Multiple sequence alignment - TraesCS3A01G083600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G083600 chr3A 100.000 4173 0 0 1 4173 53737641 53741813 0.000000e+00 7707.0
1 TraesCS3A01G083600 chr3A 85.714 77 6 4 2770 2844 681566949 681567022 4.470000e-10 76.8
2 TraesCS3A01G083600 chr3D 90.583 2145 148 19 1 2119 41785413 41783297 0.000000e+00 2793.0
3 TraesCS3A01G083600 chr3D 87.349 1075 83 18 2843 3891 41783299 41782252 0.000000e+00 1182.0
4 TraesCS3A01G083600 chr3D 86.530 683 80 5 2173 2844 545039457 545040138 0.000000e+00 741.0
5 TraesCS3A01G083600 chr3D 83.292 802 118 10 1 796 173824248 173823457 0.000000e+00 725.0
6 TraesCS3A01G083600 chr3D 82.690 803 116 15 1 796 6522138 6521352 0.000000e+00 691.0
7 TraesCS3A01G083600 chr3D 84.940 664 86 11 1 661 310695082 310694430 0.000000e+00 660.0
8 TraesCS3A01G083600 chr3D 85.172 290 25 7 3894 4170 393093729 393094013 8.830000e-72 281.0
9 TraesCS3A01G083600 chr3D 100.000 29 0 0 3897 3925 520355308 520355336 2.000000e-03 54.7
10 TraesCS3A01G083600 chr3B 95.381 1234 45 5 875 2106 66170772 66171995 0.000000e+00 1953.0
11 TraesCS3A01G083600 chr3B 89.294 850 70 4 3067 3896 66172857 66173705 0.000000e+00 1046.0
12 TraesCS3A01G083600 chr3B 82.103 799 125 15 1 793 155598186 155597400 0.000000e+00 667.0
13 TraesCS3A01G083600 chr3B 80.000 175 24 10 2366 2535 786039771 786039939 7.330000e-23 119.0
14 TraesCS3A01G083600 chr1D 88.284 1084 104 14 878 1943 250922370 250923448 0.000000e+00 1277.0
15 TraesCS3A01G083600 chr1D 86.322 1082 118 21 879 1943 29692862 29691794 0.000000e+00 1151.0
16 TraesCS3A01G083600 chr1D 87.422 962 113 4 983 1943 30025634 30026588 0.000000e+00 1099.0
17 TraesCS3A01G083600 chr1D 80.758 660 108 8 3083 3723 250925210 250925869 8.060000e-137 497.0
18 TraesCS3A01G083600 chr1D 78.067 652 121 10 3074 3706 30030651 30031299 3.910000e-105 392.0
19 TraesCS3A01G083600 chr1D 100.000 29 0 0 3897 3925 468337209 468337181 2.000000e-03 54.7
20 TraesCS3A01G083600 chr1B 88.192 1084 105 14 878 1943 363480761 363479683 0.000000e+00 1271.0
21 TraesCS3A01G083600 chr1B 80.030 656 112 7 3086 3722 363477971 363477316 6.320000e-128 468.0
22 TraesCS3A01G083600 chr1B 78.770 683 121 12 3094 3754 11408427 11409107 1.780000e-118 436.0
23 TraesCS3A01G083600 chr1A 88.007 1084 107 14 878 1943 321110395 321111473 0.000000e+00 1260.0
24 TraesCS3A01G083600 chr1A 85.374 629 88 2 2218 2842 564572053 564571425 0.000000e+00 649.0
25 TraesCS3A01G083600 chr1A 80.368 652 109 7 3083 3715 321113806 321114457 1.050000e-130 477.0
26 TraesCS3A01G083600 chr2D 86.537 1077 114 19 883 1943 589318672 589317611 0.000000e+00 1157.0
27 TraesCS3A01G083600 chr2D 86.124 418 49 2 1 417 183037774 183038183 3.830000e-120 442.0
28 TraesCS3A01G083600 chr2B 86.267 1034 111 20 935 1956 712960252 712959238 0.000000e+00 1094.0
29 TraesCS3A01G083600 chr2B 82.022 267 30 8 3898 4149 135575135 135574872 1.180000e-50 211.0
30 TraesCS3A01G083600 chr2B 80.392 153 23 5 2366 2515 50302934 50302786 4.410000e-20 110.0
31 TraesCS3A01G083600 chr2A 85.226 1083 128 18 878 1943 723652600 723651533 0.000000e+00 1085.0
32 TraesCS3A01G083600 chr2A 78.146 151 29 3 2366 2513 437970163 437970312 4.440000e-15 93.5
33 TraesCS3A01G083600 chr7B 84.758 807 100 11 1 793 429278314 429279111 0.000000e+00 787.0
34 TraesCS3A01G083600 chr7B 79.852 809 134 14 1 793 96581602 96582397 7.830000e-157 564.0
35 TraesCS3A01G083600 chr7B 93.782 193 10 1 3897 4087 253611634 253611826 5.280000e-74 289.0
36 TraesCS3A01G083600 chr7B 80.117 171 23 8 2364 2528 84328001 84328166 2.640000e-22 117.0
37 TraesCS3A01G083600 chr7B 92.308 39 3 0 3897 3935 726742840 726742802 5.830000e-04 56.5
38 TraesCS3A01G083600 chr7A 87.311 662 71 5 1 659 477841423 477842074 0.000000e+00 745.0
39 TraesCS3A01G083600 chr7A 83.302 539 69 3 2173 2701 609264409 609263882 1.050000e-130 477.0
40 TraesCS3A01G083600 chr7A 83.215 423 53 6 2175 2588 692025359 692024946 5.100000e-99 372.0
41 TraesCS3A01G083600 chr5B 83.965 792 109 12 1 786 348443621 348442842 0.000000e+00 743.0
42 TraesCS3A01G083600 chr5B 85.640 578 70 8 1 575 553343394 553343961 2.780000e-166 595.0
43 TraesCS3A01G083600 chr5B 82.166 628 88 14 2218 2832 490547810 490547194 6.180000e-143 518.0
44 TraesCS3A01G083600 chr5B 77.291 731 113 24 2156 2842 519662571 519663292 8.470000e-102 381.0
45 TraesCS3A01G083600 chr5B 84.062 389 57 4 2453 2841 225513427 225513810 1.830000e-98 370.0
46 TraesCS3A01G083600 chr7D 83.417 796 114 10 1 793 473109921 473110701 0.000000e+00 723.0
47 TraesCS3A01G083600 chr7D 89.310 290 18 3 3897 4173 205564250 205564539 6.640000e-93 351.0
48 TraesCS3A01G083600 chr5D 85.217 690 82 9 1 687 418480848 418480176 0.000000e+00 691.0
49 TraesCS3A01G083600 chr5D 83.886 664 89 8 1 661 544195617 544196265 5.930000e-173 617.0
50 TraesCS3A01G083600 chr5D 83.224 608 82 7 2164 2751 482593087 482593694 1.320000e-149 540.0
51 TraesCS3A01G083600 chr5D 83.974 468 64 7 2383 2840 507619571 507619105 4.950000e-119 438.0
52 TraesCS3A01G083600 chr5D 93.031 287 10 1 3897 4173 26885641 26885355 1.080000e-110 411.0
53 TraesCS3A01G083600 chr5D 89.931 288 18 3 3897 4173 324360538 324360825 1.100000e-95 361.0
54 TraesCS3A01G083600 chr5D 84.828 290 29 7 3897 4173 256071384 256071097 1.140000e-70 278.0
55 TraesCS3A01G083600 chr5D 95.556 45 2 0 2173 2217 565312515 565312559 5.790000e-09 73.1
56 TraesCS3A01G083600 chr6A 84.414 648 97 4 149 793 616396364 616397010 5.890000e-178 634.0
57 TraesCS3A01G083600 chr6A 97.473 277 7 0 3897 4173 464136953 464137229 1.360000e-129 473.0
58 TraesCS3A01G083600 chr4A 83.258 663 94 8 1 661 625101925 625101278 9.990000e-166 593.0
59 TraesCS3A01G083600 chr6D 83.205 649 105 4 148 793 473510328 473509681 3.590000e-165 592.0
60 TraesCS3A01G083600 chr6D 85.441 522 62 5 4 523 382591498 382590989 7.940000e-147 531.0
61 TraesCS3A01G083600 chr6D 100.000 30 0 0 3897 3926 8255930 8255959 5.830000e-04 56.5
62 TraesCS3A01G083600 chr4B 88.017 484 58 0 2360 2843 584533409 584533892 1.300000e-159 573.0
63 TraesCS3A01G083600 chr5A 83.162 291 34 4 3897 4172 555205924 555205634 6.930000e-63 252.0
64 TraesCS3A01G083600 chr6B 81.852 270 31 7 3895 4149 201792285 201792019 1.180000e-50 211.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G083600 chr3A 53737641 53741813 4172 False 7707.0 7707 100.0000 1 4173 1 chr3A.!!$F1 4172
1 TraesCS3A01G083600 chr3D 41782252 41785413 3161 True 1987.5 2793 88.9660 1 3891 2 chr3D.!!$R4 3890
2 TraesCS3A01G083600 chr3D 545039457 545040138 681 False 741.0 741 86.5300 2173 2844 1 chr3D.!!$F3 671
3 TraesCS3A01G083600 chr3D 173823457 173824248 791 True 725.0 725 83.2920 1 796 1 chr3D.!!$R2 795
4 TraesCS3A01G083600 chr3D 6521352 6522138 786 True 691.0 691 82.6900 1 796 1 chr3D.!!$R1 795
5 TraesCS3A01G083600 chr3D 310694430 310695082 652 True 660.0 660 84.9400 1 661 1 chr3D.!!$R3 660
6 TraesCS3A01G083600 chr3B 66170772 66173705 2933 False 1499.5 1953 92.3375 875 3896 2 chr3B.!!$F2 3021
7 TraesCS3A01G083600 chr3B 155597400 155598186 786 True 667.0 667 82.1030 1 793 1 chr3B.!!$R1 792
8 TraesCS3A01G083600 chr1D 29691794 29692862 1068 True 1151.0 1151 86.3220 879 1943 1 chr1D.!!$R1 1064
9 TraesCS3A01G083600 chr1D 30025634 30026588 954 False 1099.0 1099 87.4220 983 1943 1 chr1D.!!$F1 960
10 TraesCS3A01G083600 chr1D 250922370 250925869 3499 False 887.0 1277 84.5210 878 3723 2 chr1D.!!$F3 2845
11 TraesCS3A01G083600 chr1D 30030651 30031299 648 False 392.0 392 78.0670 3074 3706 1 chr1D.!!$F2 632
12 TraesCS3A01G083600 chr1B 363477316 363480761 3445 True 869.5 1271 84.1110 878 3722 2 chr1B.!!$R1 2844
13 TraesCS3A01G083600 chr1B 11408427 11409107 680 False 436.0 436 78.7700 3094 3754 1 chr1B.!!$F1 660
14 TraesCS3A01G083600 chr1A 321110395 321114457 4062 False 868.5 1260 84.1875 878 3715 2 chr1A.!!$F1 2837
15 TraesCS3A01G083600 chr1A 564571425 564572053 628 True 649.0 649 85.3740 2218 2842 1 chr1A.!!$R1 624
