Multiple sequence alignment - TraesCS3A01G086300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G086300 chr3A 100.000 2849 0 0 1 2849 55724667 55721819 0.000000e+00 5262.0
1 TraesCS3A01G086300 chr3A 99.644 281 1 0 111 391 22785520 22785800 5.440000e-142 514.0
2 TraesCS3A01G086300 chr3A 93.651 189 10 2 385 573 467353417 467353231 6.010000e-72 281.0
3 TraesCS3A01G086300 chr3B 93.299 1955 118 6 881 2830 68467196 68465250 0.000000e+00 2872.0
4 TraesCS3A01G086300 chr3B 78.768 2256 352 68 605 2830 571450731 571452889 0.000000e+00 1395.0
5 TraesCS3A01G086300 chr3B 81.172 239 29 11 589 821 68467784 68467556 8.110000e-41 178.0
6 TraesCS3A01G086300 chr3D 91.020 2127 175 7 712 2830 43801944 43799826 0.000000e+00 2856.0
7 TraesCS3A01G086300 chr3D 77.523 218 41 4 2483 2696 435304397 435304610 1.070000e-24 124.0
8 TraesCS3A01G086300 chr6B 84.574 1841 254 17 1007 2830 95431303 95433130 0.000000e+00 1799.0
9 TraesCS3A01G086300 chr6B 99.291 282 2 0 112 393 279087814 279088095 7.040000e-141 510.0
10 TraesCS3A01G086300 chr6B 99.642 279 1 0 112 390 637877769 637877491 7.040000e-141 510.0
11 TraesCS3A01G086300 chr6B 94.340 53 2 1 1 53 644469913 644469964 2.350000e-11 80.5
12 TraesCS3A01G086300 chr5B 99.296 284 2 0 107 390 669691259 669690976 5.440000e-142 514.0
13 TraesCS3A01G086300 chr2B 99.643 280 1 0 111 390 90445058 90444779 1.960000e-141 512.0
14 TraesCS3A01G086300 chr2B 99.288 281 2 0 111 391 564821551 564821831 2.530000e-140 508.0
15 TraesCS3A01G086300 chr2B 85.792 183 21 5 390 572 385537169 385537346 3.750000e-44 189.0
16 TraesCS3A01G086300 chr7A 99.288 281 2 0 112 392 529331516 529331796 2.530000e-140 508.0
17 TraesCS3A01G086300 chr5A 99.288 281 2 0 111 391 693141409 693141129 2.530000e-140 508.0
18 TraesCS3A01G086300 chr5A 90.503 179 14 3 385 562 688357571 688357747 1.710000e-57 233.0
19 TraesCS3A01G086300 chr6A 99.286 280 2 0 112 391 133803115 133802836 9.110000e-140 507.0
20 TraesCS3A01G086300 chr6A 96.875 32 0 1 540 570 12233532 12233501 5.000000e-03 52.8
21 TraesCS3A01G086300 chr4A 90.654 107 9 1 462 567 699617472 699617578 1.060000e-29 141.0
22 TraesCS3A01G086300 chr7B 83.721 129 21 0 448 576 641073699 641073571 3.850000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G086300 chr3A 55721819 55724667 2848 True 5262 5262 100.0000 1 2849 1 chr3A.!!$R1 2848
1 TraesCS3A01G086300 chr3B 68465250 68467784 2534 True 1525 2872 87.2355 589 2830 2 chr3B.!!$R1 2241
2 TraesCS3A01G086300 chr3B 571450731 571452889 2158 False 1395 1395 78.7680 605 2830 1 chr3B.!!$F1 2225
3 TraesCS3A01G086300 chr3D 43799826 43801944 2118 True 2856 2856 91.0200 712 2830 1 chr3D.!!$R1 2118
4 TraesCS3A01G086300 chr6B 95431303 95433130 1827 False 1799 1799 84.5740 1007 2830 1 chr6B.!!$F1 1823

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 397 0.035056 ATGACCAGCCTAAGGTGTGC 60.035 55.0 0.0 0.0 40.09 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2282 2643 1.002857 AGAAATGGACTGGGGAAGGG 58.997 55.0 0.0 0.0 0.0 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.068881 ATGGAGGTGTGGTCCGTG 58.931 61.111 0.00 0.00 36.82 4.94
18 19 2.592993 ATGGAGGTGTGGTCCGTGG 61.593 63.158 0.00 0.00 36.82 4.94
19 20 4.699522 GGAGGTGTGGTCCGTGGC 62.700 72.222 0.00 0.00 0.00 5.01
20 21 4.699522 GAGGTGTGGTCCGTGGCC 62.700 72.222 0.00 0.00 0.00 5.36
37 38 4.473520 CTGGGGCTCCGTGCGATT 62.474 66.667 0.00 0.00 44.05 3.34
38 39 3.976701 CTGGGGCTCCGTGCGATTT 62.977 63.158 0.00 0.00 44.05 2.17
39 40 2.188469 GGGGCTCCGTGCGATTTA 59.812 61.111 0.00 0.00 44.05 1.40
40 41 1.887707 GGGGCTCCGTGCGATTTAG 60.888 63.158 0.00 0.00 44.05 1.85
41 42 1.143183 GGGCTCCGTGCGATTTAGA 59.857 57.895 0.00 0.00 44.05 2.10
42 43 0.876342 GGGCTCCGTGCGATTTAGAG 60.876 60.000 0.00 0.00 44.05 2.43
43 44 0.102481 GGCTCCGTGCGATTTAGAGA 59.898 55.000 0.00 0.00 44.05 3.10
44 45 1.482278 GCTCCGTGCGATTTAGAGAG 58.518 55.000 0.00 0.00 0.00 3.20
45 46 1.482278 CTCCGTGCGATTTAGAGAGC 58.518 55.000 0.00 0.00 0.00 4.09
46 47 0.815095 TCCGTGCGATTTAGAGAGCA 59.185 50.000 0.00 0.00 37.26 4.26
47 48 1.202302 TCCGTGCGATTTAGAGAGCAG 60.202 52.381 0.00 0.00 40.53 4.24
48 49 1.469940 CCGTGCGATTTAGAGAGCAGT 60.470 52.381 0.00 0.00 40.53 4.40
49 50 2.263077 CGTGCGATTTAGAGAGCAGTT 58.737 47.619 0.00 0.00 40.53 3.16
50 51 2.280183 CGTGCGATTTAGAGAGCAGTTC 59.720 50.000 0.00 0.00 40.53 3.01
51 52 2.605366 GTGCGATTTAGAGAGCAGTTCC 59.395 50.000 0.00 0.00 40.53 3.62
52 53 2.497675 TGCGATTTAGAGAGCAGTTCCT 59.502 45.455 0.00 0.00 34.39 3.36
53 54 3.699538 TGCGATTTAGAGAGCAGTTCCTA 59.300 43.478 0.00 0.00 34.39 2.94
54 55 4.045783 GCGATTTAGAGAGCAGTTCCTAC 58.954 47.826 0.00 0.00 0.00 3.18
55 56 4.283678 CGATTTAGAGAGCAGTTCCTACG 58.716 47.826 0.00 0.00 0.00 3.51
56 57 3.505464 TTTAGAGAGCAGTTCCTACGC 57.495 47.619 0.00 0.00 0.00 4.42
57 58 1.015109 TAGAGAGCAGTTCCTACGCG 58.985 55.000 3.53 3.53 0.00 6.01
58 59 0.961358 AGAGAGCAGTTCCTACGCGT 60.961 55.000 19.17 19.17 0.00 6.01
59 60 0.523757 GAGAGCAGTTCCTACGCGTC 60.524 60.000 18.63 0.00 0.00 5.19
60 61 0.961358 AGAGCAGTTCCTACGCGTCT 60.961 55.000 18.63 3.09 0.00 4.18
61 62 0.798771 GAGCAGTTCCTACGCGTCTG 60.799 60.000 18.63 18.05 0.00 3.51
62 63 1.211969 GCAGTTCCTACGCGTCTGA 59.788 57.895 24.08 16.09 0.00 3.27
63 64 0.798771 GCAGTTCCTACGCGTCTGAG 60.799 60.000 24.08 13.85 0.00 3.35
64 65 0.522180 CAGTTCCTACGCGTCTGAGT 59.478 55.000 18.63 0.02 0.00 3.41
65 66 1.736126 CAGTTCCTACGCGTCTGAGTA 59.264 52.381 18.63 0.00 0.00 2.59
66 67 2.008329 AGTTCCTACGCGTCTGAGTAG 58.992 52.381 18.63 6.19 45.02 2.57
71 72 0.580578 TACGCGTCTGAGTAGATCGC 59.419 55.000 18.63 11.46 43.49 4.58
72 73 1.369448 CGCGTCTGAGTAGATCGCC 60.369 63.158 0.00 0.00 43.76 5.54
73 74 1.369448 GCGTCTGAGTAGATCGCCG 60.369 63.158 10.79 0.00 42.35 6.46
74 75 1.369448 CGTCTGAGTAGATCGCCGC 60.369 63.158 0.00 0.00 34.94 6.53
75 76 1.008309 GTCTGAGTAGATCGCCGCC 60.008 63.158 0.00 0.00 34.94 6.13
76 77 2.050895 CTGAGTAGATCGCCGCCG 60.051 66.667 0.00 0.00 0.00 6.46
117 118 2.792599 CGTCGTCTCGCTAAGGCT 59.207 61.111 0.00 0.00 36.09 4.58
118 119 1.583967 CGTCGTCTCGCTAAGGCTG 60.584 63.158 0.00 0.00 36.09 4.85
119 120 1.226717 GTCGTCTCGCTAAGGCTGG 60.227 63.158 0.00 0.00 36.09 4.85
120 121 1.677966 TCGTCTCGCTAAGGCTGGT 60.678 57.895 0.00 0.00 36.09 4.00
121 122 1.226717 CGTCTCGCTAAGGCTGGTC 60.227 63.158 0.00 0.00 36.09 4.02
122 123 1.890894 GTCTCGCTAAGGCTGGTCA 59.109 57.895 0.00 0.00 36.09 4.02
123 124 0.461961 GTCTCGCTAAGGCTGGTCAT 59.538 55.000 0.00 0.00 36.09 3.06
124 125 1.681793 GTCTCGCTAAGGCTGGTCATA 59.318 52.381 0.00 0.00 36.09 2.15
125 126 1.957177 TCTCGCTAAGGCTGGTCATAG 59.043 52.381 0.00 0.00 36.09 2.23
126 127 1.683917 CTCGCTAAGGCTGGTCATAGT 59.316 52.381 0.00 0.00 36.09 2.12
127 128 1.409064 TCGCTAAGGCTGGTCATAGTG 59.591 52.381 0.00 0.00 36.09 2.74
128 129 1.539065 CGCTAAGGCTGGTCATAGTGG 60.539 57.143 0.00 0.00 36.09 4.00
129 130 1.202698 GCTAAGGCTGGTCATAGTGGG 60.203 57.143 0.00 0.00 35.22 4.61
130 131 2.398588 CTAAGGCTGGTCATAGTGGGA 58.601 52.381 0.00 0.00 0.00 4.37
131 132 1.207791 AAGGCTGGTCATAGTGGGAG 58.792 55.000 0.00 0.00 0.00 4.30
132 133 0.043334 AGGCTGGTCATAGTGGGAGT 59.957 55.000 0.00 0.00 0.00 3.85
133 134 1.291033 AGGCTGGTCATAGTGGGAGTA 59.709 52.381 0.00 0.00 0.00 2.59
134 135 2.116238 GGCTGGTCATAGTGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
135 136 2.158943 GGCTGGTCATAGTGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
136 137 2.500098 GCTGGTCATAGTGGGAGTAACA 59.500 50.000 0.00 0.00 0.00 2.41
137 138 3.134804 GCTGGTCATAGTGGGAGTAACAT 59.865 47.826 0.00 0.00 0.00 2.71
138 139 4.344102 GCTGGTCATAGTGGGAGTAACATA 59.656 45.833 0.00 0.00 0.00 2.29
139 140 5.509840 GCTGGTCATAGTGGGAGTAACATAG 60.510 48.000 0.00 0.00 0.00 2.23
140 141 4.899457 TGGTCATAGTGGGAGTAACATAGG 59.101 45.833 0.00 0.00 0.00 2.57
141 142 4.900054 GGTCATAGTGGGAGTAACATAGGT 59.100 45.833 0.00 0.00 0.00 3.08
142 143 6.073314 GGTCATAGTGGGAGTAACATAGGTA 58.927 44.000 0.00 0.00 0.00 3.08
143 144 6.208994 GGTCATAGTGGGAGTAACATAGGTAG 59.791 46.154 0.00 0.00 0.00 3.18
144 145 6.776603 GTCATAGTGGGAGTAACATAGGTAGT 59.223 42.308 0.00 0.00 0.00 2.73
145 146 7.941238 GTCATAGTGGGAGTAACATAGGTAGTA 59.059 40.741 0.00 0.00 0.00 1.82
146 147 8.505246 TCATAGTGGGAGTAACATAGGTAGTAA 58.495 37.037 0.00 0.00 0.00 2.24
147 148 8.574737 CATAGTGGGAGTAACATAGGTAGTAAC 58.425 40.741 0.00 0.00 0.00 2.50
148 149 6.496743 AGTGGGAGTAACATAGGTAGTAACA 58.503 40.000 0.00 0.00 0.00 2.41
149 150 7.130775 AGTGGGAGTAACATAGGTAGTAACAT 58.869 38.462 0.00 0.00 0.00 2.71
