAAGCCTAACGAAGTA 60.440 45.833 0.00 0.00 45.00 2.24
2206 2216 2.860735 CGAATCCTGAAGCCTAACGAAG 59.139 50.000 0.00 0.00 0.00 3.79
2207 2217 2.888594 CGAATCCTGAAGCCTAACGAA 58.111 47.619 0.00 0.00 0.00 3.85
2208 2218 1.470979 GCGAATCCTGAAGCCTAACGA 60.471 52.381 0.00 0.00 0.00 3.85
2209 2219 0.931005 GCGAATCCTGAAGCCTAACG 59.069 55.000 0.00 0.00 0.00 3.18
2210 2220 1.300481 GGCGAATCCTGAAGCCTAAC 58.700 55.000 0.00 0.00 45.67 2.34
2211 2221 0.179084 CGGCGAATCCTGAAGCCTAA 60.179 55.000 0.00 0.00 46.85 2.69
2212 2222 1.441729 CGGCGAATCCTGAAGCCTA 59.558 57.895 0.00 0.00 46.85 3.93
2213 2223 2.187946 CGGCGAATCCTGAAGCCT 59.812 61.111 0.00 0.00 46.85 4.58
2214 2224 2.897350 CCGGCGAATCCTGAAGCC 60.897 66.667 9.30 0.00 45.67 4.35
2215 2225 1.305930 AAACCGGCGAATCCTGAAGC 61.306 55.000 9.30 0.00 0.00 3.86
2216 2226 1.933853 CTAAACCGGCGAATCCTGAAG 59.066 52.381 9.30 0.00 0.00 3.02
2217 2227 2.010043 GCTAAACCGGCGAATCCTGAA 61.010 52.381 9.30 0.00 0.00 3.02
2218 2228 0.461339 GCTAAACCGGCGAATCCTGA 60.461 55.000 9.30 0.00 0.00 3.86
2219 2229 0.742990 TGCTAAACCGGCGAATCCTG 60.743 55.000 9.30 0.00 0.00 3.86
2220 2230 0.743345 GTGCTAAACCGGCGAATCCT 60.743 55.000 9.30 0.00 0.00 3.24
2221 2231 1.712018 GGTGCTAAACCGGCGAATCC 61.712 60.000 9.30 0.00 39.81 3.01
2222 2232 1.719709 GGTGCTAAACCGGCGAATC 59.280 57.895 9.30 0.00 39.81 2.52
2223 2233 3.899395 GGTGCTAAACCGGCGAAT 58.101 55.556 9.30 0.00 39.81 3.34
2231 2241 6.802608 AGTAAGAAACCAAAAGGTGCTAAAC 58.197 36.000 0.00 0.00 0.00 2.01
2232 2242 7.412853 AAGTAAGAAACCAAAAGGTGCTAAA 57.587 32.000 0.00 0.00 0.00 1.85
2233 2243 7.340999 AGAAAGTAAGAAACCAAAAGGTGCTAA 59.659 33.333 0.00 0.00 0.00 3.09
2234 2244 6.831868 AGAAAGTAAGAAACCAAAAGGTGCTA 59.168 34.615 0.00 0.00 0.00 3.49
2235 2245 5.656859 AGAAAGTAAGAAACCAAAAGGTGCT 59.343 36.000 0.00 0.00 0.00 4.40
2236 2246 5.748630 CAGAAAGTAAGAAACCAAAAGGTGC 59.251 40.000 0.00 0.00 0.00 5.01
2237 2247 5.748630 GCAGAAAGTAAGAAACCAAAAGGTG 59.251 40.000 0.00 0.00 0.00 4.00
2238 2248 5.656859 AGCAGAAAGTAAGAAACCAAAAGGT 59.343 36.000 0.00 0.00 0.00 3.50
2239 2249 6.149129 AGCAGAAAGTAAGAAACCAAAAGG 57.851 37.500 0.00 0.00 0.00 3.11
2240 2250 8.479313 AAAAGCAGAAAGTAAGAAACCAAAAG 57.521 30.769 0.00 0.00 0.00 2.27
2318 2328 9.203421 CTTAAACAACCAAGAGTTTCACTTTTT 57.797 29.630 0.00 0.00 38.71 1.94
2319 2329 8.581578 TCTTAAACAACCAAGAGTTTCACTTTT 58.418 29.630 0.00 0.00 38.71 2.27
2320 2330 8.117813 TCTTAAACAACCAAGAGTTTCACTTT 57.882 30.769 0.00 0.00 38.71 2.66
2321 2331 7.696992 TCTTAAACAACCAAGAGTTTCACTT 57.303 32.000 0.00 0.00 38.71 3.16
2322 2332 7.696992 TTCTTAAACAACCAAGAGTTTCACT 57.303 32.000 0.00 0.00 38.71 3.41