16 TraesCS3A01G083600 chr2D 589317611 589318672 1061 True 1157.0 1157 86.5370 883 1943 1 chr2D.!!$R1 1060
17 TraesCS3A01G083600 chr2B 712959238 712960252 1014 True 1094.0 1094 86.2670 935 1956 1 chr2B.!!$R3 1021
18 TraesCS3A01G083600 chr2A 723651533 723652600 1067 True 1085.0 1085 85.2260 878 1943 1 chr2A.!!$R1 1065
19 TraesCS3A01G083600 chr7B 429278314 429279111 797 False 787.0 787 84.7580 1 793 1 chr7B.!!$F4 792
20 TraesCS3A01G083600 chr7B 96581602 96582397 795 False 564.0 564 79.8520 1 793 1 chr7B.!!$F2 792
21 TraesCS3A01G083600 chr7A 477841423 477842074 651 False 745.0 745 87.3110 1 659 1 chr7A.!!$F1 658
22 TraesCS3A01G083600 chr7A 609263882 609264409 527 True 477.0 477 83.3020 2173 2701 1 chr7A.!!$R1 528
23 TraesCS3A01G083600 chr5B 348442842 348443621 779 True 743.0 743 83.9650 1 786 1 chr5B.!!$R1 785
24 TraesCS3A01G083600 chr5B 553343394 553343961 567 False 595.0 595 85.6400 1 575 1 chr5B.!!$F3 574
25 TraesCS3A01G083600 chr5B 490547194 490547810 616 True 518.0 518 82.1660 2218 2832 1 chr5B.!!$R2 614
26 TraesCS3A01G083600 chr5B 519662571 519663292 721 False 381.0 381 77.2910 2156 2842 1 chr5B.!!$F2 686
27 TraesCS3A01G083600 chr7D 473109921 473110701 780 False 723.0 723 83.4170 1 793 1 chr7D.!!$F2 792
28 TraesCS3A01G083600 chr5D 418480176 418480848 672 True 691.0 691 85.2170 1 687 1 chr5D.!!$R3 686
29 TraesCS3A01G083600 chr5D 544195617 544196265 648 False 617.0 617 83.8860 1 661 1 chr5D.!!$F3 660
30 TraesCS3A01G083600 chr5D 482593087 482593694 607 False 540.0 540 83.2240 2164 2751 1 chr5D.!!$F2 587
31 TraesCS3A01G083600 chr6A 616396364 616397010 646 False 634.0 634 84.4140 149 793 1 chr6A.!!$F2 644
32 TraesCS3A01G083600 chr4A 625101278 625101925 647 True 593.0 593 83.2580 1 661 1 chr4A.!!$R1 660
33 TraesCS3A01G083600 chr6D 473509681 473510328 647 True 592.0 592 83.2050 148 793 1 chr6D.!!$R2 645
34 TraesCS3A01G083600 chr6D 382590989 382591498 509 True 531.0 531 85.4410 4 523 1 chr6D.!!$R1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
780 827 0.168128 GTCGAATTTGCAAGTCCGGG 59.832 55.0 0.0 0.0 0.0 5.73 F
1624 1720 0.171455 CGGGAGACAGGAAGAGTTCG 59.829 60.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 2264 0.249031 TGTCTGTGAGTGTGAGCGTG 60.249 55.0 0.0 0.0 0.0 5.34 R
3327 6118 0.243907 CCGACGACACAATCCTCAGT 59.756 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 146 0.249953 TAGGCGGCGTTTGTGAAGAA 60.250 50.000 9.37 0.00 0.00 2.52
146 147 1.370051 GGCGGCGTTTGTGAAGAAC 60.370 57.895 9.37 0.00 0.00 3.01
237 239 1.064463 GGATGTGGAGAGGGCATTTGA 60.064 52.381 0.00 0.00 0.00 2.69
261 263 1.679153 GCTTCAAACTCGTTGGGGAAA 59.321 47.619 0.00 0.00 37.85 3.13
297 299 4.712829 TGCAATGATGTGGGAATCAGAAAT 59.287 37.500 0.00 0.00 39.84 2.17
317 319 3.921119 TTTTGTGGCAGCTGATAACAG 57.079 42.857 20.43 0.00 45.91 3.16
368 372 2.179427 CAGTGAGGGTGATGGTGTAGA 58.821 52.381 0.00 0.00 0.00 2.59
436 443 1.838715 AGGATCAAGATGCAGCTCAGT 59.161 47.619 4.22 0.00 0.00 3.41
444 451 5.884232 TCAAGATGCAGCTCAGTTTATGAAT 59.116 36.000 4.22 0.00 37.52 2.57
475 482 6.092396 GCAGATGCATCAGAATATTCGAGATT 59.908 38.462 27.81 8.92 41.59 2.40
564 572 6.604795 AGGAAGCTAATATTTGAGTTGTGCAT 59.395 34.615 0.77 0.00 0.00 3.96
629 639 3.971871 ACATTTGTTATTTGTGTGCGACG 59.028 39.130 0.00 0.00 0.00 5.12
640 650 1.589320 GTGTGCGACGTTGACTTGTAA 59.411 47.619 7.08 0.00 0.00 2.41
661 671 5.375417 AAGATCAACGTGCATGAATTTGA 57.625 34.783 14.17 12.57 0.00 2.69
662 672 4.978186 AGATCAACGTGCATGAATTTGAG 58.022 39.130 14.17 0.00 30.07 3.02
663 673 4.696877 AGATCAACGTGCATGAATTTGAGA 59.303 37.500 14.17 0.03 30.07 3.27
665 675 2.907910 ACGTGCATGAATTTGAGAGC 57.092 45.000 14.17 0.00 0.00 4.09
666 676 1.470098 ACGTGCATGAATTTGAGAGCC 59.530 47.619 14.17 0.00 0.00 4.70
667 677 1.202222 CGTGCATGAATTTGAGAGCCC 60.202 52.381 0.00 0.00 0.00 5.19
668 678 1.097232 TGCATGAATTTGAGAGCCCG 58.903 50.000 0.00 0.00 0.00 6.13
669 679 1.339920 TGCATGAATTTGAGAGCCCGA 60.340 47.619 0.00 0.00 0.00 5.14
681 711 9.793259 AATTTGAGAGCCCGAATTTAAGATATA 57.207 29.630 0.00 0.00 28.39 0.86
707 750 6.950842 AGATGTCAGGTGTGAAATATGAAGA 58.049 36.000 0.00 0.00 29.91 2.87
722 765 4.730949 ATGAAGACCCATTTGAATGCAG 57.269 40.909 0.00 0.00 35.08 4.41
747 791 1.707239 GGCGTGTCCAAACGTGTTCA 61.707 55.000 0.00 0.00 45.32 3.18
780 827 0.168128 GTCGAATTTGCAAGTCCGGG 59.832 55.000 0.00 0.00 0.00 5.73
793 840 0.386113 GTCCGGGTGTAGATGCTCTC 59.614 60.000 0.00 0.00 0.00 3.20
810 857 3.530535 CTCTCAGATCTCACTCGTCTCA 58.469 50.000 0.00 0.00 0.00 3.27
822 869 1.025113 TCGTCTCACCTAGTGCTCCG 61.025 60.000 0.00 0.00 32.98 4.63
854 901 2.593026 ACCCTCCATCGCAAAGAAAAA 58.407 42.857 0.00 0.00 0.00 1.94
1082 1160 1.080705 CCTCGGTGGTCTTCGTGAC 60.081 63.158 3.42 3.42 44.63 3.67
1624 1720 0.171455 CGGGAGACAGGAAGAGTTCG 59.829 60.000 0.00 0.00 0.00 3.95
1628 1724 1.805345 GAGACAGGAAGAGTTCGTCGA 59.195 52.381 0.00 0.00 0.00 4.20
1677 1773 1.589993 CGAGTTCTGCATCGGCGAT 60.590 57.895 18.14 18.14 45.35 4.58
1794 1890 0.904865 ACGAGCACATGAAGAGGGGA 60.905 55.000 0.00 0.00 0.00 4.81
1870 1966 0.320771 TGAGGCGAGAACCAAGAAGC 60.321 55.000 0.00 0.00 0.00 3.86
1943 2039 3.433343 ACAACATCAAGGCCATGATCAA 58.567 40.909 20.39 0.00 37.96 2.57
1944 2040 4.028131 ACAACATCAAGGCCATGATCAAT 58.972 39.130 20.39 6.77 37.96 2.57
1945 2041 4.142026 ACAACATCAAGGCCATGATCAATG 60.142 41.667 20.39 19.23 37.96 2.82
1946 2042 3.905968 ACATCAAGGCCATGATCAATGA 58.094 40.909 20.39 4.01 37.96 2.57
1947 2043 4.480115 ACATCAAGGCCATGATCAATGAT 58.520 39.130 20.39 0.00 37.96 2.45
1948 2044 4.280929 ACATCAAGGCCATGATCAATGATG 59.719 41.667 20.39 17.78 44.97 3.07
1949 2045 4.173290 TCAAGGCCATGATCAATGATGA 57.827 40.909 6.57 0.00 38.72 2.92
1978 2074 3.505464 AGTAGATCCAAACTTCCGTCG 57.495 47.619 0.00 0.00 0.00 5.12
1979 2075 2.165845 AGTAGATCCAAACTTCCGTCGG 59.834 50.000 4.39 4.39 0.00 4.79
2006 2114 1.881973 ACTGCCATATATGCGCCAAAG 59.118 47.619 17.98 13.18 0.00 2.77
2122 2237 7.833285 AAGAAAAAGCTGTTTACTTATCCCA 57.167 32.000 0.66 0.00 0.00 4.37
2123 2238 7.833285 AGAAAAAGCTGTTTACTTATCCCAA 57.167 32.000 0.66 0.00 0.00 4.12
2124 2239 8.245195 AGAAAAAGCTGTTTACTTATCCCAAA 57.755 30.769 0.66 0.00 0.00 3.28
2132 2247 9.659830 GCTGTTTACTTATCCCAAATAATAACG 57.340 33.333 0.00 0.00 0.00 3.18
2133 2248 9.659830 CTGTTTACTTATCCCAAATAATAACGC 57.340 33.333 0.00 0.00 0.00 4.84
2134 2249 9.398538 TGTTTACTTATCCCAAATAATAACGCT 57.601 29.630 0.00 0.00 0.00 5.07
2135 2250 9.874215 GTTTACTTATCCCAAATAATAACGCTC 57.126 33.333 0.00 0.00 0.00 5.03
2136 2251 9.841295 TTTACTTATCCCAAATAATAACGCTCT 57.159 29.630 0.00 0.00 0.00 4.09
2137 2252 7.730364 ACTTATCCCAAATAATAACGCTCTG 57.270 36.000 0.00 0.00 0.00 3.35
2138 2253 7.506114 ACTTATCCCAAATAATAACGCTCTGA 58.494 34.615 0.00 0.00 0.00 3.27
2139 2254 7.441458 ACTTATCCCAAATAATAACGCTCTGAC 59.559 37.037 0.00 0.00 0.00 3.51
2140 2255 5.092554 TCCCAAATAATAACGCTCTGACA 57.907 39.130 0.00 0.00 0.00 3.58
2141 2256 4.873827 TCCCAAATAATAACGCTCTGACAC 59.126 41.667 0.00 0.00 0.00 3.67
2142 2257 4.876107 CCCAAATAATAACGCTCTGACACT 59.124 41.667 0.00 0.00 0.00 3.55
2143 2258 5.354234 CCCAAATAATAACGCTCTGACACTT 59.646 40.000 0.00 0.00 0.00 3.16
2144 2259 6.537301 CCCAAATAATAACGCTCTGACACTTA 59.463 38.462 0.00 0.00 0.00 2.24
2145 2260 7.226720 CCCAAATAATAACGCTCTGACACTTAT 59.773 37.037 0.00 0.00 0.00 1.73
2146 2261 8.612619 CCAAATAATAACGCTCTGACACTTATT 58.387 33.333 0.00 0.00 0.00 1.40
2150 2265 9.811995 ATAATAACGCTCTGACACTTATTAACA 57.188 29.630 0.00 0.00 0.00 2.41
2151 2266 5.840940 AACGCTCTGACACTTATTAACAC 57.159 39.130 0.00 0.00 0.00 3.32
2152 2267 3.918591 ACGCTCTGACACTTATTAACACG 59.081 43.478 0.00 0.00 0.00 4.49
2153 2268 3.241678 CGCTCTGACACTTATTAACACGC 60.242 47.826 0.00 0.00 0.00 5.34
2154 2269 3.927142 GCTCTGACACTTATTAACACGCT 59.073 43.478 0.00 0.00 0.00 5.07
2155 2270 4.031878 GCTCTGACACTTATTAACACGCTC 59.968 45.833 0.00 0.00 0.00 5.03
2156 2271 5.128992 TCTGACACTTATTAACACGCTCA 57.871 39.130 0.00 0.00 0.00 4.26
