Multiple sequence alignment - TraesCS3A01G089900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G089900 chr3A 100.000 3439 0 0 1 3439 57278520 57275082 0.000000e+00 6351
1 TraesCS3A01G089900 chr3A 98.429 2737 22 2 724 3439 23447067 23449803 0.000000e+00 4796
2 TraesCS3A01G089900 chr5B 99.300 2716 19 0 724 3439 339081373 339084088 0.000000e+00 4911
3 TraesCS3A01G089900 chr2B 99.229 2722 16 5 718 3439 165276624 165279340 0.000000e+00 4905
4 TraesCS3A01G089900 chr2B 96.406 1864 46 10 1593 3439 178741887 178743746 0.000000e+00 3051
5 TraesCS3A01G089900 chr2B 93.710 620 27 3 2821 3439 36419875 36419267 0.000000e+00 918
6 TraesCS3A01G089900 chr7B 98.969 2717 28 0 723 3439 122624255 122626971 0.000000e+00 4863
7 TraesCS3A01G089900 chr7B 99.343 2437 16 0 724 3160 476795152 476792716 0.000000e+00 4412
8 TraesCS3A01G089900 chr4A 98.535 2731 25 1 724 3439 644772685 644769955 0.000000e+00 4807
9 TraesCS3A01G089900 chr5A 98.464 2735 27 1 720 3439 69232552 69229818 0.000000e+00 4804
10 TraesCS3A01G089900 chr1A 98.070 2746 22 16 724 3439 521287689 521284945 0.000000e+00 4748
11 TraesCS3A01G089900 chr1A 97.813 2744 28 13 727 3439 500074427 500071685 0.000000e+00 4706
12 TraesCS3A01G089900 chr6A 98.202 2392 28 1 724 3100 97398564 97396173 0.000000e+00 4165
13 TraesCS3A01G089900 chr3D 85.537 242 16 11 186 417 45756746 45756514 5.740000e-58 235
14 TraesCS3A01G089900 chr3D 88.811 143 4 4 1 131 45756902 45756760 7.640000e-37 165
15 TraesCS3A01G089900 chr3B 94.737 133 5 2 1 131 71398106 71397974 4.500000e-49 206
16 TraesCS3A01G089900 chr3B 90.845 142 9 2 186 326 71397961 71397823 1.630000e-43 187


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G089900 chr3A 57275082 57278520 3438 True 6351 6351 100.000 1 3439 1 chr3A.!!$R1 3438
1 TraesCS3A01G089900 chr3A 23447067 23449803 2736 False 4796 4796 98.429 724 3439 1 chr3A.!!$F1 2715
2 TraesCS3A01G089900 chr5B 339081373 339084088 2715 False 4911 4911 99.300 724 3439 1 chr5B.!!$F1 2715
3 TraesCS3A01G089900 chr2B 165276624 165279340 2716 False 4905 4905 99.229 718 3439 1 chr2B.!!$F1 2721
4 TraesCS3A01G089900 chr2B 178741887 178743746 1859 False 3051 3051 96.406 1593 3439 1 chr2B.!!$F2 1846
5 TraesCS3A01G089900 chr2B 36419267 36419875 608 True 918 918 93.710 2821 3439 1 chr2B.!!$R1 618
6 TraesCS3A01G089900 chr7B 122624255 122626971 2716 False 4863 4863 98.969 723 3439 1 chr7B.!!$F1 2716
7 TraesCS3A01G089900 chr7B 476792716 476795152 2436 True 4412 4412 99.343 724 3160 1 chr7B.!!$R1 2436
8 TraesCS3A01G089900 chr4A 644769955 644772685 2730 True 4807 4807 98.535 724 3439 1 chr4A.!!$R1 2715
9 TraesCS3A01G089900 chr5A 69229818 69232552 2734 True 4804 4804 98.464 720 3439 1 chr5A.!!$R1 2719
10 TraesCS3A01G089900 chr1A 521284945 521287689 2744 True 4748 4748 98.070 724 3439 1 chr1A.!!$R2 2715
11 TraesCS3A01G089900 chr1A 500071685 500074427 2742 True 4706 4706 97.813 727 3439 1 chr1A.!!$R1 2712
12 TraesCS3A01G089900 chr6A 97396173 97398564 2391 True 4165 4165 98.202 724 3100 1 chr6A.!!$R1 2376

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
563 564 0.034616 CGGAATCAGGGAGGAGATGC 59.965 60.0 0.0 0.0 0.0 3.91 F
569 570 0.179936 CAGGGAGGAGATGCAGAACC 59.820 60.0 0.0 0.0 0.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2288 2309 8.034804 GCTTTTTATTTCCCTTAAGCAGATCAA 58.965 33.333 0.00 0.0 38.23 2.57 R
2847 2943 6.183360 GGCTTAGTTGCAGGCAAGATATTAAA 60.183 38.462 6.99 0.0 36.52 1.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.328277 CCTACGGAAGAAGGATATCAGATAG 57.672 44.000 4.83 0.00 34.58 2.08
25 26 6.320164 CCTACGGAAGAAGGATATCAGATAGG 59.680 46.154 4.83 0.00 34.58 2.57
26 27 5.646215 ACGGAAGAAGGATATCAGATAGGT 58.354 41.667 4.83 0.00 0.00 3.08
27 28 5.712917 ACGGAAGAAGGATATCAGATAGGTC 59.287 44.000 4.83 0.00 0.00 3.85
28 29 5.712446 CGGAAGAAGGATATCAGATAGGTCA 59.288 44.000 4.83 0.00 0.00 4.02
29 30 6.349777 CGGAAGAAGGATATCAGATAGGTCAC 60.350 46.154 4.83 0.00 0.00 3.67
30 31 6.495181 GGAAGAAGGATATCAGATAGGTCACA 59.505 42.308 4.83 0.00 0.00 3.58
31 32 7.180051 GGAAGAAGGATATCAGATAGGTCACAT 59.820 40.741 4.83 0.00 0.00 3.21
32 33 9.249053 GAAGAAGGATATCAGATAGGTCACATA 57.751 37.037 4.83 0.00 0.00 2.29
33 34 8.588290 AGAAGGATATCAGATAGGTCACATAC 57.412 38.462 4.83 0.00 0.00 2.39
34 35 8.397957 AGAAGGATATCAGATAGGTCACATACT 58.602 37.037 4.83 0.00 0.00 2.12
35 36 8.964533 AAGGATATCAGATAGGTCACATACTT 57.035 34.615 4.83 0.00 0.00 2.24
36 37 8.359875 AGGATATCAGATAGGTCACATACTTG 57.640 38.462 4.83 0.00 0.00 3.16
37 38 7.398618 AGGATATCAGATAGGTCACATACTTGG 59.601 40.741 4.83 0.00 0.00 3.61
38 39 7.397476 GGATATCAGATAGGTCACATACTTGGA 59.603 40.741 4.83 0.00 0.00 3.53
39 40 5.854010 TCAGATAGGTCACATACTTGGAC 57.146 43.478 0.00 0.00 0.00 4.02
40 41 5.269189 TCAGATAGGTCACATACTTGGACA 58.731 41.667 0.00 0.00 33.26 4.02
41 42 5.360999 TCAGATAGGTCACATACTTGGACAG 59.639 44.000 0.00 0.00 33.26 3.51
42 43 5.360999 CAGATAGGTCACATACTTGGACAGA 59.639 44.000 0.00 0.00 33.26 3.41
43 44 6.041409 CAGATAGGTCACATACTTGGACAGAT 59.959 42.308 0.00 0.00 33.26 2.90
44 45 4.744795 AGGTCACATACTTGGACAGATC 57.255 45.455 0.00 0.00 33.26 2.75
45 46 3.452627 AGGTCACATACTTGGACAGATCC 59.547 47.826 0.00 0.00 46.48 3.36
56 57 2.646930 GGACAGATCCATCATGCAACA 58.353 47.619 0.00 0.00 45.47 3.33
57 58 3.018856 GGACAGATCCATCATGCAACAA 58.981 45.455 0.00 0.00 45.47 2.83
58 59 3.181493 GGACAGATCCATCATGCAACAAC 60.181 47.826 0.00 0.00 45.47 3.32
59 60 3.423749 ACAGATCCATCATGCAACAACA 58.576 40.909 0.00 0.00 0.00 3.33
60 61 3.827876 ACAGATCCATCATGCAACAACAA 59.172 39.130 0.00 0.00 0.00 2.83
61 62 4.082408 ACAGATCCATCATGCAACAACAAG 60.082 41.667 0.00 0.00 0.00 3.16
62 63 2.728690 TCCATCATGCAACAACAAGC 57.271 45.000 0.00 0.00 0.00 4.01
63 64 1.068402 TCCATCATGCAACAACAAGCG 60.068 47.619 0.00 0.00 0.00 4.68
64 65 1.068402 CCATCATGCAACAACAAGCGA 60.068 47.619 0.00 0.00 0.00 4.93
65 66 2.607526 CCATCATGCAACAACAAGCGAA 60.608 45.455 0.00 0.00 0.00 4.70
66 67 2.859526 TCATGCAACAACAAGCGAAA 57.140 40.000 0.00 0.00 0.00 3.46
67 68 2.458951 TCATGCAACAACAAGCGAAAC 58.541 42.857 0.00 0.00 0.00 2.78
68 69 1.187704 CATGCAACAACAAGCGAAACG 59.812 47.619 0.00 0.00 0.00 3.60
69 70 0.448197 TGCAACAACAAGCGAAACGA 59.552 45.000 0.00 0.00 0.00 3.85
70 71 1.112459 GCAACAACAAGCGAAACGAG 58.888 50.000 0.00 0.00 0.00 4.18
71 72 1.267832 GCAACAACAAGCGAAACGAGA 60.268 47.619 0.00 0.00 0.00 4.04
72 73 2.629022 CAACAACAAGCGAAACGAGAG 58.371 47.619 0.00 0.00 0.00 3.20
73 74 2.218953 ACAACAAGCGAAACGAGAGA 57.781 45.000 0.00 0.00 0.00 3.10
74 75 2.128035 ACAACAAGCGAAACGAGAGAG 58.872 47.619 0.00 0.00 0.00 3.20
75 76 2.223735 ACAACAAGCGAAACGAGAGAGA 60.224 45.455 0.00 0.00 0.00 3.10
76 77 2.339728 ACAAGCGAAACGAGAGAGAG 57.660 50.000 0.00 0.00 0.00 3.20
77 78 1.880675 ACAAGCGAAACGAGAGAGAGA 59.119 47.619 0.00 0.00 0.00 3.10
78 79 2.293677 ACAAGCGAAACGAGAGAGAGAA 59.706 45.455 0.00 0.00 0.00 2.87
79 80 2.622546 AGCGAAACGAGAGAGAGAAC 57.377 50.000 0.00 0.00 0.00 3.01
80 81 1.135916 AGCGAAACGAGAGAGAGAACG 60.136 52.381 0.00 0.00 0.00 3.95
81 82 1.884756 CGAAACGAGAGAGAGAACGG 58.115 55.000 0.00 0.00 0.00 4.44
82 83 1.197264 CGAAACGAGAGAGAGAACGGT 59.803 52.381 0.00 0.00 0.00 4.83
83 84 2.586900 GAAACGAGAGAGAGAACGGTG 58.413 52.381 0.00 0.00 0.00 4.94
84 85 0.241481 AACGAGAGAGAGAACGGTGC 59.759 55.000 0.00 0.00 0.00 5.01
85 86 1.137825 CGAGAGAGAGAACGGTGCC 59.862 63.158 0.00 0.00 0.00 5.01
86 87 1.309499 CGAGAGAGAGAACGGTGCCT 61.309 60.000 0.00 0.00 0.00 4.75
87 88 0.454196 GAGAGAGAGAACGGTGCCTC 59.546 60.000 3.44 3.44 0.00 4.70
88 89 0.968393 AGAGAGAGAACGGTGCCTCC 60.968 60.000 7.05 1.33 0.00 4.30
100 101 4.845811 GCCTCCGGCCTCTATCTA 57.154 61.111 0.00 0.00 44.06 1.98
101 102 3.291497 GCCTCCGGCCTCTATCTAT 57.709 57.895 0.00 0.00 44.06 1.98
102 103 2.438800 GCCTCCGGCCTCTATCTATA 57.561 55.000 0.00 0.00 44.06 1.31
103 104 2.952116 GCCTCCGGCCTCTATCTATAT 58.048 52.381 0.00 0.00 44.06 0.86
104 105 4.101645 GCCTCCGGCCTCTATCTATATA 57.898 50.000 0.00 0.00 44.06 0.86
105 106 4.668636 GCCTCCGGCCTCTATCTATATAT 58.331 47.826 0.00 0.00 44.06 0.86
106 107 4.461081 GCCTCCGGCCTCTATCTATATATG 59.539 50.000 0.00 0.00 44.06 1.78
107 108 4.461081 CCTCCGGCCTCTATCTATATATGC 59.539 50.000 0.00 0.00 0.00 3.14
