Multiple sequence alignment - TraesCS3A01G082700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G082700 chr3A 100.000 4565 0 0 1 4565 53335726 53331162 0.000000e+00 8431.0
1 TraesCS3A01G082700 chr3D 91.108 2373 116 49 210 2559 42368059 42370359 0.000000e+00 3125.0
2 TraesCS3A01G082700 chr3D 90.977 1197 60 20 2610 3771 42370345 42371528 0.000000e+00 1568.0
3 TraesCS3A01G082700 chr3D 91.220 410 16 5 1 398 42366937 42367338 1.440000e-149 540.0
4 TraesCS3A01G082700 chr3D 92.012 338 26 1 3953 4289 42371977 42372314 1.490000e-129 473.0
5 TraesCS3A01G082700 chr3D 93.388 121 8 0 1 121 42367891 42368011 3.630000e-41 180.0
6 TraesCS3A01G082700 chr3D 85.714 168 24 0 2064 2231 42371611 42371778 1.310000e-40 178.0
7 TraesCS3A01G082700 chr3D 94.521 73 4 0 3770 3842 42371865 42371937 3.730000e-21 113.0
8 TraesCS3A01G082700 chr3D 89.655 58 6 0 3864 3921 42371934 42371991 1.760000e-09 75.0
9 TraesCS3A01G082700 chr3B 85.957 2414 189 65 208 2559 65361761 65359436 0.000000e+00 2442.0
10 TraesCS3A01G082700 chr3B 93.132 961 53 7 2695 3648 65359392 65358438 0.000000e+00 1397.0
11 TraesCS3A01G082700 chr3B 95.332 407 18 1 2764 3170 402457916 402458321 0.000000e+00 645.0
12 TraesCS3A01G082700 chr3B 95.086 407 19 1 2764 3170 793280411 793280006 1.380000e-179 640.0
13 TraesCS3A01G082700 chr3B 82.516 469 34 17 2112 2559 402457379 402457820 7.220000e-98 368.0
14 TraesCS3A01G082700 chr3B 82.090 469 35 25 2112 2559 793280947 793280507 5.620000e-94 355.0
15 TraesCS3A01G082700 chr3B 88.850 287 24 1 4003 4289 65358430 65358152 3.380000e-91 346.0
16 TraesCS3A01G082700 chr3B 80.938 320 49 7 2693 3009 65358305 65357995 4.560000e-60 243.0
17 TraesCS3A01G082700 chr3B 88.554 166 10 3 1 165 65361920 65361763 4.660000e-45 193.0
18 TraesCS3A01G082700 chr3B 94.495 109 4 1 2609 2715 402457805 402457913 2.820000e-37 167.0
19 TraesCS3A01G082700 chr3B 94.495 109 4 1 2609 2715 793280522 793280414 2.820000e-37 167.0
20 TraesCS3A01G082700 chr3B 98.438 64 1 0 2609 2672 65359451 65359388 3.730000e-21 113.0
21 TraesCS3A01G082700 chr3B 89.333 75 2 1 3212 3286 65357849 65357781 6.290000e-14 89.8
22 TraesCS3A01G082700 chrUn 95.086 407 19 1 2764 3170 336795503 336795908 1.380000e-179 640.0
23 TraesCS3A01G082700 chrUn 82.090 469 35 18 2112 2559 336794967 336795407 5.620000e-94 355.0
24 TraesCS3A01G082700 chrUn 83.137 255 27 13 212 462 65829592 65829350 7.690000e-53 219.0
25 TraesCS3A01G082700 chrUn 94.495 109 4 1 2609 2715 336795392 336795500 2.820000e-37 167.0
26 TraesCS3A01G082700 chr2D 95.086 407 18 2 2764 3170 547215873 547216277 1.380000e-179 640.0
27 TraesCS3A01G082700 chr2D 88.486 469 31 14 2112 2559 547215312 547215778 3.110000e-151 545.0
28 TraesCS3A01G082700 chr2D 93.578 109 4 2 2609 2715 547215763 547215870 4.730000e-35 159.0
29 TraesCS3A01G082700 chr4A 94.349 407 22 1 2764 3170 615513322 615513727 1.390000e-174 623.0
30 TraesCS3A01G082700 chr4A 82.090 469 36 17 2112 2559 615512785 615513226 1.560000e-94 357.0
31 TraesCS3A01G082700 chr4A 93.578 109 5 1 2609 2715 615513211 615513319 1.310000e-35 161.0
32 TraesCS3A01G082700 chr5B 88.273 469 32 14 2112 2559 455274924 455275390 1.440000e-149 540.0
33 TraesCS3A01G082700 chr5B 94.839 310 16 0 2764 3073 455275466 455275775 6.870000e-133 484.0
34 TraesCS3A01G082700 chr5B 84.615 260 24 11 210 464 36613442 36613194 1.270000e-60 244.0
35 TraesCS3A01G082700 chr5B 83.071 254 29 9 212 462 36798598 36798840 7.690000e-53 219.0
36 TraesCS3A01G082700 chr5B 100.000 58 0 0 2609 2666 455275375 455275432 1.740000e-19 108.0
37 TraesCS3A01G082700 chr1D 85.159 283 23 11 212 490 301946757 301946490 5.820000e-69 272.0
38 TraesCS3A01G082700 chr1B 84.644 267 23 14 212 464 407543567 407543305 2.730000e-62 250.0
39 TraesCS3A01G082700 chr1A 83.333 294 25 17 212 490 376669877 376669593 2.730000e-62 250.0
40 TraesCS3A01G082700 chr5D 84.109 258 25 12 211 463 42066132 42066378 7.640000e-58 235.0
41 TraesCS3A01G082700 chr5A 83.012 259 28 12 211 464 30391149 30390902 2.140000e-53 220.0
42 TraesCS3A01G082700 chr6D 87.919 149 9 7 1 147 112959770 112959911 2.820000e-37 167.0
43 TraesCS3A01G082700 chr6D 86.607 112 13 1 2982 3093 420191294 420191185 6.200000e-24 122.0
44 TraesCS3A01G082700 chr6B 86.667 150 13 6 1 150 202512846 202512988 4.730000e-35 159.0
45 TraesCS3A01G082700 chr6A 86.184 152 12 8 1 150 140733933 140734077 6.110000e-34 156.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G082700 chr3A 53331162 53335726 4564 True 8431.000000 8431 100.000000 1 4565 1 chr3A.!!$R1 4564
1 TraesCS3A01G082700 chr3D 42366937 42372314 5377 False 781.500000 3125 91.074375 1 4289 8 chr3D.!!$F1 4288
2 TraesCS3A01G082700 chr3B 65357781 65361920 4139 True 689.114286 2442 89.314571 1 4289 7 chr3B.!!$R1 4288
3 TraesCS3A01G082700 chr3B 402457379 402458321 942 False 393.333333 645 90.781000 2112 3170 3 chr3B.!!$F1 1058
4 TraesCS3A01G082700 chr3B 793280006 793280947 941 True 387.333333 640 90.557000 2112 3170 3 chr3B.!!$R2 1058
5 TraesCS3A01G082700 chrUn 336794967 336795908 941 False 387.333333 640 90.557000 2112 3170 3 chrUn.!!$F1 1058
6 TraesCS3A01G082700 chr2D 547215312 547216277 965 False 448.000000 640 92.383333 2112 3170 3 chr2D.!!$F1 1058
7 TraesCS3A01G082700 chr4A 615512785 615513727 942 False 380.333333 623 90.005667 2112 3170 3 chr4A.!!$F1 1058
8 TraesCS3A01G082700 chr5B 455274924 455275775 851 False 377.333333 540 94.370667 2112 3073 3 chr5B.!!$F2 961

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