2157 2272 4.921515 TCTGACACTTATTAACACGCTCAC 59.078 41.667 0.00 0.00 0.00 3.51
2158 2273 4.623002 TGACACTTATTAACACGCTCACA 58.377 39.130 0.00 0.00 0.00 3.58
2159 2274 4.446385 TGACACTTATTAACACGCTCACAC 59.554 41.667 0.00 0.00 0.00 3.82
2160 2275 4.628074 ACACTTATTAACACGCTCACACT 58.372 39.130 0.00 0.00 0.00 3.55
2161 2276 4.684703 ACACTTATTAACACGCTCACACTC 59.315 41.667 0.00 0.00 0.00 3.51
2162 2277 4.684242 CACTTATTAACACGCTCACACTCA 59.316 41.667 0.00 0.00 0.00 3.41
2163 2278 4.684703 ACTTATTAACACGCTCACACTCAC 59.315 41.667 0.00 0.00 0.00 3.51
2164 2279 2.588027 TTAACACGCTCACACTCACA 57.412 45.000 0.00 0.00 0.00 3.58
2165 2280 2.134201 TAACACGCTCACACTCACAG 57.866 50.000 0.00 0.00 0.00 3.66
2166 2281 0.459899 AACACGCTCACACTCACAGA 59.540 50.000 0.00 0.00 0.00 3.41
2167 2282 0.249073 ACACGCTCACACTCACAGAC 60.249 55.000 0.00 0.00 0.00 3.51
2168 2283 0.249031 CACGCTCACACTCACAGACA 60.249 55.000 0.00 0.00 0.00 3.41
2169 2284 0.676184 ACGCTCACACTCACAGACAT 59.324 50.000 0.00 0.00 0.00 3.06
2170 2285 1.886542 ACGCTCACACTCACAGACATA 59.113 47.619 0.00 0.00 0.00 2.29
2171 2286 2.493675 ACGCTCACACTCACAGACATAT 59.506 45.455 0.00 0.00 0.00 1.78
2193 2309 3.449632 TCGATGCCGTTCGATTCATTTA 58.550 40.909 0.01 0.00 42.81 1.40
2221 2346 2.057137 TTGAAGCAGTTGCCAAGAGT 57.943 45.000 0.00 0.00 43.38 3.24
2225 2350 0.536006 AGCAGTTGCCAAGAGTCACC 60.536 55.000 0.00 0.00 43.38 4.02
2227 2352 1.233019 CAGTTGCCAAGAGTCACCTG 58.767 55.000 0.00 0.00 0.00 4.00
2237 2362 2.194859 AGAGTCACCTGAGCATCCAAT 58.805 47.619 0.00 0.00 0.00 3.16
2310 2436 0.037882 CGGACATATGATGCTCGCCT 60.038 55.000 10.38 0.00 0.00 5.52
2321 2447 2.338620 CTCGCCTGAACGTGTGGA 59.661 61.111 6.00 0.00 0.00 4.02
2336 2487 1.138069 TGTGGACGAAACTGCTCTTCA 59.862 47.619 0.00 0.00 0.00 3.02
2343 2494 2.508526 GAAACTGCTCTTCACCCACAT 58.491 47.619 0.00 0.00 0.00 3.21
2346 2497 1.632409 ACTGCTCTTCACCCACATGAT 59.368 47.619 0.00 0.00 0.00 2.45
2362 2513 3.197265 CATGATGCTCACACGGTGATAA 58.803 45.455 16.29 0.00 41.94 1.75
2376 2527 3.242739 CGGTGATAAATGGCAACTACAGC 60.243 47.826 0.00 0.00 37.61 4.40
2396 2547 2.620115 GCTGTGCATATGTGGCAACTAT 59.380 45.455 4.29 0.00 43.91 2.12
2400 2551 6.375945 TGTGCATATGTGGCAACTATTTAG 57.624 37.500 4.29 0.00 43.91 1.85
2408 2559 5.312895 TGTGGCAACTATTTAGTCACACAT 58.687 37.500 13.47 0.00 38.24 3.21
2480 2666 4.252878 CAACTACAGGTGTGCATATGTGA 58.747 43.478 4.29 0.00 0.00 3.58
2528 2761 7.750229 ACTATGGTTGATAATACATGGCAAG 57.250 36.000 0.00 0.00 0.00 4.01
2569 2844 6.018588 CGTGACAACTCCAATTAGTTACACAA 60.019 38.462 19.16 0.00 41.12 3.33
2596 2871 8.190784 GGCAACTATATTTAATGATACATGGCC 58.809 37.037 0.00 0.00 0.00 5.36
2619 2894 5.220662 CCGACATGGCAACTAGAGTTAATTG 60.221 44.000 0.00 0.00 36.32 2.32
2687 2964 1.004277 GGGGATGAGTAGTTGCCACAA 59.996 52.381 0.00 0.00 0.00 3.33
2701 2978 1.153046 CACAAAGGGTCGTGTGGGT 60.153 57.895 0.00 0.00 41.19 4.51
2775 3052 2.204034 TGTGGGCTGTCTCCTGGA 59.796 61.111 0.00 0.00 0.00 3.86
2794 3072 1.660607 GATACGACCACACGACTCGTA 59.339 52.381 3.20 1.98 44.55 3.43
2832 3110 2.980562 TCACACGTGTGGCAGTTAC 58.019 52.632 39.88 0.00 45.65 2.50
2844 3122 0.249741 GCAGTTACCGGCGTCCATAT 60.250 55.000 6.01 0.00 0.00 1.78
2845 3123 1.808891 GCAGTTACCGGCGTCCATATT 60.809 52.381 6.01 0.00 0.00 1.28
2846 3124 2.132762 CAGTTACCGGCGTCCATATTC 58.867 52.381 6.01 0.00 0.00 1.75
2856 3134 3.372206 GGCGTCCATATTCATGACATAGC 59.628 47.826 0.00 0.00 33.67 2.97
2870 3148 1.134401 ACATAGCAATGGACCGAGTGG 60.134 52.381 0.00 0.00 37.43 4.00
2890 3168 8.432359 CGAGTGGATTTAAAACTTTAAAATGCC 58.568 33.333 10.53 11.85 43.43 4.40
3160 5951 2.189499 GGGCAATGGCGGAGATGAC 61.189 63.158 0.00 0.00 42.47 3.06
3161 5952 1.451927 GGCAATGGCGGAGATGACA 60.452 57.895 0.00 0.00 42.47 3.58
3164 5955 1.671979 CAATGGCGGAGATGACACAT 58.328 50.000 0.00 0.00 0.00 3.21
3204 5995 1.123861 TCTGCAACAGGAGCTCACCT 61.124 55.000 17.19 1.26 41.43 4.00
3207 5998 0.737715 GCAACAGGAGCTCACCTACG 60.738 60.000 17.19 0.00 38.32 3.51
3236 6027 0.812549 TCGATCGGAATGTGGACGAA 59.187 50.000 16.41 0.00 40.27 3.85
3237 6028 1.202817 TCGATCGGAATGTGGACGAAA 59.797 47.619 16.41 0.00 40.27 3.46
3245 6036 0.395312 ATGTGGACGAAACGGACCTT 59.605 50.000 0.00 0.00 0.00 3.50
3317 6108 1.690209 CCACCCATCCCATTGCTCAAT 60.690 52.381 0.00 0.00 0.00 2.57
3396 6187 2.744202 GTCATGATCAACGTCTTTGCCT 59.256 45.455 0.00 0.00 34.88 4.75
3433 6224 2.264794 GTGGAAGGACGCCGATGT 59.735 61.111 0.00 0.00 0.00 3.06
3515 6306 0.823356 GGTGCTTTGAGTTCCTGCCA 60.823 55.000 0.00 0.00 0.00 4.92
3595 6405 0.188342 ATGGGTTCAACTGGGCACTT 59.812 50.000 0.00 0.00 0.00 3.16
3609 6419 3.319198 ACTTCCCGACGGCATGGT 61.319 61.111 8.86 1.23 0.00 3.55
3725 6536 1.341187 TGGTTGCTGATGATGATGCCA 60.341 47.619 0.00 0.00 0.00 4.92
3764 6575 1.438651 TGCGTGCACCTATTGTCTTC 58.561 50.000 12.15 0.00 0.00 2.87
3772 6583 3.649073 CACCTATTGTCTTCGTGTGTGA 58.351 45.455 0.00 0.00 0.00 3.58
3776 6587 2.665649 TTGTCTTCGTGTGTGACACT 57.334 45.000 17.47 0.00 46.46 3.55
3780 6591 0.301687 CTTCGTGTGTGACACTGCAC 59.698 55.000 17.47 17.83 46.46 4.57
3792 6603 2.186826 ACTGCACGAGTTTGGTGGC 61.187 57.895 0.00 0.00 35.94 5.01
3807 6618 1.270826 GGTGGCTTTCTCTTTGCCTTC 59.729 52.381 0.00 0.00 46.23 3.46
3811 6622 3.319122 TGGCTTTCTCTTTGCCTTCTTTC 59.681 43.478 0.00 0.00 46.23 2.62
3814 6625 4.320861 GCTTTCTCTTTGCCTTCTTTCTCC 60.321 45.833 0.00 0.00 0.00 3.71
3815 6626 4.713792 TTCTCTTTGCCTTCTTTCTCCT 57.286 40.909 0.00 0.00 0.00 3.69
3817 6628 4.646572 TCTCTTTGCCTTCTTTCTCCTTC 58.353 43.478 0.00 0.00 0.00 3.46
3819 6630 5.544176 TCTCTTTGCCTTCTTTCTCCTTCTA 59.456 40.000 0.00 0.00 0.00 2.10
3823 6637 7.725844 TCTTTGCCTTCTTTCTCCTTCTATTTT 59.274 33.333 0.00 0.00 0.00 1.82
3855 6669 9.468532 CTACAGAACATGATAATTCGATCTTCA 57.531 33.333 0.00 0.00 0.00 3.02
3896 6711 4.637977 TGTGATGCGTGGCTATTTTTCATA 59.362 37.500 0.00 0.00 0.00 2.15
3897 6712 4.970003 GTGATGCGTGGCTATTTTTCATAC 59.030 41.667 0.00 0.00 0.00 2.39
3898 6713 4.881273 TGATGCGTGGCTATTTTTCATACT 59.119 37.500 0.00 0.00 0.00 2.12
3899 6714 6.018262 GTGATGCGTGGCTATTTTTCATACTA 60.018 38.462 0.00 0.00 0.00 1.82
3900 6715 5.984233 TGCGTGGCTATTTTTCATACTAG 57.016 39.130 0.00 0.00 0.00 2.57
3901 6716 5.666462 TGCGTGGCTATTTTTCATACTAGA 58.334 37.500 0.00 0.00 0.00 2.43
3902 6717 6.288294 TGCGTGGCTATTTTTCATACTAGAT 58.712 36.000 0.00 0.00 0.00 1.98
3903 6718 6.202762 TGCGTGGCTATTTTTCATACTAGATG 59.797 38.462 0.00 0.00 0.00 2.90
3904 6719 6.423905 GCGTGGCTATTTTTCATACTAGATGA 59.576 38.462 0.00 0.00 0.00 2.92
3905 6720 7.118390 GCGTGGCTATTTTTCATACTAGATGAT 59.882 37.037 0.00 0.00 0.00 2.45
3906 6721 8.993121 CGTGGCTATTTTTCATACTAGATGATT 58.007 33.333 0.00 0.00 0.00 2.57
3912 6727 6.861065 TTTTCATACTAGATGATTTCCCGC 57.139 37.500 0.00 0.00 0.00 6.13
3913 6728 4.174411 TCATACTAGATGATTTCCCGCG 57.826 45.455 0.00 0.00 0.00 6.46
3914 6729 2.433868 TACTAGATGATTTCCCGCGC 57.566 50.000 0.00 0.00 0.00 6.86
3915 6730 0.597637 ACTAGATGATTTCCCGCGCG 60.598 55.000 25.67 25.67 0.00 6.86
3916 6731 0.597637 CTAGATGATTTCCCGCGCGT 60.598 55.000 29.95 9.79 0.00 6.01
3917 6732 0.179094 TAGATGATTTCCCGCGCGTT 60.179 50.000 29.95 7.63 0.00 4.84
3918 6733 1.297598 GATGATTTCCCGCGCGTTG 60.298 57.895 29.95 19.43 0.00 4.10
3919 6734 3.395470 ATGATTTCCCGCGCGTTGC 62.395 57.895 29.95 11.83 41.47 4.17
3920 6735 3.799755 GATTTCCCGCGCGTTGCT 61.800 61.111 29.95 9.03 43.27 3.91
3921 6736 4.101790 ATTTCCCGCGCGTTGCTG 62.102 61.111 29.95 12.82 43.27 4.41
3930 6745 4.166011 GCGTTGCTGCGGACATCC 62.166 66.667 0.00 0.00 0.00 3.51
3931 6746 2.434884 CGTTGCTGCGGACATCCT 60.435 61.111 0.00 0.00 0.00 3.24
3932 6747 2.034879 CGTTGCTGCGGACATCCTT 61.035 57.895 0.00 0.00 0.00 3.36
3933 6748 1.503542 GTTGCTGCGGACATCCTTG 59.496 57.895 0.00 0.00 0.00 3.61
3934 6749 1.073025 TTGCTGCGGACATCCTTGT 59.927 52.632 0.00 0.00 39.32 3.16
3935 6750 0.323302 TTGCTGCGGACATCCTTGTA 59.677 50.000 0.00 0.00 35.79 2.41
3936 6751 0.391130 TGCTGCGGACATCCTTGTAC 60.391 55.000 0.00 0.00 35.79 2.90
3937 6752 0.391130 GCTGCGGACATCCTTGTACA 60.391 55.000 0.00 0.00 36.37 2.90