108 109 5.321102 CTCCGGCCTCTATCTATATATGCT 58.679 45.833 0.00 0.00 0.00 3.79
109 110 5.073428 TCCGGCCTCTATCTATATATGCTG 58.927 45.833 0.00 0.00 0.00 4.41
110 111 4.321601 CCGGCCTCTATCTATATATGCTGC 60.322 50.000 0.00 0.00 0.00 5.25
111 112 4.522405 CGGCCTCTATCTATATATGCTGCT 59.478 45.833 0.00 0.00 0.00 4.24
112 113 5.335583 CGGCCTCTATCTATATATGCTGCTC 60.336 48.000 0.00 0.00 0.00 4.26
113 114 5.047377 GGCCTCTATCTATATATGCTGCTCC 60.047 48.000 0.00 0.00 0.00 4.70
114 115 5.047377 GCCTCTATCTATATATGCTGCTCCC 60.047 48.000 0.00 0.00 0.00 4.30
115 116 5.182950 CCTCTATCTATATATGCTGCTCCCG 59.817 48.000 0.00 0.00 0.00 5.14
116 117 5.696030 TCTATCTATATATGCTGCTCCCGT 58.304 41.667 0.00 0.00 0.00 5.28
117 118 6.129874 TCTATCTATATATGCTGCTCCCGTT 58.870 40.000 0.00 0.00 0.00 4.44
118 119 4.456280 TCTATATATGCTGCTCCCGTTG 57.544 45.455 0.00 0.00 0.00 4.10
119 120 2.479566 ATATATGCTGCTCCCGTTGG 57.520 50.000 0.00 0.00 0.00 3.77
120 121 1.128200 TATATGCTGCTCCCGTTGGT 58.872 50.000 0.00 0.00 0.00 3.67
121 122 0.464373 ATATGCTGCTCCCGTTGGTG 60.464 55.000 0.00 0.00 0.00 4.17
122 123 1.836999 TATGCTGCTCCCGTTGGTGT 61.837 55.000 0.00 0.00 0.00 4.16
123 124 3.357079 GCTGCTCCCGTTGGTGTG 61.357 66.667 0.00 0.00 0.00 3.82
124 125 2.425592 CTGCTCCCGTTGGTGTGA 59.574 61.111 0.00 0.00 0.00 3.58
125 126 1.227823 CTGCTCCCGTTGGTGTGAA 60.228 57.895 0.00 0.00 0.00 3.18
126 127 1.507141 CTGCTCCCGTTGGTGTGAAC 61.507 60.000 0.00 0.00 0.00 3.18
127 128 1.525077 GCTCCCGTTGGTGTGAACA 60.525 57.895 0.00 0.00 0.00 3.18
128 129 1.098712 GCTCCCGTTGGTGTGAACAA 61.099 55.000 0.00 0.00 0.00 2.83
129 130 1.384525 CTCCCGTTGGTGTGAACAAA 58.615 50.000 0.00 0.00 0.00 2.83
130 131 1.953686 CTCCCGTTGGTGTGAACAAAT 59.046 47.619 0.00 0.00 0.00 2.32
131 132 3.142951 CTCCCGTTGGTGTGAACAAATA 58.857 45.455 0.00 0.00 0.00 1.40
132 133 3.756434 CTCCCGTTGGTGTGAACAAATAT 59.244 43.478 0.00 0.00 0.00 1.28
133 134 3.504134 TCCCGTTGGTGTGAACAAATATG 59.496 43.478 0.00 0.00 0.00 1.78
134 135 3.241701 CCGTTGGTGTGAACAAATATGC 58.758 45.455 0.00 0.00 0.00 3.14
135 136 2.908009 CGTTGGTGTGAACAAATATGCG 59.092 45.455 0.00 0.00 0.00 4.73
136 137 3.608241 CGTTGGTGTGAACAAATATGCGT 60.608 43.478 0.00 0.00 0.00 5.24
137 138 3.550950 TGGTGTGAACAAATATGCGTG 57.449 42.857 0.00 0.00 0.00 5.34
138 139 2.881513 TGGTGTGAACAAATATGCGTGT 59.118 40.909 0.00 0.00 0.00 4.49
139 140 3.233578 GGTGTGAACAAATATGCGTGTG 58.766 45.455 0.00 0.00 0.00 3.82
140 141 3.304391 GGTGTGAACAAATATGCGTGTGT 60.304 43.478 0.00 0.00 0.00 3.72
141 142 4.083749 GGTGTGAACAAATATGCGTGTGTA 60.084 41.667 0.00 0.00 0.00 2.90
142 143 4.843984 GTGTGAACAAATATGCGTGTGTAC 59.156 41.667 0.00 0.00 0.00 2.90
143 144 4.083749 TGTGAACAAATATGCGTGTGTACC 60.084 41.667 0.00 0.00 0.00 3.34
144 145 3.123790 TGAACAAATATGCGTGTGTACCG 59.876 43.478 0.00 0.00 0.00 4.02
145 146 2.004017 ACAAATATGCGTGTGTACCGG 58.996 47.619 0.00 0.00 0.00 5.28
146 147 2.004017 CAAATATGCGTGTGTACCGGT 58.996 47.619 13.98 13.98 0.00 5.28
147 148 3.188492 CAAATATGCGTGTGTACCGGTA 58.812 45.455 11.16 11.16 0.00 4.02
148 149 2.787601 ATATGCGTGTGTACCGGTAG 57.212 50.000 16.41 3.74 0.00 3.18
149 150 1.748950 TATGCGTGTGTACCGGTAGA 58.251 50.000 16.41 11.85 0.00 2.59
150 151 1.108776 ATGCGTGTGTACCGGTAGAT 58.891 50.000 16.41 0.00 0.00 1.98
151 152 0.452987 TGCGTGTGTACCGGTAGATC 59.547 55.000 16.41 10.36 0.00 2.75
152 153 0.452987 GCGTGTGTACCGGTAGATCA 59.547 55.000 16.41 11.83 0.00 2.92
153 154 1.796617 GCGTGTGTACCGGTAGATCAC 60.797 57.143 16.41 19.42 0.00 3.06
154 155 1.469703 CGTGTGTACCGGTAGATCACA 59.530 52.381 24.85 24.85 36.81 3.58
156 157 1.820519 TGTGTACCGGTAGATCACACC 59.179 52.381 26.79 14.26 38.95 4.16
157 158 1.820519 GTGTACCGGTAGATCACACCA 59.179 52.381 21.82 9.29 35.67 4.17
158 159 2.231964 GTGTACCGGTAGATCACACCAA 59.768 50.000 21.82 0.00 35.67 3.67
159 160 2.494471 TGTACCGGTAGATCACACCAAG 59.506 50.000 16.41 8.84 35.67 3.61
160 161 1.933021 ACCGGTAGATCACACCAAGA 58.067 50.000 4.49 0.00 35.67 3.02
161 162 1.825474 ACCGGTAGATCACACCAAGAG 59.175 52.381 4.49 4.95 35.67 2.85
162 163 1.471676 CCGGTAGATCACACCAAGAGC 60.472 57.143 14.77 0.00 35.67 4.09
163 164 1.471676 CGGTAGATCACACCAAGAGCC 60.472 57.143 14.77 0.00 35.67 4.70
164 165 1.471676 GGTAGATCACACCAAGAGCCG 60.472 57.143 10.76 0.00 36.01 5.52
165 166 1.204941 GTAGATCACACCAAGAGCCGT 59.795 52.381 0.00 0.00 0.00 5.68
166 167 0.687354 AGATCACACCAAGAGCCGTT 59.313 50.000 0.00 0.00 0.00 4.44
167 168 1.072331 AGATCACACCAAGAGCCGTTT 59.928 47.619 0.00 0.00 0.00 3.60
168 169 1.464997 GATCACACCAAGAGCCGTTTC 59.535 52.381 0.00 0.00 0.00 2.78
169 170 0.179234 TCACACCAAGAGCCGTTTCA 59.821 50.000 0.00 0.00 0.00 2.69
170 171 1.021202 CACACCAAGAGCCGTTTCAA 58.979 50.000 0.00 0.00 0.00 2.69
171 172 1.403679 CACACCAAGAGCCGTTTCAAA 59.596 47.619 0.00 0.00 0.00 2.69
172 173 2.096248 ACACCAAGAGCCGTTTCAAAA 58.904 42.857 0.00 0.00 0.00 2.44
173 174 2.494073 ACACCAAGAGCCGTTTCAAAAA 59.506 40.909 0.00 0.00 0.00 1.94
203 204 9.823647 AAAATATCACACCAAGAGACATACTAG 57.176 33.333 0.00 0.00 0.00 2.57
204 205 4.720649 TCACACCAAGAGACATACTAGC 57.279 45.455 0.00 0.00 0.00 3.42
205 206 4.086457 TCACACCAAGAGACATACTAGCA 58.914 43.478 0.00 0.00 0.00 3.49
206 207 4.158579 TCACACCAAGAGACATACTAGCAG 59.841 45.833 0.00 0.00 0.00 4.24
207 208 3.118956 ACACCAAGAGACATACTAGCAGC 60.119 47.826 0.00 0.00 0.00 5.25
208 209 3.131933 CACCAAGAGACATACTAGCAGCT 59.868 47.826 0.00 0.00 0.00 4.24
209 210 4.339530 CACCAAGAGACATACTAGCAGCTA 59.660 45.833 1.13 1.13 0.00 3.32
210 211 4.582656 ACCAAGAGACATACTAGCAGCTAG 59.417 45.833 25.51 25.51 39.72 3.42
222 223 5.112686 ACTAGCAGCTAGTAATCAAAGTGC 58.887 41.667 30.33 0.00 44.35 4.40
223 224 2.932614 AGCAGCTAGTAATCAAAGTGCG 59.067 45.455 0.00 0.00 34.84 5.34
224 225 2.537730 GCAGCTAGTAATCAAAGTGCGC 60.538 50.000 0.00 0.00 0.00 6.09
225 226 2.030946 CAGCTAGTAATCAAAGTGCGCC 59.969 50.000 4.18 0.00 0.00 6.53
226 227 1.330829 GCTAGTAATCAAAGTGCGCCC 59.669 52.381 4.18 0.00 0.00 6.13
227 228 1.940613 CTAGTAATCAAAGTGCGCCCC 59.059 52.381 4.18 0.00 0.00 5.80
228 229 0.328258 AGTAATCAAAGTGCGCCCCT 59.672 50.000 4.18 0.00 0.00 4.79
229 230 1.173913 GTAATCAAAGTGCGCCCCTT 58.826 50.000 4.18 3.94 0.00 3.95
230 231 1.135402 GTAATCAAAGTGCGCCCCTTG 60.135 52.381 4.18 0.00 0.00 3.61
231 232 0.539438 AATCAAAGTGCGCCCCTTGA 60.539 50.000 6.37 6.37 0.00 3.02
232 233 0.323725 ATCAAAGTGCGCCCCTTGAT 60.324 50.000 10.45 10.45 0.00 2.57
233 234 1.213537 CAAAGTGCGCCCCTTGATG 59.786 57.895 4.18 0.00 0.00 3.07
234 235 1.228552 AAAGTGCGCCCCTTGATGT 60.229 52.632 4.18 0.00 0.00 3.06
235 236 0.827507 AAAGTGCGCCCCTTGATGTT 60.828 50.000 4.18 0.00 0.00 2.71
236 237 1.244019 AAGTGCGCCCCTTGATGTTC 61.244 55.000 4.18 0.00 0.00 3.18
237 238 2.361104 TGCGCCCCTTGATGTTCC 60.361 61.111 4.18 0.00 0.00 3.62
238 239 2.361104 GCGCCCCTTGATGTTCCA 60.361 61.111 0.00 0.00 0.00 3.53
239 240 2.700773 GCGCCCCTTGATGTTCCAC 61.701 63.158 0.00 0.00 0.00 4.02
240 241 1.002134 CGCCCCTTGATGTTCCACT 60.002 57.895 0.00 0.00 0.00 4.00
241 242 1.308069 CGCCCCTTGATGTTCCACTG 61.308 60.000 0.00 0.00 0.00 3.66
242 243 0.967380 GCCCCTTGATGTTCCACTGG 60.967 60.000 0.00 0.00 0.00 4.00
243 244 0.323725 CCCCTTGATGTTCCACTGGG 60.324 60.000 0.00 0.00 32.84 4.45
244 245 0.698238 CCCTTGATGTTCCACTGGGA 59.302 55.000 0.00 0.00 43.03 4.37
245 246 1.340405 CCCTTGATGTTCCACTGGGAG 60.340 57.143 0.00 0.00 46.01 4.30
246 247 1.630369 CCTTGATGTTCCACTGGGAGA 59.370 52.381 0.00 0.00 46.01 3.71
247 248 2.240667 CCTTGATGTTCCACTGGGAGAT 59.759 50.000 0.00 0.00 46.01 2.75
248 249 3.308688 CCTTGATGTTCCACTGGGAGATT 60.309 47.826 0.00 0.00 46.01 2.40
249 250 4.338879 CTTGATGTTCCACTGGGAGATTT 58.661 43.478 0.00 0.00 46.01 2.17
250 251 3.689347 TGATGTTCCACTGGGAGATTTG 58.311 45.455 0.00 0.00 46.01 2.32
251 252 3.074390 TGATGTTCCACTGGGAGATTTGT 59.926 43.478 0.00 0.00 46.01 2.83
252 253 2.862541 TGTTCCACTGGGAGATTTGTG 58.137 47.619 0.00 0.00 46.01 3.33
253 254 2.441375 TGTTCCACTGGGAGATTTGTGA 59.559 45.455 0.00 0.00 46.01 3.58
254 255 3.077359 GTTCCACTGGGAGATTTGTGAG 58.923 50.000 0.00 0.00 46.01 3.51
255 256 1.003580 TCCACTGGGAGATTTGTGAGC 59.996 52.381 0.00 0.00 38.64 4.26
256 257 1.271543 CCACTGGGAGATTTGTGAGCA 60.272 52.381 0.00 0.00 35.59 4.26