705 1633 0.039256 GCAAGCCGCACAAGAAATCA 60.039 50.0 0.00 0.00 41.79 2.57 F
1242 2199 0.745845 CAGATTCCCTTCCCGCAGTG 60.746 60.0 0.00 0.00 0.00 3.66 F
1555 2522 0.166597 ACTGTTCGATGCATTGCACG 59.833 50.0 14.66 18.25 43.04 5.34 F
2581 3603 0.882474 TTTTTGGACCGGGCATAACG 59.118 50.0 11.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1556 2523 0.613260 TCCAATCTGAACTGGGACCG 59.387 55.0 8.74 0.0 33.19 4.79 R
2562 3584 0.882474 CGTTATGCCCGGTCCAAAAA 59.118 50.0 0.00 0.0 0.00 1.94 R
2691 3727 0.927537 TGCACACGTCAGAAAGAACG 59.072 50.0 0.00 0.0 0.00 3.95 R
3960 5378 0.522626 CGCACAATGAATCTGCACCA 59.477 50.0 0.00 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.376518 TCCAAACAATCTTCTCCTGGCT 59.623 45.455 0.00 0.00 0.00 4.75
32 33 3.009916 ACAATCTTCTCCTGGCTTGTCAT 59.990 43.478 0.00 0.00 0.00 3.06
108 109 8.854614 ACTCATAATATAGAGCCCAACAAATC 57.145 34.615 0.00 0.00 35.28 2.17
115 116 2.027385 GAGCCCAACAAATCCATCCTC 58.973 52.381 0.00 0.00 0.00 3.71
161 162 3.781079 AAGAGAGAACAGAGCAGATCG 57.219 47.619 0.00 0.00 0.00 3.69
186 187 3.372206 AGCGATCCGAAATTCAAGAACAG 59.628 43.478 0.00 0.00 0.00 3.16
191 192 3.748048 TCCGAAATTCAAGAACAGAGCAG 59.252 43.478 0.00 0.00 0.00 4.24
196 197 0.319900 TCAAGAACAGAGCAGACGGC 60.320 55.000 0.00 0.00 45.30 5.68
335 339 6.528537 AATCAATCCACCATCAAATCGAAA 57.471 33.333 0.00 0.00 0.00 3.46
342 346 5.353956 TCCACCATCAAATCGAAATACACAG 59.646 40.000 0.00 0.00 0.00 3.66
359 363 1.064952 ACAGCCGGAAACAACGAAAAG 59.935 47.619 5.05 0.00 0.00 2.27
364 368 2.478879 CCGGAAACAACGAAAAGCAAGT 60.479 45.455 0.00 0.00 0.00 3.16
365 369 3.242804 CCGGAAACAACGAAAAGCAAGTA 60.243 43.478 0.00 0.00 0.00 2.24
451 1376 3.423154 CTCCGGCACAGGTTTCGC 61.423 66.667 0.00 0.00 0.00 4.70
477 1402 2.433664 GCCGACCGACGACCAATT 60.434 61.111 0.00 0.00 45.77 2.32
487 1412 2.601266 CGACGACCAATTGACAACAACC 60.601 50.000 7.12 0.00 38.90 3.77
494 1419 4.895297 ACCAATTGACAACAACCAATCTCT 59.105 37.500 7.12 0.00 38.90 3.10
495 1420 5.363580 ACCAATTGACAACAACCAATCTCTT 59.636 36.000 7.12 0.00 38.90 2.85
497 1422 6.863126 CCAATTGACAACAACCAATCTCTTAC 59.137 38.462 7.12 0.00 38.90 2.34
498 1423 6.575162 ATTGACAACAACCAATCTCTTACC 57.425 37.500 0.00 0.00 38.90 2.85
500 1425 5.441500 TGACAACAACCAATCTCTTACCAA 58.558 37.500 0.00 0.00 0.00 3.67
501 1426 5.530915 TGACAACAACCAATCTCTTACCAAG 59.469 40.000 0.00 0.00 0.00 3.61
502 1427 5.690865 ACAACAACCAATCTCTTACCAAGA 58.309 37.500 0.00 0.00 35.87 3.02
504 1429 6.039382 ACAACAACCAATCTCTTACCAAGAAC 59.961 38.462 0.00 0.00 37.02 3.01
528 1453 6.323739 ACAAAAATAGAAAGGAACCAGAGCAA 59.676 34.615 0.00 0.00 0.00 3.91
543 1468 2.503356 AGAGCAATTGATTCGAGGAGGT 59.497 45.455 10.34 0.00 0.00 3.85
579 1504 3.588955 TCTCGTGTGGAATTGAGATGTG 58.411 45.455 0.00 0.00 32.80 3.21
649 1577 1.540435 CCCCCAACCCACCAAATTCG 61.540 60.000 0.00 0.00 0.00 3.34
705 1633 0.039256 GCAAGCCGCACAAGAAATCA 60.039 50.000 0.00 0.00 41.79 2.57
706 1634 1.973138 CAAGCCGCACAAGAAATCAG 58.027 50.000 0.00 0.00 0.00 2.90
714 1658 3.735746 CGCACAAGAAATCAGGGAAAAAC 59.264 43.478 0.00 0.00 0.00 2.43
716 1660 5.115480 GCACAAGAAATCAGGGAAAAACAA 58.885 37.500 0.00 0.00 0.00 2.83
724 1668 7.704899 AGAAATCAGGGAAAAACAAAAGTAACG 59.295 33.333 0.00 0.00 0.00 3.18
727 1671 3.702548 AGGGAAAAACAAAAGTAACGCCT 59.297 39.130 0.00 0.00 0.00 5.52
730 1674 4.678287 GGAAAAACAAAAGTAACGCCTAGC 59.322 41.667 0.00 0.00 0.00 3.42
766 1710 4.691860 TCAGCTAAGCAAAAGATTCAGC 57.308 40.909 0.00 0.00 0.00 4.26
772 1716 5.066246 GCTAAGCAAAAGATTCAGCTGAGAT 59.934 40.000 17.43 13.12 37.72 2.75
777 1721 5.330295 CAAAAGATTCAGCTGAGATTTCGG 58.670 41.667 17.43 10.72 0.00 4.30
820 1764 0.976590 AGGACGAAGGAACCCTAGCC 60.977 60.000 0.00 0.00 31.13 3.93
871 1815 5.221342 CGCTCTGGTTTTATAGATGGTCTCT 60.221 44.000 0.00 0.00 38.06 3.10
877 1821 3.650070 TTATAGATGGTCTCTGCTGCG 57.350 47.619 0.00 0.00 35.28 5.18
923 1868 2.101575 GTACCAGTCGATCGCGCA 59.898 61.111 11.09 0.00 37.46 6.09
987 1932 3.062466 GCCCTGCCTTTCGTTCCC 61.062 66.667 0.00 0.00 0.00 3.97
988 1933 2.757077 CCCTGCCTTTCGTTCCCT 59.243 61.111 0.00 0.00 0.00 4.20
1018 1963 1.283181 CGCGGATAACTCGAGGGAG 59.717 63.158 18.41 2.98 46.13 4.30
1095 2040 2.202810 CTTCTTCTCGCCCTCCGC 60.203 66.667 0.00 0.00 36.73 5.54
1139 2096 4.717629 CGCACGCCGTCTTCTCCA 62.718 66.667 0.00 0.00 0.00 3.86
1141 2098 2.338620 CACGCCGTCTTCTCCACA 59.661 61.111 0.00 0.00 0.00 4.17
1170 2127 2.802724 CCACCCGCCGTATCCATCA 61.803 63.158 0.00 0.00 0.00 3.07
1242 2199 0.745845 CAGATTCCCTTCCCGCAGTG 60.746 60.000 0.00 0.00 0.00 3.66
1245 2202 2.484287 ATTCCCTTCCCGCAGTGGTG 62.484 60.000 0.00 0.00 35.15 4.17
1369 2329 2.184322 CACCCATCCGTCTCACCG 59.816 66.667 0.00 0.00 0.00 4.94
1373 2333 0.750850 CCCATCCGTCTCACCGTTAT 59.249 55.000 0.00 0.00 0.00 1.89
1380 2340 3.128242 TCCGTCTCACCGTTATTCTTCTC 59.872 47.826 0.00 0.00 0.00 2.87
1416 2383 1.808531 CTTGTGGTGGGTGTGCATGG 61.809 60.000 0.00 0.00 0.00 3.66
1434 2401 5.063180 CATGGCTGCAATCTCAGTTTTAA 57.937 39.130 0.50 0.00 36.49 1.52
1435 2402 5.472148 CATGGCTGCAATCTCAGTTTTAAA 58.528 37.500 0.50 0.00 36.49 1.52
1440 2407 6.089954 GGCTGCAATCTCAGTTTTAAACAATC 59.910 38.462 10.60 0.00 36.49 2.67
1441 2408 6.865205 GCTGCAATCTCAGTTTTAAACAATCT 59.135 34.615 10.60 0.00 36.49 2.40
1445 2412 9.415544 GCAATCTCAGTTTTAAACAATCTCAAT 57.584 29.630 10.60 0.00 0.00 2.57
1513 2480 1.338973 GCCCATCTACATCGTCGGTAA 59.661 52.381 0.00 0.00 0.00 2.85
1514 2481 2.029290 GCCCATCTACATCGTCGGTAAT 60.029 50.000 0.00 0.00 0.00 1.89
