Multiple sequence alignment - TraesCS3A01G080700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G080700 chr3A 100.000 5406 0 0 1 5406 52352420 52347015 0.000000e+00 9984.0
1 TraesCS3A01G080700 chr3D 92.077 3370 161 51 712 4042 40255948 40252646 0.000000e+00 4647.0
2 TraesCS3A01G080700 chr3D 90.901 1143 77 12 4124 5261 40252647 40251527 0.000000e+00 1509.0
3 TraesCS3A01G080700 chr3D 79.463 745 91 33 965 1694 165548880 165548183 6.340000e-129 472.0
4 TraesCS3A01G080700 chr3D 92.553 94 7 0 4032 4125 450878879 450878786 9.440000e-28 135.0
5 TraesCS3A01G080700 chr3D 79.412 102 17 4 448 548 384865602 384865700 9.720000e-08 69.4
6 TraesCS3A01G080700 chr3B 91.773 2674 121 44 640 3294 63472546 63469953 0.000000e+00 3627.0
7 TraesCS3A01G080700 chr3B 91.849 1374 72 26 3294 4632 63469866 63468498 0.000000e+00 1881.0
8 TraesCS3A01G080700 chr3B 85.691 615 72 11 4667 5275 63468508 63467904 7.640000e-178 634.0
9 TraesCS3A01G080700 chr3B 85.405 185 16 2 199 383 63473120 63472947 1.200000e-41 182.0
10 TraesCS3A01G080700 chr3B 77.220 259 21 14 695 952 63475915 63475694 3.420000e-22 117.0
11 TraesCS3A01G080700 chr3B 77.778 126 18 8 427 548 384435307 384435188 9.720000e-08 69.4
12 TraesCS3A01G080700 chr7D 81.537 1809 223 63 2255 4039 155693584 155695305 0.000000e+00 1387.0
13 TraesCS3A01G080700 chr7D 79.492 590 81 21 1445 2017 155691263 155691829 3.050000e-102 383.0
14 TraesCS3A01G080700 chr7D 80.498 241 25 9 1795 2017 155692054 155692290 1.200000e-36 165.0
15 TraesCS3A01G080700 chr7D 78.279 244 30 5 1795 2020 155692287 155692525 9.440000e-28 135.0
16 TraesCS3A01G080700 chr7D 90.196 102 9 1 4041 4142 474349146 474349046 1.220000e-26 132.0
17 TraesCS3A01G080700 chr7D 77.311 238 33 13 1795 2017 155691826 155692057 2.640000e-23 121.0
18 TraesCS3A01G080700 chr7D 100.000 32 0 0 352 383 614704961 614704992 5.850000e-05 60.2
19 TraesCS3A01G080700 chr7B 81.739 1380 182 48 2255 3617 117624725 117626051 0.000000e+00 1088.0
20 TraesCS3A01G080700 chr7B 77.574 981 139 51 1083 2017 117622009 117622954 8.030000e-143 518.0
21 TraesCS3A01G080700 chr7B 75.535 748 128 33 1078 1809 117614524 117615232 3.140000e-82 316.0
22 TraesCS3A01G080700 chr7B 79.668 241 27 9 1795 2017 117623196 117623432 2.610000e-33 154.0
23 TraesCS3A01G080700 chr7B 79.508 244 27 6 1795 2020 117623429 117623667 9.380000e-33 152.0
24 TraesCS3A01G080700 chr7B 89.362 47 2 3 543 588 653226115 653226071 7.560000e-04 56.5
25 TraesCS3A01G080700 chr7B 89.362 47 2 3 543 588 653231156 653231112 7.560000e-04 56.5
26 TraesCS3A01G080700 chr7B 89.362 47 2 3 543 588 653236145 653236101 7.560000e-04 56.5
27 TraesCS3A01G080700 chr7B 89.362 47 2 3 543 588 653285893 653285849 7.560000e-04 56.5
28 TraesCS3A01G080700 chr7A 81.602 1386 177 52 2255 3617 157401276 157402606 0.000000e+00 1075.0
29 TraesCS3A01G080700 chr7A 76.860 981 146 51 1083 2017 157398578 157399523 3.790000e-131 479.0