257 258 2.082231 CACTGGGAGATTTGTGAGCAG 58.918 52.381 0.00 0.00 32.72 4.24
258 259 1.701847 ACTGGGAGATTTGTGAGCAGT 59.298 47.619 0.00 0.00 0.00 4.40
259 260 2.107204 ACTGGGAGATTTGTGAGCAGTT 59.893 45.455 0.00 0.00 0.00 3.16
260 261 3.327757 ACTGGGAGATTTGTGAGCAGTTA 59.672 43.478 0.00 0.00 0.00 2.24
261 262 4.202461 ACTGGGAGATTTGTGAGCAGTTAA 60.202 41.667 0.00 0.00 0.00 2.01
262 263 4.922206 TGGGAGATTTGTGAGCAGTTAAT 58.078 39.130 0.00 0.00 0.00 1.40
263 264 5.324409 TGGGAGATTTGTGAGCAGTTAATT 58.676 37.500 0.00 0.00 0.00 1.40
264 265 5.774690 TGGGAGATTTGTGAGCAGTTAATTT 59.225 36.000 0.00 0.00 0.00 1.82
265 266 6.267471 TGGGAGATTTGTGAGCAGTTAATTTT 59.733 34.615 0.00 0.00 0.00 1.82
266 267 6.587608 GGGAGATTTGTGAGCAGTTAATTTTG 59.412 38.462 0.00 0.00 0.00 2.44
267 268 7.147976 GGAGATTTGTGAGCAGTTAATTTTGT 58.852 34.615 0.00 0.00 0.00 2.83
268 269 7.653311 GGAGATTTGTGAGCAGTTAATTTTGTT 59.347 33.333 0.00 0.00 0.00 2.83
269 270 8.356533 AGATTTGTGAGCAGTTAATTTTGTTG 57.643 30.769 0.00 0.00 0.00 3.33
270 271 5.964887 TTGTGAGCAGTTAATTTTGTTGC 57.035 34.783 0.00 0.00 35.09 4.17
271 272 4.041049 TGTGAGCAGTTAATTTTGTTGCG 58.959 39.130 0.00 0.00 39.63 4.85
272 273 4.201960 TGTGAGCAGTTAATTTTGTTGCGA 60.202 37.500 0.00 0.00 39.63 5.10
273 274 4.379793 GTGAGCAGTTAATTTTGTTGCGAG 59.620 41.667 0.00 0.00 39.63 5.03
274 275 4.036262 TGAGCAGTTAATTTTGTTGCGAGT 59.964 37.500 0.00 0.00 39.63 4.18
275 276 4.290155 AGCAGTTAATTTTGTTGCGAGTG 58.710 39.130 0.00 0.00 39.63 3.51
276 277 3.121362 GCAGTTAATTTTGTTGCGAGTGC 60.121 43.478 0.00 0.00 43.20 4.40
277 278 4.290155 CAGTTAATTTTGTTGCGAGTGCT 58.710 39.130 0.00 0.00 43.34 4.40
278 279 4.379793 CAGTTAATTTTGTTGCGAGTGCTC 59.620 41.667 0.00 0.00 43.34 4.26
287 288 2.998667 CGAGTGCTCGCGGAAATC 59.001 61.111 6.13 0.00 46.50 2.17
288 289 1.805539 CGAGTGCTCGCGGAAATCA 60.806 57.895 6.13 0.00 46.50 2.57
289 290 1.351430 CGAGTGCTCGCGGAAATCAA 61.351 55.000 6.13 0.00 46.50 2.57
290 291 0.796312 GAGTGCTCGCGGAAATCAAA 59.204 50.000 6.13 0.00 0.00 2.69
291 292 1.196808 GAGTGCTCGCGGAAATCAAAA 59.803 47.619 6.13 0.00 0.00 2.44
292 293 1.197721 AGTGCTCGCGGAAATCAAAAG 59.802 47.619 6.13 0.00 0.00 2.27
293 294 1.196808 GTGCTCGCGGAAATCAAAAGA 59.803 47.619 6.13 0.00 0.00 2.52
294 295 1.196808 TGCTCGCGGAAATCAAAAGAC 59.803 47.619 6.13 0.00 0.00 3.01
295 296 1.196808 GCTCGCGGAAATCAAAAGACA 59.803 47.619 6.13 0.00 0.00 3.41
296 297 2.726066 GCTCGCGGAAATCAAAAGACAG 60.726 50.000 6.13 0.00 0.00 3.51
297 298 2.736721 CTCGCGGAAATCAAAAGACAGA 59.263 45.455 6.13 0.00 0.00 3.41
298 299 2.478894 TCGCGGAAATCAAAAGACAGAC 59.521 45.455 6.13 0.00 0.00 3.51
299 300 2.721797 CGCGGAAATCAAAAGACAGACG 60.722 50.000 0.00 0.00 0.00 4.18
300 301 2.412847 GCGGAAATCAAAAGACAGACGG 60.413 50.000 0.00 0.00 0.00 4.79
301 302 3.064207 CGGAAATCAAAAGACAGACGGA 58.936 45.455 0.00 0.00 0.00 4.69
302 303 3.120649 CGGAAATCAAAAGACAGACGGAC 60.121 47.826 0.00 0.00 0.00 4.79
303 304 3.813166 GGAAATCAAAAGACAGACGGACA 59.187 43.478 0.00 0.00 0.00 4.02
304 305 4.455877 GGAAATCAAAAGACAGACGGACAT 59.544 41.667 0.00 0.00 0.00 3.06
305 306 5.390991 GGAAATCAAAAGACAGACGGACATC 60.391 44.000 0.00 0.00 0.00 3.06
306 307 3.744238 TCAAAAGACAGACGGACATCA 57.256 42.857 0.00 0.00 0.00 3.07
307 308 3.653344 TCAAAAGACAGACGGACATCAG 58.347 45.455 0.00 0.00 0.00 2.90
308 309 2.738846 CAAAAGACAGACGGACATCAGG 59.261 50.000 0.00 0.00 0.00 3.86
309 310 0.247736 AAGACAGACGGACATCAGGC 59.752 55.000 0.00 0.00 0.00 4.85
310 311 0.613292 AGACAGACGGACATCAGGCT 60.613 55.000 0.00 0.00 0.00 4.58
311 312 0.247736 GACAGACGGACATCAGGCTT 59.752 55.000 0.00 0.00 0.00 4.35
312 313 0.247736 ACAGACGGACATCAGGCTTC 59.752 55.000 0.00 0.00 0.00 3.86
313 314 0.534412 CAGACGGACATCAGGCTTCT 59.466 55.000 0.00 0.00 0.00 2.85
314 315 0.820871 AGACGGACATCAGGCTTCTC 59.179 55.000 0.00 0.00 0.00 2.87
315 316 0.532573 GACGGACATCAGGCTTCTCA 59.467 55.000 0.00 0.00 0.00 3.27
316 317 0.534412 ACGGACATCAGGCTTCTCAG 59.466 55.000 0.00 0.00 0.00 3.35
317 318 0.820226 CGGACATCAGGCTTCTCAGA 59.180 55.000 0.00 0.00 0.00 3.27
318 319 1.411977 CGGACATCAGGCTTCTCAGAT 59.588 52.381 0.00 0.00 0.00 2.90
319 320 2.158986 CGGACATCAGGCTTCTCAGATT 60.159 50.000 0.00 0.00 0.00 2.40
320 321 3.681034 CGGACATCAGGCTTCTCAGATTT 60.681 47.826 0.00 0.00 0.00 2.17
321 322 3.876320 GGACATCAGGCTTCTCAGATTTC 59.124 47.826 0.00 0.00 0.00 2.17
322 323 3.876320 GACATCAGGCTTCTCAGATTTCC 59.124 47.826 0.00 0.00 0.00 3.13
323 324 3.212685 CATCAGGCTTCTCAGATTTCCC 58.787 50.000 0.00 0.00 0.00 3.97
324 325 2.555664 TCAGGCTTCTCAGATTTCCCT 58.444 47.619 0.00 0.00 0.00 4.20
325 326 2.503356 TCAGGCTTCTCAGATTTCCCTC 59.497 50.000 0.00 0.00 0.00 4.30
326 327 2.504996 CAGGCTTCTCAGATTTCCCTCT 59.495 50.000 0.00 0.00 0.00 3.69
327 328 2.504996 AGGCTTCTCAGATTTCCCTCTG 59.495 50.000 0.00 0.00 43.33 3.35
328 329 2.287769 GCTTCTCAGATTTCCCTCTGC 58.712 52.381 0.00 0.00 42.00 4.26
329 330 2.355513 GCTTCTCAGATTTCCCTCTGCA 60.356 50.000 0.00 0.00 42.00 4.41
330 331 3.269178 CTTCTCAGATTTCCCTCTGCAC 58.731 50.000 0.00 0.00 42.00 4.57
331 332 2.544721 TCTCAGATTTCCCTCTGCACT 58.455 47.619 0.00 0.00 42.00 4.40
332 333 3.713003 TCTCAGATTTCCCTCTGCACTA 58.287 45.455 0.00 0.00 42.00 2.74
333 334 4.096681 TCTCAGATTTCCCTCTGCACTAA 58.903 43.478 0.00 0.00 42.00 2.24
334 335 4.532126 TCTCAGATTTCCCTCTGCACTAAA 59.468 41.667 0.00 0.00 42.00 1.85
335 336 4.836825 TCAGATTTCCCTCTGCACTAAAG 58.163 43.478 0.00 0.00 42.00 1.85
336 337 3.376546 CAGATTTCCCTCTGCACTAAAGC 59.623 47.826 0.00 0.00 36.53 3.51
337 338 2.200373 TTTCCCTCTGCACTAAAGCC 57.800 50.000 0.00 0.00 0.00 4.35
338 339 1.362224 TTCCCTCTGCACTAAAGCCT 58.638 50.000 0.00 0.00 0.00 4.58
339 340 2.247699 TCCCTCTGCACTAAAGCCTA 57.752 50.000 0.00 0.00 0.00 3.93
340 341 2.111384 TCCCTCTGCACTAAAGCCTAG 58.889 52.381 0.00 0.00 0.00 3.02
341 342 2.111384 CCCTCTGCACTAAAGCCTAGA 58.889 52.381 0.00 0.00 0.00 2.43
342 343 2.102252 CCCTCTGCACTAAAGCCTAGAG 59.898 54.545 0.00 0.00 35.54 2.43
343 344 2.102252 CCTCTGCACTAAAGCCTAGAGG 59.898 54.545 0.00 0.00 43.82 3.69
353 354 4.554036 CCTAGAGGCGGGCTTGGC 62.554 72.222 5.24 0.00 0.00 4.52
354 355 3.785859 CTAGAGGCGGGCTTGGCA 61.786 66.667 5.24 0.00 36.77 4.92
355 356 3.326578 TAGAGGCGGGCTTGGCAA 61.327 61.111 5.24 0.00 36.77 4.52
356 357 3.622060 TAGAGGCGGGCTTGGCAAC 62.622 63.158 5.24 0.00 36.77 4.17
366 367 2.443577 TTGGCAACCCAAGCAGCA 60.444 55.556 0.00 0.00 46.01 4.41
367 368 2.500714 TTGGCAACCCAAGCAGCAG 61.501 57.895 0.00 0.00 46.01 4.24
368 369 4.368543 GGCAACCCAAGCAGCAGC 62.369 66.667 0.00 0.00 42.56 5.25
369 370 4.368543 GCAACCCAAGCAGCAGCC 62.369 66.667 0.00 0.00 43.56 4.85
370 371 4.047059 CAACCCAAGCAGCAGCCG 62.047 66.667 0.00 0.00 43.56 5.52
383 384 0.040067 GCAGCCGGCATTAGTATTGC 60.040 55.000 31.54 22.82 43.97 3.56
384 385 1.308047 CAGCCGGCATTAGTATTGCA 58.692 50.000 31.54 0.00 41.95 4.08
385 386 1.675483 CAGCCGGCATTAGTATTGCAA 59.325 47.619 31.54 0.00 41.95 4.08
386 387 2.098934 CAGCCGGCATTAGTATTGCAAA 59.901 45.455 31.54 0.00 41.95 3.68
387 388 2.757868 AGCCGGCATTAGTATTGCAAAA 59.242 40.909 31.54 0.00 41.95 2.44
388 389 3.194542 AGCCGGCATTAGTATTGCAAAAA 59.805 39.130 31.54 0.00 41.95 1.94
408 409 6.556974 AAAAATGGTAGTACTACTCCCCTC 57.443 41.667 27.71 13.63 36.36 4.30
409 410 5.484734 AAATGGTAGTACTACTCCCCTCT 57.515 43.478 27.71 7.94 36.36 3.69
410 411 3.947612 TGGTAGTACTACTCCCCTCTG 57.052 52.381 27.71 0.00 36.36 3.35
411 412 2.091994 TGGTAGTACTACTCCCCTCTGC 60.092 54.545 27.71 11.77 36.36 4.26
412 413 2.585330 GTAGTACTACTCCCCTCTGCC 58.415 57.143 23.17 0.00 33.45 4.85
413 414 0.262285 AGTACTACTCCCCTCTGCCC 59.738 60.000 0.00 0.00 0.00 5.36
414 415 0.262285 GTACTACTCCCCTCTGCCCT 59.738 60.000 0.00 0.00 0.00 5.19
415 416 0.556747 TACTACTCCCCTCTGCCCTC 59.443 60.000 0.00 0.00 0.00 4.30
416 417 1.458588 CTACTCCCCTCTGCCCTCC 60.459 68.421 0.00 0.00 0.00 4.30
417 418 3.375443 TACTCCCCTCTGCCCTCCG 62.375 68.421 0.00 0.00 0.00 4.63
429 430 3.849064 CCTCCGGGAGCAGAGTAG 58.151 66.667 18.91 0.00 33.58 2.57
430 431 1.227664 CCTCCGGGAGCAGAGTAGA 59.772 63.158 18.91 0.00 33.58 2.59
431 432 0.821711 CCTCCGGGAGCAGAGTAGAG 60.822 65.000 18.91 0.00 33.58 2.43
432 433 0.821711 CTCCGGGAGCAGAGTAGAGG 60.822 65.000 11.83 0.00 0.00 3.69
433 434 1.227664 CCGGGAGCAGAGTAGAGGA 59.772 63.158 0.00 0.00 0.00 3.71