3938 6753 1.943968 GCTGCGGACATCCTTGTACAA 60.944 52.381 8.28 8.28 36.37 2.41
3939 6754 1.732259 CTGCGGACATCCTTGTACAAC 59.268 52.381 3.59 0.00 36.37 3.32
3940 6755 1.346395 TGCGGACATCCTTGTACAACT 59.654 47.619 3.59 0.00 36.37 3.16
3941 6756 2.224426 TGCGGACATCCTTGTACAACTT 60.224 45.455 3.59 0.00 36.37 2.66
3942 6757 2.159627 GCGGACATCCTTGTACAACTTG 59.840 50.000 3.59 5.29 36.37 3.16
3943 6758 2.159627 CGGACATCCTTGTACAACTTGC 59.840 50.000 3.59 0.30 36.37 4.01
3944 6759 3.412386 GGACATCCTTGTACAACTTGCT 58.588 45.455 3.59 0.00 36.62 3.91
3945 6760 4.575885 GGACATCCTTGTACAACTTGCTA 58.424 43.478 3.59 0.00 36.62 3.49
3946 6761 5.186198 GGACATCCTTGTACAACTTGCTAT 58.814 41.667 3.59 0.00 36.62 2.97
3947 6762 6.346096 GGACATCCTTGTACAACTTGCTATA 58.654 40.000 3.59 0.00 36.62 1.31
3948 6763 6.821665 GGACATCCTTGTACAACTTGCTATAA 59.178 38.462 3.59 0.00 36.62 0.98
3949 6764 7.335924 GGACATCCTTGTACAACTTGCTATAAA 59.664 37.037 3.59 0.00 36.62 1.40
3950 6765 8.807948 ACATCCTTGTACAACTTGCTATAAAT 57.192 30.769 3.59 0.00 33.16 1.40
3951 6766 9.243105 ACATCCTTGTACAACTTGCTATAAATT 57.757 29.630 3.59 0.00 33.16 1.82
3954 6769 9.290988 TCCTTGTACAACTTGCTATAAATTTGA 57.709 29.630 3.59 0.00 0.00 2.69
3961 6776 8.592809 ACAACTTGCTATAAATTTGATTTCCCA 58.407 29.630 0.00 0.00 33.82 4.37
3962 6777 8.872845 CAACTTGCTATAAATTTGATTTCCCAC 58.127 33.333 0.00 0.00 33.82 4.61
3963 6778 8.133024 ACTTGCTATAAATTTGATTTCCCACA 57.867 30.769 0.00 0.00 33.82 4.17
3964 6779 8.253113 ACTTGCTATAAATTTGATTTCCCACAG 58.747 33.333 0.00 0.00 33.82 3.66
3965 6780 7.953005 TGCTATAAATTTGATTTCCCACAGA 57.047 32.000 0.00 0.00 33.82 3.41
3966 6781 8.359875 TGCTATAAATTTGATTTCCCACAGAA 57.640 30.769 0.00 0.00 33.82 3.02
3978 6793 6.729690 TTTCCCACAGAAAGTTGAATCATT 57.270 33.333 0.00 0.00 39.60 2.57
3979 6794 5.710513 TCCCACAGAAAGTTGAATCATTG 57.289 39.130 0.00 0.00 0.00 2.82
3980 6795 5.384336 TCCCACAGAAAGTTGAATCATTGA 58.616 37.500 0.00 0.00 0.00 2.57
3981 6796 5.832595 TCCCACAGAAAGTTGAATCATTGAA 59.167 36.000 0.00 0.00 0.00 2.69
3982 6797 6.016024 TCCCACAGAAAGTTGAATCATTGAAG 60.016 38.462 0.00 0.00 0.00 3.02
3983 6798 6.239120 CCCACAGAAAGTTGAATCATTGAAGT 60.239 38.462 0.00 0.00 0.00 3.01
3984 6799 6.860023 CCACAGAAAGTTGAATCATTGAAGTC 59.140 38.462 0.00 0.00 0.00 3.01
3985 6800 7.255381 CCACAGAAAGTTGAATCATTGAAGTCT 60.255 37.037 0.00 0.00 0.00 3.24
3986 6801 7.590322 CACAGAAAGTTGAATCATTGAAGTCTG 59.410 37.037 0.00 0.00 35.02 3.51
3987 6802 6.581542 CAGAAAGTTGAATCATTGAAGTCTGC 59.418 38.462 0.00 0.00 0.00 4.26
3988 6803 6.263842 AGAAAGTTGAATCATTGAAGTCTGCA 59.736 34.615 0.00 0.00 0.00 4.41
3989 6804 6.395426 AAGTTGAATCATTGAAGTCTGCAA 57.605 33.333 0.00 0.00 0.00 4.08
3990 6805 6.395426 AGTTGAATCATTGAAGTCTGCAAA 57.605 33.333 0.00 0.00 0.00 3.68
3991 6806 6.989659 AGTTGAATCATTGAAGTCTGCAAAT 58.010 32.000 0.00 0.00 0.00 2.32
3992 6807 7.088905 AGTTGAATCATTGAAGTCTGCAAATC 58.911 34.615 0.00 0.00 0.00 2.17
3993 6808 6.578163 TGAATCATTGAAGTCTGCAAATCA 57.422 33.333 0.00 0.00 0.00 2.57
3994 6809 6.617879 TGAATCATTGAAGTCTGCAAATCAG 58.382 36.000 0.00 0.00 44.21 2.90
3995 6810 6.208007 TGAATCATTGAAGTCTGCAAATCAGT 59.792 34.615 0.00 0.00 43.32 3.41
3996 6811 6.585695 ATCATTGAAGTCTGCAAATCAGTT 57.414 33.333 0.00 0.00 43.32 3.16
3997 6812 7.692460 ATCATTGAAGTCTGCAAATCAGTTA 57.308 32.000 0.00 0.00 43.32 2.24
3998 6813 7.692460 TCATTGAAGTCTGCAAATCAGTTAT 57.308 32.000 0.00 0.00 43.32 1.89
3999 6814 8.114331 TCATTGAAGTCTGCAAATCAGTTATT 57.886 30.769 0.00 0.00 43.32 1.40
4000 6815 8.579006 TCATTGAAGTCTGCAAATCAGTTATTT 58.421 29.630 0.00 0.00 43.32 1.40
4001 6816 8.857216 CATTGAAGTCTGCAAATCAGTTATTTC 58.143 33.333 0.00 0.00 43.32 2.17
4002 6817 7.509141 TGAAGTCTGCAAATCAGTTATTTCA 57.491 32.000 0.00 0.00 43.32 2.69
4003 6818 7.939782 TGAAGTCTGCAAATCAGTTATTTCAA 58.060 30.769 0.00 0.00 43.32 2.69
4004 6819 8.077991 TGAAGTCTGCAAATCAGTTATTTCAAG 58.922 33.333 0.00 0.00 43.32 3.02
4005 6820 6.917533 AGTCTGCAAATCAGTTATTTCAAGG 58.082 36.000 0.00 0.00 43.32 3.61
4006 6821 5.574443 GTCTGCAAATCAGTTATTTCAAGGC 59.426 40.000 0.00 0.00 43.32 4.35
4007 6822 5.243507 TCTGCAAATCAGTTATTTCAAGGCA 59.756 36.000 0.00 0.00 43.32 4.75
4008 6823 5.472148 TGCAAATCAGTTATTTCAAGGCAG 58.528 37.500 0.00 0.00 35.54 4.85
4009 6824 5.010922 TGCAAATCAGTTATTTCAAGGCAGT 59.989 36.000 0.00 0.00 35.54 4.40
4010 6825 5.928264 GCAAATCAGTTATTTCAAGGCAGTT 59.072 36.000 0.00 0.00 35.54 3.16
4011 6826 6.424812 GCAAATCAGTTATTTCAAGGCAGTTT 59.575 34.615 0.00 0.00 35.54 2.66
4012 6827 7.359514 GCAAATCAGTTATTTCAAGGCAGTTTC 60.360 37.037 0.00 0.00 35.54 2.78
4013 6828 6.899393 ATCAGTTATTTCAAGGCAGTTTCA 57.101 33.333 0.00 0.00 0.00 2.69
4014 6829 6.899393 TCAGTTATTTCAAGGCAGTTTCAT 57.101 33.333 0.00 0.00 0.00 2.57
4015 6830 6.680810 TCAGTTATTTCAAGGCAGTTTCATG 58.319 36.000 0.00 0.00 0.00 3.07
4016 6831 6.265196 TCAGTTATTTCAAGGCAGTTTCATGT 59.735 34.615 0.00 0.00 0.00 3.21
4017 6832 6.364165 CAGTTATTTCAAGGCAGTTTCATGTG 59.636 38.462 0.00 0.00 0.00 3.21
4018 6833 3.731652 TTTCAAGGCAGTTTCATGTGG 57.268 42.857 0.00 0.00 0.00 4.17
4019 6834 0.961019 TCAAGGCAGTTTCATGTGGC 59.039 50.000 0.00 0.00 39.48 5.01
4020 6835 0.037975 CAAGGCAGTTTCATGTGGCC 60.038 55.000 0.00 0.00 44.92 5.36
4021 6836 0.469705 AAGGCAGTTTCATGTGGCCA 60.470 50.000 0.00 0.00 46.96 5.36
4022 6837 0.251922 AGGCAGTTTCATGTGGCCAT 60.252 50.000 9.72 0.00 46.96 4.40
4023 6838 1.005805 AGGCAGTTTCATGTGGCCATA 59.994 47.619 9.72 6.71 46.96 2.74
4024 6839 2.034124 GGCAGTTTCATGTGGCCATAT 58.966 47.619 9.72 9.63 44.01 1.78
4025 6840 3.117550 AGGCAGTTTCATGTGGCCATATA 60.118 43.478 15.40 1.90 46.96 0.86
4026 6841 3.636300 GGCAGTTTCATGTGGCCATATAA 59.364 43.478 15.40 4.05 44.01 0.98
4027 6842 4.099266 GGCAGTTTCATGTGGCCATATAAA 59.901 41.667 15.40 3.97 44.01 1.40
4028 6843 5.043248 GCAGTTTCATGTGGCCATATAAAC 58.957 41.667 24.01 24.01 36.89 2.01
4029 6844 5.273170 CAGTTTCATGTGGCCATATAAACG 58.727 41.667 24.48 19.63 39.15 3.60
4030 6845 5.065859 CAGTTTCATGTGGCCATATAAACGA 59.934 40.000 24.48 14.70 39.15 3.85
4031 6846 5.650266 AGTTTCATGTGGCCATATAAACGAA 59.350 36.000 24.48 18.12 39.15 3.85
4032 6847 5.749596 TTCATGTGGCCATATAAACGAAG 57.250 39.130 15.40 0.97 0.00 3.79
4033 6848 4.133820 TCATGTGGCCATATAAACGAAGG 58.866 43.478 15.40 0.21 0.00 3.46
4034 6849 3.637911 TGTGGCCATATAAACGAAGGT 57.362 42.857 9.72 0.00 0.00 3.50
4035 6850 4.757019 TGTGGCCATATAAACGAAGGTA 57.243 40.909 9.72 0.00 0.00 3.08
4036 6851 4.444536 TGTGGCCATATAAACGAAGGTAC 58.555 43.478 9.72 0.00 0.00 3.34
4037 6852 4.081031 TGTGGCCATATAAACGAAGGTACA 60.081 41.667 9.72 0.00 0.00 2.90
4038 6853 5.061179 GTGGCCATATAAACGAAGGTACAT 58.939 41.667 9.72 0.00 0.00 2.29
4039 6854 5.529800 GTGGCCATATAAACGAAGGTACATT 59.470 40.000 9.72 0.00 0.00 2.71
4040 6855 5.529430 TGGCCATATAAACGAAGGTACATTG 59.471 40.000 0.00 0.00 0.00 2.82
4041 6856 5.761234 GGCCATATAAACGAAGGTACATTGA 59.239 40.000 0.00 0.00 0.00 2.57
4042 6857 6.430000 GGCCATATAAACGAAGGTACATTGAT 59.570 38.462 0.00 0.00 0.00 2.57
4043 6858 7.604927 GGCCATATAAACGAAGGTACATTGATA 59.395 37.037 0.00 0.00 0.00 2.15
4044 6859 8.656849 GCCATATAAACGAAGGTACATTGATAG 58.343 37.037 0.00 0.00 0.00 2.08
4045 6860 9.151471 CCATATAAACGAAGGTACATTGATAGG 57.849 37.037 0.00 0.00 0.00 2.57
4046 6861 8.656849 CATATAAACGAAGGTACATTGATAGGC 58.343 37.037 0.00 0.00 0.00 3.93
4047 6862 4.481368 AACGAAGGTACATTGATAGGCA 57.519 40.909 0.00 0.00 0.00 4.75
4048 6863 4.689612 ACGAAGGTACATTGATAGGCAT 57.310 40.909 0.00 0.00 0.00 4.40
4049 6864 4.380531 ACGAAGGTACATTGATAGGCATG 58.619 43.478 0.00 0.00 0.00 4.06
4050 6865 4.100963 ACGAAGGTACATTGATAGGCATGA 59.899 41.667 0.00 0.00 0.00 3.07
4051 6866 5.056480 CGAAGGTACATTGATAGGCATGAA 58.944 41.667 0.00 0.00 0.00 2.57
4052 6867 5.527214 CGAAGGTACATTGATAGGCATGAAA 59.473 40.000 0.00 0.00 0.00 2.69
4053 6868 6.038161 CGAAGGTACATTGATAGGCATGAAAA 59.962 38.462 0.00 0.00 0.00 2.29
4054 6869 7.415095 CGAAGGTACATTGATAGGCATGAAAAA 60.415 37.037 0.00 0.00 0.00 1.94