150 151 8.284435 AGTGGGAGTAACATAGGTAGTAACATA 58.716 37.037 0.00 0.00 0.00 2.29
151 152 8.574737 GTGGGAGTAACATAGGTAGTAACATAG 58.425 40.741 0.00 0.00 0.00 2.23
152 153 8.505246 TGGGAGTAACATAGGTAGTAACATAGA 58.495 37.037 0.00 0.00 0.00 1.98
153 154 9.531158 GGGAGTAACATAGGTAGTAACATAGAT 57.469 37.037 0.00 0.00 0.00 1.98
155 156 9.843334 GAGTAACATAGGTAGTAACATAGATGC 57.157 37.037 0.00 0.00 0.00 3.91
156 157 8.804204 AGTAACATAGGTAGTAACATAGATGCC 58.196 37.037 0.00 0.00 0.00 4.40
157 158 7.612065 AACATAGGTAGTAACATAGATGCCA 57.388 36.000 0.00 0.00 0.00 4.92
158 159 6.994221 ACATAGGTAGTAACATAGATGCCAC 58.006 40.000 0.00 0.00 0.00 5.01
159 160 6.553476 ACATAGGTAGTAACATAGATGCCACA 59.447 38.462 0.00 0.00 0.00 4.17
160 161 7.235606 ACATAGGTAGTAACATAGATGCCACAT 59.764 37.037 0.00 0.00 0.00 3.21
161 162 8.749354 CATAGGTAGTAACATAGATGCCACATA 58.251 37.037 0.00 0.00 0.00 2.29
162 163 7.612065 AGGTAGTAACATAGATGCCACATAA 57.388 36.000 0.00 0.00 0.00 1.90
163 164 7.671302 AGGTAGTAACATAGATGCCACATAAG 58.329 38.462 0.00 0.00 0.00 1.73
164 165 6.369065 GGTAGTAACATAGATGCCACATAAGC 59.631 42.308 0.00 0.00 0.00 3.09
165 166 5.928976 AGTAACATAGATGCCACATAAGCA 58.071 37.500 0.00 0.00 45.94 3.91
166 167 6.356556 AGTAACATAGATGCCACATAAGCAA 58.643 36.000 0.00 0.00 44.83 3.91
167 168 6.828273 AGTAACATAGATGCCACATAAGCAAA 59.172 34.615 0.00 0.00 44.83 3.68
168 169 6.528537 AACATAGATGCCACATAAGCAAAA 57.471 33.333 0.00 0.00 44.83 2.44
169 170 6.528537 ACATAGATGCCACATAAGCAAAAA 57.471 33.333 0.00 0.00 44.83 1.94
170 171 7.116075 ACATAGATGCCACATAAGCAAAAAT 57.884 32.000 0.00 0.00 44.83 1.82
171 172 6.982141 ACATAGATGCCACATAAGCAAAAATG 59.018 34.615 0.00 0.00 44.83 2.32
172 173 4.761975 AGATGCCACATAAGCAAAAATGG 58.238 39.130 0.00 0.00 44.83 3.16
173 174 4.223477 AGATGCCACATAAGCAAAAATGGT 59.777 37.500 0.00 0.00 44.83 3.55
174 175 3.661944 TGCCACATAAGCAAAAATGGTG 58.338 40.909 0.00 0.00 37.28 4.17
175 176 3.323115 TGCCACATAAGCAAAAATGGTGA 59.677 39.130 0.00 0.00 37.28 4.02
176 177 4.020396 TGCCACATAAGCAAAAATGGTGAT 60.020 37.500 0.00 0.00 37.28 3.06
177 178 4.330620 GCCACATAAGCAAAAATGGTGATG 59.669 41.667 4.26 4.26 35.01 3.07
178 179 5.481105 CCACATAAGCAAAAATGGTGATGT 58.519 37.500 5.40 5.40 40.81 3.06
179 180 6.397831 CACATAAGCAAAAATGGTGATGTG 57.602 37.500 18.78 18.78 46.34 3.21
180 181 5.481105 ACATAAGCAAAAATGGTGATGTGG 58.519 37.500 9.58 0.00 39.24 4.17
181 182 2.460757 AGCAAAAATGGTGATGTGGC 57.539 45.000 0.00 0.00 0.00 5.01
182 183 1.693062 AGCAAAAATGGTGATGTGGCA 59.307 42.857 0.00 0.00 0.00 4.92
183 184 2.104451 AGCAAAAATGGTGATGTGGCAA 59.896 40.909 0.00 0.00 0.00 4.52
184 185 2.481185 GCAAAAATGGTGATGTGGCAAG 59.519 45.455 0.00 0.00 0.00 4.01
185 186 3.731089 CAAAAATGGTGATGTGGCAAGT 58.269 40.909 0.00 0.00 0.00 3.16
186 187 4.798924 GCAAAAATGGTGATGTGGCAAGTA 60.799 41.667 0.00 0.00 0.00 2.24
187 188 4.789012 AAAATGGTGATGTGGCAAGTAG 57.211 40.909 0.00 0.00 0.00 2.57
188 189 3.439857 AATGGTGATGTGGCAAGTAGT 57.560 42.857 0.00 0.00 0.00 2.73
189 190 2.949177 TGGTGATGTGGCAAGTAGTT 57.051 45.000 0.00 0.00 0.00 2.24
190 191 4.568072 ATGGTGATGTGGCAAGTAGTTA 57.432 40.909 0.00 0.00 0.00 2.24
191 192 4.359434 TGGTGATGTGGCAAGTAGTTAA 57.641 40.909 0.00 0.00 0.00 2.01
192 193 4.917385 TGGTGATGTGGCAAGTAGTTAAT 58.083 39.130 0.00 0.00 0.00 1.40
193 194 4.699735 TGGTGATGTGGCAAGTAGTTAATG 59.300 41.667 0.00 0.00 0.00 1.90
194 195 4.941263 GGTGATGTGGCAAGTAGTTAATGA 59.059 41.667 0.00 0.00 0.00 2.57
195 196 5.065218 GGTGATGTGGCAAGTAGTTAATGAG 59.935 44.000 0.00 0.00 0.00 2.90
196 197 5.065218 GTGATGTGGCAAGTAGTTAATGAGG 59.935 44.000 0.00 0.00 0.00 3.86
197 198 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
198 199 4.832248 TGTGGCAAGTAGTTAATGAGGAG 58.168 43.478 0.00 0.00 0.00 3.69
199 200 4.530553 TGTGGCAAGTAGTTAATGAGGAGA 59.469 41.667 0.00 0.00 0.00 3.71
200 201 5.112686 GTGGCAAGTAGTTAATGAGGAGAG 58.887 45.833 0.00 0.00 0.00 3.20
201 202 5.023452 TGGCAAGTAGTTAATGAGGAGAGA 58.977 41.667 0.00 0.00 0.00 3.10
202 203 5.127845 TGGCAAGTAGTTAATGAGGAGAGAG 59.872 44.000 0.00 0.00 0.00 3.20
203 204 5.452636 GGCAAGTAGTTAATGAGGAGAGAGG 60.453 48.000 0.00 0.00 0.00 3.69
204 205 5.596845 CAAGTAGTTAATGAGGAGAGAGGC 58.403 45.833 0.00 0.00 0.00 4.70
205 206 4.873010 AGTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
206 207 5.273208 AGTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
207 208 5.721960 AGTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
208 209 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
209 210 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
210 211 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
211 212 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
212 213 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
213 214 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
214 215 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
215 216 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
216 217 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
217 218 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
218 219 5.902431 AGGAGAGAGGCAAATAGAGTAACAT 59.098 40.000 0.00 0.00 0.00 2.71
219 220 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
220 221 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
221 222 8.371699 GGAGAGAGGCAAATAGAGTAACATAAT 58.628 37.037 0.00 0.00 0.00 1.28
240 241 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
241 242 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
242 243 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
243 244 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
244 245 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
245 246 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
246 247 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
247 248 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
248 249 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
249 250 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
250 251 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
251 252 1.742831 TCACATAGCGGTTTCCAATGC 59.257 47.619 0.00 0.00 0.00 3.56
252 253 1.472082 CACATAGCGGTTTCCAATGCA 59.528 47.619 0.00 0.00 0.00 3.96
253 254 2.099592 CACATAGCGGTTTCCAATGCAT 59.900 45.455 0.00 0.00 0.00 3.96
254 255 3.314913 CACATAGCGGTTTCCAATGCATA 59.685 43.478 0.00 0.00 0.00 3.14
255 256 3.951037 ACATAGCGGTTTCCAATGCATAA 59.049 39.130 0.00 0.00 0.00 1.90
256 257 4.584325 ACATAGCGGTTTCCAATGCATAAT 59.416 37.500 0.00 0.00 0.00 1.28
257 258 3.441496 AGCGGTTTCCAATGCATAATG 57.559 42.857 0.00 0.00 0.00 1.90
258 259 3.023119 AGCGGTTTCCAATGCATAATGA 58.977 40.909 0.00 0.00 0.00 2.57
259 260 3.067180 AGCGGTTTCCAATGCATAATGAG 59.933 43.478 0.00 0.00 0.00 2.90
260 261 3.181487 GCGGTTTCCAATGCATAATGAGT 60.181 43.478 0.00 0.00 0.00 3.41
261 262 4.601019 CGGTTTCCAATGCATAATGAGTC 58.399 43.478 0.00 0.00 0.00 3.36
262 263 4.336433 CGGTTTCCAATGCATAATGAGTCT 59.664 41.667 0.00 0.00 0.00 3.24
263 264 5.527214 CGGTTTCCAATGCATAATGAGTCTA 59.473 40.000 0.00 0.00 0.00 2.59
264 265 6.511767 CGGTTTCCAATGCATAATGAGTCTAC 60.512 42.308 0.00 0.00 0.00 2.59
265 266 6.318648 GGTTTCCAATGCATAATGAGTCTACA 59.681 38.462 0.00 0.00 0.00 2.74
266 267 7.148086 GGTTTCCAATGCATAATGAGTCTACAA 60.148 37.037 0.00 0.00 0.00 2.41
267 268 7.936496 TTCCAATGCATAATGAGTCTACAAA 57.064 32.000 0.00 0.00 0.00 2.83
268 269 7.558161 TCCAATGCATAATGAGTCTACAAAG 57.442 36.000 0.00 0.00 0.00 2.77
269 270 7.112122 TCCAATGCATAATGAGTCTACAAAGT 58.888 34.615 0.00 0.00 0.00 2.66
270 271 8.264347 TCCAATGCATAATGAGTCTACAAAGTA 58.736 33.333 0.00 0.00 0.00 2.24
271 272 8.892723 CCAATGCATAATGAGTCTACAAAGTAA 58.107 33.333 0.00 0.00 0.00 2.24
282 283 9.162764 TGAGTCTACAAAGTAATAAATGAAGGC 57.837 33.333 0.00 0.00 0.00 4.35
283 284 9.162764 GAGTCTACAAAGTAATAAATGAAGGCA 57.837 33.333 0.00 0.00 0.00 4.75
284 285 9.515226 AGTCTACAAAGTAATAAATGAAGGCAA 57.485 29.630 0.00 0.00 0.00 4.52
285 286 9.556030 GTCTACAAAGTAATAAATGAAGGCAAC 57.444 33.333 0.00 0.00 0.00 4.17
300 301 3.067684 GGCAACTATGTTACCACACCT 57.932 47.619 0.00 0.00 35.03 4.00
301 302 4.210724 GGCAACTATGTTACCACACCTA 57.789 45.455 0.00 0.00 35.03 3.08
302 303 4.777463 GGCAACTATGTTACCACACCTAT 58.223 43.478 0.00 0.00 35.03 2.57
303 304 4.574828 GGCAACTATGTTACCACACCTATG 59.425 45.833 0.00 0.00 35.03 2.23
304 305 5.424757 GCAACTATGTTACCACACCTATGA 58.575 41.667 0.00 0.00 35.03 2.15