434 435 0.821711 CCGGGAGCAGAGTAGAGGAG 60.822 65.000 0.00 0.00 0.00 3.69
435 436 0.821711 CGGGAGCAGAGTAGAGGAGG 60.822 65.000 0.00 0.00 0.00 4.30
436 437 0.469144 GGGAGCAGAGTAGAGGAGGG 60.469 65.000 0.00 0.00 0.00 4.30
437 438 1.112916 GGAGCAGAGTAGAGGAGGGC 61.113 65.000 0.00 0.00 0.00 5.19
438 439 1.075600 AGCAGAGTAGAGGAGGGCC 60.076 63.158 0.00 0.00 0.00 5.80
439 440 2.137528 GCAGAGTAGAGGAGGGCCC 61.138 68.421 16.46 16.46 33.31 5.80
440 441 1.458588 CAGAGTAGAGGAGGGCCCC 60.459 68.421 21.43 10.33 34.66 5.80
441 442 1.627460 AGAGTAGAGGAGGGCCCCT 60.627 63.158 21.43 9.79 39.77 4.79
460 461 3.072468 CCCGTCGGCCCTCTGTAA 61.072 66.667 5.50 0.00 0.00 2.41
461 462 2.494918 CCGTCGGCCCTCTGTAAG 59.505 66.667 0.00 0.00 0.00 2.34
462 463 2.202756 CGTCGGCCCTCTGTAAGC 60.203 66.667 0.00 0.00 0.00 3.09
463 464 2.187163 GTCGGCCCTCTGTAAGCC 59.813 66.667 0.00 0.00 43.53 4.35
466 467 4.858680 GGCCCTCTGTAAGCCGGC 62.859 72.222 21.89 21.89 44.29 6.13
467 468 4.858680 GCCCTCTGTAAGCCGGCC 62.859 72.222 26.15 8.84 40.65 6.13
468 469 4.530857 CCCTCTGTAAGCCGGCCG 62.531 72.222 26.15 21.04 0.00 6.13
470 471 4.451150 CTCTGTAAGCCGGCCGCA 62.451 66.667 26.15 18.49 41.38 5.69
471 472 4.451150 TCTGTAAGCCGGCCGCAG 62.451 66.667 26.15 26.54 41.38 5.18
488 489 4.511246 GCAGCCATGGCCTGCCTA 62.511 66.667 33.38 0.00 43.17 3.93
489 490 2.519441 CAGCCATGGCCTGCCTAT 59.481 61.111 33.14 10.12 43.17 2.57
490 491 1.602888 CAGCCATGGCCTGCCTATC 60.603 63.158 33.14 2.26 43.17 2.08
491 492 1.773391 AGCCATGGCCTGCCTATCT 60.773 57.895 33.14 8.45 43.17 1.98
492 493 0.474466 AGCCATGGCCTGCCTATCTA 60.474 55.000 33.14 0.00 43.17 1.98
493 494 0.622665 GCCATGGCCTGCCTATCTAT 59.377 55.000 27.24 0.00 36.94 1.98
494 495 1.681166 GCCATGGCCTGCCTATCTATG 60.681 57.143 27.24 4.24 36.94 2.23
495 496 1.681166 CCATGGCCTGCCTATCTATGC 60.681 57.143 9.97 0.00 36.94 3.14
496 497 1.281287 CATGGCCTGCCTATCTATGCT 59.719 52.381 9.97 0.00 36.94 3.79
497 498 0.689055 TGGCCTGCCTATCTATGCTG 59.311 55.000 9.97 0.00 36.94 4.41
498 499 0.035630 GGCCTGCCTATCTATGCTGG 60.036 60.000 0.00 0.00 46.06 4.85
499 500 0.689623 GCCTGCCTATCTATGCTGGT 59.310 55.000 8.80 0.00 45.35 4.00
500 501 1.610102 GCCTGCCTATCTATGCTGGTG 60.610 57.143 8.80 0.00 45.35 4.17
501 502 1.973515 CCTGCCTATCTATGCTGGTGA 59.026 52.381 0.00 0.00 40.52 4.02
502 503 2.289320 CCTGCCTATCTATGCTGGTGAC 60.289 54.545 0.00 0.00 40.52 3.67
503 504 2.366590 CTGCCTATCTATGCTGGTGACA 59.633 50.000 0.00 0.00 39.59 3.58
513 514 2.970639 TGGTGACAGGACGCTAGC 59.029 61.111 4.06 4.06 35.01 3.42
514 515 1.606601 TGGTGACAGGACGCTAGCT 60.607 57.895 13.93 0.00 35.01 3.32
515 516 0.323087 TGGTGACAGGACGCTAGCTA 60.323 55.000 13.93 0.00 35.01 3.32
516 517 0.382515 GGTGACAGGACGCTAGCTAG 59.617 60.000 16.84 16.84 0.00 3.42
517 518 0.248702 GTGACAGGACGCTAGCTAGC 60.249 60.000 31.88 31.88 45.62 3.42
526 527 4.951963 CTAGCTAGCGTGCGGGCC 62.952 72.222 8.05 0.00 38.13 5.80
551 552 4.812476 CAGCGCCGGACGGAATCA 62.812 66.667 15.99 0.00 43.93 2.57
552 553 4.514577 AGCGCCGGACGGAATCAG 62.515 66.667 15.99 0.95 43.93 2.90
554 555 4.891727 CGCCGGACGGAATCAGGG 62.892 72.222 15.99 0.00 42.63 4.45
555 556 3.467226 GCCGGACGGAATCAGGGA 61.467 66.667 15.99 0.00 42.63 4.20
556 557 2.815308 CCGGACGGAATCAGGGAG 59.185 66.667 4.40 0.00 38.92 4.30
557 558 2.797278 CCGGACGGAATCAGGGAGG 61.797 68.421 4.40 0.00 38.92 4.30
558 559 1.756950 CGGACGGAATCAGGGAGGA 60.757 63.158 0.00 0.00 0.00 3.71
559 560 1.739338 CGGACGGAATCAGGGAGGAG 61.739 65.000 0.00 0.00 0.00 3.69
560 561 0.397254 GGACGGAATCAGGGAGGAGA 60.397 60.000 0.00 0.00 0.00 3.71
561 562 1.710816 GACGGAATCAGGGAGGAGAT 58.289 55.000 0.00 0.00 0.00 2.75
562 563 1.342819 GACGGAATCAGGGAGGAGATG 59.657 57.143 0.00 0.00 0.00 2.90
563 564 0.034616 CGGAATCAGGGAGGAGATGC 59.965 60.000 0.00 0.00 0.00 3.91
564 565 1.135094 GGAATCAGGGAGGAGATGCA 58.865 55.000 0.00 0.00 0.00 3.96
565 566 1.072015 GGAATCAGGGAGGAGATGCAG 59.928 57.143 0.00 0.00 0.00 4.41
566 567 2.045524 GAATCAGGGAGGAGATGCAGA 58.954 52.381 0.00 0.00 0.00 4.26
567 568 2.187239 ATCAGGGAGGAGATGCAGAA 57.813 50.000 0.00 0.00 0.00 3.02
568 569 1.198713 TCAGGGAGGAGATGCAGAAC 58.801 55.000 0.00 0.00 0.00 3.01
569 570 0.179936 CAGGGAGGAGATGCAGAACC 59.820 60.000 0.00 0.00 0.00 3.62
570 571 1.144936 GGGAGGAGATGCAGAACCG 59.855 63.158 0.00 0.00 0.00 4.44
571 572 1.330655 GGGAGGAGATGCAGAACCGA 61.331 60.000 0.00 0.00 0.00 4.69
572 573 0.537188 GGAGGAGATGCAGAACCGAA 59.463 55.000 0.00 0.00 0.00 4.30
573 574 1.646189 GAGGAGATGCAGAACCGAAC 58.354 55.000 0.00 0.00 0.00 3.95
574 575 0.250513 AGGAGATGCAGAACCGAACC 59.749 55.000 0.00 0.00 0.00 3.62
575 576 0.250513 GGAGATGCAGAACCGAACCT 59.749 55.000 0.00 0.00 0.00 3.50
576 577 1.363744 GAGATGCAGAACCGAACCTG 58.636 55.000 0.00 0.00 0.00 4.00
577 578 0.687354 AGATGCAGAACCGAACCTGT 59.313 50.000 0.00 0.00 33.19 4.00
578 579 1.072331 AGATGCAGAACCGAACCTGTT 59.928 47.619 0.00 0.00 33.19 3.16
579 580 1.464997 GATGCAGAACCGAACCTGTTC 59.535 52.381 0.00 0.00 41.89 3.18
587 588 3.119096 GAACCTGTTCGCCGGCTC 61.119 66.667 26.68 15.11 0.00 4.70
588 589 4.699522 AACCTGTTCGCCGGCTCC 62.700 66.667 26.68 12.43 0.00 4.70
650 651 4.899239 CCGCGCTAGGCAGGAAGG 62.899 72.222 5.56 0.00 43.84 3.46
651 652 3.838271 CGCGCTAGGCAGGAAGGA 61.838 66.667 5.56 0.00 43.84 3.36
652 653 2.107953 GCGCTAGGCAGGAAGGAG 59.892 66.667 0.00 0.00 42.87 3.69
653 654 2.818132 CGCTAGGCAGGAAGGAGG 59.182 66.667 0.00 0.00 0.00 4.30
654 655 1.758514 CGCTAGGCAGGAAGGAGGA 60.759 63.158 0.00 0.00 0.00 3.71
655 656 1.743321 CGCTAGGCAGGAAGGAGGAG 61.743 65.000 0.00 0.00 0.00 3.69
656 657 0.397816 GCTAGGCAGGAAGGAGGAGA 60.398 60.000 0.00 0.00 0.00 3.71
657 658 1.761009 GCTAGGCAGGAAGGAGGAGAT 60.761 57.143 0.00 0.00 0.00 2.75
658 659 2.688477 CTAGGCAGGAAGGAGGAGATT 58.312 52.381 0.00 0.00 0.00 2.40
659 660 1.211456 AGGCAGGAAGGAGGAGATTG 58.789 55.000 0.00 0.00 0.00 2.67
660 661 0.182299 GGCAGGAAGGAGGAGATTGG 59.818 60.000 0.00 0.00 0.00 3.16
661 662 0.182299 GCAGGAAGGAGGAGATTGGG 59.818 60.000 0.00 0.00 0.00 4.12
662 663 0.842635 CAGGAAGGAGGAGATTGGGG 59.157 60.000 0.00 0.00 0.00 4.96
663 664 0.725133 AGGAAGGAGGAGATTGGGGA 59.275 55.000 0.00 0.00 0.00 4.81
664 665 1.082879 AGGAAGGAGGAGATTGGGGAA 59.917 52.381 0.00 0.00 0.00 3.97
665 666 1.213182 GGAAGGAGGAGATTGGGGAAC 59.787 57.143 0.00 0.00 0.00 3.62
679 680 1.005394 GGAACCAAACGAGGAGCGA 60.005 57.895 0.00 0.00 44.57 4.93
680 681 1.014564 GGAACCAAACGAGGAGCGAG 61.015 60.000 0.00 0.00 44.57 5.03
681 682 1.004918 AACCAAACGAGGAGCGAGG 60.005 57.895 0.00 0.00 44.57 4.63
682 683 1.755393 AACCAAACGAGGAGCGAGGT 61.755 55.000 0.00 0.00 44.57 3.85
683 684 1.004918 CCAAACGAGGAGCGAGGTT 60.005 57.895 0.00 0.00 44.57 3.50
684 685 0.602905 CCAAACGAGGAGCGAGGTTT 60.603 55.000 0.00 0.00 44.57 3.27
685 686 0.512952 CAAACGAGGAGCGAGGTTTG 59.487 55.000 0.00 1.70 44.57 2.93
686 687 0.602905 AAACGAGGAGCGAGGTTTGG 60.603 55.000 0.00 0.00 44.57 3.28
687 688 1.755393 AACGAGGAGCGAGGTTTGGT 61.755 55.000 0.00 0.00 44.57 3.67
688 689 1.446272 CGAGGAGCGAGGTTTGGTC 60.446 63.158 0.00 0.00 44.57 4.02
689 690 1.446272 GAGGAGCGAGGTTTGGTCG 60.446 63.158 0.00 0.00 40.50 4.79
690 691 2.434359 GGAGCGAGGTTTGGTCGG 60.434 66.667 0.00 0.00 37.91 4.79
691 692 2.434359 GAGCGAGGTTTGGTCGGG 60.434 66.667 0.00 0.00 37.91 5.14
692 693 3.952628 GAGCGAGGTTTGGTCGGGG 62.953 68.421 0.00 0.00 37.91 5.73
693 694 4.324991 GCGAGGTTTGGTCGGGGT 62.325 66.667 0.00 0.00 37.91 4.95
694 695 2.946346 GCGAGGTTTGGTCGGGGTA 61.946 63.158 0.00 0.00 37.91 3.69
695 696 1.079612 CGAGGTTTGGTCGGGGTAC 60.080 63.158 0.00 0.00 33.66 3.34
696 697 1.538687 CGAGGTTTGGTCGGGGTACT 61.539 60.000 0.00 0.00 33.66 2.73
697 698 0.248565 GAGGTTTGGTCGGGGTACTC 59.751 60.000 0.00 0.00 0.00 2.59
698 699 1.196766 AGGTTTGGTCGGGGTACTCC 61.197 60.000 0.00 0.00 0.00 3.85
717 718 2.046604 GGGGGACGGAAAGGAACG 60.047 66.667 0.00 0.00 0.00 3.95
718 719 2.586293 GGGGGACGGAAAGGAACGA 61.586 63.158 0.00 0.00 0.00 3.85
719 720 1.372307 GGGGACGGAAAGGAACGAA 59.628 57.895 0.00 0.00 0.00 3.85
720 721 0.250424 GGGGACGGAAAGGAACGAAA 60.250 55.000 0.00 0.00 0.00 3.46
721 722 0.870393 GGGACGGAAAGGAACGAAAC 59.130 55.000 0.00 0.00 0.00 2.78