1515 2482 3.192001 GCCCATCTACATCGTCGGTAATA 59.808 47.826 0.00 0.00 0.00 0.98
1516 2483 4.321452 GCCCATCTACATCGTCGGTAATAA 60.321 45.833 0.00 0.00 0.00 1.40
1543 2510 4.271049 TCTTCTTTCTCTGCAAACTGTTCG 59.729 41.667 0.00 0.00 0.00 3.95
1554 2521 2.336554 AACTGTTCGATGCATTGCAC 57.663 45.000 14.66 9.41 43.04 4.57
1555 2522 0.166597 ACTGTTCGATGCATTGCACG 59.833 50.000 14.66 18.25 43.04 5.34
1556 2523 1.129879 CTGTTCGATGCATTGCACGC 61.130 55.000 14.66 8.32 43.04 5.34
1557 2524 2.098108 TTCGATGCATTGCACGCG 59.902 55.556 22.48 22.48 43.04 6.01
1733 2705 4.821589 GTCCTCGGCGGCAAGGAG 62.822 72.222 20.54 12.08 42.29 3.69
1797 2769 2.791347 AGTCGAGGTGCTCTCTCTAA 57.209 50.000 0.00 0.00 40.30 2.10
1811 2783 5.934625 GCTCTCTCTAAACAAACCATCTTGA 59.065 40.000 0.00 0.00 0.00 3.02
1838 2810 4.152402 AGTTCATTCGTTCGTTCAATCCTG 59.848 41.667 0.00 0.00 0.00 3.86
1849 2821 2.424956 GTTCAATCCTGGCACCATTCTC 59.575 50.000 0.00 0.00 0.00 2.87
1991 2964 5.124457 ACTTGTATGCACTTAAATGCCTCTG 59.876 40.000 6.42 0.00 45.50 3.35
2172 3145 2.034066 TTGAAGAGCAAGGGGGCG 59.966 61.111 0.00 0.00 39.27 6.13
2318 3320 8.458573 TGTTTACACTTGGATAACTGTGATTT 57.541 30.769 0.00 0.00 34.81 2.17
2437 3443 4.445452 AATTTGGTCTGTAATGCAGCAG 57.555 40.909 0.00 8.80 44.66 4.24
2445 3451 4.396166 GTCTGTAATGCAGCAGGTGTAAAT 59.604 41.667 0.00 0.00 44.66 1.40
2458 3464 5.126061 GCAGGTGTAAATTCAGAATGTGGAT 59.874 40.000 0.00 0.00 37.40 3.41
2462 3468 9.308000 AGGTGTAAATTCAGAATGTGGATTTTA 57.692 29.630 1.82 0.00 37.40 1.52
2464 3471 9.906660 GTGTAAATTCAGAATGTGGATTTTACA 57.093 29.630 1.82 13.46 42.00 2.41
2476 3483 6.530120 TGTGGATTTTACAGTCTAGCTTCAA 58.470 36.000 0.00 0.00 0.00 2.69
2483 3504 4.342862 ACAGTCTAGCTTCAATGTGTGT 57.657 40.909 0.00 0.00 0.00 3.72
2543 3565 8.093927 TGTGTTCATGTGATCTTCTTGTATACA 58.906 33.333 0.08 0.08 0.00 2.29
2544 3566 8.383619 GTGTTCATGTGATCTTCTTGTATACAC 58.616 37.037 4.68 0.00 0.00 2.90
2545 3567 7.549134 TGTTCATGTGATCTTCTTGTATACACC 59.451 37.037 4.68 0.00 0.00 4.16
2546 3568 6.582636 TCATGTGATCTTCTTGTATACACCC 58.417 40.000 4.68 0.00 0.00 4.61
2547 3569 6.384015 TCATGTGATCTTCTTGTATACACCCT 59.616 38.462 4.68 0.00 0.00 4.34
2548 3570 6.620877 TGTGATCTTCTTGTATACACCCTT 57.379 37.500 4.68 0.00 0.00 3.95
2549 3571 6.640518 TGTGATCTTCTTGTATACACCCTTC 58.359 40.000 4.68 0.00 0.00 3.46
2550 3572 6.212589 TGTGATCTTCTTGTATACACCCTTCA 59.787 38.462 4.68 2.15 0.00 3.02
2551 3573 6.535508 GTGATCTTCTTGTATACACCCTTCAC 59.464 42.308 4.68 10.24 0.00 3.18
2552 3574 6.212589 TGATCTTCTTGTATACACCCTTCACA 59.787 38.462 4.68 0.00 0.00 3.58
2553 3575 6.620877 TCTTCTTGTATACACCCTTCACAT 57.379 37.500 4.68 0.00 0.00 3.21
2554 3576 7.727578 TCTTCTTGTATACACCCTTCACATA 57.272 36.000 4.68 0.00 0.00 2.29
2555 3577 8.141298 TCTTCTTGTATACACCCTTCACATAA 57.859 34.615 4.68 0.00 0.00 1.90
2556 3578 8.258007 TCTTCTTGTATACACCCTTCACATAAG 58.742 37.037 4.68 0.00 0.00 1.73
2557 3579 7.727578 TCTTGTATACACCCTTCACATAAGA 57.272 36.000 4.68 0.00 0.00 2.10
2558 3580 8.319057 TCTTGTATACACCCTTCACATAAGAT 57.681 34.615 4.68 0.00 0.00 2.40
2559 3581 8.768397 TCTTGTATACACCCTTCACATAAGATT 58.232 33.333 4.68 0.00 0.00 2.40
2560 3582 9.396022 CTTGTATACACCCTTCACATAAGATTT 57.604 33.333 4.68 0.00 0.00 2.17
2561 3583 9.747898 TTGTATACACCCTTCACATAAGATTTT 57.252 29.630 4.68 0.00 0.00 1.82
2562 3584 9.747898 TGTATACACCCTTCACATAAGATTTTT 57.252 29.630 0.08 0.00 0.00 1.94
2581 3603 0.882474 TTTTTGGACCGGGCATAACG 59.118 50.000 11.00 0.00 0.00 3.18
2582 3604 1.587933 TTTTGGACCGGGCATAACGC 61.588 55.000 11.00 0.00 41.28 4.84
2595 3617 4.632538 GCATAACGCCTTTCCATTACTT 57.367 40.909 0.00 0.00 32.94 2.24
2596 3618 5.744666 GCATAACGCCTTTCCATTACTTA 57.255 39.130 0.00 0.00 32.94 2.24
2597 3619 6.313744 GCATAACGCCTTTCCATTACTTAT 57.686 37.500 0.00 0.00 32.94 1.73
2598 3620 6.371389 GCATAACGCCTTTCCATTACTTATC 58.629 40.000 0.00 0.00 32.94 1.75
2599 3621 6.017440 GCATAACGCCTTTCCATTACTTATCA 60.017 38.462 0.00 0.00 32.94 2.15
2600 3622 7.308589 GCATAACGCCTTTCCATTACTTATCAT 60.309 37.037 0.00 0.00 32.94 2.45
2601 3623 9.214957 CATAACGCCTTTCCATTACTTATCATA 57.785 33.333 0.00 0.00 0.00 2.15
2602 3624 9.787435 ATAACGCCTTTCCATTACTTATCATAA 57.213 29.630 0.00 0.00 0.00 1.90
2603 3625 8.691661 AACGCCTTTCCATTACTTATCATAAT 57.308 30.769 0.00 0.00 0.00 1.28
2604 3626 8.099364 ACGCCTTTCCATTACTTATCATAATG 57.901 34.615 0.00 0.00 38.99 1.90
2691 3727 3.418684 TTTGCTAAGACCCTGGACTTC 57.581 47.619 4.19 0.00 32.91 3.01
2725 3761 2.630098 GTGTGCATCTCTATCCTAGCCA 59.370 50.000 0.00 0.00 0.00 4.75
2777 3813 6.919775 AGGTGATAGGCTTACGATCTATTT 57.080 37.500 0.00 0.00 32.98 1.40
2823 3859 2.182537 GCAATGGCAAAGCTCCGG 59.817 61.111 0.00 0.00 40.72 5.14
2978 4014 9.190317 GGAAACCCTATTGACATTCTCTTAAAT 57.810 33.333 0.00 0.00 0.00 1.40
3184 4227 5.634020 GGTGAATATAGCTAATGGTGACGTC 59.366 44.000 9.11 9.11 0.00 4.34
3203 4246 3.669557 CGTCGGACACATTCCAATTTTCC 60.670 47.826 9.10 0.00 46.29 3.13
3345 4388 7.463119 CGCTTGATTTCAATATTTTTGCGACAT 60.463 33.333 12.60 0.00 40.52 3.06
3365 4408 6.346518 CGACATTTTCATATACATAGTGCGCA 60.347 38.462 5.66 5.66 0.00 6.09
3388 4431 0.252835 ATGAAGGCTTTGGGGGCATT 60.253 50.000 0.00 0.00 36.40 3.56
3389 4432 0.473501 TGAAGGCTTTGGGGGCATTT 60.474 50.000 0.00 0.00 33.82 2.32
3390 4433 0.250234 GAAGGCTTTGGGGGCATTTC 59.750 55.000 0.00 0.00 33.82 2.17
3391 4434 1.543944 AAGGCTTTGGGGGCATTTCG 61.544 55.000 0.00 0.00 29.18 3.46
3392 4435 2.282783 GGCTTTGGGGGCATTTCGT 61.283 57.895 0.00 0.00 0.00 3.85
3393 4436 1.079888 GCTTTGGGGGCATTTCGTG 60.080 57.895 0.00 0.00 0.00 4.35