305 306 5.293569 GCAACTATGTTACCACACCTATGAC 59.706 44.000 0.00 0.00 35.03 3.06
306 307 6.403049 CAACTATGTTACCACACCTATGACA 58.597 40.000 0.00 0.00 35.03 3.58
307 308 5.974108 ACTATGTTACCACACCTATGACAC 58.026 41.667 0.00 0.00 35.03 3.67
308 309 5.720041 ACTATGTTACCACACCTATGACACT 59.280 40.000 0.00 0.00 35.03 3.55
309 310 6.893554 ACTATGTTACCACACCTATGACACTA 59.106 38.462 0.00 0.00 35.03 2.74
310 311 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
311 312 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
312 313 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
313 314 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
314 315 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
315 316 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
316 317 4.021229 CACACCTATGACACTACCCACTA 58.979 47.826 0.00 0.00 0.00 2.74
317 318 4.649674 CACACCTATGACACTACCCACTAT 59.350 45.833 0.00 0.00 0.00 2.12
318 319 4.649674 ACACCTATGACACTACCCACTATG 59.350 45.833 0.00 0.00 0.00 2.23
319 320 4.893524 CACCTATGACACTACCCACTATGA 59.106 45.833 0.00 0.00 0.00 2.15
320 321 5.362717 CACCTATGACACTACCCACTATGAA 59.637 44.000 0.00 0.00 0.00 2.57
321 322 5.598830 ACCTATGACACTACCCACTATGAAG 59.401 44.000 0.00 0.00 0.00 3.02
322 323 5.011125 CCTATGACACTACCCACTATGAAGG 59.989 48.000 0.00 0.00 0.00 3.46
323 324 3.786553 TGACACTACCCACTATGAAGGT 58.213 45.455 0.00 0.00 37.69 3.50
324 325 4.938028 TGACACTACCCACTATGAAGGTA 58.062 43.478 0.00 0.00 35.02 3.08
331 332 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
332 333 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
333 334 7.983166 ACCCACTATGAAGGTAGTAACATAA 57.017 36.000 0.00 0.00 33.29 1.90
334 335 8.383374 ACCCACTATGAAGGTAGTAACATAAA 57.617 34.615 0.00 0.00 33.29 1.40
335 336 8.262933 ACCCACTATGAAGGTAGTAACATAAAC 58.737 37.037 0.00 0.00 33.29 2.01
336 337 8.483758 CCCACTATGAAGGTAGTAACATAAACT 58.516 37.037 0.00 0.00 33.29 2.66
372 373 9.401058 TGTATGTTACTAGTCTAAGTTACTCCC 57.599 37.037 0.00 0.00 31.82 4.30
373 374 7.894753 ATGTTACTAGTCTAAGTTACTCCCC 57.105 40.000 0.00 0.00 31.82 4.81
374 375 6.793478 TGTTACTAGTCTAAGTTACTCCCCA 58.207 40.000 0.00 0.00 31.82 4.96
375 376 6.660949 TGTTACTAGTCTAAGTTACTCCCCAC 59.339 42.308 0.00 0.00 31.82 4.61
376 377 5.533333 ACTAGTCTAAGTTACTCCCCACT 57.467 43.478 0.00 0.00 0.00 4.00
377 378 6.649041 ACTAGTCTAAGTTACTCCCCACTA 57.351 41.667 0.00 0.00 0.00 2.74
378 379 7.223472 ACTAGTCTAAGTTACTCCCCACTAT 57.777 40.000 0.00 0.00 0.00 2.12
379 380 7.061688 ACTAGTCTAAGTTACTCCCCACTATG 58.938 42.308 0.00 0.00 0.00 2.23
380 381 6.088541 AGTCTAAGTTACTCCCCACTATGA 57.911 41.667 0.00 0.00 0.00 2.15
381 382 5.892686 AGTCTAAGTTACTCCCCACTATGAC 59.107 44.000 0.00 0.00 0.00 3.06
382 383 5.068855 GTCTAAGTTACTCCCCACTATGACC 59.931 48.000 0.00 0.00 0.00 4.02
383 384 3.484953 AGTTACTCCCCACTATGACCA 57.515 47.619 0.00 0.00 0.00 4.02
384 385 3.375699 AGTTACTCCCCACTATGACCAG 58.624 50.000 0.00 0.00 0.00 4.00
385 386 1.789523 TACTCCCCACTATGACCAGC 58.210 55.000 0.00 0.00 0.00 4.85
386 387 0.983378 ACTCCCCACTATGACCAGCC 60.983 60.000 0.00 0.00 0.00 4.85
387 388 0.692419 CTCCCCACTATGACCAGCCT 60.692 60.000 0.00 0.00 0.00 4.58
388 389 0.639943 TCCCCACTATGACCAGCCTA 59.360 55.000 0.00 0.00 0.00 3.93
389 390 1.009060 TCCCCACTATGACCAGCCTAA 59.991 52.381 0.00 0.00 0.00 2.69
390 391 1.417890 CCCCACTATGACCAGCCTAAG 59.582 57.143 0.00 0.00 0.00 2.18
391 392 1.417890 CCCACTATGACCAGCCTAAGG 59.582 57.143 0.00 0.00 0.00 2.69
392 393 2.119495 CCACTATGACCAGCCTAAGGT 58.881 52.381 0.00 0.00 43.46 3.50
393 394 2.158900 CCACTATGACCAGCCTAAGGTG 60.159 54.545 0.00 0.00 40.09 4.00
394 395 2.501723 CACTATGACCAGCCTAAGGTGT 59.498 50.000 0.00 0.00 40.09 4.16
395 396 2.501723 ACTATGACCAGCCTAAGGTGTG 59.498 50.000 0.00 0.00 40.09 3.82
396 397 0.035056 ATGACCAGCCTAAGGTGTGC 60.035 55.000 0.00 0.00 40.09 4.57
397 398 1.377333 GACCAGCCTAAGGTGTGCC 60.377 63.158 0.00 0.00 40.09 5.01
399 400 1.377725 CCAGCCTAAGGTGTGCCTG 60.378 63.158 0.00 0.00 46.33 4.85
400 401 2.042831 CAGCCTAAGGTGTGCCTGC 61.043 63.158 0.00 0.00 46.33 4.85
401 402 3.127533 GCCTAAGGTGTGCCTGCG 61.128 66.667 0.00 0.00 46.33 5.18
402 403 2.347490 CCTAAGGTGTGCCTGCGT 59.653 61.111 0.00 0.00 46.33 5.24
403 404 1.741770 CCTAAGGTGTGCCTGCGTC 60.742 63.158 0.00 0.00 46.33 5.19
404 405 1.005037 CTAAGGTGTGCCTGCGTCA 60.005 57.895 0.00 0.00 46.33 4.35
405 406 0.602638 CTAAGGTGTGCCTGCGTCAA 60.603 55.000 0.00 0.00 46.33 3.18
406 407 0.036164 TAAGGTGTGCCTGCGTCAAT 59.964 50.000 0.00 0.00 46.33 2.57
407 408 0.036164 AAGGTGTGCCTGCGTCAATA 59.964 50.000 0.00 0.00 46.33 1.90
408 409 0.036164 AGGTGTGCCTGCGTCAATAA 59.964 50.000 0.00 0.00 45.05 1.40
409 410 0.168128 GGTGTGCCTGCGTCAATAAC 59.832 55.000 0.00 0.00 0.00 1.89
410 411 0.168128 GTGTGCCTGCGTCAATAACC 59.832 55.000 0.00 0.00 0.00 2.85
411 412 0.036164 TGTGCCTGCGTCAATAACCT 59.964 50.000 0.00 0.00 0.00 3.50
412 413 0.727398 GTGCCTGCGTCAATAACCTC 59.273 55.000 0.00 0.00 0.00 3.85
413 414 0.739462 TGCCTGCGTCAATAACCTCG 60.739 55.000 0.00 0.00 0.00 4.63
414 415 1.429148 GCCTGCGTCAATAACCTCGG 61.429 60.000 0.00 0.00 0.00 4.63
415 416 1.429148 CCTGCGTCAATAACCTCGGC 61.429 60.000 0.00 0.00 0.00 5.54
416 417 1.752501 CTGCGTCAATAACCTCGGCG 61.753 60.000 0.00 0.00 0.00 6.46
417 418 1.808390 GCGTCAATAACCTCGGCGT 60.808 57.895 6.85 0.00 0.00 5.68
418 419 1.995991 CGTCAATAACCTCGGCGTG 59.004 57.895 6.85 3.87 0.00 5.34
419 420 0.734942 CGTCAATAACCTCGGCGTGT 60.735 55.000 6.85 2.46 0.00 4.49
420 421 0.997196 GTCAATAACCTCGGCGTGTC 59.003 55.000 6.85 0.00 0.00 3.67
421 422 0.108520 TCAATAACCTCGGCGTGTCC 60.109 55.000 6.85 0.00 0.00 4.02
422 423 0.108329 CAATAACCTCGGCGTGTCCT 60.108 55.000 6.85 0.00 0.00 3.85
423 424 0.175073 AATAACCTCGGCGTGTCCTC 59.825 55.000 6.85 0.00 0.00 3.71
424 425 2.001361 ATAACCTCGGCGTGTCCTCG 62.001 60.000 6.85 0.00 0.00 4.63
432 433 4.135153 CGTGTCCTCGGGGAGCTG 62.135 72.222 2.77 0.00 43.12 4.24
433 434 2.680352 GTGTCCTCGGGGAGCTGA 60.680 66.667 2.77 0.00 43.12 4.26
434 435 2.363018 TGTCCTCGGGGAGCTGAG 60.363 66.667 2.77 0.00 43.12 3.35
435 436 2.363147 GTCCTCGGGGAGCTGAGT 60.363 66.667 2.77 0.00 43.12 3.41
436 437 1.985116 GTCCTCGGGGAGCTGAGTT 60.985 63.158 2.77 0.00 43.12 3.01
437 438 1.229209 TCCTCGGGGAGCTGAGTTT 60.229 57.895 0.00 0.00 36.57 2.66
438 439 1.078848 CCTCGGGGAGCTGAGTTTG 60.079 63.158 0.00 0.00 33.58 2.93
439 440 1.544825 CCTCGGGGAGCTGAGTTTGA 61.545 60.000 0.00 0.00 33.58 2.69
440 441 0.539051 CTCGGGGAGCTGAGTTTGAT 59.461 55.000 0.00 0.00 0.00 2.57
441 442 0.984230 TCGGGGAGCTGAGTTTGATT 59.016 50.000 0.00 0.00 0.00 2.57
442 443 1.351017 TCGGGGAGCTGAGTTTGATTT 59.649 47.619 0.00 0.00 0.00 2.17
443 444 1.470098 CGGGGAGCTGAGTTTGATTTG 59.530 52.381 0.00 0.00 0.00 2.32
444 445 2.519013 GGGGAGCTGAGTTTGATTTGT 58.481 47.619 0.00 0.00 0.00 2.83
445 446 2.229784 GGGGAGCTGAGTTTGATTTGTG 59.770 50.000 0.00 0.00 0.00 3.33
446 447 3.149196 GGGAGCTGAGTTTGATTTGTGA 58.851 45.455 0.00 0.00 0.00 3.58
447 448 3.569701 GGGAGCTGAGTTTGATTTGTGAA 59.430 43.478 0.00 0.00 0.00 3.18
448 449 4.540824 GGAGCTGAGTTTGATTTGTGAAC 58.459 43.478 0.00 0.00 0.00 3.18
449 450 4.276926 GGAGCTGAGTTTGATTTGTGAACT 59.723 41.667 0.00 0.00 36.40 3.01
450 451 5.470098 GGAGCTGAGTTTGATTTGTGAACTA 59.530 40.000 0.00 0.00 34.02 2.24
451 452 6.305693 AGCTGAGTTTGATTTGTGAACTAC 57.694 37.500 0.00 0.00 34.02 2.73
452 453 5.239525 AGCTGAGTTTGATTTGTGAACTACC 59.760 40.000 0.00 0.00 34.02 3.18
453 454 5.562890 GCTGAGTTTGATTTGTGAACTACCC 60.563 44.000 0.00 0.00 34.02 3.69
454 455 5.441500 TGAGTTTGATTTGTGAACTACCCA 58.558 37.500 0.00 0.00 34.02 4.51
455 456 5.888724 TGAGTTTGATTTGTGAACTACCCAA 59.111 36.000 0.00 0.00 34.02 4.12
456 457 6.378564 TGAGTTTGATTTGTGAACTACCCAAA 59.621 34.615 0.00 0.00 34.02 3.28
457 458 7.093727 TGAGTTTGATTTGTGAACTACCCAAAA 60.094 33.333 0.00 0.00 34.02 2.44
458 459 7.791029 AGTTTGATTTGTGAACTACCCAAAAT 58.209 30.769 0.00 0.00 32.22 1.82
459 460 8.919145 AGTTTGATTTGTGAACTACCCAAAATA 58.081 29.630 0.00 0.00 32.22 1.40
460 461 8.974408 GTTTGATTTGTGAACTACCCAAAATAC 58.026 33.333 0.00 0.00 32.39 1.89
461 462 7.222000 TGATTTGTGAACTACCCAAAATACC 57.778 36.000 0.00 0.00 32.39 2.73
462 463 6.209788 TGATTTGTGAACTACCCAAAATACCC 59.790 38.462 0.00 0.00 32.39 3.69
463 464 5.327737 TTGTGAACTACCCAAAATACCCT 57.672 39.130 0.00 0.00 0.00 4.34
464 465 5.327737 TGTGAACTACCCAAAATACCCTT 57.672 39.130 0.00 0.00 0.00 3.95
465 466 6.451292 TGTGAACTACCCAAAATACCCTTA 57.549 37.500 0.00 0.00 0.00 2.69