4055 6870 7.902920 AGGTACATTGATAGGCATGAAAAAT 57.097 32.000 0.00 0.00 0.00 1.82
4056 6871 8.995027 AGGTACATTGATAGGCATGAAAAATA 57.005 30.769 0.00 0.00 0.00 1.40
4057 6872 8.850156 AGGTACATTGATAGGCATGAAAAATAC 58.150 33.333 0.00 0.00 0.00 1.89
4058 6873 8.850156 GGTACATTGATAGGCATGAAAAATACT 58.150 33.333 0.00 0.00 0.00 2.12
4061 6876 8.970020 ACATTGATAGGCATGAAAAATACTTCA 58.030 29.630 0.00 0.00 39.56 3.02
4062 6877 9.806203 CATTGATAGGCATGAAAAATACTTCAA 57.194 29.630 0.00 0.00 38.75 2.69
4063 6878 9.807649 ATTGATAGGCATGAAAAATACTTCAAC 57.192 29.630 0.00 0.00 38.75 3.18
4064 6879 8.579850 TGATAGGCATGAAAAATACTTCAACT 57.420 30.769 0.00 0.00 38.75 3.16
4065 6880 8.677300 TGATAGGCATGAAAAATACTTCAACTC 58.323 33.333 0.00 0.00 38.75 3.01
4066 6881 6.899393 AGGCATGAAAAATACTTCAACTCA 57.101 33.333 0.00 0.00 38.75 3.41
4067 6882 6.917533 AGGCATGAAAAATACTTCAACTCAG 58.082 36.000 0.00 0.00 38.75 3.35
4068 6883 5.574443 GGCATGAAAAATACTTCAACTCAGC 59.426 40.000 0.00 0.00 38.75 4.26
4069 6884 6.385033 GCATGAAAAATACTTCAACTCAGCT 58.615 36.000 0.00 0.00 38.75 4.24
4070 6885 7.362056 GGCATGAAAAATACTTCAACTCAGCTA 60.362 37.037 0.00 0.00 38.75 3.32
4071 6886 7.695618 GCATGAAAAATACTTCAACTCAGCTAG 59.304 37.037 0.00 0.00 38.75 3.42
4072 6887 8.725148 CATGAAAAATACTTCAACTCAGCTAGT 58.275 33.333 0.00 0.00 38.75 2.57
4073 6888 8.087982 TGAAAAATACTTCAACTCAGCTAGTG 57.912 34.615 0.00 0.00 38.88 2.74
4074 6889 7.931407 TGAAAAATACTTCAACTCAGCTAGTGA 59.069 33.333 0.00 0.00 38.88 3.41
4075 6890 7.659652 AAAATACTTCAACTCAGCTAGTGAC 57.340 36.000 0.00 0.00 38.88 3.67
4076 6891 3.669251 ACTTCAACTCAGCTAGTGACC 57.331 47.619 0.00 0.00 38.88 4.02
4077 6892 2.300437 ACTTCAACTCAGCTAGTGACCC 59.700 50.000 0.00 0.00 38.88 4.46
4078 6893 0.888619 TCAACTCAGCTAGTGACCCG 59.111 55.000 0.00 0.00 38.88 5.28
4079 6894 0.888619 CAACTCAGCTAGTGACCCGA 59.111 55.000 0.00 0.00 38.88 5.14
4080 6895 1.272490 CAACTCAGCTAGTGACCCGAA 59.728 52.381 0.00 0.00 38.88 4.30
4081 6896 1.853963 ACTCAGCTAGTGACCCGAAT 58.146 50.000 0.00 0.00 36.93 3.34
4082 6897 1.478510 ACTCAGCTAGTGACCCGAATG 59.521 52.381 0.00 0.00 36.93 2.67
4083 6898 0.824109 TCAGCTAGTGACCCGAATGG 59.176 55.000 0.00 0.00 41.37 3.16
4102 6917 4.363991 TGGGTAAAAGCCAATGCAATTT 57.636 36.364 0.00 0.00 43.74 1.82
4103 6918 4.070716 TGGGTAAAAGCCAATGCAATTTG 58.929 39.130 0.00 0.00 43.74 2.32
4104 6919 3.119884 GGGTAAAAGCCAATGCAATTTGC 60.120 43.478 14.49 14.49 44.59 3.68
4105 6920 5.577351 GGGTAAAAGCCAATGCAATTTGCA 61.577 41.667 25.06 25.06 46.47 4.08
4120 6935 6.554419 GCAATTTGCATCTACTATGTTGTCA 58.446 36.000 16.35 0.00 44.26 3.58
4121 6936 6.690098 GCAATTTGCATCTACTATGTTGTCAG 59.310 38.462 16.35 0.00 44.26 3.51
4122 6937 7.414429 GCAATTTGCATCTACTATGTTGTCAGA 60.414 37.037 16.35 0.00 44.26 3.27
4123 6938 7.783090 ATTTGCATCTACTATGTTGTCAGAG 57.217 36.000 0.00 0.00 38.66 3.35
4124 6939 5.921962 TGCATCTACTATGTTGTCAGAGT 57.078 39.130 1.42 1.42 46.08 3.24
4125 6940 6.286240 TGCATCTACTATGTTGTCAGAGTT 57.714 37.500 1.06 0.00 42.48 3.01
4126 6941 6.101997 TGCATCTACTATGTTGTCAGAGTTG 58.898 40.000 1.06 0.42 42.48 3.16
4127 6942 5.521735 GCATCTACTATGTTGTCAGAGTTGG 59.478 44.000 1.06 0.00 42.48 3.77
4128 6943 5.661056 TCTACTATGTTGTCAGAGTTGGG 57.339 43.478 1.06 0.00 42.48 4.12
4129 6944 3.059352 ACTATGTTGTCAGAGTTGGGC 57.941 47.619 0.00 0.00 42.48 5.36
4130 6945 2.639839 ACTATGTTGTCAGAGTTGGGCT 59.360 45.455 0.00 0.00 42.48 5.19
4131 6946 2.191128 ATGTTGTCAGAGTTGGGCTC 57.809 50.000 0.00 0.00 44.45 4.70
4132 6947 0.836606 TGTTGTCAGAGTTGGGCTCA 59.163 50.000 0.00 0.00 46.47 4.26
4133 6948 1.211703 TGTTGTCAGAGTTGGGCTCAA 59.788 47.619 0.00 0.00 46.47 3.02
4134 6949 2.158623 TGTTGTCAGAGTTGGGCTCAAT 60.159 45.455 0.27 0.00 46.47 2.57
4135 6950 2.887152 GTTGTCAGAGTTGGGCTCAATT 59.113 45.455 0.27 0.00 46.47 2.32
4136 6951 2.507484 TGTCAGAGTTGGGCTCAATTG 58.493 47.619 0.27 1.98 46.47 2.32
4137 6952 2.106338 TGTCAGAGTTGGGCTCAATTGA 59.894 45.455 0.27 8.12 46.47 2.57
4138 6953 3.149196 GTCAGAGTTGGGCTCAATTGAA 58.851 45.455 9.88 0.00 46.47 2.69
4139 6954 3.190118 GTCAGAGTTGGGCTCAATTGAAG 59.810 47.826 9.88 5.19 46.47 3.02
4140 6955 2.094854 CAGAGTTGGGCTCAATTGAAGC 60.095 50.000 9.88 14.11 46.47 3.86
4141 6956 2.165998 GAGTTGGGCTCAATTGAAGCT 58.834 47.619 21.34 10.60 43.58 3.74
4142 6957 3.009473 AGAGTTGGGCTCAATTGAAGCTA 59.991 43.478 21.34 12.78 46.47 3.32
4143 6958 3.758554 GAGTTGGGCTCAATTGAAGCTAA 59.241 43.478 21.34 16.16 43.58 3.09
4144 6959 4.151883 AGTTGGGCTCAATTGAAGCTAAA 58.848 39.130 21.34 15.57 35.10 1.85
4145 6960 4.588528 AGTTGGGCTCAATTGAAGCTAAAA 59.411 37.500 21.34 13.95 35.10 1.52
4146 6961 4.789012 TGGGCTCAATTGAAGCTAAAAG 57.211 40.909 21.34 6.35 0.00 2.27
4147 6962 4.151883 TGGGCTCAATTGAAGCTAAAAGT 58.848 39.130 21.34 0.00 0.00 2.66
4148 6963 4.218417 TGGGCTCAATTGAAGCTAAAAGTC 59.782 41.667 21.34 6.51 0.00 3.01
4149 6964 4.380973 GGGCTCAATTGAAGCTAAAAGTCC 60.381 45.833 21.34 10.93 0.00 3.85
4150 6965 4.460731 GGCTCAATTGAAGCTAAAAGTCCT 59.539 41.667 21.34 0.00 0.00 3.85
4151 6966 5.047731 GGCTCAATTGAAGCTAAAAGTCCTT 60.048 40.000 21.34 0.00 0.00 3.36
4152 6967 6.089476 GCTCAATTGAAGCTAAAAGTCCTTC 58.911 40.000 9.88 0.00 36.42 3.46
4153 6968 6.294176 GCTCAATTGAAGCTAAAAGTCCTTCA 60.294 38.462 9.88 0.00 42.12 3.02
4154 6969 7.576477 GCTCAATTGAAGCTAAAAGTCCTTCAT 60.576 37.037 9.88 0.00 42.97 2.57
4155 6970 8.181904 TCAATTGAAGCTAAAAGTCCTTCATT 57.818 30.769 5.45 0.00 42.97 2.57
4156 6971 9.295825 TCAATTGAAGCTAAAAGTCCTTCATTA 57.704 29.630 5.45 0.00 42.97 1.90
4157 6972 9.346725 CAATTGAAGCTAAAAGTCCTTCATTAC 57.653 33.333 0.00 0.00 42.97 1.89
4158 6973 8.635765 ATTGAAGCTAAAAGTCCTTCATTACA 57.364 30.769 3.50 0.00 42.97 2.41
4159 6974 8.635765 TTGAAGCTAAAAGTCCTTCATTACAT 57.364 30.769 3.50 0.00 42.97 2.29
4160 6975 8.044060 TGAAGCTAAAAGTCCTTCATTACATG 57.956 34.615 0.00 0.00 39.80 3.21
4161 6976 7.121168 TGAAGCTAAAAGTCCTTCATTACATGG 59.879 37.037 0.00 0.00 39.80 3.66
4162 6977 5.358160 AGCTAAAAGTCCTTCATTACATGGC 59.642 40.000 0.00 0.00 0.00 4.40
4163 6978 5.358160 GCTAAAAGTCCTTCATTACATGGCT 59.642 40.000 0.00 0.00 0.00 4.75
4164 6979 5.649782 AAAAGTCCTTCATTACATGGCTG 57.350 39.130 0.00 0.00 0.00 4.85
4165 6980 4.307032 AAGTCCTTCATTACATGGCTGT 57.693 40.909 0.00 0.00 39.49 4.40
4166 6981 5.435686 AAGTCCTTCATTACATGGCTGTA 57.564 39.130 0.00 0.00 36.79 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
145 146 4.042809 TGTGGTTCAGATATGGTCTTTGGT 59.957 41.667 0.00 0.00 34.00 3.67
146 147 4.588899 TGTGGTTCAGATATGGTCTTTGG 58.411 43.478 0.00 0.00 34.00 3.28
237 239 1.608590 CCCAACGAGTTTGAAGCACAT 59.391 47.619 0.00 0.00 37.39 3.21
297 299 3.921119 CTGTTATCAGCTGCCACAAAA 57.079 42.857 9.47 0.00 34.79 2.44
348 352 2.093973 GTCTACACCATCACCCTCACTG 60.094 54.545 0.00 0.00 0.00 3.66
349 353 2.180276 GTCTACACCATCACCCTCACT 58.820 52.381 0.00 0.00 0.00 3.41
368 372 4.815846 GTGCTTCAAAATCATTGGTTTGGT 59.184 37.500 0.00 0.00 35.79 3.67
466 473 6.127451 TGTGTGTGTACCTGATAATCTCGAAT 60.127 38.462 0.00 0.00 0.00 3.34
475 482 4.341487 AGTAGCTGTGTGTGTACCTGATA 58.659 43.478 0.00 0.00 0.00 2.15
540 548 6.194796 TGCACAACTCAAATATTAGCTTCC 57.805 37.500 0.00 0.00 0.00 3.46
600 610 6.477033 GCACACAAATAACAAATGTTGGTACA 59.523 34.615 8.99 0.00 35.30 2.90
620 630 1.202203 TACAAGTCAACGTCGCACAC 58.798 50.000 0.00 0.00 0.00 3.82
629 639 4.025229 TGCACGTTGATCTTACAAGTCAAC 60.025 41.667 17.87 17.87 45.00 3.18
640 650 4.696877 TCTCAAATTCATGCACGTTGATCT 59.303 37.500 0.00 0.00 0.00 2.75
681 711 8.708378 TCTTCATATTTCACACCTGACATCTAT 58.292 33.333 0.00 0.00 0.00 1.98
693 736 7.773489 TTCAAATGGGTCTTCATATTTCACA 57.227 32.000 0.00 0.00 0.00 3.58
707 750 0.527565 GCGACTGCATTCAAATGGGT 59.472 50.000 4.82 0.00 42.15 4.51
742 786 1.105457 CCCCTATACGTCCGTGAACA 58.895 55.000 1.98 0.00 0.00 3.18
747 791 0.107214 TTCGACCCCTATACGTCCGT 60.107 55.000 0.00 0.00 0.00 4.69
793 840 2.364632 AGGTGAGACGAGTGAGATCTG 58.635 52.381 0.00 0.00 0.00 2.90