3394 4437 1.815817 GCTTTGGGGGCATTTCGTGT 61.816 55.000 0.00 0.00 0.00 4.49
3395 4438 1.540267 CTTTGGGGGCATTTCGTGTA 58.460 50.000 0.00 0.00 0.00 2.90
3396 4439 1.889829 CTTTGGGGGCATTTCGTGTAA 59.110 47.619 0.00 0.00 0.00 2.41
3426 4480 8.301720 AGTCTTTCACGACATTATAGTAACACA 58.698 33.333 0.00 0.00 36.38 3.72
3539 4598 6.665680 TGAGTAAGAAAGTAGAAGAGGAGCAT 59.334 38.462 0.00 0.00 0.00 3.79
3572 4632 8.253113 ACTCTTGATGAAAGTCAAATTTGTGTT 58.747 29.630 17.47 9.51 37.63 3.32
3650 4730 2.302733 GGGGCATCAAAACCAGTGAATT 59.697 45.455 0.00 0.00 0.00 2.17
3654 4734 3.006752 GCATCAAAACCAGTGAATTCCCA 59.993 43.478 2.27 0.00 0.00 4.37
3705 4785 1.727467 GGCATCGTTCCATTTCCGG 59.273 57.895 0.00 0.00 0.00 5.14
3706 4786 1.064134 GCATCGTTCCATTTCCGGC 59.936 57.895 0.00 0.00 0.00 6.13
3759 4839 2.071778 TGCCTGCTTCTTCCTTGTTT 57.928 45.000 0.00 0.00 0.00 2.83
3761 4841 1.000171 GCCTGCTTCTTCCTTGTTTGG 60.000 52.381 0.00 0.00 0.00 3.28
3779 5197 1.226128 GCGAAACCGATTCAGCAGC 60.226 57.895 0.00 0.00 37.96 5.25
3783 5201 0.813184 AAACCGATTCAGCAGCCATG 59.187 50.000 0.00 0.00 0.00 3.66
3828 5246 1.247567 CCCTGTGCCCTAAACAACAG 58.752 55.000 0.00 0.00 0.00 3.16
3842 5260 7.557719 CCCTAAACAACAGTCTAATGAATCCAT 59.442 37.037 0.00 0.00 33.66 3.41
3843 5261 8.616076 CCTAAACAACAGTCTAATGAATCCATC 58.384 37.037 0.00 0.00 31.40 3.51
3844 5262 7.396540 AAACAACAGTCTAATGAATCCATCC 57.603 36.000 0.00 0.00 31.40 3.51
3845 5263 5.440610 ACAACAGTCTAATGAATCCATCCC 58.559 41.667 0.00 0.00 31.40 3.85
3848 5266 4.723789 ACAGTCTAATGAATCCATCCCTGT 59.276 41.667 0.00 0.00 31.40 4.00
3850 5268 6.386927 ACAGTCTAATGAATCCATCCCTGTTA 59.613 38.462 0.00 0.00 29.70 2.41
3851 5269 6.708054 CAGTCTAATGAATCCATCCCTGTTAC 59.292 42.308 0.00 0.00 31.40 2.50
3853 5271 3.884037 ATGAATCCATCCCTGTTACCC 57.116 47.619 0.00 0.00 0.00 3.69
3854 5272 2.858644 TGAATCCATCCCTGTTACCCT 58.141 47.619 0.00 0.00 0.00 4.34
3855 5273 2.509548 TGAATCCATCCCTGTTACCCTG 59.490 50.000 0.00 0.00 0.00 4.45
3856 5274 2.286935 ATCCATCCCTGTTACCCTGT 57.713 50.000 0.00 0.00 0.00 4.00
3857 5275 2.953093 TCCATCCCTGTTACCCTGTA 57.047 50.000 0.00 0.00 0.00 2.74
3858 5276 3.208570 TCCATCCCTGTTACCCTGTAA 57.791 47.619 0.00 0.00 0.00 2.41
3859 5277 3.112263 TCCATCCCTGTTACCCTGTAAG 58.888 50.000 0.00 0.00 0.00 2.34
3860 5278 3.112263 CCATCCCTGTTACCCTGTAAGA 58.888 50.000 0.00 0.00 34.07 2.10
3861 5279 3.134804 CCATCCCTGTTACCCTGTAAGAG 59.865 52.174 4.62 4.62 34.07 2.85
3862 5280 2.185387 TCCCTGTTACCCTGTAAGAGC 58.815 52.381 5.81 0.00 34.07 4.09
3863 5281 2.188817 CCCTGTTACCCTGTAAGAGCT 58.811 52.381 5.81 0.00 34.07 4.09
3864 5282 2.168728 CCCTGTTACCCTGTAAGAGCTC 59.831 54.545 5.27 5.27 34.07 4.09
3865 5283 2.168728 CCTGTTACCCTGTAAGAGCTCC 59.831 54.545 10.93 0.00 34.07 4.70
3866 5284 2.832129 CTGTTACCCTGTAAGAGCTCCA 59.168 50.000 10.93 0.00 34.07 3.86
3867 5285 3.244582 TGTTACCCTGTAAGAGCTCCAA 58.755 45.455 10.93 0.00 34.07 3.53
3868 5286 3.649023 TGTTACCCTGTAAGAGCTCCAAA 59.351 43.478 10.93 0.00 34.07 3.28
3869 5287 2.861147 ACCCTGTAAGAGCTCCAAAC 57.139 50.000 10.93 6.93 34.07 2.93
3870 5288 2.339769 ACCCTGTAAGAGCTCCAAACT 58.660 47.619 10.93 0.00 34.07 2.66
3871 5289 2.711547 ACCCTGTAAGAGCTCCAAACTT 59.288 45.455 10.93 0.00 34.07 2.66
3872 5290 3.077359 CCCTGTAAGAGCTCCAAACTTG 58.923 50.000 10.93 4.17 34.07 3.16
3873 5291 3.077359 CCTGTAAGAGCTCCAAACTTGG 58.923 50.000 10.93 1.77 43.58 3.61
3874 5292 3.496870 CCTGTAAGAGCTCCAAACTTGGT 60.497 47.826 10.93 0.00 42.97 3.67
3875 5293 3.499918 CTGTAAGAGCTCCAAACTTGGTG 59.500 47.826 10.93 7.22 42.97 4.17
3876 5294 4.984006 CTGTAAGAGCTCCAAACTTGGTGT 60.984 45.833 10.93 0.00 42.97 4.16
3877 5295 5.741964 CTGTAAGAGCTCCAAACTTGGTGTA 60.742 44.000 10.93 0.00 42.97 2.90
3906 5324 5.396484 CAGCAAGTGTAAATTCAGGATGTG 58.604 41.667 0.00 0.00 37.40 3.21
3913 5331 2.698855 AATTCAGGATGTGGACTCCG 57.301 50.000 0.00 0.00 37.88 4.63
3916 5334 1.448540 CAGGATGTGGACTCCGTGC 60.449 63.158 0.00 0.00 37.88 5.34
3917 5335 1.610673 AGGATGTGGACTCCGTGCT 60.611 57.895 0.00 0.00 37.88 4.40
3918 5336 1.448540 GGATGTGGACTCCGTGCTG 60.449 63.158 0.00 0.00 0.00 4.41
3919 5337 2.046892 ATGTGGACTCCGTGCTGC 60.047 61.111 0.00 0.00 0.00 5.25
3920 5338 2.786539 GATGTGGACTCCGTGCTGCA 62.787 60.000 0.00 0.00 0.00 4.41
3921 5339 2.046892 GTGGACTCCGTGCTGCAT 60.047 61.111 5.27 0.00 0.00 3.96
3922 5340 2.103042 GTGGACTCCGTGCTGCATC 61.103 63.158 5.27 0.00 0.00 3.91
3923 5341 2.887568 GGACTCCGTGCTGCATCG 60.888 66.667 5.27 11.35 0.00 3.84
3924 5342 3.558411 GACTCCGTGCTGCATCGC 61.558 66.667 5.27 0.00 0.00 4.58
3931 5349 3.668312 TGCTGCATCGCCGCAAAA 61.668 55.556 0.00 0.00 44.88 2.44
3932 5350 2.430582 GCTGCATCGCCGCAAAAA 60.431 55.556 0.00 0.00 42.45 1.94
3968 5386 2.957402 AAAAGACTCCATGGTGCAGA 57.043 45.000 12.58 0.00 0.00 4.26
3973 5391 2.508716 AGACTCCATGGTGCAGATTCAT 59.491 45.455 12.58 0.00 0.00 2.57
3990 5408 1.197492 TCATTGTGCGTTCATCACAGC 59.803 47.619 0.00 0.00 44.18 4.40
4042 5461 3.144506 GCATCCCTGTATTCATGTGGAG 58.855 50.000 0.00 0.00 0.00 3.86
4072 5491 3.831333 TCTATCCACCATTTGCAAAAGCA 59.169 39.130 17.19 0.00 0.00 3.91
4086 5505 3.119814 GCAAAAGCAGGTTAAGAGCCTAC 60.120 47.826 0.00 0.00 34.45 3.18
4092 5511 3.430374 GCAGGTTAAGAGCCTACGATTCA 60.430 47.826 0.00 0.00 34.45 2.57
4128 5547 0.486879 TCCTGCCCTTTGGTTCCATT 59.513 50.000 0.00 0.00 0.00 3.16
4150 5569 4.789095 TTAGTTGTTCTTTCTGACGTGC 57.211 40.909 0.00 0.00 0.00 5.34
4158 5577 2.158957 TCTTTCTGACGTGCCCATATCC 60.159 50.000 0.00 0.00 0.00 2.59