466 467 6.850234 TGTGAACTACCCAAAATACCCTTAA 58.150 36.000 0.00 0.00 0.00 1.85
467 468 7.471890 TGTGAACTACCCAAAATACCCTTAAT 58.528 34.615 0.00 0.00 0.00 1.40
468 469 7.394923 TGTGAACTACCCAAAATACCCTTAATG 59.605 37.037 0.00 0.00 0.00 1.90
469 470 6.378848 TGAACTACCCAAAATACCCTTAATGC 59.621 38.462 0.00 0.00 0.00 3.56
470 471 5.205821 ACTACCCAAAATACCCTTAATGCC 58.794 41.667 0.00 0.00 0.00 4.40
471 472 4.346478 ACCCAAAATACCCTTAATGCCT 57.654 40.909 0.00 0.00 0.00 4.75
472 473 4.694512 ACCCAAAATACCCTTAATGCCTT 58.305 39.130 0.00 0.00 0.00 4.35
473 474 5.844601 ACCCAAAATACCCTTAATGCCTTA 58.155 37.500 0.00 0.00 0.00 2.69
474 475 6.265304 ACCCAAAATACCCTTAATGCCTTAA 58.735 36.000 0.00 0.00 0.00 1.85
475 476 6.906339 ACCCAAAATACCCTTAATGCCTTAAT 59.094 34.615 0.00 0.00 0.00 1.40
476 477 8.068733 ACCCAAAATACCCTTAATGCCTTAATA 58.931 33.333 0.00 0.00 0.00 0.98
477 478 9.100197 CCCAAAATACCCTTAATGCCTTAATAT 57.900 33.333 0.00 0.00 0.00 1.28
482 483 9.462606 AATACCCTTAATGCCTTAATATACTGC 57.537 33.333 0.00 0.00 0.00 4.40
483 484 6.848069 ACCCTTAATGCCTTAATATACTGCA 58.152 36.000 0.00 0.00 36.23 4.41
484 485 6.715264 ACCCTTAATGCCTTAATATACTGCAC 59.285 38.462 0.00 0.00 34.33 4.57
485 486 6.714810 CCCTTAATGCCTTAATATACTGCACA 59.285 38.462 0.00 0.00 34.33 4.57
486 487 7.230510 CCCTTAATGCCTTAATATACTGCACAA 59.769 37.037 0.00 0.00 34.33 3.33
487 488 8.629158 CCTTAATGCCTTAATATACTGCACAAA 58.371 33.333 0.00 0.00 34.33 2.83
490 491 8.876275 AATGCCTTAATATACTGCACAAATTG 57.124 30.769 0.00 0.00 34.33 2.32
491 492 7.403312 TGCCTTAATATACTGCACAAATTGT 57.597 32.000 0.00 0.00 0.00 2.71
504 505 5.289917 CACAAATTGTGCGGTAGTATTGA 57.710 39.130 13.51 0.00 41.89 2.57
505 506 5.879237 CACAAATTGTGCGGTAGTATTGAT 58.121 37.500 13.51 0.00 41.89 2.57
506 507 5.965334 CACAAATTGTGCGGTAGTATTGATC 59.035 40.000 13.51 0.00 41.89 2.92
507 508 5.645929 ACAAATTGTGCGGTAGTATTGATCA 59.354 36.000 0.00 0.00 0.00 2.92
508 509 6.150307 ACAAATTGTGCGGTAGTATTGATCAA 59.850 34.615 11.26 11.26 0.00 2.57
509 510 6.942532 AATTGTGCGGTAGTATTGATCAAT 57.057 33.333 23.75 23.75 34.93 2.57
510 511 5.984233 TTGTGCGGTAGTATTGATCAATC 57.016 39.130 23.95 15.14 32.50 2.67
511 512 5.276461 TGTGCGGTAGTATTGATCAATCT 57.724 39.130 23.95 20.46 32.50 2.40
512 513 5.049828 TGTGCGGTAGTATTGATCAATCTG 58.950 41.667 23.95 15.17 32.50 2.90
513 514 4.449068 GTGCGGTAGTATTGATCAATCTGG 59.551 45.833 23.95 14.11 32.50 3.86
514 515 4.100963 TGCGGTAGTATTGATCAATCTGGT 59.899 41.667 23.95 9.98 32.50 4.00
515 516 4.449068 GCGGTAGTATTGATCAATCTGGTG 59.551 45.833 23.95 11.97 32.50 4.17
516 517 4.449068 CGGTAGTATTGATCAATCTGGTGC 59.551 45.833 23.95 10.56 32.50 5.01
517 518 4.449068 GGTAGTATTGATCAATCTGGTGCG 59.551 45.833 23.95 0.00 32.50 5.34
518 519 4.142609 AGTATTGATCAATCTGGTGCGT 57.857 40.909 23.95 0.87 32.50 5.24
519 520 4.517285 AGTATTGATCAATCTGGTGCGTT 58.483 39.130 23.95 0.11 32.50 4.84
520 521 3.770263 ATTGATCAATCTGGTGCGTTG 57.230 42.857 15.36 0.00 0.00 4.10
521 522 1.452110 TGATCAATCTGGTGCGTTGG 58.548 50.000 0.00 0.00 0.00 3.77
522 523 1.271325 TGATCAATCTGGTGCGTTGGT 60.271 47.619 0.00 0.00 0.00 3.67
523 524 1.398390 GATCAATCTGGTGCGTTGGTC 59.602 52.381 0.00 0.00 0.00 4.02
524 525 0.605319 TCAATCTGGTGCGTTGGTCC 60.605 55.000 0.00 0.00 0.00 4.46
525 526 0.888736 CAATCTGGTGCGTTGGTCCA 60.889 55.000 0.00 0.00 0.00 4.02
526 527 0.889186 AATCTGGTGCGTTGGTCCAC 60.889 55.000 0.00 0.00 0.00 4.02
527 528 1.768684 ATCTGGTGCGTTGGTCCACT 61.769 55.000 0.00 0.00 32.68 4.00
528 529 1.116536 TCTGGTGCGTTGGTCCACTA 61.117 55.000 0.00 0.00 32.68 2.74
529 530 0.250124 CTGGTGCGTTGGTCCACTAA 60.250 55.000 0.00 0.00 32.68 2.24
530 531 0.180642 TGGTGCGTTGGTCCACTAAA 59.819 50.000 0.00 0.00 32.68 1.85
531 532 0.872388 GGTGCGTTGGTCCACTAAAG 59.128 55.000 0.00 0.00 32.68 1.85
532 533 1.589803 GTGCGTTGGTCCACTAAAGT 58.410 50.000 0.00 0.00 0.00 2.66
533 534 1.263217 GTGCGTTGGTCCACTAAAGTG 59.737 52.381 3.02 3.02 45.23 3.16
542 543 3.976704 CACTAAAGTGGATGGCCCA 57.023 52.632 0.00 0.00 44.25 5.36
555 556 6.505048 TGGATGGCCCATATATCTTAGATG 57.495 41.667 4.78 0.00 40.82 2.90
556 557 5.972502 TGGATGGCCCATATATCTTAGATGT 59.027 40.000 4.78 0.35 40.82 3.06
557 558 7.138934 TGGATGGCCCATATATCTTAGATGTA 58.861 38.462 4.78 2.92 40.82 2.29
558 559 7.071196 TGGATGGCCCATATATCTTAGATGTAC 59.929 40.741 4.78 0.00 40.82 2.90
559 560 7.291182 GGATGGCCCATATATCTTAGATGTACT 59.709 40.741 4.78 0.00 34.14 2.73
560 561 7.423844 TGGCCCATATATCTTAGATGTACTG 57.576 40.000 4.78 3.90 0.00 2.74
561 562 6.959954 TGGCCCATATATCTTAGATGTACTGT 59.040 38.462 4.78 0.00 0.00 3.55
562 563 8.119891 TGGCCCATATATCTTAGATGTACTGTA 58.880 37.037 4.78 0.00 0.00 2.74
563 564 8.978472 GGCCCATATATCTTAGATGTACTGTAA 58.022 37.037 4.78 0.00 0.00 2.41
572 573 8.880991 TCTTAGATGTACTGTAAAAGGTCTCT 57.119 34.615 0.00 0.00 0.00 3.10
573 574 9.310449 TCTTAGATGTACTGTAAAAGGTCTCTT 57.690 33.333 0.00 0.00 34.07 2.85
583 584 9.945904 ACTGTAAAAGGTCTCTTATTAAAGGAG 57.054 33.333 0.00 0.00 33.22 3.69
584 585 9.384764 CTGTAAAAGGTCTCTTATTAAAGGAGG 57.615 37.037 0.00 0.00 33.22 4.30
585 586 9.108111 TGTAAAAGGTCTCTTATTAAAGGAGGA 57.892 33.333 0.00 0.00 33.22 3.71
586 587 9.602568 GTAAAAGGTCTCTTATTAAAGGAGGAG 57.397 37.037 0.00 0.00 33.22 3.69
587 588 8.450780 AAAAGGTCTCTTATTAAAGGAGGAGA 57.549 34.615 0.00 0.00 33.22 3.71
598 599 9.862149 TTATTAAAGGAGGAGAACCCATATTTC 57.138 33.333 0.00 0.00 37.41 2.17
599 600 5.796502 AAAGGAGGAGAACCCATATTTCA 57.203 39.130 0.00 0.00 37.41 2.69
603 604 5.072872 AGGAGGAGAACCCATATTTCATCAG 59.927 44.000 0.00 0.00 37.41 2.90
608 609 6.408548 GGAGAACCCATATTTCATCAGTCTCA 60.409 42.308 0.00 0.00 34.14 3.27
617 619 8.900781 CATATTTCATCAGTCTCAACAAGGAAT 58.099 33.333 0.00 0.00 0.00 3.01
632 634 8.049117 TCAACAAGGAATTATCTAGCATGTTCT 58.951 33.333 0.00 0.00 0.00 3.01
638 641 8.489489 AGGAATTATCTAGCATGTTCTCTTGAA 58.511 33.333 0.00 0.00 0.00 2.69
639 642 9.282569 GGAATTATCTAGCATGTTCTCTTGAAT 57.717 33.333 0.00 0.00 34.40 2.57
649 652 4.575885 TGTTCTCTTGAATTTACCTCCCG 58.424 43.478 0.00 0.00 34.40 5.14
659 662 0.672401 TTACCTCCCGAAGCTTTGCG 60.672 55.000 8.32 4.32 0.00 4.85
664 667 2.427410 CCGAAGCTTTGCGCACAC 60.427 61.111 11.12 1.61 42.61 3.82
665 668 2.327592 CGAAGCTTTGCGCACACA 59.672 55.556 11.12 0.00 42.61 3.72
692 695 8.446714 AGGGTGAATTCTCTCATATCATATGT 57.553 34.615 9.91 0.00 0.00 2.29
693 696 9.552695 AGGGTGAATTCTCTCATATCATATGTA 57.447 33.333 9.91 0.00 0.00 2.29
707 710 4.191544 TCATATGTAGCCTTCACAACAGC 58.808 43.478 1.90 0.00 0.00 4.40
776 783 0.962356 AACCGGGATGCTGCTTTGAG 60.962 55.000 6.32 0.00 0.00 3.02
796 803 4.405358 TGAGGTGCAAACTTGAAAAAGGAT 59.595 37.500 0.00 0.00 0.00 3.24
903 1235 6.254281 ACACCATTGACTAGTTAACAATGC 57.746 37.500 21.79 0.00 45.08 3.56
946 1281 3.123621 GGTACACGAGCTGATTTCTTGTG 59.876 47.826 0.00 8.40 46.42 3.33
947 1282 3.111853 ACACGAGCTGATTTCTTGTGA 57.888 42.857 15.07 0.00 44.75 3.58
948 1283 2.802816 ACACGAGCTGATTTCTTGTGAC 59.197 45.455 15.07 0.00 44.75 3.67
949 1284 3.062763 CACGAGCTGATTTCTTGTGACT 58.937 45.455 0.00 0.00 44.75 3.41
956 1291 1.734465 GATTTCTTGTGACTCCAGGCG 59.266 52.381 0.00 0.00 0.00 5.52
983 1318 1.708341 AGCACAAGGGCTGACAAAAT 58.292 45.000 0.00 0.00 43.89 1.82
1035 1381 5.385198 TGCTGTTTTAGGAAATCAAGGACT 58.615 37.500 0.00 0.00 0.00 3.85
1172 1524 0.539438 AAGACATGGGCGGCAAAAGA 60.539 50.000 12.47 0.00 0.00 2.52
1311 1663 3.436704 ACATTGGTGCAGAACTGTTATCG 59.563 43.478 3.77 0.00 0.00 2.92
1519 1871 6.183360 GGATCCAGCTATACTTATATCGCCAA 60.183 42.308 6.95 0.00 31.34 4.52
1524 1876 6.649141 CAGCTATACTTATATCGCCAAAACCA 59.351 38.462 0.00 0.00 31.34 3.67
1834 2189 3.265791 GACGATGAAGCAATTCCTGTCT 58.734 45.455 0.00 0.00 0.00 3.41
1904 2265 6.432783 GCTAGAGATTCTCATGAGGCTAACTA 59.567 42.308 22.42 17.25 32.06 2.24
2049 2410 1.999648 ATGTGGAGCAGCCTGAAAAA 58.000 45.000 0.00 0.00 37.63 1.94
2053 2414 2.164422 GTGGAGCAGCCTGAAAAATACC 59.836 50.000 0.00 0.00 37.63 2.73
2054 2415 1.751351 GGAGCAGCCTGAAAAATACCC 59.249 52.381 0.00 0.00 0.00 3.69
2055 2416 1.751351 GAGCAGCCTGAAAAATACCCC 59.249 52.381 0.00 0.00 0.00 4.95
2056 2417 1.077005 AGCAGCCTGAAAAATACCCCA 59.923 47.619 0.00 0.00 0.00 4.96
2094 2455 6.959639 TTTGAGTATCTTCTTGCCAAGTTT 57.040 33.333 4.04 0.00 34.92 2.66
2148 2509 1.869690 GGAAGAACTCCGTGCAAGC 59.130 57.895 0.00 0.00 33.37 4.01
2210 2571 1.884235 GGGAACCGCCATATGAGAAG 58.116 55.000 3.65 0.00 40.86 2.85
2235 2596 1.199097 TCGGAAGAATTCTTTTGCCGC 59.801 47.619 28.86 14.77 46.56 6.53
2282 2643 3.999663 CTGTCCTTCACTCCAATCAGAAC 59.000 47.826 0.00 0.00 0.00 3.01