810 857 7.376615 GTTTATATATTGTCGGAGCACTAGGT 58.623 38.462 0.00 0.00 0.00 3.08
822 869 6.170506 TGCGATGGAGGGTTTATATATTGTC 58.829 40.000 0.00 0.00 0.00 3.18
854 901 5.699458 CGTCCTGCCGGATTTATATAACTTT 59.301 40.000 5.05 0.00 42.43 2.66
876 925 0.182775 AGAAAAGTTGAGGGTGCCGT 59.817 50.000 0.00 0.00 0.00 5.68
1197 1287 1.446272 GTACTTCTTCGCCAGCGCT 60.446 57.895 2.64 2.64 39.59 5.92
1610 1706 1.266175 TGTCGACGAACTCTTCCTGTC 59.734 52.381 11.62 0.00 0.00 3.51
1624 1720 1.135333 GAACTCCTGGAGGATGTCGAC 59.865 57.143 26.56 9.11 44.46 4.20
1628 1724 1.872773 GGAGAACTCCTGGAGGATGT 58.127 55.000 26.56 13.99 46.16 3.06
1677 1773 1.377202 GCTGAGCCACGGGATGAAA 60.377 57.895 0.00 0.00 0.00 2.69
1794 1890 2.914097 ACGTCGTCGGGGTTCCTT 60.914 61.111 7.05 0.00 41.85 3.36
1943 2039 6.246163 TGGATCTACTACGTACCATCATCAT 58.754 40.000 0.00 0.00 0.00 2.45
1944 2040 5.627135 TGGATCTACTACGTACCATCATCA 58.373 41.667 0.00 0.00 0.00 3.07
1945 2041 6.570672 TTGGATCTACTACGTACCATCATC 57.429 41.667 1.62 0.00 0.00 2.92
1946 2042 6.550108 AGTTTGGATCTACTACGTACCATCAT 59.450 38.462 1.62 0.00 0.00 2.45
1947 2043 5.889853 AGTTTGGATCTACTACGTACCATCA 59.110 40.000 1.62 0.00 0.00 3.07
1948 2044 6.388435 AGTTTGGATCTACTACGTACCATC 57.612 41.667 1.62 0.15 0.00 3.51
1949 2045 6.183360 GGAAGTTTGGATCTACTACGTACCAT 60.183 42.308 1.62 0.00 0.00 3.55
1978 2074 5.448632 GGCGCATATATGGCAGTAAATAACC 60.449 44.000 20.68 0.25 0.00 2.85
1979 2075 5.123186 TGGCGCATATATGGCAGTAAATAAC 59.877 40.000 20.68 7.13 35.55 1.89
2106 2216 9.659830 CGTTATTATTTGGGATAAGTAAACAGC 57.340 33.333 0.00 0.00 0.00 4.40
2114 2229 7.441157 TGTCAGAGCGTTATTATTTGGGATAAG 59.559 37.037 0.00 0.00 0.00 1.73
2119 2234 4.876107 AGTGTCAGAGCGTTATTATTTGGG 59.124 41.667 0.00 0.00 0.00 4.12
2120 2235 6.422776 AAGTGTCAGAGCGTTATTATTTGG 57.577 37.500 0.00 0.00 0.00 3.28
2124 2239 9.811995 TGTTAATAAGTGTCAGAGCGTTATTAT 57.188 29.630 0.00 0.00 29.86 1.28
2126 2241 7.201410 CGTGTTAATAAGTGTCAGAGCGTTATT 60.201 37.037 0.00 0.00 0.00 1.40
2127 2242 6.252869 CGTGTTAATAAGTGTCAGAGCGTTAT 59.747 38.462 0.00 0.00 0.00 1.89
2128 2243 5.570206 CGTGTTAATAAGTGTCAGAGCGTTA 59.430 40.000 0.00 0.00 0.00 3.18
2129 2244 4.384846 CGTGTTAATAAGTGTCAGAGCGTT 59.615 41.667 0.00 0.00 0.00 4.84
2130 2245 3.918591 CGTGTTAATAAGTGTCAGAGCGT 59.081 43.478 0.00 0.00 0.00 5.07
2131 2246 3.241678 GCGTGTTAATAAGTGTCAGAGCG 60.242 47.826 0.00 0.00 0.00 5.03
2132 2247 3.927142 AGCGTGTTAATAAGTGTCAGAGC 59.073 43.478 0.00 0.00 0.00 4.09
2133 2248 5.061064 GTGAGCGTGTTAATAAGTGTCAGAG 59.939 44.000 0.00 0.00 0.00 3.35
2134 2249 4.921515 GTGAGCGTGTTAATAAGTGTCAGA 59.078 41.667 0.00 0.00 0.00 3.27
2135 2250 4.684242 TGTGAGCGTGTTAATAAGTGTCAG 59.316 41.667 0.00 0.00 0.00 3.51
2136 2251 4.446385 GTGTGAGCGTGTTAATAAGTGTCA 59.554 41.667 0.00 0.00 0.00 3.58
2137 2252 4.684703 AGTGTGAGCGTGTTAATAAGTGTC 59.315 41.667 0.00 0.00 0.00 3.67
2138 2253 4.628074 AGTGTGAGCGTGTTAATAAGTGT 58.372 39.130 0.00 0.00 0.00 3.55
2139 2254 4.684242 TGAGTGTGAGCGTGTTAATAAGTG 59.316 41.667 0.00 0.00 0.00 3.16
2140 2255 4.684703 GTGAGTGTGAGCGTGTTAATAAGT 59.315 41.667 0.00 0.00 0.00 2.24
2141 2256 4.684242 TGTGAGTGTGAGCGTGTTAATAAG 59.316 41.667 0.00 0.00 0.00 1.73
2142 2257 4.623002 TGTGAGTGTGAGCGTGTTAATAA 58.377 39.130 0.00 0.00 0.00 1.40
2143 2258 4.022676 TCTGTGAGTGTGAGCGTGTTAATA 60.023 41.667 0.00 0.00 0.00 0.98
2144 2259 3.059884 CTGTGAGTGTGAGCGTGTTAAT 58.940 45.455 0.00 0.00 0.00 1.40
2145 2260 2.100087 TCTGTGAGTGTGAGCGTGTTAA 59.900 45.455 0.00 0.00 0.00 2.01
2146 2261 1.679153 TCTGTGAGTGTGAGCGTGTTA 59.321 47.619 0.00 0.00 0.00 2.41
2147 2262 0.459899 TCTGTGAGTGTGAGCGTGTT 59.540 50.000 0.00 0.00 0.00 3.32
2148 2263 0.249073 GTCTGTGAGTGTGAGCGTGT 60.249 55.000 0.00 0.00 0.00 4.49
2149 2264 0.249031 TGTCTGTGAGTGTGAGCGTG 60.249 55.000 0.00 0.00 0.00 5.34
2150 2265 0.676184 ATGTCTGTGAGTGTGAGCGT 59.324 50.000 0.00 0.00 0.00 5.07
2151 2266 2.636768 TATGTCTGTGAGTGTGAGCG 57.363 50.000 0.00 0.00 0.00 5.03
2152 2267 3.549471 CGAATATGTCTGTGAGTGTGAGC 59.451 47.826 0.00 0.00 0.00 4.26
2153 2268 4.986622 TCGAATATGTCTGTGAGTGTGAG 58.013 43.478 0.00 0.00 0.00 3.51
2154 2269 5.343249 CATCGAATATGTCTGTGAGTGTGA 58.657 41.667 0.00 0.00 0.00 3.58
2155 2270 4.026228 GCATCGAATATGTCTGTGAGTGTG 60.026 45.833 0.00 0.00 0.00 3.82
2156 2271 4.115516 GCATCGAATATGTCTGTGAGTGT 58.884 43.478 0.00 0.00 0.00 3.55
2157 2272 3.492383 GGCATCGAATATGTCTGTGAGTG 59.508 47.826 0.00 0.00 0.00 3.51
2158 2273 3.722147 GGCATCGAATATGTCTGTGAGT 58.278 45.455 0.00 0.00 0.00 3.41
2159 2274 2.728318 CGGCATCGAATATGTCTGTGAG 59.272 50.000 0.00 0.00 39.00 3.51
2160 2275 2.100749 ACGGCATCGAATATGTCTGTGA 59.899 45.455 0.00 0.00 40.11 3.58
2161 2276 2.473816 ACGGCATCGAATATGTCTGTG 58.526 47.619 0.00 0.00 40.11 3.66
2162 2277 2.890808 ACGGCATCGAATATGTCTGT 57.109 45.000 0.00 0.00 40.11 3.41
2163 2278 2.153817 CGAACGGCATCGAATATGTCTG 59.846 50.000 3.83 0.00 45.48 3.51
2164 2279 2.394708 CGAACGGCATCGAATATGTCT 58.605 47.619 3.83 0.00 45.48 3.41
2165 2280 2.837337 CGAACGGCATCGAATATGTC 57.163 50.000 3.83 0.00 45.48 3.06
2193 2309 3.115554 GCAACTGCTTCAAAATTCGTGT 58.884 40.909 0.00 0.00 38.21 4.49
2221 2346 1.405933 CGACATTGGATGCTCAGGTGA 60.406 52.381 0.00 0.00 0.00 4.02
2225 2350 1.395954 CACACGACATTGGATGCTCAG 59.604 52.381 0.00 0.00 0.00 3.35
2227 2352 0.729116 CCACACGACATTGGATGCTC 59.271 55.000 0.00 0.00 34.46 4.26
2254 2379 7.485810 AGCGTACATATGTGTGACACTAAATA 58.514 34.615 18.81 6.97 39.39 1.40
2297 2422 0.459899 ACGTTCAGGCGAGCATCATA 59.540 50.000 0.00 0.00 35.59 2.15
2299 2424 1.737735 CACGTTCAGGCGAGCATCA 60.738 57.895 0.00 0.00 35.59 3.07
2310 2436 1.282817 CAGTTTCGTCCACACGTTCA 58.717 50.000 0.00 0.00 46.76 3.18
2321 2447 0.468226 TGGGTGAAGAGCAGTTTCGT 59.532 50.000 0.00 0.00 0.00 3.85
2343 2494 3.326836 TTTATCACCGTGTGAGCATCA 57.673 42.857 11.50 0.00 46.04 3.07
2346 2497 2.355197 CCATTTATCACCGTGTGAGCA 58.645 47.619 11.50 1.47 46.04 4.26
2362 2513 0.883833 GCACAGCTGTAGTTGCCATT 59.116 50.000 21.20 0.00 0.00 3.16
2376 2527 4.906065 AATAGTTGCCACATATGCACAG 57.094 40.909 1.58 0.00 38.72 3.66
2396 2547 5.555966 TCATAGTTGCCATGTGTGACTAAA 58.444 37.500 0.00 0.00 0.00 1.85
2400 2551 4.395854 TCAATCATAGTTGCCATGTGTGAC 59.604 41.667 0.00 0.00 0.00 3.67
2408 2559 4.587891 TGTGTGATCAATCATAGTTGCCA 58.412 39.130 0.00 0.00 39.30 4.92
2453 2628 1.682323 TGCACACCTGTAGTTGTCGTA 59.318 47.619 0.00 0.00 0.00 3.43
2480 2666 3.744426 GCCGTGTGTGATTAACTAGTTGT 59.256 43.478 18.56 6.71 0.00 3.32
2569 2844 8.960591 GCCATGTATCATTAAATATAGTTGCCT 58.039 33.333 0.00 0.00 0.00 4.75
2596 2871 5.727791 GCAATTAACTCTAGTTGCCATGTCG 60.728 44.000 5.62 0.00 42.15 4.35
2671 2948 2.108250 ACCCTTTGTGGCAACTACTCAT 59.892 45.455 0.00 0.00 37.61 2.90
2687 2964 1.677552 GATGACCCACACGACCCTT 59.322 57.895 0.00 0.00 0.00 3.95
2775 3052 1.725641 TACGAGTCGTGTGGTCGTAT 58.274 50.000 27.85 0.00 44.77 3.06
2794 3072 3.390967 TGACACAATGGATACCCGATCAT 59.609 43.478 0.00 0.00 36.12 2.45
2832 3110 1.148310 GTCATGAATATGGACGCCGG 58.852 55.000 0.00 0.00 34.97 6.13
2844 3122 3.118445 TCGGTCCATTGCTATGTCATGAA 60.118 43.478 7.37 0.00 0.00 2.57
2845 3123 2.433970 TCGGTCCATTGCTATGTCATGA 59.566 45.455 7.37 0.00 0.00 3.07
2846 3124 2.804527 CTCGGTCCATTGCTATGTCATG 59.195 50.000 7.37 0.00 0.00 3.07
2856 3134 5.183140 AGTTTTAAATCCACTCGGTCCATTG 59.817 40.000 0.00 0.00 0.00 2.82
3075 5825 7.537649 CACGTCCTGTCATACATACATACATAC 59.462 40.741 0.00 0.00 0.00 2.39
3077 5827 6.264518 TCACGTCCTGTCATACATACATACAT 59.735 38.462 0.00 0.00 0.00 2.29
3079 5829 6.068473 TCACGTCCTGTCATACATACATAC 57.932 41.667 0.00 0.00 0.00 2.39
3081 5831 5.069119 ACATCACGTCCTGTCATACATACAT 59.931 40.000 0.00 0.00 0.00 2.29
3204 5995 2.438975 ATCGAGACCCACCGCGTA 60.439 61.111 4.92 0.00 0.00 4.42
3207 5998 4.570663 CCGATCGAGACCCACCGC 62.571 72.222 18.66 0.00 0.00 5.68
3245 6036 2.568546 TGAGGAAGGGGAGCTTATCA 57.431 50.000 0.00 0.00 0.00 2.15
3317 6108 6.550938 ACACAATCCTCAGTATTCTCATGA 57.449 37.500 0.00 0.00 0.00 3.07