744 745 4.929808 CGGAGTTAATTGCACAGAAGTACT 59.070 41.667 0.00 0.00 0.00 2.73
811 812 3.388345 TGCGTGTCAGTACCAACATTA 57.612 42.857 1.67 0.00 0.00 1.90
812 813 3.729966 TGCGTGTCAGTACCAACATTAA 58.270 40.909 1.67 0.00 0.00 1.40
2288 2309 3.567478 AGAGTTGAAGCTTCAGGTTGT 57.433 42.857 27.02 13.52 38.61 3.32
2847 2943 6.371825 GGCTACAACTGAAGCAACTAACTAAT 59.628 38.462 0.00 0.00 40.61 1.73
3148 3244 0.467844 TGCACAAATCCACAGCCACT 60.468 50.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.887545 ACCTATCTGATATCCTTCTTCCGTAG 59.112 42.308 0.00 0.00 0.00 3.51
2 3 6.791371 ACCTATCTGATATCCTTCTTCCGTA 58.209 40.000 0.00 0.00 0.00 4.02
5 6 6.495181 TGTGACCTATCTGATATCCTTCTTCC 59.505 42.308 0.00 0.00 0.00 3.46
6 7 7.531857 TGTGACCTATCTGATATCCTTCTTC 57.468 40.000 0.00 0.00 0.00 2.87
7 8 9.030452 GTATGTGACCTATCTGATATCCTTCTT 57.970 37.037 0.00 0.00 0.00 2.52
8 9 8.397957 AGTATGTGACCTATCTGATATCCTTCT 58.602 37.037 0.00 0.00 0.00 2.85
9 10 8.588290 AGTATGTGACCTATCTGATATCCTTC 57.412 38.462 0.00 0.00 0.00 3.46
10 11 8.811017 CAAGTATGTGACCTATCTGATATCCTT 58.189 37.037 0.00 0.00 0.00 3.36
11 12 7.398618 CCAAGTATGTGACCTATCTGATATCCT 59.601 40.741 0.00 0.00 0.00 3.24
12 13 7.397476 TCCAAGTATGTGACCTATCTGATATCC 59.603 40.741 0.00 0.00 0.00 2.59
13 14 8.247562 GTCCAAGTATGTGACCTATCTGATATC 58.752 40.741 0.00 0.00 0.00 1.63
14 15 7.730332 TGTCCAAGTATGTGACCTATCTGATAT 59.270 37.037 0.00 0.00 0.00 1.63
15 16 7.066781 TGTCCAAGTATGTGACCTATCTGATA 58.933 38.462 0.00 0.00 0.00 2.15
16 17 5.899547 TGTCCAAGTATGTGACCTATCTGAT 59.100 40.000 0.00 0.00 0.00 2.90
17 18 5.269189 TGTCCAAGTATGTGACCTATCTGA 58.731 41.667 0.00 0.00 0.00 3.27
18 19 5.360999 TCTGTCCAAGTATGTGACCTATCTG 59.639 44.000 0.00 0.00 0.00 2.90
19 20 5.519808 TCTGTCCAAGTATGTGACCTATCT 58.480 41.667 0.00 0.00 0.00 1.98
20 21 5.854010 TCTGTCCAAGTATGTGACCTATC 57.146 43.478 0.00 0.00 0.00 2.08
21 22 5.305644 GGATCTGTCCAAGTATGTGACCTAT 59.694 44.000 0.00 0.00 44.42 2.57
22 23 4.649674 GGATCTGTCCAAGTATGTGACCTA 59.350 45.833 0.00 0.00 44.42 3.08
23 24 3.452627 GGATCTGTCCAAGTATGTGACCT 59.547 47.826 0.00 0.00 44.42 3.85
24 25 3.798202 GGATCTGTCCAAGTATGTGACC 58.202 50.000 0.00 0.00 44.42 4.02
36 37 2.646930 TGTTGCATGATGGATCTGTCC 58.353 47.619 0.00 0.00 45.31 4.02
37 38 3.441222 TGTTGTTGCATGATGGATCTGTC 59.559 43.478 0.00 0.00 0.00 3.51
38 39 3.423749 TGTTGTTGCATGATGGATCTGT 58.576 40.909 0.00 0.00 0.00 3.41
39 40 4.421058 CTTGTTGTTGCATGATGGATCTG 58.579 43.478 0.00 0.00 0.00 2.90
40 41 3.119245 GCTTGTTGTTGCATGATGGATCT 60.119 43.478 0.00 0.00 0.00 2.75
41 42 3.184541 GCTTGTTGTTGCATGATGGATC 58.815 45.455 0.00 0.00 0.00 3.36
42 43 2.416296 CGCTTGTTGTTGCATGATGGAT 60.416 45.455 0.00 0.00 0.00 3.41
43 44 1.068402 CGCTTGTTGTTGCATGATGGA 60.068 47.619 0.00 0.00 0.00 3.41
44 45 1.068402 TCGCTTGTTGTTGCATGATGG 60.068 47.619 0.00 0.00 0.00 3.51
45 46 2.334971 TCGCTTGTTGTTGCATGATG 57.665 45.000 0.00 0.00 0.00 3.07
46 47 3.052036 GTTTCGCTTGTTGTTGCATGAT 58.948 40.909 0.00 0.00 0.00 2.45
47 48 2.458951 GTTTCGCTTGTTGTTGCATGA 58.541 42.857 0.00 0.00 0.00 3.07
48 49 1.187704 CGTTTCGCTTGTTGTTGCATG 59.812 47.619 0.00 0.00 0.00 4.06
49 50 1.064803 TCGTTTCGCTTGTTGTTGCAT 59.935 42.857 0.00 0.00 0.00 3.96
50 51 0.448197 TCGTTTCGCTTGTTGTTGCA 59.552 45.000 0.00 0.00 0.00 4.08
51 52 1.112459 CTCGTTTCGCTTGTTGTTGC 58.888 50.000 0.00 0.00 0.00 4.17
52 53 2.284150 TCTCTCGTTTCGCTTGTTGTTG 59.716 45.455 0.00 0.00 0.00 3.33
53 54 2.540101 CTCTCTCGTTTCGCTTGTTGTT 59.460 45.455 0.00 0.00 0.00 2.83
54 55 2.128035 CTCTCTCGTTTCGCTTGTTGT 58.872 47.619 0.00 0.00 0.00 3.32
55 56 2.394708 TCTCTCTCGTTTCGCTTGTTG 58.605 47.619 0.00 0.00 0.00 3.33
56 57 2.293677 TCTCTCTCTCGTTTCGCTTGTT 59.706 45.455 0.00 0.00 0.00 2.83
57 58 1.880675 TCTCTCTCTCGTTTCGCTTGT 59.119 47.619 0.00 0.00 0.00 3.16
58 59 2.620779 TCTCTCTCTCGTTTCGCTTG 57.379 50.000 0.00 0.00 0.00 4.01
59 60 2.666069 CGTTCTCTCTCTCGTTTCGCTT 60.666 50.000 0.00 0.00 0.00 4.68
60 61 1.135916 CGTTCTCTCTCTCGTTTCGCT 60.136 52.381 0.00 0.00 0.00 4.93
61 62 1.252235 CGTTCTCTCTCTCGTTTCGC 58.748 55.000 0.00 0.00 0.00 4.70
62 63 1.197264 ACCGTTCTCTCTCTCGTTTCG 59.803 52.381 0.00 0.00 0.00 3.46
63 64 2.586900 CACCGTTCTCTCTCTCGTTTC 58.413 52.381 0.00 0.00 0.00 2.78
64 65 1.336056 GCACCGTTCTCTCTCTCGTTT 60.336 52.381 0.00 0.00 0.00 3.60
65 66 0.241481 GCACCGTTCTCTCTCTCGTT 59.759 55.000 0.00 0.00 0.00 3.85
66 67 1.587933 GGCACCGTTCTCTCTCTCGT 61.588 60.000 0.00 0.00 0.00 4.18
67 68 1.137825 GGCACCGTTCTCTCTCTCG 59.862 63.158 0.00 0.00 0.00 4.04
68 69 0.454196 GAGGCACCGTTCTCTCTCTC 59.546 60.000 0.00 0.00 0.00 3.20
69 70 0.968393 GGAGGCACCGTTCTCTCTCT 60.968 60.000 0.00 0.00 0.00 3.10
70 71 1.513622 GGAGGCACCGTTCTCTCTC 59.486 63.158 0.00 0.00 0.00 3.20
71 72 3.701454 GGAGGCACCGTTCTCTCT 58.299 61.111 0.00 0.00 0.00 3.10
85 86 5.182950 CAGCATATATAGATAGAGGCCGGAG 59.817 48.000 5.05 0.00 0.00 4.63
86 87 5.073428 CAGCATATATAGATAGAGGCCGGA 58.927 45.833 5.05 0.00 0.00 5.14
87 88 4.321601 GCAGCATATATAGATAGAGGCCGG 60.322 50.000 0.00 0.00 0.00 6.13
88 89 4.522405 AGCAGCATATATAGATAGAGGCCG 59.478 45.833 0.00 0.00 0.00 6.13
89 90 5.047377 GGAGCAGCATATATAGATAGAGGCC 60.047 48.000 0.00 0.00 0.00 5.19
90 91 5.047377 GGGAGCAGCATATATAGATAGAGGC 60.047 48.000 0.00 0.00 0.00 4.70
91 92 5.182950 CGGGAGCAGCATATATAGATAGAGG 59.817 48.000 0.00 0.00 0.00 3.69
92 93 5.767665 ACGGGAGCAGCATATATAGATAGAG 59.232 44.000 0.00 0.00 0.00 2.43
93 94 5.696030 ACGGGAGCAGCATATATAGATAGA 58.304 41.667 0.00 0.00 0.00 1.98
94 95 6.212235 CAACGGGAGCAGCATATATAGATAG 58.788 44.000 0.00 0.00 0.00 2.08
95 96 5.069119 CCAACGGGAGCAGCATATATAGATA 59.931 44.000 0.00 0.00 35.59 1.98
96 97 4.141846 CCAACGGGAGCAGCATATATAGAT 60.142 45.833 0.00 0.00 35.59 1.98
97 98 3.195610 CCAACGGGAGCAGCATATATAGA 59.804 47.826 0.00 0.00 35.59 1.98
98 99 3.055819 ACCAACGGGAGCAGCATATATAG 60.056 47.826 0.00 0.00 38.05 1.31
99 100 2.903784 ACCAACGGGAGCAGCATATATA 59.096 45.455 0.00 0.00 38.05 0.86
100 101 1.699634 ACCAACGGGAGCAGCATATAT 59.300 47.619 0.00 0.00 38.05 0.86
101 102 1.128200 ACCAACGGGAGCAGCATATA 58.872 50.000 0.00 0.00 38.05 0.86
102 103 0.464373 CACCAACGGGAGCAGCATAT 60.464 55.000 0.00 0.00 38.05 1.78
103 104 1.078497 CACCAACGGGAGCAGCATA 60.078 57.895 0.00 0.00 38.05 3.14
104 105 2.360350 CACCAACGGGAGCAGCAT 60.360 61.111 0.00 0.00 38.05 3.79
105 106 3.872603 ACACCAACGGGAGCAGCA 61.873 61.111 0.00 0.00 38.05 4.41
106 107 3.357079 CACACCAACGGGAGCAGC 61.357 66.667 0.00 0.00 38.05 5.25
107 108 1.227823 TTCACACCAACGGGAGCAG 60.228 57.895 0.00 0.00 38.05 4.24
108 109 1.525077 GTTCACACCAACGGGAGCA 60.525 57.895 0.00 0.00 38.05 4.26
109 110 1.098712 TTGTTCACACCAACGGGAGC 61.099 55.000 0.00 0.00 38.05 4.70
110 111 1.384525 TTTGTTCACACCAACGGGAG 58.615 50.000 0.00 0.00 38.05 4.30
111 112 2.060050 ATTTGTTCACACCAACGGGA 57.940 45.000 0.00 0.00 38.05 5.14
112 113 3.832276 CATATTTGTTCACACCAACGGG 58.168 45.455 0.00 0.00 41.29 5.28
113 114 3.241701 GCATATTTGTTCACACCAACGG 58.758 45.455 0.00 0.00 0.00 4.44
114 115 2.908009 CGCATATTTGTTCACACCAACG 59.092 45.455 0.00 0.00 0.00 4.10
115 116 3.668191 CACGCATATTTGTTCACACCAAC 59.332 43.478 0.00 0.00 0.00 3.77
116 117 3.316588 ACACGCATATTTGTTCACACCAA 59.683 39.130 0.00 0.00 0.00 3.67
117 118 2.881513 ACACGCATATTTGTTCACACCA 59.118 40.909 0.00 0.00 0.00 4.17
118 119 3.233578 CACACGCATATTTGTTCACACC 58.766 45.455 0.00 0.00 0.00 4.16
119 120 3.884169 ACACACGCATATTTGTTCACAC 58.116 40.909 0.00 0.00 0.00 3.82
120 121 4.083749 GGTACACACGCATATTTGTTCACA 60.084 41.667 0.00 0.00 0.00 3.58
121 122 4.399978 GGTACACACGCATATTTGTTCAC 58.600 43.478 0.00 0.00 0.00 3.18
122 123 3.123790 CGGTACACACGCATATTTGTTCA 59.876 43.478 0.00 0.00 0.00 3.18
123 124 3.484557 CCGGTACACACGCATATTTGTTC 60.485 47.826 0.00 0.00 0.00 3.18
124 125 2.417239 CCGGTACACACGCATATTTGTT 59.583 45.455 0.00 0.00 0.00 2.83
125 126 2.004017 CCGGTACACACGCATATTTGT 58.996 47.619 0.00 0.00 0.00 2.83
126 127 2.004017 ACCGGTACACACGCATATTTG 58.996 47.619 4.49 0.00 0.00 2.32
127 128 2.389962 ACCGGTACACACGCATATTT 57.610 45.000 4.49 0.00 0.00 1.40
128 129 2.689471 TCTACCGGTACACACGCATATT 59.311 45.455 11.16 0.00 0.00 1.28
129 130 2.300433 TCTACCGGTACACACGCATAT 58.700 47.619 11.16 0.00 0.00 1.78
130 131 1.748950 TCTACCGGTACACACGCATA 58.251 50.000 11.16 0.00 0.00 3.14