4168 5587 2.040278 GTGCCCATATCCATCTTAGCCA 59.960 50.000 0.00 0.00 0.00 4.75
4183 5602 4.400251 TCTTAGCCAGAAATTGATGCCAAG 59.600 41.667 0.00 0.00 35.48 3.61
4289 5708 4.335315 GCCACCGTTATGATGATCTGAAAA 59.665 41.667 0.00 0.00 0.00 2.29
4313 5732 9.836076 AAAAAGTTCACTAAAGACAGTTAACAC 57.164 29.630 8.61 0.00 35.85 3.32
4314 5733 8.556213 AAAGTTCACTAAAGACAGTTAACACA 57.444 30.769 8.61 0.00 35.85 3.72
4315 5734 8.556213 AAGTTCACTAAAGACAGTTAACACAA 57.444 30.769 8.61 0.00 35.85 3.33
4316 5735 8.556213 AGTTCACTAAAGACAGTTAACACAAA 57.444 30.769 8.61 0.00 35.85 2.83
4317 5736 8.448615 AGTTCACTAAAGACAGTTAACACAAAC 58.551 33.333 8.61 0.00 35.85 2.93
4350 5769 7.979115 AATCGTGAATTTTTCGAAAAGTTCA 57.021 28.000 37.14 37.14 45.89 3.18
4458 5877 9.538508 AAGAGGTTCATGAAAATTTGAGAAAAG 57.461 29.630 10.35 0.00 0.00 2.27
4459 5878 8.699130 AGAGGTTCATGAAAATTTGAGAAAAGT 58.301 29.630 10.35 0.00 0.00 2.66
4460 5879 9.317936 GAGGTTCATGAAAATTTGAGAAAAGTT 57.682 29.630 10.35 0.00 0.00 2.66
4461 5880 9.317936 AGGTTCATGAAAATTTGAGAAAAGTTC 57.682 29.630 10.35 0.00 0.00 3.01
4463 5882 9.906111 GTTCATGAAAATTTGAGAAAAGTTCAC 57.094 29.630 10.35 0.00 33.10 3.18
4464 5883 9.874205 TTCATGAAAATTTGAGAAAAGTTCACT 57.126 25.926 5.45 0.00 33.10 3.41
4535 5954 6.773976 AGTTCATGAAGTTGGAAAAGTTCA 57.226 33.333 8.80 10.28 43.73 3.18
4536 5955 6.564328 AGTTCATGAAGTTGGAAAAGTTCAC 58.436 36.000 8.80 0.00 42.77 3.18
4537 5956 6.152661 AGTTCATGAAGTTGGAAAAGTTCACA 59.847 34.615 8.80 0.00 42.77 3.58
4538 5957 6.522625 TCATGAAGTTGGAAAAGTTCACAA 57.477 33.333 10.12 1.10 42.77 3.33
4539 5958 6.929625 TCATGAAGTTGGAAAAGTTCACAAA 58.070 32.000 10.12 0.00 42.77 2.83
4541 5960 8.040132 TCATGAAGTTGGAAAAGTTCACAAATT 58.960 29.630 10.12 3.56 42.77 1.82
4542 5961 8.667463 CATGAAGTTGGAAAAGTTCACAAATTT 58.333 29.630 10.12 0.00 42.77 1.82
4543 5962 8.027440 TGAAGTTGGAAAAGTTCACAAATTTG 57.973 30.769 16.67 16.67 37.24 2.32
4547 5966 8.093927 AGTTGGAAAAGTTCACAAATTTGAGAA 58.906 29.630 24.64 23.27 35.83 2.87
4549 5968 8.477984 TGGAAAAGTTCACAAATTTGAGAAAG 57.522 30.769 25.98 11.16 38.99 2.62
4550 5969 8.093927 TGGAAAAGTTCACAAATTTGAGAAAGT 58.906 29.630 25.98 16.61 38.99 2.66
4551 5970 8.935844 GGAAAAGTTCACAAATTTGAGAAAGTT 58.064 29.630 25.98 20.22 38.99 2.66
4553 5972 9.487790 AAAAGTTCACAAATTTGAGAAAGTTCA 57.512 25.926 25.98 6.91 38.99 3.18
4554 5973 8.466086 AAGTTCACAAATTTGAGAAAGTTCAC 57.534 30.769 25.98 16.39 38.99 3.18
4556 5975 5.034152 TCACAAATTTGAGAAAGTTCACGC 58.966 37.500 24.64 0.00 0.00 5.34
4557 5976 5.036737 CACAAATTTGAGAAAGTTCACGCT 58.963 37.500 24.64 0.00 0.00 5.07
4558 5977 5.516339 CACAAATTTGAGAAAGTTCACGCTT 59.484 36.000 24.64 0.00 0.00 4.68
4560 5979 6.589907 ACAAATTTGAGAAAGTTCACGCTTTT 59.410 30.769 24.64 0.00 38.64 2.27
4563 5982 4.955925 TGAGAAAGTTCACGCTTTTGAA 57.044 36.364 0.00 0.00 38.64 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.742856 CGCATGGAGCCTAGAATGACAA 60.743 50.000 0.00 0.00 41.38 3.18
32 33 2.315781 CTGCCGCATGGAGCCTAGAA 62.316 60.000 0.00 0.00 41.38 2.10
108 109 8.206867 TCTTTGTAGATTTGTAGATGAGGATGG 58.793 37.037 0.00 0.00 0.00 3.51
150 151 1.435105 TCGCTTCCGATCTGCTCTG 59.565 57.895 0.00 0.00 38.82 3.35
161 162 2.936498 TCTTGAATTTCGGATCGCTTCC 59.064 45.455 0.00 0.00 41.59 3.46
200 201 3.451556 ATCGCATCTGGACTGCCGG 62.452 63.158 0.00 0.00 42.30 6.13
201 202 1.953138 GATCGCATCTGGACTGCCG 60.953 63.158 0.00 0.00 36.24 5.69
202 203 0.879400 CTGATCGCATCTGGACTGCC 60.879 60.000 0.00 0.00 36.24 4.85
203 204 0.103755 TCTGATCGCATCTGGACTGC 59.896 55.000 0.00 0.00 36.26 4.40
204 205 1.868930 GCTCTGATCGCATCTGGACTG 60.869 57.143 0.00 0.00 0.00 3.51
205 206 0.388659 GCTCTGATCGCATCTGGACT 59.611 55.000 0.00 0.00 0.00 3.85
206 207 0.599728 GGCTCTGATCGCATCTGGAC 60.600 60.000 0.00 0.00 0.00 4.02
335 339 1.153353 CGTTGTTTCCGGCTGTGTAT 58.847 50.000 0.00 0.00 0.00 2.29
342 346 0.248702 TGCTTTTCGTTGTTTCCGGC 60.249 50.000 0.00 0.00 0.00 6.13
359 363 6.089417 CCAAGTTCGATCCAATTTTTACTTGC 59.911 38.462 11.83 0.00 39.69 4.01
364 368 4.464597 CCCCCAAGTTCGATCCAATTTTTA 59.535 41.667 0.00 0.00 0.00 1.52
365 369 3.260632 CCCCCAAGTTCGATCCAATTTTT 59.739 43.478 0.00 0.00 0.00 1.94
451 1376 1.519455 GTCGGTCGGCAATGAGGAG 60.519 63.158 0.00 0.00 0.00 3.69
477 1402 5.042463 TGGTAAGAGATTGGTTGTTGTCA 57.958 39.130 0.00 0.00 0.00 3.58
495 1420 8.635328 GGTTCCTTTCTATTTTTGTTCTTGGTA 58.365 33.333 0.00 0.00 0.00 3.25
497 1422 7.496747 TGGTTCCTTTCTATTTTTGTTCTTGG 58.503 34.615 0.00 0.00 0.00 3.61
498 1423 8.413229 TCTGGTTCCTTTCTATTTTTGTTCTTG 58.587 33.333 0.00 0.00 0.00 3.02
500 1425 7.255625 GCTCTGGTTCCTTTCTATTTTTGTTCT 60.256 37.037 0.00 0.00 0.00 3.01
501 1426 6.863645 GCTCTGGTTCCTTTCTATTTTTGTTC 59.136 38.462 0.00 0.00 0.00 3.18
502 1427 6.323739 TGCTCTGGTTCCTTTCTATTTTTGTT 59.676 34.615 0.00 0.00 0.00 2.83
504 1429 6.331369 TGCTCTGGTTCCTTTCTATTTTTG 57.669 37.500 0.00 0.00 0.00 2.44
514 1439 3.441572 CGAATCAATTGCTCTGGTTCCTT 59.558 43.478 0.00 0.00 31.38 3.36
528 1453 3.455910 TCATTCCACCTCCTCGAATCAAT 59.544 43.478 0.00 0.00 0.00 2.57
543 1468 4.872124 CACACGAGATTTCTGATCATTCCA 59.128 41.667 0.00 0.00 0.00 3.53
579 1504 4.301637 TGCAGAATGAATCATGTGCATC 57.698 40.909 22.30 6.60 38.70 3.91
637 1562 0.386731 GTTCGTGCGAATTTGGTGGG 60.387 55.000 10.26 0.00 36.45 4.61
649 1577 2.058798 TCTTGTCTCGATTGTTCGTGC 58.941 47.619 0.00 0.00 45.65 5.34
705 1633 3.702548 AGGCGTTACTTTTGTTTTTCCCT 59.297 39.130 0.00 0.00 0.00 4.20
706 1634 4.049546 AGGCGTTACTTTTGTTTTTCCC 57.950 40.909 0.00 0.00 0.00 3.97