2323 2333 8.751302 TTTTCTTAAACAACCAAGAGTTTCAC 57.249 30.769 0.00 0.00 38.71 3.18
2391 2401 8.721019 AAGTTGAACACACATTCATCATTTTT 57.279 26.923 0.00 0.00 38.37 1.94
2392 2402 9.985730 ATAAGTTGAACACACATTCATCATTTT 57.014 25.926 0.00 0.00 38.37 1.82
2449 2459 9.769093 GAGCAGTTTTATAAATACGTGTTGATT 57.231 29.630 0.00 0.00 0.00 2.57
2450 2460 8.114290 CGAGCAGTTTTATAAATACGTGTTGAT 58.886 33.333 0.00 0.00 0.00 2.57
2451 2461 7.116662 ACGAGCAGTTTTATAAATACGTGTTGA 59.883 33.333 0.00 0.00 0.00 3.18
2452 2462 7.231607 ACGAGCAGTTTTATAAATACGTGTTG 58.768 34.615 0.00 0.00 0.00 3.33
2453 2463 7.355332 ACGAGCAGTTTTATAAATACGTGTT 57.645 32.000 0.00 0.00 0.00 3.32
2454 2464 6.956299 ACGAGCAGTTTTATAAATACGTGT 57.044 33.333 0.00 0.00 0.00 4.49
2455 2465 7.213706 CACAACGAGCAGTTTTATAAATACGTG 59.786 37.037 0.00 0.00 42.02 4.49
2456 2466 7.095523 ACACAACGAGCAGTTTTATAAATACGT 60.096 33.333 0.00 0.00 42.02 3.57
2457 2467 7.231607 ACACAACGAGCAGTTTTATAAATACG 58.768 34.615 0.00 0.00 42.02 3.06
2461 2471 9.601971 GAAATACACAACGAGCAGTTTTATAAA 57.398 29.630 0.00 0.00 42.02 1.40
2462 2472 8.775527 TGAAATACACAACGAGCAGTTTTATAA 58.224 29.630 0.00 0.00 42.02 0.98
2463 2473 8.312896 TGAAATACACAACGAGCAGTTTTATA 57.687 30.769 0.00 0.00 42.02 0.98
2464 2474 7.197071 TGAAATACACAACGAGCAGTTTTAT 57.803 32.000 0.00 0.00 42.02 1.40
2465 2475 6.606234 TGAAATACACAACGAGCAGTTTTA 57.394 33.333 0.00 0.00 42.02 1.52
2466 2476 5.493133 TGAAATACACAACGAGCAGTTTT 57.507 34.783 0.00 0.00 42.02 2.43
2467 2477 5.493133 TTGAAATACACAACGAGCAGTTT 57.507 34.783 0.00 0.00 42.02 2.66
2468 2478 5.295787 TCTTTGAAATACACAACGAGCAGTT 59.704 36.000 0.00 0.00 45.45 3.16
2469 2479 4.814234 TCTTTGAAATACACAACGAGCAGT 59.186 37.500 0.00 0.00 0.00 4.40
2470 2480 5.342806 TCTTTGAAATACACAACGAGCAG 57.657 39.130 0.00 0.00 0.00 4.24
2471 2481 5.940192 ATCTTTGAAATACACAACGAGCA 57.060 34.783 0.00 0.00 31.27 4.26
2472 2482 8.175069 TGAATATCTTTGAAATACACAACGAGC 58.825 33.333 0.00 0.00 31.27 5.03
2474 2484 9.820229 GTTGAATATCTTTGAAATACACAACGA 57.180 29.630 0.00 0.00 32.03 3.85
2475 2485 9.605955 TGTTGAATATCTTTGAAATACACAACG 57.394 29.630 0.00 0.00 34.44 4.10
2497 2507 7.589587 ACGTCAACATTGTACAAATACATGTTG 59.410 33.333 29.40 29.40 46.37 3.33
2498 2508 7.644490 ACGTCAACATTGTACAAATACATGTT 58.356 30.769 13.23 14.59 41.02 2.71
2499 2509 7.172532 AGACGTCAACATTGTACAAATACATGT 59.827 33.333 19.50 9.12 41.02 3.21
2500 2510 7.518161 AGACGTCAACATTGTACAAATACATG 58.482 34.615 19.50 8.44 41.02 3.21
2501 2511 7.667043 AGACGTCAACATTGTACAAATACAT 57.333 32.000 19.50 0.00 41.02 2.29
2502 2512 8.766000 ATAGACGTCAACATTGTACAAATACA 57.234 30.769 19.50 0.00 39.63 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.