2556 2917 1.066605 CTGCTACAAGATTGCCCATGC 59.933 52.381 0.00 0.00 38.26 4.06
2564 2925 1.188863 GATTGCCCATGCCTCAAGTT 58.811 50.000 0.00 0.00 36.33 2.66
2649 3010 2.167487 TGGAGTTTCAAAAACAGGTGCC 59.833 45.455 5.46 0.00 0.00 5.01
2661 3022 0.389948 CAGGTGCCGTCAGTAACCTC 60.390 60.000 0.00 0.00 41.14 3.85
2670 3031 3.552875 CGTCAGTAACCTCCAGATAGGA 58.447 50.000 0.00 0.00 46.75 2.94
2684 3045 6.553857 TCCAGATAGGAGTAAGTAAGGATCC 58.446 44.000 2.48 2.48 43.07 3.36
2696 3057 1.295020 AAGGATCCGGTGGATTGGAA 58.705 50.000 5.98 0.00 43.27 3.53
2724 3085 4.555709 TGGTTGCCGCGTGGACTT 62.556 61.111 21.76 0.00 37.49 3.01
2800 3162 7.177744 ACCAGGACGGAAAAACATACATTTATT 59.822 33.333 0.00 0.00 38.63 1.40
2819 3181 0.884704 TCAAGTCAGGCCAACTTCGC 60.885 55.000 17.92 0.00 34.79 4.70
2830 3192 2.213499 CCAACTTCGCTCAGTCTTTGT 58.787 47.619 0.00 0.00 0.00 2.83
2831 3193 2.221981 CCAACTTCGCTCAGTCTTTGTC 59.778 50.000 0.00 0.00 0.00 3.18
2832 3194 3.126831 CAACTTCGCTCAGTCTTTGTCT 58.873 45.455 0.00 0.00 0.00 3.41
2833 3195 3.460857 ACTTCGCTCAGTCTTTGTCTT 57.539 42.857 0.00 0.00 0.00 3.01
2834 3196 3.798202 ACTTCGCTCAGTCTTTGTCTTT 58.202 40.909 0.00 0.00 0.00 2.52
2835 3197 3.557595 ACTTCGCTCAGTCTTTGTCTTTG 59.442 43.478 0.00 0.00 0.00 2.77
2836 3198 2.483876 TCGCTCAGTCTTTGTCTTTGG 58.516 47.619 0.00 0.00 0.00 3.28
2837 3199 2.102420 TCGCTCAGTCTTTGTCTTTGGA 59.898 45.455 0.00 0.00 0.00 3.53
2838 3200 2.221981 CGCTCAGTCTTTGTCTTTGGAC 59.778 50.000 0.00 0.00 42.42 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.592993 CCACGGACCACACCTCCAT 61.593 63.158 0.00 0.00 0.00 3.41
1 2 3.238497 CCACGGACCACACCTCCA 61.238 66.667 0.00 0.00 0.00 3.86
2 3 4.699522 GCCACGGACCACACCTCC 62.700 72.222 0.00 0.00 0.00 4.30
3 4 4.699522 GGCCACGGACCACACCTC 62.700 72.222 0.00 0.00 0.00 3.85
20 21 2.587322 TAAATCGCACGGAGCCCCAG 62.587 60.000 0.00 0.00 41.38 4.45
21 22 2.587322 CTAAATCGCACGGAGCCCCA 62.587 60.000 0.00 0.00 41.38 4.96
22 23 1.887707 CTAAATCGCACGGAGCCCC 60.888 63.158 0.00 0.00 41.38 5.80
23 24 0.876342 CTCTAAATCGCACGGAGCCC 60.876 60.000 0.00 0.00 41.38 5.19
24 25 0.102481 TCTCTAAATCGCACGGAGCC 59.898 55.000 0.00 0.00 41.38 4.70
25 26 1.482278 CTCTCTAAATCGCACGGAGC 58.518 55.000 0.00 0.00 40.87 4.70
26 27 1.202302 TGCTCTCTAAATCGCACGGAG 60.202 52.381 0.00 0.00 0.00 4.63
27 28 0.815095 TGCTCTCTAAATCGCACGGA 59.185 50.000 0.00 0.00 0.00 4.69
28 29 1.203928 CTGCTCTCTAAATCGCACGG 58.796 55.000 0.00 0.00 0.00 4.94
29 30 1.914634 ACTGCTCTCTAAATCGCACG 58.085 50.000 0.00 0.00 0.00 5.34
30 31 2.605366 GGAACTGCTCTCTAAATCGCAC 59.395 50.000 0.00 0.00 0.00 5.34
31 32 2.497675 AGGAACTGCTCTCTAAATCGCA 59.502 45.455 0.00 0.00 37.18 5.10
32 33 3.172229 AGGAACTGCTCTCTAAATCGC 57.828 47.619 0.00 0.00 37.18 4.58
33 34 4.283678 CGTAGGAACTGCTCTCTAAATCG 58.716 47.826 0.00 0.00 41.52 3.34
34 35 4.045783 GCGTAGGAACTGCTCTCTAAATC 58.954 47.826 0.00 0.00 41.52 2.17
35 36 3.489398 CGCGTAGGAACTGCTCTCTAAAT 60.489 47.826 0.00 0.00 41.52 1.40
36 37 2.159421 CGCGTAGGAACTGCTCTCTAAA 60.159 50.000 0.00 0.00 41.52 1.85
37 38 1.400846 CGCGTAGGAACTGCTCTCTAA 59.599 52.381 0.00 0.00 41.52 2.10
38 39 1.015109 CGCGTAGGAACTGCTCTCTA 58.985 55.000 0.00 0.00 41.52 2.43
39 40 0.961358 ACGCGTAGGAACTGCTCTCT 60.961 55.000 11.67 0.00 41.52 3.10
40 41 0.523757 GACGCGTAGGAACTGCTCTC 60.524 60.000 13.97 0.00 41.52 3.20
41 42 0.961358 AGACGCGTAGGAACTGCTCT 60.961 55.000 13.97 0.00 41.52 4.09
42 43 0.798771 CAGACGCGTAGGAACTGCTC 60.799 60.000 13.97 0.00 41.52 4.26
43 44 1.213013 CAGACGCGTAGGAACTGCT 59.787 57.895 13.97 0.00 41.52 4.24
44 45 0.798771 CTCAGACGCGTAGGAACTGC 60.799 60.000 13.97 0.00 41.52 4.40
45 46 0.522180 ACTCAGACGCGTAGGAACTG 59.478 55.000 13.97 15.49 41.52 3.16
46 47 2.008329 CTACTCAGACGCGTAGGAACT 58.992 52.381 13.97 0.32 46.37 3.01
47 48 2.005451 TCTACTCAGACGCGTAGGAAC 58.995 52.381 13.97 0.00 35.10 3.62
48 49 2.391616 TCTACTCAGACGCGTAGGAA 57.608 50.000 13.97 0.00 35.10 3.36
49 50 2.481854 GATCTACTCAGACGCGTAGGA 58.518 52.381 13.97 12.28 35.10 2.94
50 51 1.192757 CGATCTACTCAGACGCGTAGG 59.807 57.143 13.97 7.66 35.10 3.18
51 52 1.397441 GCGATCTACTCAGACGCGTAG 60.397 57.143 13.97 9.23 39.60 3.51
52 53 0.580578 GCGATCTACTCAGACGCGTA 59.419 55.000 13.97 0.00 39.60 4.42
53 54 1.352404 GCGATCTACTCAGACGCGT 59.648 57.895 13.85 13.85 39.60 6.01
54 55 1.369448 GGCGATCTACTCAGACGCG 60.369 63.158 3.53 3.53 44.78 6.01
55 56 1.369448 CGGCGATCTACTCAGACGC 60.369 63.158 0.00 0.00 43.95 5.19
56 57 1.369448 GCGGCGATCTACTCAGACG 60.369 63.158 12.98 0.00 32.25 4.18
57 58 1.008309 GGCGGCGATCTACTCAGAC 60.008 63.158 12.98 0.00 32.25 3.51
58 59 2.543802 CGGCGGCGATCTACTCAGA 61.544 63.158 29.19 0.00 34.56 3.27
59 60 2.050895 CGGCGGCGATCTACTCAG 60.051 66.667 29.19 0.00 0.00 3.35
60 61 2.116533 TTCGGCGGCGATCTACTCA 61.117 57.895 35.04 15.57 0.00 3.41
61 62 1.657794 GTTCGGCGGCGATCTACTC 60.658 63.158 35.04 16.24 0.00 2.59
62 63 2.412112 GTTCGGCGGCGATCTACT 59.588 61.111 35.04 0.00 0.00 2.57
63 64 3.022914 CGTTCGGCGGCGATCTAC 61.023 66.667 35.04 27.06 36.85 2.59
100 101 1.583967 CAGCCTTAGCGAGACGACG 60.584 63.158 0.00 0.00 46.67 5.12
101 102 1.226717 CCAGCCTTAGCGAGACGAC 60.227 63.158 0.00 0.00 46.67 4.34
102 103 1.654954 GACCAGCCTTAGCGAGACGA 61.655 60.000 0.00 0.00 46.67 4.20
103 104 1.226717 GACCAGCCTTAGCGAGACG 60.227 63.158 0.00 0.00 46.67 4.18
104 105 0.461961 ATGACCAGCCTTAGCGAGAC 59.538 55.000 0.00 0.00 46.67 3.36
105 106 1.957177 CTATGACCAGCCTTAGCGAGA 59.043 52.381 0.00 0.00 46.67 4.04
106 107 1.683917 ACTATGACCAGCCTTAGCGAG 59.316 52.381 0.00 0.00 46.67 5.03
107 108 1.409064 CACTATGACCAGCCTTAGCGA 59.591 52.381 0.00 0.00 46.67 4.93
108 109 1.539065 CCACTATGACCAGCCTTAGCG 60.539 57.143 0.00 0.00 46.67 4.26
109 110 1.202698 CCCACTATGACCAGCCTTAGC 60.203 57.143 0.00 0.00 40.32 3.09
110 111 2.366916 CTCCCACTATGACCAGCCTTAG 59.633 54.545 0.00 0.00 0.00 2.18
111 112 2.292918 ACTCCCACTATGACCAGCCTTA 60.293 50.000 0.00 0.00 0.00 2.69
112 113 1.207791 CTCCCACTATGACCAGCCTT 58.792 55.000 0.00 0.00 0.00 4.35
113 114 0.043334 ACTCCCACTATGACCAGCCT 59.957 55.000 0.00 0.00 0.00 4.58
114 115 1.789523 TACTCCCACTATGACCAGCC 58.210 55.000 0.00 0.00 0.00 4.85
115 116 2.500098 TGTTACTCCCACTATGACCAGC 59.500 50.000 0.00 0.00 0.00 4.85
116 117 5.011125 CCTATGTTACTCCCACTATGACCAG 59.989 48.000 0.00 0.00 0.00 4.00
117 118 4.899457 CCTATGTTACTCCCACTATGACCA 59.101 45.833 0.00 0.00 0.00 4.02
118 119 4.900054 ACCTATGTTACTCCCACTATGACC 59.100 45.833 0.00 0.00 0.00 4.02
119 120 6.776603 ACTACCTATGTTACTCCCACTATGAC 59.223 42.308 0.00 0.00 0.00 3.06
120 121 6.919158 ACTACCTATGTTACTCCCACTATGA 58.081 40.000 0.00 0.00 0.00 2.15
121 122 8.574737 GTTACTACCTATGTTACTCCCACTATG 58.425 40.741 0.00 0.00 0.00 2.23
122 123 8.284435 TGTTACTACCTATGTTACTCCCACTAT 58.716 37.037 0.00 0.00 0.00 2.12
123 124 7.642186 TGTTACTACCTATGTTACTCCCACTA 58.358 38.462 0.00 0.00 0.00 2.74
124 125 6.496743 TGTTACTACCTATGTTACTCCCACT 58.503 40.000 0.00 0.00 0.00 4.00
125 126 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
126 127 8.505246 TCTATGTTACTACCTATGTTACTCCCA 58.495 37.037 0.00 0.00 0.00 4.37
127 128 8.930846 TCTATGTTACTACCTATGTTACTCCC 57.069 38.462 0.00 0.00 0.00 4.30
129 130 9.843334 GCATCTATGTTACTACCTATGTTACTC 57.157 37.037 0.00 0.00 0.00 2.59
130 131 8.804204 GGCATCTATGTTACTACCTATGTTACT 58.196 37.037 0.00 0.00 0.00 2.24
131 132 8.582437 TGGCATCTATGTTACTACCTATGTTAC 58.418 37.037 0.00 0.00 0.00 2.50
132 133 8.582437 GTGGCATCTATGTTACTACCTATGTTA 58.418 37.037 0.00 0.00 0.00 2.41
133 134 7.070696 TGTGGCATCTATGTTACTACCTATGTT 59.929 37.037 0.00 0.00 0.00 2.71
134 135 6.553476 TGTGGCATCTATGTTACTACCTATGT 59.447 38.462 0.00 0.00 0.00 2.29
135 136 6.993079 TGTGGCATCTATGTTACTACCTATG 58.007 40.000 0.00 0.00 0.00 2.23
136 137 7.798710 ATGTGGCATCTATGTTACTACCTAT 57.201 36.000 0.00 0.00 0.00 2.57
137 138 8.715190 TTATGTGGCATCTATGTTACTACCTA 57.285 34.615 0.00 0.00 0.00 3.08
138 139 7.612065 TTATGTGGCATCTATGTTACTACCT 57.388 36.000 0.00 0.00 0.00 3.08
139 140 6.369065 GCTTATGTGGCATCTATGTTACTACC 59.631 42.308 0.00 0.00 0.00 3.18
140 141 6.929049 TGCTTATGTGGCATCTATGTTACTAC 59.071 38.462 0.00 0.00 34.56 2.73
141 142 7.061566 TGCTTATGTGGCATCTATGTTACTA 57.938 36.000 0.00 0.00 34.56 1.82
142 143 5.928976 TGCTTATGTGGCATCTATGTTACT 58.071 37.500 0.00 0.00 34.56 2.24
143 144 6.618287 TTGCTTATGTGGCATCTATGTTAC 57.382 37.500 0.00 0.00 39.54 2.50
144 145 7.637631 TTTTGCTTATGTGGCATCTATGTTA 57.362 32.000 0.00 0.00 39.54 2.41