714 1658 3.932710 TCTCATGCTAGGCGTTACTTTTG 59.067 43.478 0.00 0.00 0.00 2.44
716 1660 3.887621 TCTCATGCTAGGCGTTACTTT 57.112 42.857 0.00 0.00 0.00 2.66
724 1668 0.669932 CGCTGGATCTCATGCTAGGC 60.670 60.000 0.00 0.00 0.00 3.93
750 1694 7.458409 AAATCTCAGCTGAATCTTTTGCTTA 57.542 32.000 18.85 0.00 33.03 3.09
766 1710 2.817423 GCCGCAGCCGAAATCTCAG 61.817 63.158 0.00 0.00 36.29 3.35
801 1745 0.976590 GGCTAGGGTTCCTTCGTCCT 60.977 60.000 0.00 0.00 34.61 3.85
803 1747 0.175989 CAGGCTAGGGTTCCTTCGTC 59.824 60.000 0.00 0.00 34.61 4.20
820 1764 4.760047 CGGTTCGGCCCAGTCCAG 62.760 72.222 0.00 0.00 0.00 3.86
843 1787 4.310769 CATCTATAAAACCAGAGCGAGGG 58.689 47.826 0.00 0.00 0.00 4.30
846 1790 4.649674 AGACCATCTATAAAACCAGAGCGA 59.350 41.667 0.00 0.00 0.00 4.93
847 1791 4.950050 AGACCATCTATAAAACCAGAGCG 58.050 43.478 0.00 0.00 0.00 5.03
877 1821 3.316573 CTTCCCAGTGACTCGCCCC 62.317 68.421 0.00 0.00 0.00 5.80
906 1851 2.101575 TGCGCGATCGACTGGTAC 59.898 61.111 21.57 0.00 38.10 3.34
923 1868 4.796231 GATGCGCGAGTGGACGGT 62.796 66.667 12.10 0.00 0.00 4.83
1018 1963 1.437986 CGACCTCAATCTCCCGGAC 59.562 63.158 0.73 0.00 0.00 4.79
1019 1964 1.756950 CCGACCTCAATCTCCCGGA 60.757 63.158 0.73 0.00 39.31 5.14
1020 1965 2.017559 GACCGACCTCAATCTCCCGG 62.018 65.000 0.00 0.00 42.30 5.73
1021 1966 1.437986 GACCGACCTCAATCTCCCG 59.562 63.158 0.00 0.00 0.00 5.14
1095 2040 4.821589 GCTTCGTGCTCGGGGAGG 62.822 72.222 8.49 0.00 38.95 4.30
1106 2063 2.736236 CGTCTGCTGCTGCTTCGT 60.736 61.111 17.00 0.00 40.48 3.85
1120 2077 3.173240 GAGAAGACGGCGTGCGTC 61.173 66.667 21.19 16.34 36.71 5.19
1206 2163 4.452733 GCAACGGAGGGAGGACGG 62.453 72.222 0.00 0.00 0.00 4.79
1207 2164 3.649277 CTGCAACGGAGGGAGGACG 62.649 68.421 0.00 0.00 0.00 4.79
1208 2165 1.617947 ATCTGCAACGGAGGGAGGAC 61.618 60.000 0.00 0.00 0.00 3.85
1209 2166 0.909610 AATCTGCAACGGAGGGAGGA 60.910 55.000 0.00 0.00 0.00 3.71
1242 2199 4.240096 CCATTGCTGTCAAGAAAATCACC 58.760 43.478 0.00 0.00 35.37 4.02
1369 2329 6.673316 GCAGTGAACGAATGGAGAAGAATAAC 60.673 42.308 0.00 0.00 0.00 1.89
1373 2333 3.067106 GCAGTGAACGAATGGAGAAGAA 58.933 45.455 0.00 0.00 0.00 2.52
1380 2340 0.877071 AAGCAGCAGTGAACGAATGG 59.123 50.000 0.00 0.00 0.00 3.16
1416 2383 6.865205 AGATTGTTTAAAACTGAGATTGCAGC 59.135 34.615 0.00 0.00 39.51 5.25
1434 2401 6.546484 TCCTCTGGAAGAAATTGAGATTGTT 58.454 36.000 0.00 0.00 46.34 2.83
1435 2402 6.131972 TCCTCTGGAAGAAATTGAGATTGT 57.868 37.500 0.00 0.00 46.34 2.71
1449 2416 2.646175 CCGCGGTCTTCCTCTGGAA 61.646 63.158 19.50 0.00 39.66 3.53
1513 2480 6.658391 AGTTTGCAGAGAAAGAAGAGCATTAT 59.342 34.615 0.00 0.00 0.00 1.28
1514 2481 6.000219 AGTTTGCAGAGAAAGAAGAGCATTA 59.000 36.000 0.00 0.00 0.00 1.90
1515 2482 4.826183 AGTTTGCAGAGAAAGAAGAGCATT 59.174 37.500 0.00 0.00 0.00 3.56
1516 2483 4.215827 CAGTTTGCAGAGAAAGAAGAGCAT 59.784 41.667 0.00 0.00 0.00 3.79
1554 2521 1.079127 AATCTGAACTGGGACCGCG 60.079 57.895 0.00 0.00 0.00 6.46
1555 2522 1.026718 CCAATCTGAACTGGGACCGC 61.027 60.000 2.06 0.00 0.00 5.68
1556 2523 0.613260 TCCAATCTGAACTGGGACCG 59.387 55.000 8.74 0.00 33.19 4.79
1557 2524 2.879103 TTCCAATCTGAACTGGGACC 57.121 50.000 8.74 0.00 33.19 4.46
1797 2769 6.713762 TGAACTTCATCAAGATGGTTTGTT 57.286 33.333 9.96 9.39 39.24 2.83
1811 2783 5.666969 TTGAACGAACGAATGAACTTCAT 57.333 34.783 0.14 0.00 39.09 2.57
1838 2810 1.131126 CAACGTCATGAGAATGGTGCC 59.869 52.381 0.00 0.00 0.00 5.01
1991 2964 4.414337 AGAGAGATACAATGAAGGCACC 57.586 45.455 0.00 0.00 0.00 5.01
2318 3320 4.871933 TTAGTGTGTCTGCTGAATCTGA 57.128 40.909 0.00 0.00 0.00 3.27
2437 3443 9.353999 GTAAAATCCACATTCTGAATTTACACC 57.646 33.333 0.00 0.00 34.07 4.16
2445 3451 7.334421 GCTAGACTGTAAAATCCACATTCTGAA 59.666 37.037 0.00 0.00 36.79 3.02
2458 3464 6.765989 ACACACATTGAAGCTAGACTGTAAAA 59.234 34.615 0.00 0.00 0.00 1.52
2462 3468 4.342862 ACACACATTGAAGCTAGACTGT 57.657 40.909 0.00 0.00 0.00 3.55
2464 3471 6.936900 ACATAAACACACATTGAAGCTAGACT 59.063 34.615 0.00 0.00 0.00 3.24
2476 3483 3.840468 CAGCATGCACATAAACACACAT 58.160 40.909 21.98 0.00 0.00 3.21
2521 3542 7.047891 GGGTGTATACAAGAAGATCACATGAA 58.952 38.462 7.25 0.00 0.00 2.57
2562 3584 0.882474 CGTTATGCCCGGTCCAAAAA 59.118 50.000 0.00 0.00 0.00 1.94
2563 3585 1.587933 GCGTTATGCCCGGTCCAAAA 61.588 55.000 0.00 0.00 37.76 2.44
2564 3586 2.041686 GCGTTATGCCCGGTCCAAA 61.042 57.895 0.00 0.00 37.76 3.28
2565 3587 2.437002 GCGTTATGCCCGGTCCAA 60.437 61.111 0.00 0.00 37.76 3.53
2574 3596 4.632538 AAGTAATGGAAAGGCGTTATGC 57.367 40.909 0.00 0.00 45.38 3.14
2575 3597 7.490962 TGATAAGTAATGGAAAGGCGTTATG 57.509 36.000 0.00 0.00 0.00 1.90
2576 3598 9.787435 TTATGATAAGTAATGGAAAGGCGTTAT 57.213 29.630 0.00 0.00 0.00 1.89
2577 3599 9.787435 ATTATGATAAGTAATGGAAAGGCGTTA 57.213 29.630 0.00 0.00 0.00 3.18
2578 3600 8.567948 CATTATGATAAGTAATGGAAAGGCGTT 58.432 33.333 0.00 0.00 36.41 4.84
2579 3601 8.099364 CATTATGATAAGTAATGGAAAGGCGT 57.901 34.615 0.00 0.00 36.41 5.68
2590 3612 9.403583 GTGAAGGGTTTCCATTATGATAAGTAA 57.596 33.333 0.00 0.00 34.83 2.24
2591 3613 8.553153 TGTGAAGGGTTTCCATTATGATAAGTA 58.447 33.333 0.00 0.00 34.83 2.24
2592 3614 7.410174 TGTGAAGGGTTTCCATTATGATAAGT 58.590 34.615 0.00 0.00 34.83 2.24
2593 3615 7.880160 TGTGAAGGGTTTCCATTATGATAAG 57.120 36.000 0.00 0.00 34.83 1.73
2594 3616 9.928618 TTATGTGAAGGGTTTCCATTATGATAA 57.071 29.630 0.00 0.00 34.83 1.75
2595 3617 9.573166 CTTATGTGAAGGGTTTCCATTATGATA 57.427 33.333 0.00 0.00 34.83 2.15
2596 3618 8.281531 TCTTATGTGAAGGGTTTCCATTATGAT 58.718 33.333 0.00 0.00 34.83 2.45