131 132 1.066605 GATCTACCGGTACACACGCAT 59.933 52.381 11.16 0.00 0.00 4.73
132 133 0.452987 GATCTACCGGTACACACGCA 59.547 55.000 11.16 0.00 0.00 5.24
133 134 0.452987 TGATCTACCGGTACACACGC 59.547 55.000 11.16 0.00 0.00 5.34
134 135 1.469703 TGTGATCTACCGGTACACACG 59.530 52.381 24.85 11.07 36.72 4.49
136 137 1.820519 GGTGTGATCTACCGGTACACA 59.179 52.381 29.34 27.13 42.43 3.72
137 138 1.820519 TGGTGTGATCTACCGGTACAC 59.179 52.381 23.53 23.53 41.18 2.90
138 139 2.219080 TGGTGTGATCTACCGGTACA 57.781 50.000 11.16 6.63 41.18 2.90
139 140 2.756760 TCTTGGTGTGATCTACCGGTAC 59.243 50.000 11.16 3.46 41.18 3.34
140 141 3.021695 CTCTTGGTGTGATCTACCGGTA 58.978 50.000 14.95 14.95 41.18 4.02
141 142 1.825474 CTCTTGGTGTGATCTACCGGT 59.175 52.381 13.98 13.98 41.18 5.28
142 143 1.471676 GCTCTTGGTGTGATCTACCGG 60.472 57.143 0.00 0.00 41.18 5.28
143 144 1.471676 GGCTCTTGGTGTGATCTACCG 60.472 57.143 12.91 3.03 41.18 4.02
144 145 1.471676 CGGCTCTTGGTGTGATCTACC 60.472 57.143 11.42 11.42 38.71 3.18
145 146 1.204941 ACGGCTCTTGGTGTGATCTAC 59.795 52.381 0.00 0.00 0.00 2.59
146 147 1.557099 ACGGCTCTTGGTGTGATCTA 58.443 50.000 0.00 0.00 0.00 1.98
147 148 0.687354 AACGGCTCTTGGTGTGATCT 59.313 50.000 0.00 0.00 0.00 2.75
148 149 1.464997 GAAACGGCTCTTGGTGTGATC 59.535 52.381 0.00 0.00 0.00 2.92
149 150 1.202758 TGAAACGGCTCTTGGTGTGAT 60.203 47.619 0.00 0.00 0.00 3.06
150 151 0.179234 TGAAACGGCTCTTGGTGTGA 59.821 50.000 0.00 0.00 0.00 3.58
151 152 1.021202 TTGAAACGGCTCTTGGTGTG 58.979 50.000 0.00 0.00 0.00 3.82
152 153 1.757682 TTTGAAACGGCTCTTGGTGT 58.242 45.000 0.00 0.00 0.00 4.16
153 154 2.861462 TTTTGAAACGGCTCTTGGTG 57.139 45.000 0.00 0.00 0.00 4.17
177 178 9.823647 CTAGTATGTCTCTTGGTGTGATATTTT 57.176 33.333 0.00 0.00 0.00 1.82
178 179 7.928706 GCTAGTATGTCTCTTGGTGTGATATTT 59.071 37.037 0.00 0.00 0.00 1.40
179 180 7.069950 TGCTAGTATGTCTCTTGGTGTGATATT 59.930 37.037 0.00 0.00 0.00 1.28
180 181 6.551227 TGCTAGTATGTCTCTTGGTGTGATAT 59.449 38.462 0.00 0.00 0.00 1.63
181 182 5.891551 TGCTAGTATGTCTCTTGGTGTGATA 59.108 40.000 0.00 0.00 0.00 2.15
182 183 4.711846 TGCTAGTATGTCTCTTGGTGTGAT 59.288 41.667 0.00 0.00 0.00 3.06
183 184 4.086457 TGCTAGTATGTCTCTTGGTGTGA 58.914 43.478 0.00 0.00 0.00 3.58
184 185 4.428209 CTGCTAGTATGTCTCTTGGTGTG 58.572 47.826 0.00 0.00 0.00 3.82
185 186 3.118956 GCTGCTAGTATGTCTCTTGGTGT 60.119 47.826 0.00 0.00 0.00 4.16
186 187 3.131933 AGCTGCTAGTATGTCTCTTGGTG 59.868 47.826 0.00 0.00 0.00 4.17
187 188 3.370104 AGCTGCTAGTATGTCTCTTGGT 58.630 45.455 0.00 0.00 0.00 3.67
188 189 4.582656 ACTAGCTGCTAGTATGTCTCTTGG 59.417 45.833 34.35 10.68 44.35 3.61
189 190 5.766150 ACTAGCTGCTAGTATGTCTCTTG 57.234 43.478 34.35 10.86 44.35 3.02
190 191 7.721842 TGATTACTAGCTGCTAGTATGTCTCTT 59.278 37.037 36.63 21.11 45.31 2.85
191 192 7.227873 TGATTACTAGCTGCTAGTATGTCTCT 58.772 38.462 36.63 22.27 45.31 3.10
192 193 7.441890 TGATTACTAGCTGCTAGTATGTCTC 57.558 40.000 36.63 29.45 45.31 3.36
193 194 7.825331 TTGATTACTAGCTGCTAGTATGTCT 57.175 36.000 36.63 25.38 45.31 3.41
194 195 8.138712 ACTTTGATTACTAGCTGCTAGTATGTC 58.861 37.037 36.63 33.43 45.31 3.06
195 196 7.923344 CACTTTGATTACTAGCTGCTAGTATGT 59.077 37.037 36.63 29.80 45.31 2.29
196 197 7.095857 GCACTTTGATTACTAGCTGCTAGTATG 60.096 40.741 36.63 30.53 45.31 2.39
197 198 6.926272 GCACTTTGATTACTAGCTGCTAGTAT 59.074 38.462 36.63 28.32 45.31 2.12
198 199 6.273825 GCACTTTGATTACTAGCTGCTAGTA 58.726 40.000 34.30 34.30 44.35 1.82
200 201 4.208047 CGCACTTTGATTACTAGCTGCTAG 59.792 45.833 29.91 29.91 39.72 3.42
201 202 4.112634 CGCACTTTGATTACTAGCTGCTA 58.887 43.478 9.34 9.34 0.00 3.49
202 203 2.932614 CGCACTTTGATTACTAGCTGCT 59.067 45.455 7.57 7.57 0.00 4.24
203 204 2.537730 GCGCACTTTGATTACTAGCTGC 60.538 50.000 0.30 0.00 0.00 5.25
204 205 2.030946 GGCGCACTTTGATTACTAGCTG 59.969 50.000 10.83 0.00 0.00 4.24
205 206 2.280628 GGCGCACTTTGATTACTAGCT 58.719 47.619 10.83 0.00 0.00 3.32
206 207 1.330829 GGGCGCACTTTGATTACTAGC 59.669 52.381 10.83 0.00 0.00 3.42
207 208 1.940613 GGGGCGCACTTTGATTACTAG 59.059 52.381 10.74 0.00 0.00 2.57
208 209 1.557832 AGGGGCGCACTTTGATTACTA 59.442 47.619 10.74 0.00 0.00 1.82
209 210 0.328258 AGGGGCGCACTTTGATTACT 59.672 50.000 10.74 0.00 0.00 2.24
210 211 1.135402 CAAGGGGCGCACTTTGATTAC 60.135 52.381 28.74 0.00 0.00 1.89
211 212 1.173043 CAAGGGGCGCACTTTGATTA 58.827 50.000 28.74 0.00 0.00 1.75
212 213 0.539438 TCAAGGGGCGCACTTTGATT 60.539 50.000 30.73 5.98 0.00 2.57
213 214 0.323725 ATCAAGGGGCGCACTTTGAT 60.324 50.000 36.03 36.03 0.00 2.57
214 215 1.074775 ATCAAGGGGCGCACTTTGA 59.925 52.632 35.03 35.03 0.00 2.69
215 216 1.213537 CATCAAGGGGCGCACTTTG 59.786 57.895 27.03 27.03 0.00 2.77
216 217 0.827507 AACATCAAGGGGCGCACTTT 60.828 50.000 10.74 4.92 0.00 2.66
217 218 1.228552 AACATCAAGGGGCGCACTT 60.229 52.632 10.74 10.52 0.00 3.16
218 219 1.675641 GAACATCAAGGGGCGCACT 60.676 57.895 10.74 3.20 0.00 4.40
219 220 2.700773 GGAACATCAAGGGGCGCAC 61.701 63.158 10.83 4.83 0.00 5.34
220 221 2.361104 GGAACATCAAGGGGCGCA 60.361 61.111 10.83 0.00 0.00 6.09
221 222 2.361104 TGGAACATCAAGGGGCGC 60.361 61.111 0.00 0.00 0.00 6.53
222 223 1.002134 AGTGGAACATCAAGGGGCG 60.002 57.895 0.00 0.00 44.52 6.13
223 224 0.967380 CCAGTGGAACATCAAGGGGC 60.967 60.000 1.68 0.00 44.52 5.80
224 225 0.323725 CCCAGTGGAACATCAAGGGG 60.324 60.000 11.95 0.00 44.52 4.79
225 226 0.698238 TCCCAGTGGAACATCAAGGG 59.302 55.000 11.95 0.00 44.52 3.95
226 227 1.630369 TCTCCCAGTGGAACATCAAGG 59.370 52.381 11.95 0.00 44.52 3.61
227 228 3.641434 ATCTCCCAGTGGAACATCAAG 57.359 47.619 11.95 0.00 44.52 3.02
228 229 4.081406 CAAATCTCCCAGTGGAACATCAA 58.919 43.478 11.95 0.00 44.52 2.57
229 230 3.074390 ACAAATCTCCCAGTGGAACATCA 59.926 43.478 11.95 0.00 44.52 3.07
230 231 3.441572 CACAAATCTCCCAGTGGAACATC 59.558 47.826 11.95 0.00 44.52 3.06
231 232 3.074390 TCACAAATCTCCCAGTGGAACAT 59.926 43.478 11.95 0.00 44.52 2.71
232 233 2.441375 TCACAAATCTCCCAGTGGAACA 59.559 45.455 11.95 0.00 41.17 3.18
233 234 3.077359 CTCACAAATCTCCCAGTGGAAC 58.923 50.000 11.95 0.00 41.17 3.62
234 235 2.553028 GCTCACAAATCTCCCAGTGGAA 60.553 50.000 11.95 0.00 41.17 3.53
235 236 1.003580 GCTCACAAATCTCCCAGTGGA 59.996 52.381 11.95 0.00 38.75 4.02
236 237 1.271543 TGCTCACAAATCTCCCAGTGG 60.272 52.381 0.63 0.63 33.01 4.00
237 238 2.082231 CTGCTCACAAATCTCCCAGTG 58.918 52.381 0.00 0.00 0.00 3.66
238 239 1.701847 ACTGCTCACAAATCTCCCAGT 59.298 47.619 0.00 0.00 0.00 4.00
239 240 2.486472 ACTGCTCACAAATCTCCCAG 57.514 50.000 0.00 0.00 0.00 4.45
240 241 2.957402 AACTGCTCACAAATCTCCCA 57.043 45.000 0.00 0.00 0.00 4.37
241 242 5.904362 AATTAACTGCTCACAAATCTCCC 57.096 39.130 0.00 0.00 0.00 4.30
242 243 7.147976 ACAAAATTAACTGCTCACAAATCTCC 58.852 34.615 0.00 0.00 0.00 3.71
243 244 8.482429 CAACAAAATTAACTGCTCACAAATCTC 58.518 33.333 0.00 0.00 0.00 2.75
244 245 7.042523 GCAACAAAATTAACTGCTCACAAATCT 60.043 33.333 0.00 0.00 0.00 2.40
245 246 7.065283 GCAACAAAATTAACTGCTCACAAATC 58.935 34.615 0.00 0.00 0.00 2.17
246 247 6.292274 CGCAACAAAATTAACTGCTCACAAAT 60.292 34.615 0.00 0.00 0.00 2.32
247 248 5.005203 CGCAACAAAATTAACTGCTCACAAA 59.995 36.000 0.00 0.00 0.00 2.83
248 249 4.502282 CGCAACAAAATTAACTGCTCACAA 59.498 37.500 0.00 0.00 0.00 3.33
249 250 4.041049 CGCAACAAAATTAACTGCTCACA 58.959 39.130 0.00 0.00 0.00 3.58
250 251 4.286910 TCGCAACAAAATTAACTGCTCAC 58.713 39.130 0.00 0.00 0.00 3.51
251 252 4.036262 ACTCGCAACAAAATTAACTGCTCA 59.964 37.500 0.00 0.00 0.00 4.26
252 253 4.379793 CACTCGCAACAAAATTAACTGCTC 59.620 41.667 0.00 0.00 0.00 4.26
253 254 4.290155 CACTCGCAACAAAATTAACTGCT 58.710 39.130 0.00 0.00 0.00 4.24
254 255 3.121362 GCACTCGCAACAAAATTAACTGC 60.121 43.478 0.00 0.00 38.36 4.40
255 256 4.290155 AGCACTCGCAACAAAATTAACTG 58.710 39.130 0.00 0.00 42.27 3.16
256 257 4.537015 GAGCACTCGCAACAAAATTAACT 58.463 39.130 0.00 0.00 42.27 2.24
257 258 3.357823 CGAGCACTCGCAACAAAATTAAC 59.642 43.478 7.18 0.00 46.50 2.01
258 259 3.550561 CGAGCACTCGCAACAAAATTAA 58.449 40.909 7.18 0.00 46.50 1.40
259 260 3.181826 CGAGCACTCGCAACAAAATTA 57.818 42.857 7.18 0.00 46.50 1.40
260 261 2.036556 CGAGCACTCGCAACAAAATT 57.963 45.000 7.18 0.00 46.50 1.82
261 262 3.753774 CGAGCACTCGCAACAAAAT 57.246 47.368 7.18 0.00 46.50 1.82