145 146 6.528537 TTTTGCTTATGTGGCATCTATGTT 57.471 33.333 0.00 0.00 39.54 2.71
146 147 6.528537 TTTTTGCTTATGTGGCATCTATGT 57.471 33.333 0.00 0.00 39.54 2.29
147 148 6.422701 CCATTTTTGCTTATGTGGCATCTATG 59.577 38.462 0.00 0.00 39.54 2.23
148 149 6.098695 ACCATTTTTGCTTATGTGGCATCTAT 59.901 34.615 0.00 0.00 39.54 1.98
149 150 5.421693 ACCATTTTTGCTTATGTGGCATCTA 59.578 36.000 0.00 0.00 39.54 1.98
150 151 4.223477 ACCATTTTTGCTTATGTGGCATCT 59.777 37.500 0.00 0.00 39.54 2.90
151 152 4.330620 CACCATTTTTGCTTATGTGGCATC 59.669 41.667 0.00 0.00 39.54 3.91
152 153 4.020396 TCACCATTTTTGCTTATGTGGCAT 60.020 37.500 0.00 0.00 39.54 4.40
153 154 3.323115 TCACCATTTTTGCTTATGTGGCA 59.677 39.130 0.00 0.00 37.97 4.92
154 155 3.924144 TCACCATTTTTGCTTATGTGGC 58.076 40.909 0.00 0.00 0.00 5.01
155 156 5.349270 CACATCACCATTTTTGCTTATGTGG 59.651 40.000 0.00 0.00 39.34 4.17
156 157 5.349270 CCACATCACCATTTTTGCTTATGTG 59.651 40.000 0.00 0.00 41.50 3.21
157 158 5.481105 CCACATCACCATTTTTGCTTATGT 58.519 37.500 0.00 0.00 0.00 2.29
158 159 4.330620 GCCACATCACCATTTTTGCTTATG 59.669 41.667 0.00 0.00 0.00 1.90
159 160 4.020396 TGCCACATCACCATTTTTGCTTAT 60.020 37.500 0.00 0.00 0.00 1.73
160 161 3.323115 TGCCACATCACCATTTTTGCTTA 59.677 39.130 0.00 0.00 0.00 3.09
161 162 2.104451 TGCCACATCACCATTTTTGCTT 59.896 40.909 0.00 0.00 0.00 3.91
162 163 1.693062 TGCCACATCACCATTTTTGCT 59.307 42.857 0.00 0.00 0.00 3.91
163 164 2.166821 TGCCACATCACCATTTTTGC 57.833 45.000 0.00 0.00 0.00 3.68
164 165 3.731089 ACTTGCCACATCACCATTTTTG 58.269 40.909 0.00 0.00 0.00 2.44
165 166 4.588528 ACTACTTGCCACATCACCATTTTT 59.411 37.500 0.00 0.00 0.00 1.94
166 167 4.151883 ACTACTTGCCACATCACCATTTT 58.848 39.130 0.00 0.00 0.00 1.82
167 168 3.766545 ACTACTTGCCACATCACCATTT 58.233 40.909 0.00 0.00 0.00 2.32
168 169 3.439857 ACTACTTGCCACATCACCATT 57.560 42.857 0.00 0.00 0.00 3.16
169 170 3.439857 AACTACTTGCCACATCACCAT 57.560 42.857 0.00 0.00 0.00 3.55
170 171 2.949177 AACTACTTGCCACATCACCA 57.051 45.000 0.00 0.00 0.00 4.17
171 172 4.941263 TCATTAACTACTTGCCACATCACC 59.059 41.667 0.00 0.00 0.00 4.02
172 173 5.065218 CCTCATTAACTACTTGCCACATCAC 59.935 44.000 0.00 0.00 0.00 3.06
173 174 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
174 175 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
175 176 5.189736 TCTCCTCATTAACTACTTGCCACAT 59.810 40.000 0.00 0.00 0.00 3.21
176 177 4.530553 TCTCCTCATTAACTACTTGCCACA 59.469 41.667 0.00 0.00 0.00 4.17
177 178 5.086104 TCTCCTCATTAACTACTTGCCAC 57.914 43.478 0.00 0.00 0.00 5.01
178 179 5.023452 TCTCTCCTCATTAACTACTTGCCA 58.977 41.667 0.00 0.00 0.00 4.92
179 180 5.452636 CCTCTCTCCTCATTAACTACTTGCC 60.453 48.000 0.00 0.00 0.00 4.52
180 181 5.596845 CCTCTCTCCTCATTAACTACTTGC 58.403 45.833 0.00 0.00 0.00 4.01
181 182 5.127845 TGCCTCTCTCCTCATTAACTACTTG 59.872 44.000 0.00 0.00 0.00 3.16
182 183 5.273208 TGCCTCTCTCCTCATTAACTACTT 58.727 41.667 0.00 0.00 0.00 2.24
183 184 4.873010 TGCCTCTCTCCTCATTAACTACT 58.127 43.478 0.00 0.00 0.00 2.57
184 185 5.599999 TTGCCTCTCTCCTCATTAACTAC 57.400 43.478 0.00 0.00 0.00 2.73
185 186 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
186 187 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
187 188 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
188 189 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
189 190 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
190 191 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
191 192 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
192 193 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
193 194 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
194 195 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
195 196 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
224 225 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
225 226 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
226 227 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
227 228 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
228 229 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
229 230 3.793129 GCATTGGAAACCGCTATGTGATG 60.793 47.826 0.00 0.00 0.00 3.07
230 231 2.358898 GCATTGGAAACCGCTATGTGAT 59.641 45.455 0.00 0.00 0.00 3.06
231 232 1.742831 GCATTGGAAACCGCTATGTGA 59.257 47.619 0.00 0.00 0.00 3.58
232 233 1.472082 TGCATTGGAAACCGCTATGTG 59.528 47.619 0.00 0.00 0.00 3.21
233 234 1.832883 TGCATTGGAAACCGCTATGT 58.167 45.000 0.00 0.00 0.00 2.29
234 235 4.566545 TTATGCATTGGAAACCGCTATG 57.433 40.909 3.54 0.00 0.00 2.23
235 236 4.826733 TCATTATGCATTGGAAACCGCTAT 59.173 37.500 3.54 0.00 0.00 2.97
236 237 4.203226 TCATTATGCATTGGAAACCGCTA 58.797 39.130 3.54 0.00 0.00 4.26
237 238 3.023119 TCATTATGCATTGGAAACCGCT 58.977 40.909 3.54 0.00 0.00 5.52
238 239 3.181487 ACTCATTATGCATTGGAAACCGC 60.181 43.478 3.54 0.00 0.00 5.68
239 240 4.336433 AGACTCATTATGCATTGGAAACCG 59.664 41.667 3.54 0.00 0.00 4.44
240 241 5.841957 AGACTCATTATGCATTGGAAACC 57.158 39.130 3.54 0.00 0.00 3.27
241 242 7.320443 TGTAGACTCATTATGCATTGGAAAC 57.680 36.000 3.54 0.00 0.00 2.78
242 243 7.936496 TTGTAGACTCATTATGCATTGGAAA 57.064 32.000 3.54 0.00 0.00 3.13
243 244 7.611467 ACTTTGTAGACTCATTATGCATTGGAA 59.389 33.333 3.54 0.00 0.00 3.53
244 245 7.112122 ACTTTGTAGACTCATTATGCATTGGA 58.888 34.615 3.54 0.00 0.00 3.53
245 246 7.325660 ACTTTGTAGACTCATTATGCATTGG 57.674 36.000 3.54 0.00 0.00 3.16
256 257 9.162764 GCCTTCATTTATTACTTTGTAGACTCA 57.837 33.333 0.00 0.00 0.00 3.41
257 258 9.162764 TGCCTTCATTTATTACTTTGTAGACTC 57.837 33.333 0.00 0.00 0.00 3.36
258 259 9.515226 TTGCCTTCATTTATTACTTTGTAGACT 57.485 29.630 0.00 0.00 0.00 3.24
259 260 9.556030 GTTGCCTTCATTTATTACTTTGTAGAC 57.444 33.333 0.00 0.00 0.00 2.59
260 261 9.515226 AGTTGCCTTCATTTATTACTTTGTAGA 57.485 29.630 0.00 0.00 0.00 2.59
268 269 9.946165 GGTAACATAGTTGCCTTCATTTATTAC 57.054 33.333 9.36 0.00 0.00 1.89
269 270 9.688091 TGGTAACATAGTTGCCTTCATTTATTA 57.312 29.630 16.08 0.00 46.17 0.98
270 271 8.588290 TGGTAACATAGTTGCCTTCATTTATT 57.412 30.769 16.08 0.00 46.17 1.40
289 290 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
290 291 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
291 292 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
292 293 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
293 294 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
294 295 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
295 296 3.185880 AGTGGGTAGTGTCATAGGTGT 57.814 47.619 0.00 0.00 0.00 4.16
296 297 4.893524 TCATAGTGGGTAGTGTCATAGGTG 59.106 45.833 0.00 0.00 0.00 4.00
297 298 5.138758 TCATAGTGGGTAGTGTCATAGGT 57.861 43.478 0.00 0.00 0.00 3.08
298 299 5.011125 CCTTCATAGTGGGTAGTGTCATAGG 59.989 48.000 0.00 0.00 0.00 2.57
299 300 5.598830 ACCTTCATAGTGGGTAGTGTCATAG 59.401 44.000 0.00 0.00 0.00 2.23
300 301 5.525484 ACCTTCATAGTGGGTAGTGTCATA 58.475 41.667 0.00 0.00 0.00 2.15
301 302 4.362677 ACCTTCATAGTGGGTAGTGTCAT 58.637 43.478 0.00 0.00 0.00 3.06
302 303 3.786553 ACCTTCATAGTGGGTAGTGTCA 58.213 45.455 0.00 0.00 0.00 3.58
303 304 5.517322 CTACCTTCATAGTGGGTAGTGTC 57.483 47.826 9.46 0.00 44.30 3.67
308 309 9.491406 TTTATGTTACTACCTTCATAGTGGGTA 57.509 33.333 0.00 0.00 36.09 3.69
309 310 7.983166 TTATGTTACTACCTTCATAGTGGGT 57.017 36.000 0.00 0.00 36.09 4.51
310 311 8.483758 AGTTTATGTTACTACCTTCATAGTGGG 58.516 37.037 0.00 0.00 36.09 4.61
346 347 9.401058 GGGAGTAACTTAGACTAGTAACATACA 57.599 37.037 0.00 0.00 0.00 2.29
347 348 8.845227 GGGGAGTAACTTAGACTAGTAACATAC 58.155 40.741 0.00 0.00 0.00 2.39
348 349 8.560039 TGGGGAGTAACTTAGACTAGTAACATA 58.440 37.037 0.00 0.00 0.00 2.29
349 350 7.341512 GTGGGGAGTAACTTAGACTAGTAACAT 59.658 40.741 0.00 0.00 0.00 2.71
350 351 6.660949 GTGGGGAGTAACTTAGACTAGTAACA 59.339 42.308 0.00 0.00 0.00 2.41
351 352 6.889177 AGTGGGGAGTAACTTAGACTAGTAAC 59.111 42.308 0.00 0.00 0.00 2.50
352 353 7.037342 AGTGGGGAGTAACTTAGACTAGTAA 57.963 40.000 0.00 0.00 0.00 2.24
353 354 6.649041 AGTGGGGAGTAACTTAGACTAGTA 57.351 41.667 0.00 0.00 0.00 1.82
354 355 5.533333 AGTGGGGAGTAACTTAGACTAGT 57.467 43.478 0.00 0.00 0.00 2.57
355 356 7.229106 GTCATAGTGGGGAGTAACTTAGACTAG 59.771 44.444 0.00 0.00 31.58 2.57
356 357 7.059156 GTCATAGTGGGGAGTAACTTAGACTA 58.941 42.308 0.00 0.00 31.58 2.59
357 358 5.892686 GTCATAGTGGGGAGTAACTTAGACT 59.107 44.000 0.00 0.00 31.58 3.24
358 359 5.068855 GGTCATAGTGGGGAGTAACTTAGAC 59.931 48.000 0.00 0.00 32.58 2.59
359 360 5.206587 GGTCATAGTGGGGAGTAACTTAGA 58.793 45.833 0.00 0.00 0.00 2.10