3327 6118 0.243907 CCGACGACACAATCCTCAGT 59.756 55.000 0.00 0.00 0.00 3.41
3431 6222 3.698250 CCTTGAAGGTCGGAACACA 57.302 52.632 2.25 0.00 0.00 3.72
3478 6269 2.657237 CGCCCTTGAAGTCGACCT 59.343 61.111 13.01 0.00 0.00 3.85
3535 6326 1.972198 CTCCAACGAGTACAGGCCA 59.028 57.895 5.01 0.00 0.00 5.36
3684 6494 2.601666 AGCAGGTGAGTCGAGGCA 60.602 61.111 0.00 0.00 0.00 4.75
3725 6536 1.746615 GACATCATGCCTGGTGCGT 60.747 57.895 1.71 0.00 45.60 5.24
3772 6583 1.095228 CCACCAAACTCGTGCAGTGT 61.095 55.000 0.00 0.00 34.56 3.55
3776 6587 1.034838 AAAGCCACCAAACTCGTGCA 61.035 50.000 0.00 0.00 0.00 4.57
3780 6591 1.884235 AGAGAAAGCCACCAAACTCG 58.116 50.000 0.00 0.00 0.00 4.18
3792 6603 5.069318 AGGAGAAAGAAGGCAAAGAGAAAG 58.931 41.667 0.00 0.00 0.00 2.62
3839 6653 7.658982 AGCTAAGCATTGAAGATCGAATTATCA 59.341 33.333 0.00 0.00 0.00 2.15
3840 6654 8.027440 AGCTAAGCATTGAAGATCGAATTATC 57.973 34.615 0.00 0.00 0.00 1.75
3847 6661 5.750547 TCTGTAAGCTAAGCATTGAAGATCG 59.249 40.000 0.00 0.00 0.00 3.69
3855 6669 5.152623 TCACACTCTGTAAGCTAAGCATT 57.847 39.130 0.00 0.00 0.00 3.56
3896 6711 0.597637 CGCGCGGGAAATCATCTAGT 60.598 55.000 24.84 0.00 0.00 2.57
3897 6712 0.597637 ACGCGCGGGAAATCATCTAG 60.598 55.000 35.22 0.47 0.00 2.43
3898 6713 0.179094 AACGCGCGGGAAATCATCTA 60.179 50.000 35.22 0.00 0.00 1.98
3899 6714 1.449601 AACGCGCGGGAAATCATCT 60.450 52.632 35.22 5.42 0.00 2.90
3900 6715 1.297598 CAACGCGCGGGAAATCATC 60.298 57.895 35.22 0.00 0.00 2.92
3901 6716 2.791256 CAACGCGCGGGAAATCAT 59.209 55.556 35.22 7.19 0.00 2.45
3902 6717 4.096558 GCAACGCGCGGGAAATCA 62.097 61.111 35.22 0.00 0.00 2.57
3913 6728 4.166011 GGATGTCCGCAGCAACGC 62.166 66.667 0.00 0.00 31.62 4.84
3914 6729 2.034879 AAGGATGTCCGCAGCAACG 61.035 57.895 0.00 0.00 42.08 4.10
3915 6730 1.237285 ACAAGGATGTCCGCAGCAAC 61.237 55.000 0.00 0.00 42.08 4.17
3916 6731 0.323302 TACAAGGATGTCCGCAGCAA 59.677 50.000 0.00 0.00 41.05 3.91
3917 6732 0.391130 GTACAAGGATGTCCGCAGCA 60.391 55.000 0.00 0.00 41.05 4.41
3918 6733 0.391130 TGTACAAGGATGTCCGCAGC 60.391 55.000 0.00 0.00 41.05 5.25
3919 6734 1.732259 GTTGTACAAGGATGTCCGCAG 59.268 52.381 8.98 0.00 41.05 5.18
3920 6735 1.346395 AGTTGTACAAGGATGTCCGCA 59.654 47.619 8.98 0.00 41.05 5.69
3921 6736 2.094762 AGTTGTACAAGGATGTCCGC 57.905 50.000 8.98 0.00 41.05 5.54
3922 6737 2.159627 GCAAGTTGTACAAGGATGTCCG 59.840 50.000 8.98 0.00 41.05 4.79
3923 6738 3.412386 AGCAAGTTGTACAAGGATGTCC 58.588 45.455 8.98 0.00 41.05 4.02
3924 6739 7.843490 TTATAGCAAGTTGTACAAGGATGTC 57.157 36.000 8.98 5.34 41.05 3.06
3925 6740 8.807948 ATTTATAGCAAGTTGTACAAGGATGT 57.192 30.769 8.98 1.87 43.74 3.06
3928 6743 9.290988 TCAAATTTATAGCAAGTTGTACAAGGA 57.709 29.630 8.98 0.00 34.18 3.36
3935 6750 8.592809 TGGGAAATCAAATTTATAGCAAGTTGT 58.407 29.630 4.48 0.00 34.18 3.32
3936 6751 8.872845 GTGGGAAATCAAATTTATAGCAAGTTG 58.127 33.333 0.00 0.00 33.88 3.16
3937 6752 8.592809 TGTGGGAAATCAAATTTATAGCAAGTT 58.407 29.630 0.00 0.00 31.47 2.66
3938 6753 8.133024 TGTGGGAAATCAAATTTATAGCAAGT 57.867 30.769 0.00 0.00 31.47 3.16
3939 6754 8.469200 TCTGTGGGAAATCAAATTTATAGCAAG 58.531 33.333 0.00 0.00 31.47 4.01
3940 6755 8.359875 TCTGTGGGAAATCAAATTTATAGCAA 57.640 30.769 0.00 0.00 31.47 3.91
3941 6756 7.953005 TCTGTGGGAAATCAAATTTATAGCA 57.047 32.000 0.00 0.00 31.47 3.49
3942 6757 9.305925 CTTTCTGTGGGAAATCAAATTTATAGC 57.694 33.333 0.00 0.00 42.25 2.97
3945 6760 9.492973 CAACTTTCTGTGGGAAATCAAATTTAT 57.507 29.630 0.00 0.00 42.25 1.40
3946 6761 8.700051 TCAACTTTCTGTGGGAAATCAAATTTA 58.300 29.630 0.00 0.00 42.25 1.40
3947 6762 7.563906 TCAACTTTCTGTGGGAAATCAAATTT 58.436 30.769 0.00 0.00 42.25 1.82
3948 6763 7.123355 TCAACTTTCTGTGGGAAATCAAATT 57.877 32.000 0.00 0.00 42.25 1.82
3949 6764 6.729690 TCAACTTTCTGTGGGAAATCAAAT 57.270 33.333 0.00 0.00 42.25 2.32
3950 6765 6.537453 TTCAACTTTCTGTGGGAAATCAAA 57.463 33.333 0.00 0.00 42.25 2.69
3951 6766 6.323482 TGATTCAACTTTCTGTGGGAAATCAA 59.677 34.615 0.00 0.00 42.25 2.57
3952 6767 5.832595 TGATTCAACTTTCTGTGGGAAATCA 59.167 36.000 0.00 0.00 42.25 2.57
3953 6768 6.331369 TGATTCAACTTTCTGTGGGAAATC 57.669 37.500 0.00 0.00 42.25 2.17
3954 6769 6.923199 ATGATTCAACTTTCTGTGGGAAAT 57.077 33.333 0.00 0.00 42.25 2.17
3955 6770 6.323482 TCAATGATTCAACTTTCTGTGGGAAA 59.677 34.615 0.00 0.00 41.11 3.13
3956 6771 5.832595 TCAATGATTCAACTTTCTGTGGGAA 59.167 36.000 0.00 0.00 0.00 3.97
3957 6772 5.384336 TCAATGATTCAACTTTCTGTGGGA 58.616 37.500 0.00 0.00 0.00 4.37
3958 6773 5.710513 TCAATGATTCAACTTTCTGTGGG 57.289 39.130 0.00 0.00 0.00 4.61
3959 6774 6.742109 ACTTCAATGATTCAACTTTCTGTGG 58.258 36.000 0.00 0.00 0.00 4.17
3960 6775 7.590322 CAGACTTCAATGATTCAACTTTCTGTG 59.410 37.037 0.00 0.00 0.00 3.66
3961 6776 7.646314 CAGACTTCAATGATTCAACTTTCTGT 58.354 34.615 0.00 0.00 0.00 3.41
3962 6777 6.581542 GCAGACTTCAATGATTCAACTTTCTG 59.418 38.462 0.00 0.55 0.00 3.02
3963 6778 6.263842 TGCAGACTTCAATGATTCAACTTTCT 59.736 34.615 0.00 0.00 0.00 2.52
3964 6779 6.441274 TGCAGACTTCAATGATTCAACTTTC 58.559 36.000 0.00 0.00 0.00 2.62
3965 6780 6.395426 TGCAGACTTCAATGATTCAACTTT 57.605 33.333 0.00 0.00 0.00 2.66
3966 6781 6.395426 TTGCAGACTTCAATGATTCAACTT 57.605 33.333 0.00 0.00 0.00 2.66
3967 6782 6.395426 TTTGCAGACTTCAATGATTCAACT 57.605 33.333 0.00 0.00 0.00 3.16
3968 6783 6.864685 TGATTTGCAGACTTCAATGATTCAAC 59.135 34.615 0.00 0.00 0.00 3.18
3969 6784 6.983984 TGATTTGCAGACTTCAATGATTCAA 58.016 32.000 0.00 0.00 0.00 2.69
3970 6785 6.578163 TGATTTGCAGACTTCAATGATTCA 57.422 33.333 0.00 0.00 0.00 2.57
3982 6797 8.520110 CTGCCTTGAAATAACTGATTTGCAGAC 61.520 40.741 11.64 0.00 45.18 3.51
3983 6798 6.570957 CTGCCTTGAAATAACTGATTTGCAGA 60.571 38.462 11.64 0.00 45.18 4.26
3984 6799 6.792239 ACTGCCTTGAAATAACTGATTTGCAG 60.792 38.462 13.94 13.94 46.40 4.41
3985 6800 5.010922 ACTGCCTTGAAATAACTGATTTGCA 59.989 36.000 0.00 0.00 37.90 4.08
3986 6801 5.473039 ACTGCCTTGAAATAACTGATTTGC 58.527 37.500 0.00 0.00 37.90 3.68
3987 6802 7.652909 TGAAACTGCCTTGAAATAACTGATTTG 59.347 33.333 0.00 0.00 37.90 2.32
3988 6803 7.725251 TGAAACTGCCTTGAAATAACTGATTT 58.275 30.769 0.00 0.00 40.62 2.17
3989 6804 7.288810 TGAAACTGCCTTGAAATAACTGATT 57.711 32.000 0.00 0.00 0.00 2.57
3990 6805 6.899393 TGAAACTGCCTTGAAATAACTGAT 57.101 33.333 0.00 0.00 0.00 2.90
3991 6806 6.265196 ACATGAAACTGCCTTGAAATAACTGA 59.735 34.615 0.00 0.00 0.00 3.41
3992 6807 6.364165 CACATGAAACTGCCTTGAAATAACTG 59.636 38.462 0.00 0.00 0.00 3.16
3993 6808 6.449698 CACATGAAACTGCCTTGAAATAACT 58.550 36.000 0.00 0.00 0.00 2.24
3994 6809 5.634859 CCACATGAAACTGCCTTGAAATAAC 59.365 40.000 0.00 0.00 0.00 1.89
3995 6810 5.782047 CCACATGAAACTGCCTTGAAATAA 58.218 37.500 0.00 0.00 0.00 1.40
3996 6811 4.321899 GCCACATGAAACTGCCTTGAAATA 60.322 41.667 0.00 0.00 0.00 1.40
3997 6812 3.555586 GCCACATGAAACTGCCTTGAAAT 60.556 43.478 0.00 0.00 0.00 2.17
3998 6813 2.224018 GCCACATGAAACTGCCTTGAAA 60.224 45.455 0.00 0.00 0.00 2.69
3999 6814 1.340889 GCCACATGAAACTGCCTTGAA 59.659 47.619 0.00 0.00 0.00 2.69
4000 6815 0.961019 GCCACATGAAACTGCCTTGA 59.039 50.000 0.00 0.00 0.00 3.02
4001 6816 0.037975 GGCCACATGAAACTGCCTTG 60.038 55.000 0.00 0.00 39.05 3.61
4002 6817 0.469705 TGGCCACATGAAACTGCCTT 60.470 50.000 0.00 0.00 42.62 4.35
4003 6818 0.251922 ATGGCCACATGAAACTGCCT 60.252 50.000 8.16 0.00 42.62 4.75
4004 6819 1.473258 TATGGCCACATGAAACTGCC 58.527 50.000 8.16 4.27 42.49 4.85
4005 6820 4.916983 TTATATGGCCACATGAAACTGC 57.083 40.909 8.16 0.00 37.97 4.40
4006 6821 5.065859 TCGTTTATATGGCCACATGAAACTG 59.934 40.000 22.22 17.68 39.55 3.16
4007 6822 5.189928 TCGTTTATATGGCCACATGAAACT 58.810 37.500 22.22 4.99 39.55 2.66
4008 6823 5.493133 TCGTTTATATGGCCACATGAAAC 57.507 39.130 8.16 15.17 38.98 2.78
4009 6824 5.067153 CCTTCGTTTATATGGCCACATGAAA 59.933 40.000 8.16 3.44 37.97 2.69
4010 6825 4.578516 CCTTCGTTTATATGGCCACATGAA 59.421 41.667 8.16 0.85 37.97 2.57
4011 6826 4.133820 CCTTCGTTTATATGGCCACATGA 58.866 43.478 8.16 0.00 37.97 3.07
4012 6827 3.882888 ACCTTCGTTTATATGGCCACATG 59.117 43.478 8.16 0.00 37.97 3.21