30 TraesCS3A01G080700 chr7A 76.848 717 115 29 1109 1809 157393419 157394100 1.850000e-94 357.0
31 TraesCS3A01G080700 chr7A 79.508 244 27 6 1795 2020 157399981 157400219 9.380000e-33 152.0
32 TraesCS3A01G080700 chr7A 77.311 238 33 13 1795 2017 157399520 157399751 2.640000e-23 121.0
33 TraesCS3A01G080700 chr6B 80.125 961 114 42 965 1913 68102496 68103391 0.000000e+00 645.0
34 TraesCS3A01G080700 chr6B 88.235 51 6 0 333 383 91854183 91854133 1.630000e-05 62.1
35 TraesCS3A01G080700 chr6B 90.698 43 2 2 543 584 20704923 20704964 7.560000e-04 56.5
36 TraesCS3A01G080700 chr6B 97.059 34 0 1 543 575 674934845 674934812 7.560000e-04 56.5
37 TraesCS3A01G080700 chr5D 84.667 150 19 3 399 547 85566773 85566919 4.360000e-31 147.0
38 TraesCS3A01G080700 chr5D 96.970 33 0 1 543 574 362053874 362053906 3.000000e-03 54.7
39 TraesCS3A01G080700 chr5A 85.417 144 17 3 400 543 196838695 196838834 4.360000e-31 147.0
40 TraesCS3A01G080700 chr6D 94.444 90 5 0 4039 4128 403969209 403969120 7.300000e-29 139.0
41 TraesCS3A01G080700 chr1A 92.708 96 7 0 4034 4129 297375910 297376005 7.300000e-29 139.0
42 TraesCS3A01G080700 chr1A 77.099 131 24 5 420 548 479147950 479148076 2.700000e-08 71.3
43 TraesCS3A01G080700 chr6A 91.176 102 8 1 4032 4132 26813428 26813529 2.630000e-28 137.0
44 TraesCS3A01G080700 chr6A 78.788 99 18 2 446 544 89592032 89591937 4.520000e-06 63.9
45 TraesCS3A01G080700 chr6A 90.698 43 4 0 446 488 582803665 582803623 2.100000e-04 58.4
46 TraesCS3A01G080700 chr2D 95.294 85 4 0 4041 4125 128890639 128890723 9.440000e-28 135.0
47 TraesCS3A01G080700 chr2A 91.753 97 6 1 4040 4134 202889825 202889729 3.400000e-27 134.0
48 TraesCS3A01G080700 chr2A 87.719 114 9 3 4041 4150 35964135 35964023 1.580000e-25 128.0
49 TraesCS3A01G080700 chr2A 100.000 32 0 0 352 383 738064794 738064763 5.850000e-05 60.2
50 TraesCS3A01G080700 chr1B 90.000 100 10 0 4030 4129 598882705 598882804 4.390000e-26 130.0
51 TraesCS3A01G080700 chr1B 80.682 88 14 3 403 489 623671520 623671605 1.260000e-06 65.8
52 TraesCS3A01G080700 chr4A 77.692 130 20 6 420 547 552263284 552263406 2.700000e-08 71.3
53 TraesCS3A01G080700 chr4A 76.800 125 22 5 420 543 552262794 552262912 4.520000e-06 63.9
54 TraesCS3A01G080700 chr4B 94.595 37 0 2 543 577 167705704 167705740 7.560000e-04 56.5
55 TraesCS3A01G080700 chr5B 96.970 33 0 1 543 574 388728336 388728368 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G080700 chr3A 52347015 52352420 5405 True 9984.00 9984 100.00000 1 5406 1 chr3A.!!$R1 5405
1 TraesCS3A01G080700 chr3D 40251527 40255948 4421 True 3078.00 4647 91.48900 712 5261 2 chr3D.!!$R3 4549
2 TraesCS3A01G080700 chr3D 165548183 165548880 697 True 472.00 472 79.46300 965 1694 1 chr3D.!!$R1 729
3 TraesCS3A01G080700 chr3B 63467904 63475915 8011 True 1288.20 3627 86.38760 199 5275 5 chr3B.!!$R2 5076