360 361 4.960469 TGGTCATAGTGGGGAGTAACTTAG 59.040 45.833 0.00 0.00 0.00 2.18
361 362 4.950361 TGGTCATAGTGGGGAGTAACTTA 58.050 43.478 0.00 0.00 0.00 2.24
362 363 3.775316 CTGGTCATAGTGGGGAGTAACTT 59.225 47.826 0.00 0.00 0.00 2.66
363 364 3.375699 CTGGTCATAGTGGGGAGTAACT 58.624 50.000 0.00 0.00 0.00 2.24
364 365 2.158943 GCTGGTCATAGTGGGGAGTAAC 60.159 54.545 0.00 0.00 0.00 2.50
365 366 2.116238 GCTGGTCATAGTGGGGAGTAA 58.884 52.381 0.00 0.00 0.00 2.24
366 367 1.691482 GGCTGGTCATAGTGGGGAGTA 60.691 57.143 0.00 0.00 0.00 2.59
367 368 0.983378 GGCTGGTCATAGTGGGGAGT 60.983 60.000 0.00 0.00 0.00 3.85
368 369 0.692419 AGGCTGGTCATAGTGGGGAG 60.692 60.000 0.00 0.00 0.00 4.30
369 370 0.639943 TAGGCTGGTCATAGTGGGGA 59.360 55.000 0.00 0.00 0.00 4.81
370 371 1.417890 CTTAGGCTGGTCATAGTGGGG 59.582 57.143 0.00 0.00 0.00 4.96
371 372 1.417890 CCTTAGGCTGGTCATAGTGGG 59.582 57.143 0.00 0.00 0.00 4.61
372 373 2.119495 ACCTTAGGCTGGTCATAGTGG 58.881 52.381 0.00 0.00 31.03 4.00
373 374 2.501723 ACACCTTAGGCTGGTCATAGTG 59.498 50.000 0.00 0.00 35.28 2.74
374 375 2.501723 CACACCTTAGGCTGGTCATAGT 59.498 50.000 0.00 0.00 35.28 2.12
375 376 2.743183 GCACACCTTAGGCTGGTCATAG 60.743 54.545 0.00 0.00 35.28 2.23
376 377 1.209504 GCACACCTTAGGCTGGTCATA 59.790 52.381 0.00 0.00 35.28 2.15
377 378 0.035056 GCACACCTTAGGCTGGTCAT 60.035 55.000 0.00 0.00 35.28 3.06
378 379 1.374947 GCACACCTTAGGCTGGTCA 59.625 57.895 0.00 0.00 35.28 4.02
379 380 1.377333 GGCACACCTTAGGCTGGTC 60.377 63.158 0.00 0.00 35.28 4.02
380 381 2.757077 GGCACACCTTAGGCTGGT 59.243 61.111 0.00 0.00 38.53 4.00
390 391 0.168128 GTTATTGACGCAGGCACACC 59.832 55.000 0.00 0.00 0.00 4.16
391 392 0.168128 GGTTATTGACGCAGGCACAC 59.832 55.000 0.00 0.00 0.00 3.82
392 393 0.036164 AGGTTATTGACGCAGGCACA 59.964 50.000 0.00 0.00 0.00 4.57
393 394 0.727398 GAGGTTATTGACGCAGGCAC 59.273 55.000 0.00 0.00 0.00 5.01
394 395 0.739462 CGAGGTTATTGACGCAGGCA 60.739 55.000 0.00 0.00 0.00 4.75
395 396 1.429148 CCGAGGTTATTGACGCAGGC 61.429 60.000 0.00 0.00 0.00 4.85
396 397 1.429148 GCCGAGGTTATTGACGCAGG 61.429 60.000 0.00 0.00 0.00 4.85
397 398 1.752501 CGCCGAGGTTATTGACGCAG 61.753 60.000 0.00 0.00 0.00 5.18
398 399 1.807981 CGCCGAGGTTATTGACGCA 60.808 57.895 0.00 0.00 0.00 5.24
399 400 1.808390 ACGCCGAGGTTATTGACGC 60.808 57.895 0.00 0.00 0.00 5.19
400 401 0.734942 ACACGCCGAGGTTATTGACG 60.735 55.000 0.00 0.00 0.00 4.35
401 402 0.997196 GACACGCCGAGGTTATTGAC 59.003 55.000 0.00 0.00 0.00 3.18
402 403 0.108520 GGACACGCCGAGGTTATTGA 60.109 55.000 0.00 0.00 0.00 2.57
403 404 0.108329 AGGACACGCCGAGGTTATTG 60.108 55.000 0.00 0.00 43.43 1.90
404 405 0.175073 GAGGACACGCCGAGGTTATT 59.825 55.000 0.00 0.00 43.43 1.40
405 406 1.814527 GAGGACACGCCGAGGTTAT 59.185 57.895 0.00 0.00 43.43 1.89
406 407 2.693762 CGAGGACACGCCGAGGTTA 61.694 63.158 0.00 0.00 43.43 2.85
407 408 4.052229 CGAGGACACGCCGAGGTT 62.052 66.667 0.00 0.00 43.43 3.50
415 416 4.135153 CAGCTCCCCGAGGACACG 62.135 72.222 0.00 0.00 37.19 4.49
416 417 2.680352 TCAGCTCCCCGAGGACAC 60.680 66.667 0.00 0.00 37.19 3.67
417 418 2.363018 CTCAGCTCCCCGAGGACA 60.363 66.667 0.00 0.00 37.19 4.02
418 419 1.545706 AAACTCAGCTCCCCGAGGAC 61.546 60.000 4.05 0.00 37.19 3.85
419 420 1.229209 AAACTCAGCTCCCCGAGGA 60.229 57.895 4.05 0.00 41.08 3.71
420 421 1.078848 CAAACTCAGCTCCCCGAGG 60.079 63.158 4.05 0.00 33.36 4.63
421 422 0.539051 ATCAAACTCAGCTCCCCGAG 59.461 55.000 0.00 0.00 35.30 4.63
422 423 0.984230 AATCAAACTCAGCTCCCCGA 59.016 50.000 0.00 0.00 0.00 5.14
423 424 1.470098 CAAATCAAACTCAGCTCCCCG 59.530 52.381 0.00 0.00 0.00 5.73
424 425 2.229784 CACAAATCAAACTCAGCTCCCC 59.770 50.000 0.00 0.00 0.00 4.81
425 426 3.149196 TCACAAATCAAACTCAGCTCCC 58.851 45.455 0.00 0.00 0.00 4.30
426 427 4.276926 AGTTCACAAATCAAACTCAGCTCC 59.723 41.667 0.00 0.00 0.00 4.70
427 428 5.429957 AGTTCACAAATCAAACTCAGCTC 57.570 39.130 0.00 0.00 0.00 4.09
428 429 5.239525 GGTAGTTCACAAATCAAACTCAGCT 59.760 40.000 0.00 0.00 35.08 4.24
429 430 5.452777 GGTAGTTCACAAATCAAACTCAGC 58.547 41.667 0.00 0.00 35.08 4.26
430 431 5.530915 TGGGTAGTTCACAAATCAAACTCAG 59.469 40.000 0.00 0.00 35.08 3.35
431 432 5.441500 TGGGTAGTTCACAAATCAAACTCA 58.558 37.500 0.00 0.00 35.08 3.41
432 433 6.385649 TTGGGTAGTTCACAAATCAAACTC 57.614 37.500 0.00 0.00 36.41 3.01
433 434 6.783708 TTTGGGTAGTTCACAAATCAAACT 57.216 33.333 0.00 0.00 43.47 2.66
434 435 8.974408 GTATTTTGGGTAGTTCACAAATCAAAC 58.026 33.333 0.00 0.00 46.88 2.93
435 436 8.145122 GGTATTTTGGGTAGTTCACAAATCAAA 58.855 33.333 0.00 0.00 46.88 2.69
436 437 7.256012 GGGTATTTTGGGTAGTTCACAAATCAA 60.256 37.037 0.00 0.00 46.88 2.57
437 438 6.209788 GGGTATTTTGGGTAGTTCACAAATCA 59.790 38.462 0.00 0.00 46.88 2.57
438 439 6.436218 AGGGTATTTTGGGTAGTTCACAAATC 59.564 38.462 0.00 0.00 46.88 2.17
439 440 6.319715 AGGGTATTTTGGGTAGTTCACAAAT 58.680 36.000 0.00 0.00 46.88 2.32
440 441 5.707495 AGGGTATTTTGGGTAGTTCACAAA 58.293 37.500 0.00 0.00 46.17 2.83
441 442 5.327737 AGGGTATTTTGGGTAGTTCACAA 57.672 39.130 0.00 0.00 37.71 3.33
442 443 5.327737 AAGGGTATTTTGGGTAGTTCACA 57.672 39.130 0.00 0.00 0.00 3.58
443 444 7.629866 GCATTAAGGGTATTTTGGGTAGTTCAC 60.630 40.741 0.00 0.00 0.00 3.18
444 445 6.378848 GCATTAAGGGTATTTTGGGTAGTTCA 59.621 38.462 0.00 0.00 0.00 3.18
445 446 6.183360 GGCATTAAGGGTATTTTGGGTAGTTC 60.183 42.308 0.00 0.00 0.00 3.01
446 447 5.659525 GGCATTAAGGGTATTTTGGGTAGTT 59.340 40.000 0.00 0.00 0.00 2.24
447 448 5.043657 AGGCATTAAGGGTATTTTGGGTAGT 60.044 40.000 0.00 0.00 0.00 2.73
448 449 5.454966 AGGCATTAAGGGTATTTTGGGTAG 58.545 41.667 0.00 0.00 0.00 3.18
449 450 5.475398 AGGCATTAAGGGTATTTTGGGTA 57.525 39.130 0.00 0.00 0.00 3.69
450 451 4.346478 AGGCATTAAGGGTATTTTGGGT 57.654 40.909 0.00 0.00 0.00 4.51
451 452 6.800072 TTAAGGCATTAAGGGTATTTTGGG 57.200 37.500 0.00 0.00 0.00 4.12
456 457 9.462606 GCAGTATATTAAGGCATTAAGGGTATT 57.537 33.333 9.65 0.00 34.44 1.89
457 458 8.611257 TGCAGTATATTAAGGCATTAAGGGTAT 58.389 33.333 9.65 5.42 34.44 2.73
458 459 7.881232 GTGCAGTATATTAAGGCATTAAGGGTA 59.119 37.037 9.65 0.00 36.79 3.69
459 460 6.715264 GTGCAGTATATTAAGGCATTAAGGGT 59.285 38.462 9.65 0.98 36.79 4.34
460 461 6.714810 TGTGCAGTATATTAAGGCATTAAGGG 59.285 38.462 9.65 0.00 36.79 3.95
461 462 7.744087 TGTGCAGTATATTAAGGCATTAAGG 57.256 36.000 9.65 0.00 36.79 2.69
464 465 9.964303 CAATTTGTGCAGTATATTAAGGCATTA 57.036 29.630 0.00 0.00 36.79 1.90
465 466 8.477256 ACAATTTGTGCAGTATATTAAGGCATT 58.523 29.630 0.15 0.00 36.79 3.56
466 467 7.922278 CACAATTTGTGCAGTATATTAAGGCAT 59.078 33.333 16.05 0.00 41.89 4.40
467 468 7.257003 CACAATTTGTGCAGTATATTAAGGCA 58.743 34.615 16.05 0.00 41.89 4.75
468 469 7.684062 CACAATTTGTGCAGTATATTAAGGC 57.316 36.000 16.05 0.00 41.89 4.35
483 484 5.645929 TGATCAATACTACCGCACAATTTGT 59.354 36.000 0.00 0.00 0.00 2.83
484 485 6.117911 TGATCAATACTACCGCACAATTTG 57.882 37.500 0.00 0.00 0.00 2.32
485 486 6.751514 TTGATCAATACTACCGCACAATTT 57.248 33.333 3.38 0.00 0.00 1.82
486 487 6.767902 AGATTGATCAATACTACCGCACAATT 59.232 34.615 20.75 0.00 0.00 2.32
487 488 6.203530 CAGATTGATCAATACTACCGCACAAT 59.796 38.462 20.75 0.00 0.00 2.71
488 489 5.523552 CAGATTGATCAATACTACCGCACAA 59.476 40.000 20.75 0.00 0.00 3.33
489 490 5.049828 CAGATTGATCAATACTACCGCACA 58.950 41.667 20.75 0.00 0.00 4.57
490 491 4.449068 CCAGATTGATCAATACTACCGCAC 59.551 45.833 20.75 5.50 0.00 5.34
491 492 4.100963 ACCAGATTGATCAATACTACCGCA 59.899 41.667 20.75 0.00 0.00 5.69
492 493 4.449068 CACCAGATTGATCAATACTACCGC 59.551 45.833 20.75 6.90 0.00 5.68
493 494 4.449068 GCACCAGATTGATCAATACTACCG 59.551 45.833 20.75 9.34 0.00 4.02
494 495 4.449068 CGCACCAGATTGATCAATACTACC 59.551 45.833 20.75 8.30 0.00 3.18
495 496 5.050490 ACGCACCAGATTGATCAATACTAC 58.950 41.667 20.75 8.67 0.00 2.73
496 497 5.276461 ACGCACCAGATTGATCAATACTA 57.724 39.130 20.75 0.00 0.00 1.82
497 498 4.142609 ACGCACCAGATTGATCAATACT 57.857 40.909 20.75 15.63 0.00 2.12
498 499 4.496341 CCAACGCACCAGATTGATCAATAC 60.496 45.833 20.75 13.80 0.00 1.89
499 500 3.627123 CCAACGCACCAGATTGATCAATA 59.373 43.478 20.75 0.00 0.00 1.90
500 501 2.424601 CCAACGCACCAGATTGATCAAT 59.575 45.455 20.85 20.85 0.00 2.57
501 502 1.811965 CCAACGCACCAGATTGATCAA 59.188 47.619 11.26 11.26 0.00 2.57
502 503 1.271325 ACCAACGCACCAGATTGATCA 60.271 47.619 0.00 0.00 0.00 2.92
503 504 1.398390 GACCAACGCACCAGATTGATC 59.602 52.381 0.00 0.00 0.00 2.92
504 505 1.453155 GACCAACGCACCAGATTGAT 58.547 50.000 0.00 0.00 0.00 2.57
505 506 0.605319 GGACCAACGCACCAGATTGA 60.605 55.000 0.00 0.00 0.00 2.57