271 272 0.796312 TTTGATTTCCGCGAGCACTC 59.204 50.000 8.23 0.00 0.00 3.51
272 273 1.197721 CTTTTGATTTCCGCGAGCACT 59.802 47.619 8.23 0.00 0.00 4.40
273 274 1.196808 TCTTTTGATTTCCGCGAGCAC 59.803 47.619 8.23 0.00 0.00 4.40
274 275 1.196808 GTCTTTTGATTTCCGCGAGCA 59.803 47.619 8.23 0.00 0.00 4.26
275 276 1.196808 TGTCTTTTGATTTCCGCGAGC 59.803 47.619 8.23 0.00 0.00 5.03
276 277 2.736721 TCTGTCTTTTGATTTCCGCGAG 59.263 45.455 8.23 0.00 0.00 5.03
277 278 2.478894 GTCTGTCTTTTGATTTCCGCGA 59.521 45.455 8.23 0.00 0.00 5.87
278 279 2.721797 CGTCTGTCTTTTGATTTCCGCG 60.722 50.000 0.00 0.00 0.00 6.46
279 280 2.412847 CCGTCTGTCTTTTGATTTCCGC 60.413 50.000 0.00 0.00 0.00 5.54
280 281 3.064207 TCCGTCTGTCTTTTGATTTCCG 58.936 45.455 0.00 0.00 0.00 4.30
281 282 3.813166 TGTCCGTCTGTCTTTTGATTTCC 59.187 43.478 0.00 0.00 0.00 3.13
282 283 5.179368 TGATGTCCGTCTGTCTTTTGATTTC 59.821 40.000 0.00 0.00 0.00 2.17
283 284 5.063204 TGATGTCCGTCTGTCTTTTGATTT 58.937 37.500 0.00 0.00 0.00 2.17
284 285 4.641396 TGATGTCCGTCTGTCTTTTGATT 58.359 39.130 0.00 0.00 0.00 2.57
285 286 4.248859 CTGATGTCCGTCTGTCTTTTGAT 58.751 43.478 0.00 0.00 0.00 2.57
286 287 3.554960 CCTGATGTCCGTCTGTCTTTTGA 60.555 47.826 0.00 0.00 0.00 2.69
287 288 2.738846 CCTGATGTCCGTCTGTCTTTTG 59.261 50.000 0.00 0.00 0.00 2.44
288 289 2.872038 GCCTGATGTCCGTCTGTCTTTT 60.872 50.000 0.00 0.00 0.00 2.27
289 290 1.338200 GCCTGATGTCCGTCTGTCTTT 60.338 52.381 0.00 0.00 0.00 2.52
290 291 0.247736 GCCTGATGTCCGTCTGTCTT 59.752 55.000 0.00 0.00 0.00 3.01
291 292 0.613292 AGCCTGATGTCCGTCTGTCT 60.613 55.000 0.00 0.00 0.00 3.41
292 293 0.247736 AAGCCTGATGTCCGTCTGTC 59.752 55.000 0.00 0.00 0.00 3.51
293 294 0.247736 GAAGCCTGATGTCCGTCTGT 59.752 55.000 0.00 0.00 0.00 3.41
294 295 0.534412 AGAAGCCTGATGTCCGTCTG 59.466 55.000 0.00 0.00 0.00 3.51
295 296 0.820871 GAGAAGCCTGATGTCCGTCT 59.179 55.000 0.00 0.00 0.00 4.18
296 297 0.532573 TGAGAAGCCTGATGTCCGTC 59.467 55.000 0.00 0.00 0.00 4.79
297 298 0.534412 CTGAGAAGCCTGATGTCCGT 59.466 55.000 0.00 0.00 0.00 4.69
298 299 0.820226 TCTGAGAAGCCTGATGTCCG 59.180 55.000 0.00 0.00 0.00 4.79
299 300 3.557228 AATCTGAGAAGCCTGATGTCC 57.443 47.619 0.00 0.00 0.00 4.02
300 301 3.876320 GGAAATCTGAGAAGCCTGATGTC 59.124 47.826 0.00 0.00 31.67 3.06
301 302 3.371380 GGGAAATCTGAGAAGCCTGATGT 60.371 47.826 0.00 0.00 0.00 3.06
302 303 3.117963 AGGGAAATCTGAGAAGCCTGATG 60.118 47.826 0.00 0.00 0.00 3.07
303 304 3.121688 AGGGAAATCTGAGAAGCCTGAT 58.878 45.455 0.00 0.00 0.00 2.90
304 305 2.503356 GAGGGAAATCTGAGAAGCCTGA 59.497 50.000 0.00 0.00 0.00 3.86
305 306 2.504996 AGAGGGAAATCTGAGAAGCCTG 59.495 50.000 0.00 0.00 0.00 4.85
306 307 2.844369 AGAGGGAAATCTGAGAAGCCT 58.156 47.619 0.00 0.00 0.00 4.58
315 316 3.615155 GCTTTAGTGCAGAGGGAAATCT 58.385 45.455 0.00 0.00 0.00 2.40
316 317 2.685388 GGCTTTAGTGCAGAGGGAAATC 59.315 50.000 0.00 0.00 34.04 2.17
317 318 2.310052 AGGCTTTAGTGCAGAGGGAAAT 59.690 45.455 0.00 0.00 34.04 2.17
318 319 1.705186 AGGCTTTAGTGCAGAGGGAAA 59.295 47.619 0.00 0.00 34.04 3.13
319 320 1.362224 AGGCTTTAGTGCAGAGGGAA 58.638 50.000 0.00 0.00 34.04 3.97
320 321 2.111384 CTAGGCTTTAGTGCAGAGGGA 58.889 52.381 0.00 0.00 34.04 4.20
321 322 2.102252 CTCTAGGCTTTAGTGCAGAGGG 59.898 54.545 0.00 0.00 32.68 4.30
322 323 2.102252 CCTCTAGGCTTTAGTGCAGAGG 59.898 54.545 11.72 11.72 42.67 3.69
323 324 3.451141 CCTCTAGGCTTTAGTGCAGAG 57.549 52.381 0.00 0.00 34.71 3.35
336 337 4.554036 GCCAAGCCCGCCTCTAGG 62.554 72.222 0.00 0.00 38.53 3.02
337 338 3.329542 TTGCCAAGCCCGCCTCTAG 62.330 63.158 0.00 0.00 0.00 2.43
338 339 3.326578 TTGCCAAGCCCGCCTCTA 61.327 61.111 0.00 0.00 0.00 2.43
348 349 2.341176 GCTGCTTGGGTTGCCAAG 59.659 61.111 0.00 0.00 46.90 3.61
349 350 2.443577 TGCTGCTTGGGTTGCCAA 60.444 55.556 0.00 0.00 0.00 4.52
350 351 2.913578 CTGCTGCTTGGGTTGCCA 60.914 61.111 0.00 0.00 0.00 4.92
351 352 4.368543 GCTGCTGCTTGGGTTGCC 62.369 66.667 8.53 0.00 36.03 4.52
352 353 4.368543 GGCTGCTGCTTGGGTTGC 62.369 66.667 15.64 0.00 39.59 4.17
353 354 4.047059 CGGCTGCTGCTTGGGTTG 62.047 66.667 15.64 0.00 39.59 3.77
358 359 2.332362 CTAATGCCGGCTGCTGCTTG 62.332 60.000 29.70 8.29 42.00 4.01
359 360 2.045045 TAATGCCGGCTGCTGCTT 60.045 55.556 29.70 13.16 42.00 3.91
360 361 1.971505 TACTAATGCCGGCTGCTGCT 61.972 55.000 29.70 8.15 42.00 4.24
361 362 0.886490 ATACTAATGCCGGCTGCTGC 60.886 55.000 29.70 7.10 42.00 5.25
362 363 1.265095 CAATACTAATGCCGGCTGCTG 59.735 52.381 29.70 17.32 42.00 4.41
363 364 1.597742 CAATACTAATGCCGGCTGCT 58.402 50.000 29.70 14.29 42.00 4.24
364 365 0.040067 GCAATACTAATGCCGGCTGC 60.040 55.000 29.70 22.08 37.85 5.25
365 366 1.308047 TGCAATACTAATGCCGGCTG 58.692 50.000 29.70 15.94 43.16 4.85
366 367 2.051334 TTGCAATACTAATGCCGGCT 57.949 45.000 29.70 11.31 43.16 5.52
367 368 2.861462 TTTGCAATACTAATGCCGGC 57.139 45.000 22.73 22.73 43.16 6.13
392 393 2.585330 GGCAGAGGGGAGTAGTACTAC 58.415 57.143 23.03 23.03 36.35 2.73
393 394 1.498145 GGGCAGAGGGGAGTAGTACTA 59.502 57.143 1.88 0.00 0.00 1.82
394 395 0.262285 GGGCAGAGGGGAGTAGTACT 59.738 60.000 1.37 1.37 0.00 2.73
395 396 0.262285 AGGGCAGAGGGGAGTAGTAC 59.738 60.000 0.00 0.00 0.00 2.73
396 397 0.556747 GAGGGCAGAGGGGAGTAGTA 59.443 60.000 0.00 0.00 0.00 1.82
397 398 1.311747 GAGGGCAGAGGGGAGTAGT 59.688 63.158 0.00 0.00 0.00 2.73
398 399 1.458588 GGAGGGCAGAGGGGAGTAG 60.459 68.421 0.00 0.00 0.00 2.57
399 400 2.696893 GGAGGGCAGAGGGGAGTA 59.303 66.667 0.00 0.00 0.00 2.59
400 401 4.787280 CGGAGGGCAGAGGGGAGT 62.787 72.222 0.00 0.00 0.00 3.85
414 415 1.227664 CCTCTACTCTGCTCCCGGA 59.772 63.158 0.73 0.00 0.00 5.14
415 416 0.821711 CTCCTCTACTCTGCTCCCGG 60.822 65.000 0.00 0.00 0.00 5.73
416 417 0.821711 CCTCCTCTACTCTGCTCCCG 60.822 65.000 0.00 0.00 0.00 5.14
417 418 0.469144 CCCTCCTCTACTCTGCTCCC 60.469 65.000 0.00 0.00 0.00 4.30
418 419 1.112916 GCCCTCCTCTACTCTGCTCC 61.113 65.000 0.00 0.00 0.00 4.70
419 420 1.112916 GGCCCTCCTCTACTCTGCTC 61.113 65.000 0.00 0.00 0.00 4.26
420 421 1.075600 GGCCCTCCTCTACTCTGCT 60.076 63.158 0.00 0.00 0.00 4.24
421 422 2.137528 GGGCCCTCCTCTACTCTGC 61.138 68.421 17.04 0.00 0.00 4.26
422 423 1.458588 GGGGCCCTCCTCTACTCTG 60.459 68.421 24.38 0.00 35.33 3.35
423 424 1.627460 AGGGGCCCTCCTCTACTCT 60.627 63.158 22.67 3.19 42.85 3.24
424 425 1.152419 GAGGGGCCCTCCTCTACTC 60.152 68.421 38.09 14.82 45.31 2.59
425 426 3.029580 GAGGGGCCCTCCTCTACT 58.970 66.667 38.09 9.14 45.31 2.57
443 444 3.072468 TTACAGAGGGCCGACGGG 61.072 66.667 17.22 0.00 0.00 5.28
444 445 2.494918 CTTACAGAGGGCCGACGG 59.505 66.667 10.29 10.29 0.00 4.79
445 446 2.202756 GCTTACAGAGGGCCGACG 60.203 66.667 0.00 0.00 0.00 5.12
446 447 2.187163 GGCTTACAGAGGGCCGAC 59.813 66.667 0.00 0.00 36.37 4.79
449 450 4.858680 GCCGGCTTACAGAGGGCC 62.859 72.222 22.15 0.00 42.18 5.80
450 451 4.858680 GGCCGGCTTACAGAGGGC 62.859 72.222 28.56 0.41 43.01 5.19
451 452 4.530857 CGGCCGGCTTACAGAGGG 62.531 72.222 28.56 0.58 0.00 4.30
453 454 4.451150 TGCGGCCGGCTTACAGAG 62.451 66.667 29.38 10.09 44.05 3.35
454 455 4.451150 CTGCGGCCGGCTTACAGA 62.451 66.667 29.38 8.91 44.05 3.41
475 476 1.681166 GCATAGATAGGCAGGCCATGG 60.681 57.143 13.63 7.63 38.92 3.66
476 477 1.281287 AGCATAGATAGGCAGGCCATG 59.719 52.381 13.63 8.03 38.92 3.66
477 478 1.281287 CAGCATAGATAGGCAGGCCAT 59.719 52.381 13.63 4.09 38.92 4.40
478 479 0.689055 CAGCATAGATAGGCAGGCCA 59.311 55.000 13.63 0.00 38.92 5.36
479 480 0.035630 CCAGCATAGATAGGCAGGCC 60.036 60.000 0.97 0.97 33.13 5.19
480 481 0.689623 ACCAGCATAGATAGGCAGGC 59.310 55.000 7.71 0.00 42.38 4.85
481 482 1.973515 TCACCAGCATAGATAGGCAGG 59.026 52.381 6.41 6.41 43.90 4.85
482 483 2.366590 TGTCACCAGCATAGATAGGCAG 59.633 50.000 0.00 0.00 35.07 4.85
483 484 2.366590 CTGTCACCAGCATAGATAGGCA 59.633 50.000 0.00 0.00 35.07 4.75
484 485 2.289320 CCTGTCACCAGCATAGATAGGC 60.289 54.545 0.00 0.00 37.38 3.93
485 486 3.006323 GTCCTGTCACCAGCATAGATAGG 59.994 52.174 0.00 0.00 40.71 2.57
486 487 3.304996 CGTCCTGTCACCAGCATAGATAG 60.305 52.174 0.00 0.00 37.38 2.08
487 488 2.623416 CGTCCTGTCACCAGCATAGATA 59.377 50.000 0.00 0.00 37.38 1.98
488 489 1.410517 CGTCCTGTCACCAGCATAGAT 59.589 52.381 0.00 0.00 37.38 1.98
489 490 0.817654 CGTCCTGTCACCAGCATAGA 59.182 55.000 0.00 0.00 37.38 1.98
490 491 0.807667 GCGTCCTGTCACCAGCATAG 60.808 60.000 0.00 0.00 37.38 2.23