4013 6828 4.164843 ACCTTCGTTTATATGGCCACAT 57.835 40.909 8.16 3.81 41.13 3.21
4014 6829 3.637911 ACCTTCGTTTATATGGCCACA 57.362 42.857 8.16 0.00 0.00 4.17
4015 6830 4.444536 TGTACCTTCGTTTATATGGCCAC 58.555 43.478 8.16 0.00 0.00 5.01
4016 6831 4.757019 TGTACCTTCGTTTATATGGCCA 57.243 40.909 8.56 8.56 0.00 5.36
4017 6832 5.761234 TCAATGTACCTTCGTTTATATGGCC 59.239 40.000 0.00 0.00 0.00 5.36
4018 6833 6.854496 TCAATGTACCTTCGTTTATATGGC 57.146 37.500 0.00 0.00 0.00 4.40
4019 6834 9.151471 CCTATCAATGTACCTTCGTTTATATGG 57.849 37.037 0.00 0.00 0.00 2.74
4020 6835 8.656849 GCCTATCAATGTACCTTCGTTTATATG 58.343 37.037 0.00 0.00 0.00 1.78
4021 6836 8.372459 TGCCTATCAATGTACCTTCGTTTATAT 58.628 33.333 0.00 0.00 0.00 0.86
4022 6837 7.728148 TGCCTATCAATGTACCTTCGTTTATA 58.272 34.615 0.00 0.00 0.00 0.98
4023 6838 6.588204 TGCCTATCAATGTACCTTCGTTTAT 58.412 36.000 0.00 0.00 0.00 1.40
4024 6839 5.979993 TGCCTATCAATGTACCTTCGTTTA 58.020 37.500 0.00 0.00 0.00 2.01
4025 6840 4.839121 TGCCTATCAATGTACCTTCGTTT 58.161 39.130 0.00 0.00 0.00 3.60
4026 6841 4.481368 TGCCTATCAATGTACCTTCGTT 57.519 40.909 0.00 0.00 0.00 3.85
4027 6842 4.100963 TCATGCCTATCAATGTACCTTCGT 59.899 41.667 0.00 0.00 0.00 3.85
4028 6843 4.631131 TCATGCCTATCAATGTACCTTCG 58.369 43.478 0.00 0.00 0.00 3.79
4029 6844 6.942532 TTTCATGCCTATCAATGTACCTTC 57.057 37.500 0.00 0.00 0.00 3.46
4030 6845 7.716799 TTTTTCATGCCTATCAATGTACCTT 57.283 32.000 0.00 0.00 0.00 3.50
4031 6846 7.902920 ATTTTTCATGCCTATCAATGTACCT 57.097 32.000 0.00 0.00 0.00 3.08
4032 6847 8.850156 AGTATTTTTCATGCCTATCAATGTACC 58.150 33.333 0.00 0.00 0.00 3.34
4035 6850 8.970020 TGAAGTATTTTTCATGCCTATCAATGT 58.030 29.630 0.00 0.00 32.39 2.71
4036 6851 9.806203 TTGAAGTATTTTTCATGCCTATCAATG 57.194 29.630 0.00 0.00 36.97 2.82
4037 6852 9.807649 GTTGAAGTATTTTTCATGCCTATCAAT 57.192 29.630 0.00 0.00 36.97 2.57
4038 6853 9.023962 AGTTGAAGTATTTTTCATGCCTATCAA 57.976 29.630 0.00 0.00 36.97 2.57
4039 6854 8.579850 AGTTGAAGTATTTTTCATGCCTATCA 57.420 30.769 0.00 0.00 36.97 2.15
4040 6855 8.677300 TGAGTTGAAGTATTTTTCATGCCTATC 58.323 33.333 0.00 0.00 36.97 2.08
4041 6856 8.579850 TGAGTTGAAGTATTTTTCATGCCTAT 57.420 30.769 0.00 0.00 36.97 2.57
4042 6857 7.362056 GCTGAGTTGAAGTATTTTTCATGCCTA 60.362 37.037 0.00 0.00 36.97 3.93
4043 6858 6.571150 GCTGAGTTGAAGTATTTTTCATGCCT 60.571 38.462 0.00 0.00 36.97 4.75
4044 6859 5.574443 GCTGAGTTGAAGTATTTTTCATGCC 59.426 40.000 0.00 0.00 36.97 4.40
4045 6860 6.385033 AGCTGAGTTGAAGTATTTTTCATGC 58.615 36.000 0.00 0.00 36.97 4.06
4046 6861 8.725148 ACTAGCTGAGTTGAAGTATTTTTCATG 58.275 33.333 0.00 0.00 36.97 3.07
4047 6862 8.725148 CACTAGCTGAGTTGAAGTATTTTTCAT 58.275 33.333 0.00 0.00 35.64 2.57
4048 6863 7.931407 TCACTAGCTGAGTTGAAGTATTTTTCA 59.069 33.333 0.00 0.00 35.64 2.69
4049 6864 8.224437 GTCACTAGCTGAGTTGAAGTATTTTTC 58.776 37.037 0.00 0.00 35.64 2.29
4050 6865 7.173390 GGTCACTAGCTGAGTTGAAGTATTTTT 59.827 37.037 0.00 0.00 35.64 1.94
4051 6866 6.651225 GGTCACTAGCTGAGTTGAAGTATTTT 59.349 38.462 0.00 0.00 35.64 1.82
4052 6867 6.166982 GGTCACTAGCTGAGTTGAAGTATTT 58.833 40.000 0.00 0.00 35.64 1.40
4053 6868 5.337652 GGGTCACTAGCTGAGTTGAAGTATT 60.338 44.000 0.00 0.00 35.64 1.89
4054 6869 4.160626 GGGTCACTAGCTGAGTTGAAGTAT 59.839 45.833 0.00 0.00 35.64 2.12
4055 6870 3.510360 GGGTCACTAGCTGAGTTGAAGTA 59.490 47.826 0.00 0.00 35.64 2.24
4056 6871 2.300437 GGGTCACTAGCTGAGTTGAAGT 59.700 50.000 0.00 0.00 35.64 3.01
4057 6872 2.672478 CGGGTCACTAGCTGAGTTGAAG 60.672 54.545 0.00 0.00 35.64 3.02
4058 6873 1.272490 CGGGTCACTAGCTGAGTTGAA 59.728 52.381 0.00 0.00 35.64 2.69
4059 6874 0.888619 CGGGTCACTAGCTGAGTTGA 59.111 55.000 0.00 0.00 35.64 3.18
4060 6875 0.888619 TCGGGTCACTAGCTGAGTTG 59.111 55.000 0.00 0.00 35.64 3.16
4061 6876 1.629043 TTCGGGTCACTAGCTGAGTT 58.371 50.000 0.00 0.00 39.57 3.01
4062 6877 1.478510 CATTCGGGTCACTAGCTGAGT 59.521 52.381 0.00 0.00 39.57 3.41
4063 6878 1.202463 CCATTCGGGTCACTAGCTGAG 60.202 57.143 0.00 0.00 39.57 3.35
4064 6879 0.824109 CCATTCGGGTCACTAGCTGA 59.176 55.000 0.00 0.00 36.72 4.26
4065 6880 3.369381 CCATTCGGGTCACTAGCTG 57.631 57.895 0.00 0.00 0.00 4.24
4076 6891 2.738321 GCATTGGCTTTTACCCATTCGG 60.738 50.000 0.00 0.00 36.96 4.30
4077 6892 2.094286 TGCATTGGCTTTTACCCATTCG 60.094 45.455 0.00 0.00 41.91 3.34
4078 6893 3.608316 TGCATTGGCTTTTACCCATTC 57.392 42.857 0.00 0.00 41.91 2.67
4079 6894 4.573021 ATTGCATTGGCTTTTACCCATT 57.427 36.364 0.00 0.00 41.91 3.16
4080 6895 4.573021 AATTGCATTGGCTTTTACCCAT 57.427 36.364 0.00 0.00 41.91 4.00
4081 6896 4.070716 CAAATTGCATTGGCTTTTACCCA 58.929 39.130 0.00 0.00 41.91 4.51
4082 6897 3.119884 GCAAATTGCATTGGCTTTTACCC 60.120 43.478 13.73 0.00 44.26 3.69
4083 6898 4.082274 GCAAATTGCATTGGCTTTTACC 57.918 40.909 13.73 0.00 44.26 2.85
4096 6911 6.554419 TGACAACATAGTAGATGCAAATTGC 58.446 36.000 11.58 11.58 45.29 3.56
4097 6912 7.977904 TCTGACAACATAGTAGATGCAAATTG 58.022 34.615 0.00 0.00 0.00 2.32
4098 6913 7.826252 ACTCTGACAACATAGTAGATGCAAATT 59.174 33.333 0.00 0.00 32.90 1.82
4099 6914 7.334090 ACTCTGACAACATAGTAGATGCAAAT 58.666 34.615 0.00 0.00 32.90 2.32
4100 6915 6.701340 ACTCTGACAACATAGTAGATGCAAA 58.299 36.000 0.00 0.00 32.90 3.68
4101 6916 6.286240 ACTCTGACAACATAGTAGATGCAA 57.714 37.500 0.00 0.00 32.90 4.08
4102 6917 5.921962 ACTCTGACAACATAGTAGATGCA 57.078 39.130 0.00 0.00 32.90 3.96
4103 6918 5.521735 CCAACTCTGACAACATAGTAGATGC 59.478 44.000 0.00 0.00 33.40 3.91
4104 6919 6.045318 CCCAACTCTGACAACATAGTAGATG 58.955 44.000 0.00 0.00 33.40 2.90
4105 6920 5.395768 GCCCAACTCTGACAACATAGTAGAT 60.396 44.000 0.00 0.00 33.40 1.98
4106 6921 4.081642 GCCCAACTCTGACAACATAGTAGA 60.082 45.833 0.00 0.00 33.40 2.59
4107 6922 4.081420 AGCCCAACTCTGACAACATAGTAG 60.081 45.833 0.00 0.00 33.40 2.57
4108 6923 3.838317 AGCCCAACTCTGACAACATAGTA 59.162 43.478 0.00 0.00 33.40 1.82
4109 6924 2.639839 AGCCCAACTCTGACAACATAGT 59.360 45.455 0.00 0.00 35.48 2.12
4110 6925 3.265791 GAGCCCAACTCTGACAACATAG 58.734 50.000 0.00 0.00 42.62 2.23
4111 6926 2.637382 TGAGCCCAACTCTGACAACATA 59.363 45.455 0.00 0.00 46.41 2.29
4112 6927 1.421268 TGAGCCCAACTCTGACAACAT 59.579 47.619 0.00 0.00 46.41 2.71
4113 6928 0.836606 TGAGCCCAACTCTGACAACA 59.163 50.000 0.00 0.00 46.41 3.33
4114 6929 1.967319 TTGAGCCCAACTCTGACAAC 58.033 50.000 0.00 0.00 46.41 3.32
4115 6930 2.886523 CAATTGAGCCCAACTCTGACAA 59.113 45.455 0.00 0.00 46.41 3.18
4116 6931 2.106338 TCAATTGAGCCCAACTCTGACA 59.894 45.455 3.38 0.00 46.41 3.58
4117 6932 2.783135 TCAATTGAGCCCAACTCTGAC 58.217 47.619 3.38 0.00 46.41 3.51
4118 6933 3.415212 CTTCAATTGAGCCCAACTCTGA 58.585 45.455 8.41 0.00 46.41 3.27
4119 6934 2.094854 GCTTCAATTGAGCCCAACTCTG 60.095 50.000 8.41 0.00 46.41 3.35
4120 6935 2.165998 GCTTCAATTGAGCCCAACTCT 58.834 47.619 8.41 0.00 46.41 3.24
4121 6936 2.165998 AGCTTCAATTGAGCCCAACTC 58.834 47.619 19.67 0.00 46.45 3.01
4122 6937 2.299326 AGCTTCAATTGAGCCCAACT 57.701 45.000 19.67 7.03 34.72 3.16
4123 6938 4.519540 TTTAGCTTCAATTGAGCCCAAC 57.480 40.909 19.67 5.29 34.72 3.77
4124 6939 4.588528 ACTTTTAGCTTCAATTGAGCCCAA 59.411 37.500 19.67 13.95 36.61 4.12
4125 6940 4.151883 ACTTTTAGCTTCAATTGAGCCCA 58.848 39.130 19.67 10.18 0.00 5.36
4126 6941 4.380973 GGACTTTTAGCTTCAATTGAGCCC 60.381 45.833 19.67 11.82 0.00 5.19
4127 6942 4.460731 AGGACTTTTAGCTTCAATTGAGCC 59.539 41.667 19.67 11.17 0.00 4.70
4128 6943 5.635417 AGGACTTTTAGCTTCAATTGAGC 57.365 39.130 17.13 17.13 0.00 4.26
4129 6944 7.206981 TGAAGGACTTTTAGCTTCAATTGAG 57.793 36.000 8.41 4.57 32.07 3.02
4130 6945 7.765695 ATGAAGGACTTTTAGCTTCAATTGA 57.234 32.000 3.38 3.38 37.54 2.57
4131 6946 9.346725 GTAATGAAGGACTTTTAGCTTCAATTG 57.653 33.333 0.00 0.00 37.54 2.32
4132 6947 9.077885 TGTAATGAAGGACTTTTAGCTTCAATT 57.922 29.630 0.00 0.00 37.54 2.32
4133 6948 8.635765 TGTAATGAAGGACTTTTAGCTTCAAT 57.364 30.769 0.00 0.00 37.54 2.57
4134 6949 8.635765 ATGTAATGAAGGACTTTTAGCTTCAA 57.364 30.769 0.00 0.00 37.54 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.