506 507 0.888736 TGGACCAACGCACCAGATTG 60.889 55.000 0.00 0.00 0.00 2.67
507 508 0.889186 GTGGACCAACGCACCAGATT 60.889 55.000 0.00 0.00 34.21 2.40
508 509 1.302511 GTGGACCAACGCACCAGAT 60.303 57.895 0.00 0.00 34.21 2.90
509 510 1.116536 TAGTGGACCAACGCACCAGA 61.117 55.000 0.00 0.00 34.21 3.86
510 511 0.250124 TTAGTGGACCAACGCACCAG 60.250 55.000 0.00 0.00 34.21 4.00
511 512 0.180642 TTTAGTGGACCAACGCACCA 59.819 50.000 0.00 0.00 0.00 4.17
512 513 0.872388 CTTTAGTGGACCAACGCACC 59.128 55.000 0.00 0.00 0.00 5.01
513 514 1.263217 CACTTTAGTGGACCAACGCAC 59.737 52.381 0.00 0.00 42.10 5.34
514 515 1.588674 CACTTTAGTGGACCAACGCA 58.411 50.000 0.00 0.00 42.10 5.24
524 525 3.976704 TGGGCCATCCACTTTAGTG 57.023 52.632 0.00 2.86 41.46 2.74
533 534 6.506538 ACATCTAAGATATATGGGCCATCC 57.493 41.667 25.07 10.92 0.00 3.51
534 535 8.147058 CAGTACATCTAAGATATATGGGCCATC 58.853 40.741 25.07 9.86 0.00 3.51
535 536 7.625280 ACAGTACATCTAAGATATATGGGCCAT 59.375 37.037 24.69 24.69 0.00 4.40
536 537 6.959954 ACAGTACATCTAAGATATATGGGCCA 59.040 38.462 9.61 9.61 0.00 5.36
537 538 7.425224 ACAGTACATCTAAGATATATGGGCC 57.575 40.000 0.00 0.00 0.00 5.80
546 547 9.482175 AGAGACCTTTTACAGTACATCTAAGAT 57.518 33.333 0.00 0.00 0.00 2.40
547 548 8.880991 AGAGACCTTTTACAGTACATCTAAGA 57.119 34.615 0.00 0.00 0.00 2.10
557 558 9.945904 CTCCTTTAATAAGAGACCTTTTACAGT 57.054 33.333 0.00 0.00 32.92 3.55
558 559 9.384764 CCTCCTTTAATAAGAGACCTTTTACAG 57.615 37.037 0.00 0.00 32.92 2.74
559 560 9.108111 TCCTCCTTTAATAAGAGACCTTTTACA 57.892 33.333 0.00 0.00 32.92 2.41
560 561 9.602568 CTCCTCCTTTAATAAGAGACCTTTTAC 57.397 37.037 0.00 0.00 32.92 2.01
561 562 9.556772 TCTCCTCCTTTAATAAGAGACCTTTTA 57.443 33.333 0.00 0.00 32.92 1.52
562 563 8.450780 TCTCCTCCTTTAATAAGAGACCTTTT 57.549 34.615 0.00 0.00 32.92 2.27
563 564 8.322828 GTTCTCCTCCTTTAATAAGAGACCTTT 58.677 37.037 0.00 0.00 32.92 3.11
564 565 7.092802 GGTTCTCCTCCTTTAATAAGAGACCTT 60.093 40.741 0.00 0.00 32.92 3.50
565 566 6.384595 GGTTCTCCTCCTTTAATAAGAGACCT 59.615 42.308 0.00 0.00 32.92 3.85
566 567 6.408320 GGGTTCTCCTCCTTTAATAAGAGACC 60.408 46.154 0.00 0.00 32.92 3.85
567 568 6.156429 TGGGTTCTCCTCCTTTAATAAGAGAC 59.844 42.308 0.00 0.00 36.20 3.36
568 569 6.269194 TGGGTTCTCCTCCTTTAATAAGAGA 58.731 40.000 0.00 0.00 36.20 3.10
569 570 6.561519 TGGGTTCTCCTCCTTTAATAAGAG 57.438 41.667 0.00 0.00 36.20 2.85
570 571 8.814448 ATATGGGTTCTCCTCCTTTAATAAGA 57.186 34.615 0.00 0.00 36.20 2.10
571 572 9.868160 AAATATGGGTTCTCCTCCTTTAATAAG 57.132 33.333 0.00 0.00 36.20 1.73
572 573 9.862149 GAAATATGGGTTCTCCTCCTTTAATAA 57.138 33.333 0.00 0.00 36.20 1.40
573 574 9.009675 TGAAATATGGGTTCTCCTCCTTTAATA 57.990 33.333 0.00 0.00 36.20 0.98
574 575 7.882755 TGAAATATGGGTTCTCCTCCTTTAAT 58.117 34.615 0.00 0.00 36.20 1.40
575 576 7.278724 TGAAATATGGGTTCTCCTCCTTTAA 57.721 36.000 0.00 0.00 36.20 1.52
576 577 6.901615 TGAAATATGGGTTCTCCTCCTTTA 57.098 37.500 0.00 0.00 36.20 1.85
577 578 5.796502 TGAAATATGGGTTCTCCTCCTTT 57.203 39.130 0.00 0.00 36.20 3.11
578 579 5.433051 TGATGAAATATGGGTTCTCCTCCTT 59.567 40.000 0.00 0.00 36.20 3.36
579 580 4.977739 TGATGAAATATGGGTTCTCCTCCT 59.022 41.667 0.00 0.00 36.20 3.69
580 581 5.163152 ACTGATGAAATATGGGTTCTCCTCC 60.163 44.000 0.00 0.00 36.20 4.30
581 582 5.934781 ACTGATGAAATATGGGTTCTCCTC 58.065 41.667 0.00 0.00 36.20 3.71
582 583 5.669447 AGACTGATGAAATATGGGTTCTCCT 59.331 40.000 0.00 0.00 36.20 3.69
583 584 5.934781 AGACTGATGAAATATGGGTTCTCC 58.065 41.667 0.00 0.00 0.00 3.71
584 585 6.586344 TGAGACTGATGAAATATGGGTTCTC 58.414 40.000 0.00 0.00 0.00 2.87
585 586 6.566079 TGAGACTGATGAAATATGGGTTCT 57.434 37.500 0.00 0.00 0.00 3.01
586 587 6.599244 TGTTGAGACTGATGAAATATGGGTTC 59.401 38.462 0.00 0.00 0.00 3.62
587 588 6.484288 TGTTGAGACTGATGAAATATGGGTT 58.516 36.000 0.00 0.00 0.00 4.11
598 599 9.258826 CTAGATAATTCCTTGTTGAGACTGATG 57.741 37.037 0.00 0.00 0.00 3.07
599 600 7.930865 GCTAGATAATTCCTTGTTGAGACTGAT 59.069 37.037 0.00 0.00 0.00 2.90
603 604 7.497249 ACATGCTAGATAATTCCTTGTTGAGAC 59.503 37.037 0.00 0.00 0.00 3.36
608 609 8.270744 AGAGAACATGCTAGATAATTCCTTGTT 58.729 33.333 0.00 0.00 0.00 2.83
632 634 3.263425 AGCTTCGGGAGGTAAATTCAAGA 59.737 43.478 0.00 0.00 33.44 3.02
638 641 2.092323 GCAAAGCTTCGGGAGGTAAAT 58.908 47.619 0.00 0.00 34.30 1.40
639 642 1.530323 GCAAAGCTTCGGGAGGTAAA 58.470 50.000 0.00 0.00 34.30 2.01
649 652 0.848305 CTTTGTGTGCGCAAAGCTTC 59.152 50.000 14.00 0.00 45.57 3.86
659 662 2.887152 AGAGAATTCACCCTTTGTGTGC 59.113 45.455 8.44 0.00 45.61 4.57
664 667 9.736414 ATATGATATGAGAGAATTCACCCTTTG 57.264 33.333 8.44 0.00 0.00 2.77
665 668 9.736414 CATATGATATGAGAGAATTCACCCTTT 57.264 33.333 6.60 0.00 0.00 3.11
669 672 9.311916 GCTACATATGATATGAGAGAATTCACC 57.688 37.037 18.62 0.00 0.00 4.02
685 688 4.080919 AGCTGTTGTGAAGGCTACATATGA 60.081 41.667 10.38 0.00 32.94 2.15
686 689 4.194640 AGCTGTTGTGAAGGCTACATATG 58.805 43.478 0.00 0.00 32.94 1.78
692 695 2.638480 ACAAGCTGTTGTGAAGGCTA 57.362 45.000 0.00 0.00 45.58 3.93
693 696 1.767759 AACAAGCTGTTGTGAAGGCT 58.232 45.000 0.00 0.00 46.68 4.58
707 710 7.012704 TCCATGAAAGAAGAGAACTGAAACAAG 59.987 37.037 0.00 0.00 0.00 3.16
759 766 2.117156 CCTCAAAGCAGCATCCCGG 61.117 63.158 0.00 0.00 0.00 5.73
776 783 7.575365 CAAATATCCTTTTTCAAGTTTGCACC 58.425 34.615 0.00 0.00 0.00 5.01
811 819 9.303537 GTTCTTGATAATCTAGGTGTAGTTGAC 57.696 37.037 0.00 0.00 0.00 3.18
870 1202 3.766545 AGTCAATGGTGTTGGCTAATGT 58.233 40.909 0.00 0.00 31.79 2.71
903 1235 1.569493 CGTGGCGGACAAGTTCTTG 59.431 57.895 10.50 10.50 0.00 3.02
946 1281 3.842925 TTGGGTTGCGCCTGGAGTC 62.843 63.158 4.18 0.00 37.43 3.36
947 1282 3.850098 CTTGGGTTGCGCCTGGAGT 62.850 63.158 4.18 0.00 37.43 3.85
948 1283 3.058160 CTTGGGTTGCGCCTGGAG 61.058 66.667 4.18 0.00 37.43 3.86
956 1291 2.736531 CCCTTGTGCTTGGGTTGC 59.263 61.111 0.00 0.00 38.65 4.17
1005 1346 5.938125 TGATTTCCTAAAACAGCAGTAGGAC 59.062 40.000 0.00 0.00 42.44 3.85
1035 1381 2.294074 ACAGTAAAGCTTGGCAAACGA 58.706 42.857 0.00 0.00 0.00 3.85
1172 1524 0.318120 CCTTGCGGTTTCAAATGCCT 59.682 50.000 0.00 0.00 0.00 4.75
1298 1650 6.415280 CCTAATTCTCGACGATAACAGTTCTG 59.585 42.308 0.00 0.00 0.00 3.02
1311 1663 5.201713 TGATCATCACCCTAATTCTCGAC 57.798 43.478 0.00 0.00 0.00 4.20
1485 1837 5.150715 AGTATAGCTGGATCCATGACTGAA 58.849 41.667 16.63 3.64 0.00 3.02
1519 1871 1.271597 GGCCTGATCTGTGAGTGGTTT 60.272 52.381 0.00 0.00 0.00 3.27
1524 1876 1.876849 ATGAGGCCTGATCTGTGAGT 58.123 50.000 12.00 0.00 0.00 3.41
1572 1924 7.500992 TGTCAACTAACTCCAGATCAATATCC 58.499 38.462 0.00 0.00 31.98 2.59
1732 2087 5.456497 GGTAACAAAACTTTACAAGGCGAAC 59.544 40.000 0.00 0.00 32.01 3.95
1788 2143 4.281435 GGGAAGAGTAGGCAGTATAGGAAC 59.719 50.000 0.00 0.00 0.00 3.62
1834 2189 7.500227 CAGCTTCCATAAAATGATCAGGTCTTA 59.500 37.037 0.09 0.00 0.00 2.10
1904 2265 6.548622 CACATGGAGAATTTCCTCACCATAAT 59.451 38.462 0.00 0.00 42.73 1.28
2049 2410 4.329638 TGGAATGTCATTGTTGGGGTAT 57.670 40.909 1.88 0.00 0.00 2.73
2053 2414 5.149973 TCAAATGGAATGTCATTGTTGGG 57.850 39.130 1.88 0.00 37.42 4.12
2054 2415 5.786311 ACTCAAATGGAATGTCATTGTTGG 58.214 37.500 1.88 0.00 37.42 3.77
2055 2416 8.464404 AGATACTCAAATGGAATGTCATTGTTG 58.536 33.333 1.88 2.76 37.42 3.33
2056 2417 8.585471 AGATACTCAAATGGAATGTCATTGTT 57.415 30.769 1.88 0.00 37.42 2.83
2148 2509 2.886523 TGAAAAGCACTCATGACTTGGG 59.113 45.455 0.00 0.00 0.00 4.12
2210 2571 6.363473 CGGCAAAAGAATTCTTCCGATATAC 58.637 40.000 29.41 12.78 40.92 1.47
2226 2587 1.444212 CATTCCCACGCGGCAAAAG 60.444 57.895 12.47 0.00 0.00 2.27
2235 2596 1.009829 GCACTCTAAGCATTCCCACG 58.990 55.000 0.00 0.00 0.00 4.94
2282 2643 1.002857 AGAAATGGACTGGGGAAGGG 58.997 55.000 0.00 0.00 0.00 3.95
2564 2925 5.184096 TGGTTTGTTTCTGTAGTTTGCTCAA 59.816 36.000 0.00 0.00 0.00 3.02
2602 2963 5.079643 AGGGAACTTGATAAATGCTGTTGT 58.920 37.500 0.00 0.00 37.44 3.32
2649 3010 3.552875 TCCTATCTGGAGGTTACTGACG 58.447 50.000 0.00 0.00 40.56 4.35
2661 3022 5.416326 CGGATCCTTACTTACTCCTATCTGG 59.584 48.000 10.75 0.00 37.10 3.86
2670 3031 3.393426 TCCACCGGATCCTTACTTACT 57.607 47.619 9.46 0.00 0.00 2.24
2672 3033 3.389983 CCAATCCACCGGATCCTTACTTA 59.610 47.826 9.46 0.00 42.27 2.24
2684 3045 2.354729 TGGCCTTCCAATCCACCG 59.645 61.111 3.32 0.00 39.99 4.94
2715 3076 2.061740 ACTCGAAAGTAAGTCCACGC 57.938 50.000 0.00 0.00 32.59 5.34
2724 3085 5.707242 ATCTGTCAGACAACTCGAAAGTA 57.293 39.130 4.21 0.00 33.48 2.24
2800 3162 0.884704 GCGAAGTTGGCCTGACTTGA 60.885 55.000 23.88 0.00 37.46 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.