2597 3619 7.638444 TCTTATGTGAAGGGTTTCCATTATGA 58.362 34.615 0.00 0.00 34.83 2.15
2598 3620 7.880160 TCTTATGTGAAGGGTTTCCATTATG 57.120 36.000 0.00 0.00 34.83 1.90
2599 3621 7.506938 CCATCTTATGTGAAGGGTTTCCATTAT 59.493 37.037 0.00 0.00 34.83 1.28
2600 3622 6.833416 CCATCTTATGTGAAGGGTTTCCATTA 59.167 38.462 0.00 0.00 34.83 1.90
2601 3623 5.658190 CCATCTTATGTGAAGGGTTTCCATT 59.342 40.000 0.00 0.00 34.83 3.16
2602 3624 5.044179 TCCATCTTATGTGAAGGGTTTCCAT 60.044 40.000 0.00 0.00 34.83 3.41
2603 3625 4.290985 TCCATCTTATGTGAAGGGTTTCCA 59.709 41.667 0.00 0.00 34.83 3.53
2604 3626 4.855340 TCCATCTTATGTGAAGGGTTTCC 58.145 43.478 0.00 0.00 32.09 3.13
2605 3627 7.054124 TGTATCCATCTTATGTGAAGGGTTTC 58.946 38.462 0.00 0.00 0.00 2.78
2606 3628 6.969043 TGTATCCATCTTATGTGAAGGGTTT 58.031 36.000 0.00 0.00 0.00 3.27
2607 3629 6.386927 TCTGTATCCATCTTATGTGAAGGGTT 59.613 38.462 0.00 0.00 0.00 4.11
2691 3727 0.927537 TGCACACGTCAGAAAGAACG 59.072 50.000 0.00 0.00 0.00 3.95
2725 3761 5.354234 GTGGGTACAATTGACATCGATTTCT 59.646 40.000 13.59 0.00 0.00 2.52
2777 3813 7.664758 CAGACATGATATCTCCACTGTGATTA 58.335 38.462 9.86 0.00 0.00 1.75
2795 3831 1.141019 GCCATTGCCTGCAGACATG 59.859 57.895 17.39 13.34 0.00 3.21
2799 3835 1.969085 CTTTGCCATTGCCTGCAGA 59.031 52.632 17.39 0.00 38.95 4.26
2823 3859 4.509230 TCTTTCAGATCATCATAACGCTGC 59.491 41.667 0.00 0.00 0.00 5.25
2862 3898 7.291411 ACTCTGTACTGAAACAGTAACATCT 57.709 36.000 12.22 0.00 46.55 2.90
2975 4011 3.315191 CACGTCTGGAAGGTGTTCAATTT 59.685 43.478 0.00 0.00 38.63 1.82
2978 4014 1.474320 CCACGTCTGGAAGGTGTTCAA 60.474 52.381 0.00 0.00 41.22 2.69
3098 4139 1.216122 TTTGCGCTTTGTCCAATTGC 58.784 45.000 9.73 0.00 0.00 3.56
3124 4165 1.402787 AAAAGGCCCCATATTCAGCG 58.597 50.000 0.00 0.00 0.00 5.18
3160 4203 5.539048 ACGTCACCATTAGCTATATTCACC 58.461 41.667 0.00 0.00 0.00 4.02
3203 4246 5.869753 ATCCGACTCACAATCTGAAAAAG 57.130 39.130 0.00 0.00 0.00 2.27
3345 4388 4.210328 CGGTGCGCACTATGTATATGAAAA 59.790 41.667 36.84 0.00 0.00 2.29
3365 4408 1.000896 CCCCAAAGCCTTCATCGGT 60.001 57.895 0.00 0.00 0.00 4.69
3390 4433 5.534452 TGTCGTGAAAGACTCGTTTACACG 61.534 45.833 0.00 0.00 46.61 4.49
3391 4434 3.792956 TGTCGTGAAAGACTCGTTTACAC 59.207 43.478 0.00 0.00 41.47 2.90
3392 4435 4.031418 TGTCGTGAAAGACTCGTTTACA 57.969 40.909 1.64 0.00 41.47 2.41
3393 4436 5.571778 AATGTCGTGAAAGACTCGTTTAC 57.428 39.130 0.00 0.00 41.47 2.01
3394 4437 8.239314 ACTATAATGTCGTGAAAGACTCGTTTA 58.761 33.333 0.00 0.00 41.47 2.01
3395 4438 7.088905 ACTATAATGTCGTGAAAGACTCGTTT 58.911 34.615 0.00 0.00 41.47 3.60
3396 4439 6.618811 ACTATAATGTCGTGAAAGACTCGTT 58.381 36.000 0.00 0.00 41.47 3.85
3426 4480 0.969894 AACTTGCAGCGAGGAGTACT 59.030 50.000 14.59 0.00 0.00 2.73
3511 4565 7.323049 TCCTCTTCTACTTTCTTACTCATCG 57.677 40.000 0.00 0.00 0.00 3.84
3512 4571 7.147983 TGCTCCTCTTCTACTTTCTTACTCATC 60.148 40.741 0.00 0.00 0.00 2.92
3539 4598 5.917462 TGACTTTCATCAAGAGTGAACTGA 58.083 37.500 0.00 0.00 37.30 3.41
3650 4730 1.076923 GACCGAGTAGAGGCTGGGA 60.077 63.158 0.00 0.00 37.71 4.37
3654 4734 2.829458 GCCGACCGAGTAGAGGCT 60.829 66.667 0.00 0.00 44.06 4.58
3695 4775 2.582436 GACCTCGCCGGAAATGGA 59.418 61.111 5.05 0.00 36.31 3.41
3731 4811 2.674380 AAGCAGGCAAGGCGAAGG 60.674 61.111 0.00 0.00 36.08 3.46
3734 4814 1.672356 GAAGAAGCAGGCAAGGCGA 60.672 57.895 0.00 0.00 36.08 5.54
3737 4817 0.886563 CAAGGAAGAAGCAGGCAAGG 59.113 55.000 0.00 0.00 0.00 3.61
3759 4839 1.298157 CTGCTGAATCGGTTTCGCCA 61.298 55.000 10.70 3.59 37.13 5.69
3761 4841 1.226128 GCTGCTGAATCGGTTTCGC 60.226 57.895 0.00 7.96 37.13 4.70
3783 5201 2.166459 GTCCAAAGATGCCCCTTTTAGC 59.834 50.000 0.00 0.00 34.41 3.09
3793 5211 0.915364 AGGGGAGAGTCCAAAGATGC 59.085 55.000 0.00 0.00 38.64 3.91
3828 5246 5.998363 GGTAACAGGGATGGATTCATTAGAC 59.002 44.000 0.00 0.00 32.98 2.59
3842 5260 2.185387 GCTCTTACAGGGTAACAGGGA 58.815 52.381 0.00 0.00 39.74 4.20
3843 5261 2.168728 GAGCTCTTACAGGGTAACAGGG 59.831 54.545 6.43 0.00 39.74 4.45
3844 5262 2.168728 GGAGCTCTTACAGGGTAACAGG 59.831 54.545 14.64 0.00 39.74 4.00
3845 5263 2.832129 TGGAGCTCTTACAGGGTAACAG 59.168 50.000 14.64 0.00 39.74 3.16
3848 5266 3.908103 AGTTTGGAGCTCTTACAGGGTAA 59.092 43.478 14.64 0.00 0.00 2.85
3850 5268 2.339769 AGTTTGGAGCTCTTACAGGGT 58.660 47.619 14.64 0.00 0.00 4.34
3851 5269 3.077359 CAAGTTTGGAGCTCTTACAGGG 58.923 50.000 14.64 0.00 0.00 4.45
3865 5283 3.057386 TGCTGCATCATACACCAAGTTTG 60.057 43.478 0.00 0.00 0.00 2.93
3866 5284 3.156293 TGCTGCATCATACACCAAGTTT 58.844 40.909 0.00 0.00 0.00 2.66
3867 5285 2.794103 TGCTGCATCATACACCAAGTT 58.206 42.857 0.00 0.00 0.00 2.66
3868 5286 2.495155 TGCTGCATCATACACCAAGT 57.505 45.000 0.00 0.00 0.00 3.16
3869 5287 2.751259 ACTTGCTGCATCATACACCAAG 59.249 45.455 1.84 0.00 35.56 3.61
3870 5288 2.488937 CACTTGCTGCATCATACACCAA 59.511 45.455 1.84 0.00 0.00 3.67
3871 5289 2.086094 CACTTGCTGCATCATACACCA 58.914 47.619 1.84 0.00 0.00 4.17
3872 5290 2.086869 ACACTTGCTGCATCATACACC 58.913 47.619 1.84 0.00 0.00 4.16
3873 5291 4.944962 TTACACTTGCTGCATCATACAC 57.055 40.909 1.84 0.00 0.00 2.90
3874 5292 6.150809 TGAATTTACACTTGCTGCATCATACA 59.849 34.615 1.84 0.00 0.00 2.29
3875 5293 6.554419 TGAATTTACACTTGCTGCATCATAC 58.446 36.000 1.84 0.00 0.00 2.39
3876 5294 6.183360 CCTGAATTTACACTTGCTGCATCATA 60.183 38.462 1.84 0.00 0.00 2.15
3877 5295 5.393787 CCTGAATTTACACTTGCTGCATCAT 60.394 40.000 1.84 0.00 0.00 2.45
3906 5324 2.887568 CGATGCAGCACGGAGTCC 60.888 66.667 1.53 0.00 41.61 3.85
3948 5366 3.228188 TCTGCACCATGGAGTCTTTTT 57.772 42.857 21.47 0.00 37.12 1.94