491 492 1.218047 GCGTCCTGTCACCAGCATA 59.782 57.895 0.00 0.00 37.38 3.14
492 493 1.257750 TAGCGTCCTGTCACCAGCAT 61.258 55.000 0.00 0.00 37.38 3.79
493 494 1.877576 CTAGCGTCCTGTCACCAGCA 61.878 60.000 0.00 0.00 37.38 4.41
494 495 1.153745 CTAGCGTCCTGTCACCAGC 60.154 63.158 0.00 0.00 37.38 4.85
495 496 1.153745 GCTAGCGTCCTGTCACCAG 60.154 63.158 0.00 0.00 38.50 4.00
496 497 0.323087 TAGCTAGCGTCCTGTCACCA 60.323 55.000 9.55 0.00 0.00 4.17
497 498 0.382515 CTAGCTAGCGTCCTGTCACC 59.617 60.000 8.05 0.00 0.00 4.02
498 499 0.248702 GCTAGCTAGCGTCCTGTCAC 60.249 60.000 28.89 0.98 39.82 3.67
499 500 2.107705 GCTAGCTAGCGTCCTGTCA 58.892 57.895 28.89 0.00 39.82 3.58
509 510 4.951963 GGCCCGCACGCTAGCTAG 62.952 72.222 16.84 16.84 0.00 3.42
534 535 4.812476 TGATTCCGTCCGGCGCTG 62.812 66.667 9.96 9.96 39.71 5.18
535 536 4.514577 CTGATTCCGTCCGGCGCT 62.515 66.667 7.64 0.51 39.71 5.92
537 538 4.891727 CCCTGATTCCGTCCGGCG 62.892 72.222 10.75 10.75 40.95 6.46
538 539 3.447025 CTCCCTGATTCCGTCCGGC 62.447 68.421 0.00 0.00 34.68 6.13
539 540 2.797278 CCTCCCTGATTCCGTCCGG 61.797 68.421 0.00 0.00 0.00 5.14
540 541 1.739338 CTCCTCCCTGATTCCGTCCG 61.739 65.000 0.00 0.00 0.00 4.79
541 542 0.397254 TCTCCTCCCTGATTCCGTCC 60.397 60.000 0.00 0.00 0.00 4.79
542 543 1.342819 CATCTCCTCCCTGATTCCGTC 59.657 57.143 0.00 0.00 0.00 4.79
543 544 1.418334 CATCTCCTCCCTGATTCCGT 58.582 55.000 0.00 0.00 0.00 4.69
544 545 0.034616 GCATCTCCTCCCTGATTCCG 59.965 60.000 0.00 0.00 0.00 4.30
545 546 1.072015 CTGCATCTCCTCCCTGATTCC 59.928 57.143 0.00 0.00 0.00 3.01
546 547 2.045524 TCTGCATCTCCTCCCTGATTC 58.954 52.381 0.00 0.00 0.00 2.52
547 548 2.172293 GTTCTGCATCTCCTCCCTGATT 59.828 50.000 0.00 0.00 0.00 2.57
548 549 1.767681 GTTCTGCATCTCCTCCCTGAT 59.232 52.381 0.00 0.00 0.00 2.90
549 550 1.198713 GTTCTGCATCTCCTCCCTGA 58.801 55.000 0.00 0.00 0.00 3.86
550 551 0.179936 GGTTCTGCATCTCCTCCCTG 59.820 60.000 0.00 0.00 0.00 4.45
551 552 1.333636 CGGTTCTGCATCTCCTCCCT 61.334 60.000 0.00 0.00 0.00 4.20
552 553 1.144936 CGGTTCTGCATCTCCTCCC 59.855 63.158 0.00 0.00 0.00 4.30
553 554 0.537188 TTCGGTTCTGCATCTCCTCC 59.463 55.000 0.00 0.00 0.00 4.30
554 555 1.646189 GTTCGGTTCTGCATCTCCTC 58.354 55.000 0.00 0.00 0.00 3.71
555 556 0.250513 GGTTCGGTTCTGCATCTCCT 59.749 55.000 0.00 0.00 0.00 3.69
556 557 0.250513 AGGTTCGGTTCTGCATCTCC 59.749 55.000 0.00 0.00 0.00 3.71
557 558 1.338200 ACAGGTTCGGTTCTGCATCTC 60.338 52.381 0.00 0.00 34.57 2.75
558 559 0.687354 ACAGGTTCGGTTCTGCATCT 59.313 50.000 0.00 0.00 34.57 2.90
559 560 1.464997 GAACAGGTTCGGTTCTGCATC 59.535 52.381 0.00 0.00 41.05 3.91
560 561 1.523758 GAACAGGTTCGGTTCTGCAT 58.476 50.000 0.00 0.00 41.05 3.96
561 562 3.000815 GAACAGGTTCGGTTCTGCA 57.999 52.632 0.00 0.00 41.05 4.41
570 571 3.119096 GAGCCGGCGAACAGGTTC 61.119 66.667 23.20 6.54 36.29 3.62
571 572 4.699522 GGAGCCGGCGAACAGGTT 62.700 66.667 23.20 0.00 0.00 3.50
633 634 4.899239 CCTTCCTGCCTAGCGCGG 62.899 72.222 8.83 0.00 44.20 6.46
634 635 3.781770 CTCCTTCCTGCCTAGCGCG 62.782 68.421 0.00 0.00 42.08 6.86
635 636 2.107953 CTCCTTCCTGCCTAGCGC 59.892 66.667 0.00 0.00 38.31 5.92
636 637 1.743321 CTCCTCCTTCCTGCCTAGCG 61.743 65.000 0.00 0.00 0.00 4.26
637 638 0.397816 TCTCCTCCTTCCTGCCTAGC 60.398 60.000 0.00 0.00 0.00 3.42
638 639 2.368221 CAATCTCCTCCTTCCTGCCTAG 59.632 54.545 0.00 0.00 0.00 3.02
639 640 2.402564 CAATCTCCTCCTTCCTGCCTA 58.597 52.381 0.00 0.00 0.00 3.93
640 641 1.211456 CAATCTCCTCCTTCCTGCCT 58.789 55.000 0.00 0.00 0.00 4.75
641 642 0.182299 CCAATCTCCTCCTTCCTGCC 59.818 60.000 0.00 0.00 0.00 4.85
642 643 0.182299 CCCAATCTCCTCCTTCCTGC 59.818 60.000 0.00 0.00 0.00 4.85
643 644 0.842635 CCCCAATCTCCTCCTTCCTG 59.157 60.000 0.00 0.00 0.00 3.86
644 645 0.725133 TCCCCAATCTCCTCCTTCCT 59.275 55.000 0.00 0.00 0.00 3.36
645 646 1.213182 GTTCCCCAATCTCCTCCTTCC 59.787 57.143 0.00 0.00 0.00 3.46
646 647 1.213182 GGTTCCCCAATCTCCTCCTTC 59.787 57.143 0.00 0.00 0.00 3.46
647 648 1.299939 GGTTCCCCAATCTCCTCCTT 58.700 55.000 0.00 0.00 0.00 3.36
648 649 0.121197 TGGTTCCCCAATCTCCTCCT 59.879 55.000 0.00 0.00 37.98 3.69
649 650 0.999712 TTGGTTCCCCAATCTCCTCC 59.000 55.000 0.00 0.00 45.93 4.30
658 659 1.758592 CTCCTCGTTTGGTTCCCCA 59.241 57.895 0.00 0.00 39.65 4.96
659 660 1.674651 GCTCCTCGTTTGGTTCCCC 60.675 63.158 0.00 0.00 0.00 4.81
660 661 2.033194 CGCTCCTCGTTTGGTTCCC 61.033 63.158 0.00 0.00 0.00 3.97
661 662 1.005394 TCGCTCCTCGTTTGGTTCC 60.005 57.895 0.00 0.00 39.67 3.62
662 663 1.014564 CCTCGCTCCTCGTTTGGTTC 61.015 60.000 0.00 0.00 39.67 3.62
663 664 1.004918 CCTCGCTCCTCGTTTGGTT 60.005 57.895 0.00 0.00 39.67 3.67
664 665 1.755393 AACCTCGCTCCTCGTTTGGT 61.755 55.000 0.00 0.00 38.28 3.67
665 666 0.602905 AAACCTCGCTCCTCGTTTGG 60.603 55.000 0.00 0.00 39.67 3.28
666 667 0.512952 CAAACCTCGCTCCTCGTTTG 59.487 55.000 0.00 0.00 39.16 2.93
667 668 0.602905 CCAAACCTCGCTCCTCGTTT 60.603 55.000 0.00 0.00 39.67 3.60
668 669 1.004918 CCAAACCTCGCTCCTCGTT 60.005 57.895 0.00 0.00 39.67 3.85
669 670 2.156051 GACCAAACCTCGCTCCTCGT 62.156 60.000 0.00 0.00 39.67 4.18
670 671 1.446272 GACCAAACCTCGCTCCTCG 60.446 63.158 0.00 0.00 40.15 4.63
671 672 1.446272 CGACCAAACCTCGCTCCTC 60.446 63.158 0.00 0.00 0.00 3.71
672 673 2.657237 CGACCAAACCTCGCTCCT 59.343 61.111 0.00 0.00 0.00 3.69
673 674 2.434359 CCGACCAAACCTCGCTCC 60.434 66.667 0.00 0.00 0.00 4.70
674 675 2.434359 CCCGACCAAACCTCGCTC 60.434 66.667 0.00 0.00 0.00 5.03
675 676 4.016706 CCCCGACCAAACCTCGCT 62.017 66.667 0.00 0.00 0.00 4.93
676 677 2.946346 TACCCCGACCAAACCTCGC 61.946 63.158 0.00 0.00 0.00 5.03
677 678 1.079612 GTACCCCGACCAAACCTCG 60.080 63.158 0.00 0.00 0.00 4.63
678 679 0.248565 GAGTACCCCGACCAAACCTC 59.751 60.000 0.00 0.00 0.00 3.85
679 680 1.196766 GGAGTACCCCGACCAAACCT 61.197 60.000 0.00 0.00 0.00 3.50
680 681 1.297689 GGAGTACCCCGACCAAACC 59.702 63.158 0.00 0.00 0.00 3.27
700 701 2.046604 CGTTCCTTTCCGTCCCCC 60.047 66.667 0.00 0.00 0.00 5.40
701 702 0.250424 TTTCGTTCCTTTCCGTCCCC 60.250 55.000 0.00 0.00 0.00 4.81
702 703 0.870393 GTTTCGTTCCTTTCCGTCCC 59.130 55.000 0.00 0.00 0.00 4.46
703 704 0.509929 CGTTTCGTTCCTTTCCGTCC 59.490 55.000 0.00 0.00 0.00 4.79
704 705 0.509929 CCGTTTCGTTCCTTTCCGTC 59.490 55.000 0.00 0.00 0.00 4.79
705 706 0.104671 TCCGTTTCGTTCCTTTCCGT 59.895 50.000 0.00 0.00 0.00 4.69
706 707 0.788391 CTCCGTTTCGTTCCTTTCCG 59.212 55.000 0.00 0.00 0.00 4.30
707 708 1.875009 ACTCCGTTTCGTTCCTTTCC 58.125 50.000 0.00 0.00 0.00 3.13
708 709 5.602458 ATTAACTCCGTTTCGTTCCTTTC 57.398 39.130 0.00 0.00 0.00 2.62
709 710 5.754778 CAATTAACTCCGTTTCGTTCCTTT 58.245 37.500 0.00 0.00 0.00 3.11
710 711 4.319984 GCAATTAACTCCGTTTCGTTCCTT 60.320 41.667 0.00 0.00 0.00 3.36
711 712 3.187842 GCAATTAACTCCGTTTCGTTCCT 59.812 43.478 0.00 0.00 0.00 3.36
712 713 3.058777 TGCAATTAACTCCGTTTCGTTCC 60.059 43.478 0.00 0.00 0.00 3.62
713 714 3.904234 GTGCAATTAACTCCGTTTCGTTC 59.096 43.478 0.00 0.00 0.00 3.95
714 715 3.312973 TGTGCAATTAACTCCGTTTCGTT 59.687 39.130 0.00 0.00 0.00 3.85
715 716 2.873472 TGTGCAATTAACTCCGTTTCGT 59.127 40.909 0.00 0.00 0.00 3.85
716 717 3.185594 TCTGTGCAATTAACTCCGTTTCG 59.814 43.478 0.00 0.00 0.00 3.46
717 718 4.742438 TCTGTGCAATTAACTCCGTTTC 57.258 40.909 0.00 0.00 0.00 2.78
718 719 4.578928 ACTTCTGTGCAATTAACTCCGTTT 59.421 37.500 0.00 0.00 0.00 3.60
719 720 4.134563 ACTTCTGTGCAATTAACTCCGTT 58.865 39.130 0.00 0.00 0.00 4.44
720 721 3.740115 ACTTCTGTGCAATTAACTCCGT 58.260 40.909 0.00 0.00 0.00 4.69
721 722 4.929808 AGTACTTCTGTGCAATTAACTCCG 59.070 41.667 0.00 0.00 0.00 4.63
774 775 3.911365 CACGCAAAAATTAGCAATCGTGA 59.089 39.130 5.64 0.00 45.89 4.35
811 812 7.585579 AGTCCAATTTGCAAAAATTTGGATT 57.414 28.000 32.73 28.56 38.31 3.01
812 813 8.688747 TTAGTCCAATTTGCAAAAATTTGGAT 57.311 26.923 32.73 25.65 38.31 3.41
919 920 1.141019 GTCCTAATCAGCACGCGGA 59.859 57.895 12.47 0.00 0.00 5.54
931 932 4.124351 CGCACCGGCTCGTCCTAA 62.124 66.667 0.00 0.00 38.10 2.69
2288 2309 8.034804 GCTTTTTATTTCCCTTAAGCAGATCAA 58.965 33.333 0.00 0.00 38.23 2.57
2847 2943 6.183360 GGCTTAGTTGCAGGCAAGATATTAAA 60.183 38.462 6.99 0.00 36.52 1.52
3148 3244 7.680442 TTTGCTTGTGTATCTTAATAGCACA 57.320 32.000 0.00 0.00 36.94 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.