3949 5367 2.957402 TCTGCACCATGGAGTCTTTT 57.043 45.000 21.47 0.00 37.12 2.27
3950 5368 3.245016 TGAATCTGCACCATGGAGTCTTT 60.245 43.478 21.47 4.52 37.12 2.52
3951 5369 2.306805 TGAATCTGCACCATGGAGTCTT 59.693 45.455 21.47 3.75 37.12 3.01
3952 5370 1.911357 TGAATCTGCACCATGGAGTCT 59.089 47.619 21.47 0.00 37.12 3.24
3953 5371 2.408271 TGAATCTGCACCATGGAGTC 57.592 50.000 21.47 4.67 37.12 3.36
3954 5372 3.021695 CAATGAATCTGCACCATGGAGT 58.978 45.455 21.47 0.00 37.12 3.85
3955 5373 3.021695 ACAATGAATCTGCACCATGGAG 58.978 45.455 21.47 12.70 37.15 3.86
3956 5374 2.756207 CACAATGAATCTGCACCATGGA 59.244 45.455 21.47 0.00 0.00 3.41
3957 5375 2.737359 GCACAATGAATCTGCACCATGG 60.737 50.000 11.19 11.19 0.00 3.66
3958 5376 2.536365 GCACAATGAATCTGCACCATG 58.464 47.619 0.00 0.00 0.00 3.66
3959 5377 1.133598 CGCACAATGAATCTGCACCAT 59.866 47.619 0.00 0.00 0.00 3.55
3960 5378 0.522626 CGCACAATGAATCTGCACCA 59.477 50.000 0.00 0.00 0.00 4.17
3961 5379 0.523072 ACGCACAATGAATCTGCACC 59.477 50.000 0.00 0.00 0.00 5.01
3968 5386 3.671433 GCTGTGATGAACGCACAATGAAT 60.671 43.478 0.00 0.00 44.75 2.57
3973 5391 2.162319 TAGCTGTGATGAACGCACAA 57.838 45.000 0.00 0.00 44.75 3.33
4042 5461 4.567959 GCAAATGGTGGATAGAATTGCAAC 59.432 41.667 0.00 0.00 40.86 4.17
4072 5491 5.360591 CAATGAATCGTAGGCTCTTAACCT 58.639 41.667 0.00 0.00 41.57 3.50
4086 5505 6.805271 GGATCTTATGGAAATGCAATGAATCG 59.195 38.462 0.00 0.00 0.00 3.34
4092 5511 4.282703 GGCAGGATCTTATGGAAATGCAAT 59.717 41.667 0.00 0.00 34.52 3.56
4128 5547 4.034742 GGCACGTCAGAAAGAACAACTAAA 59.965 41.667 0.00 0.00 0.00 1.85
4150 5569 4.916041 TTCTGGCTAAGATGGATATGGG 57.084 45.455 0.00 0.00 33.93 4.00
4158 5577 4.340097 TGGCATCAATTTCTGGCTAAGATG 59.660 41.667 10.71 0.00 38.64 2.90
4183 5602 3.609853 TGTCACCTTTCAGATGGTATGC 58.390 45.455 0.00 0.00 34.79 3.14
4190 5609 2.107204 ACAAGCCTGTCACCTTTCAGAT 59.893 45.455 0.00 0.00 34.02 2.90
4203 5622 6.094464 TGTGATTAGATTGATTCACAAGCCTG 59.906 38.462 2.35 0.00 44.75 4.85
4240 5659 2.472909 GCCCATCGCCTGCAAGTAC 61.473 63.158 0.00 0.00 0.00 2.73
4242 5661 3.866379 TTGCCCATCGCCTGCAAGT 62.866 57.895 0.00 0.00 39.86 3.16
4289 5708 8.556213 TGTGTTAACTGTCTTTAGTGAACTTT 57.444 30.769 7.22 0.00 40.97 2.66
4291 5710 8.448615 GTTTGTGTTAACTGTCTTTAGTGAACT 58.551 33.333 7.22 0.00 40.97 3.01
4292 5711 8.448615 AGTTTGTGTTAACTGTCTTTAGTGAAC 58.551 33.333 7.22 0.00 40.83 3.18
4293 5712 8.447833 CAGTTTGTGTTAACTGTCTTTAGTGAA 58.552 33.333 7.22 0.00 46.27 3.18
4294 5713 7.970384 CAGTTTGTGTTAACTGTCTTTAGTGA 58.030 34.615 7.22 0.00 46.27 3.41
4325 5744 8.401046 TGAACTTTTCGAAAAATTCACGATTT 57.599 26.923 32.16 9.57 38.65 2.17
4327 5746 7.860373 TCATGAACTTTTCGAAAAATTCACGAT 59.140 29.630 35.85 23.94 43.87 3.73
4328 5747 7.190191 TCATGAACTTTTCGAAAAATTCACGA 58.810 30.769 35.85 32.29 43.87 4.35
4329 5748 7.375230 TCATGAACTTTTCGAAAAATTCACG 57.625 32.000 35.85 30.97 43.87 4.35
4431 5850 9.889128 TTTTCTCAAATTTTCATGAACCTCTTT 57.111 25.926 7.89 3.12 0.00 2.52
4432 5851 9.538508 CTTTTCTCAAATTTTCATGAACCTCTT 57.461 29.630 7.89 0.00 0.00 2.85
4433 5852 8.699130 ACTTTTCTCAAATTTTCATGAACCTCT 58.301 29.630 7.89 0.00 0.00 3.69
4435 5854 9.317936 GAACTTTTCTCAAATTTTCATGAACCT 57.682 29.630 7.89 0.00 0.00 3.50
4436 5855 9.097257 TGAACTTTTCTCAAATTTTCATGAACC 57.903 29.630 7.89 0.00 0.00 3.62
4437 5856 9.906111 GTGAACTTTTCTCAAATTTTCATGAAC 57.094 29.630 7.89 0.00 31.36 3.18
4509 5928 8.093927 TGAACTTTTCCAACTTCATGAACTTTT 58.906 29.630 3.38 0.00 0.00 2.27
4510 5929 7.545615 GTGAACTTTTCCAACTTCATGAACTTT 59.454 33.333 3.38 0.00 0.00 2.66
4511 5930 7.035612 GTGAACTTTTCCAACTTCATGAACTT 58.964 34.615 3.38 0.00 0.00 2.66
4512 5931 6.152661 TGTGAACTTTTCCAACTTCATGAACT 59.847 34.615 3.38 0.00 0.00 3.01
4513 5932 6.329496 TGTGAACTTTTCCAACTTCATGAAC 58.671 36.000 3.38 0.00 0.00 3.18
4515 5934 6.522625 TTGTGAACTTTTCCAACTTCATGA 57.477 33.333 0.00 0.00 0.00 3.07
4517 5936 8.667463 CAAATTTGTGAACTTTTCCAACTTCAT 58.333 29.630 10.15 0.00 0.00 2.57
4518 5937 7.875041 TCAAATTTGTGAACTTTTCCAACTTCA 59.125 29.630 17.47 0.00 0.00 3.02
4519 5938 8.250538 TCAAATTTGTGAACTTTTCCAACTTC 57.749 30.769 17.47 0.00 0.00 3.01
4521 5940 7.610865 TCTCAAATTTGTGAACTTTTCCAACT 58.389 30.769 18.09 0.00 0.00 3.16
4522 5941 7.826260 TCTCAAATTTGTGAACTTTTCCAAC 57.174 32.000 18.09 0.00 0.00 3.77
4524 5943 8.093927 ACTTTCTCAAATTTGTGAACTTTTCCA 58.906 29.630 26.93 14.57 39.51 3.53
4525 5944 8.479313 ACTTTCTCAAATTTGTGAACTTTTCC 57.521 30.769 26.93 0.00 39.51 3.13
4526 5945 9.958285 GAACTTTCTCAAATTTGTGAACTTTTC 57.042 29.630 26.93 23.28 39.51 2.29
4527 5946 9.487790 TGAACTTTCTCAAATTTGTGAACTTTT 57.512 25.926 26.93 20.73 39.51 2.27
4529 5948 7.273381 CGTGAACTTTCTCAAATTTGTGAACTT 59.727 33.333 26.93 21.57 39.51 2.66
4531 5950 6.506357 GCGTGAACTTTCTCAAATTTGTGAAC 60.506 38.462 26.93 18.69 39.51 3.18
4532 5951 5.514914 GCGTGAACTTTCTCAAATTTGTGAA 59.485 36.000 24.55 24.55 38.46 3.18
4535 5954 5.248870 AGCGTGAACTTTCTCAAATTTGT 57.751 34.783 17.47 0.00 0.00 2.83
4536 5955 6.573617 AAAGCGTGAACTTTCTCAAATTTG 57.426 33.333 12.15 12.15 34.84 2.32
4537 5956 6.811170 TCAAAAGCGTGAACTTTCTCAAATTT 59.189 30.769 0.00 0.00 38.92 1.82
4538 5957 6.329496 TCAAAAGCGTGAACTTTCTCAAATT 58.671 32.000 0.00 0.00 38.92 1.82
4539 5958 5.890334 TCAAAAGCGTGAACTTTCTCAAAT 58.110 33.333 0.00 0.00 38.92 2.32
4541 5960 4.955925 TCAAAAGCGTGAACTTTCTCAA 57.044 36.364 0.00 0.00 38.92 3.02
4542 5961 4.955925 TTCAAAAGCGTGAACTTTCTCA 57.044 36.364 0.00 0.00 38.92 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.