4 TraesCS3A01G080700 chr7D 155691263 155695305 4042 False 438.20 1387 79.42340 1445 4039 5 chr7D.!!$F2 2594
5 TraesCS3A01G080700 chr7B 117622009 117626051 4042 False 478.00 1088 79.62225 1083 3617 4 chr7B.!!$F2 2534
6 TraesCS3A01G080700 chr7B 117614524 117615232 708 False 316.00 316 75.53500 1078 1809 1 chr7B.!!$F1 731
7 TraesCS3A01G080700 chr7A 157398578 157402606 4028 False 456.75 1075 78.82025 1083 3617 4 chr7A.!!$F2 2534
8 TraesCS3A01G080700 chr7A 157393419 157394100 681 False 357.00 357 76.84800 1109 1809 1 chr7A.!!$F1 700
9 TraesCS3A01G080700 chr6B 68102496 68103391 895 False 645.00 645 80.12500 965 1913 1 chr6B.!!$F2 948

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
103 104 0.533951 GGGCCTCTTTGATTTGCAGG 59.466 55.0 0.84 0.0 0.00 4.85 F
343 2941 0.606604 TTACACGCTCCCTCTGTTCC 59.393 55.0 0.00 0.0 0.00 3.62 F
1572 4564 0.036875 AGCTTCTGCAGGTTACACCC 59.963 55.0 15.13 0.0 42.74 4.61 F
1575 4567 0.109723 TTCTGCAGGTTACACCCACC 59.890 55.0 15.13 0.0 39.75 4.61 F
2020 6004 0.801251 CAAGAAGCTGAAGAAGGGCG 59.199 55.0 0.00 0.0 0.00 6.13 F
3857 9027 1.388547 TAATGCGCCAAGGTTCATCC 58.611 50.0 4.18 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 4564 0.323178 ATCAGCTTGGCTCTTGGGTG 60.323 55.000 0.00 0.0 36.40 4.61 R
1575 4567 0.963856 TGCATCAGCTTGGCTCTTGG 60.964 55.000 3.06 0.0 42.74 3.61 R
3519 8681 0.700564 ATGCAAGAGGCTTGGGAAGA 59.299 50.000 9.01 0.0 45.15 2.87 R
3752 8922 4.500035 GGCTTTGTCCTAAGTAGATCTCCG 60.500 50.000 0.00 0.0 0.00 4.63 R
4113 9283 7.620094 ACAACATCTAAATACTACTCCCTCTGT 59.380 37.037 0.00 0.0 0.00 3.41 R
5323 10612 0.168128 GCAGTTGTGCGGGATTGTAC 59.832 55.000 0.00 0.0 40.71 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.657013 TGTATGTGTTTGTGCTATGGGAA 58.343 39.130 0.00 0.00 0.00 3.97
24 25 5.714333 TGTATGTGTTTGTGCTATGGGAAAT 59.286 36.000 0.00 0.00 0.00 2.17
25 26 4.782019 TGTGTTTGTGCTATGGGAAATC 57.218 40.909 0.00 0.00 0.00 2.17
26 27 4.148079 TGTGTTTGTGCTATGGGAAATCA 58.852 39.130 0.00 0.00 0.00 2.57
27 28 4.771577 TGTGTTTGTGCTATGGGAAATCAT 59.228 37.500 0.00 0.00 0.00 2.45
28 29 5.948758 TGTGTTTGTGCTATGGGAAATCATA 59.051 36.000 0.00 0.00 0.00 2.15
29 30 6.606796 TGTGTTTGTGCTATGGGAAATCATAT 59.393 34.615 0.00 0.00 0.00 1.78
30 31 7.123997 TGTGTTTGTGCTATGGGAAATCATATT 59.876 33.333 0.00 0.00 0.00 1.28
31 32 7.436080 GTGTTTGTGCTATGGGAAATCATATTG 59.564 37.037 0.00 0.00 0.00 1.90
32 33 7.123997 TGTTTGTGCTATGGGAAATCATATTGT 59.876 33.333 0.00 0.00 0.00 2.71
34 35 7.744087 TGTGCTATGGGAAATCATATTGTAC 57.256 36.000 0.00 0.00 0.00 2.90
35 36 6.714810 TGTGCTATGGGAAATCATATTGTACC 59.285 38.462 0.00 0.00 0.00 3.34
36 37 6.714810 GTGCTATGGGAAATCATATTGTACCA 59.285 38.462 0.00 0.00 0.00 3.25
38 39 7.949565 TGCTATGGGAAATCATATTGTACCAAT 59.050 33.333 0.00 0.00 0.00 3.16
39 40 8.462016 GCTATGGGAAATCATATTGTACCAATC 58.538 37.037 0.00 0.00 0.00 2.67
41 42 7.581213 TGGGAAATCATATTGTACCAATCAC 57.419 36.000 0.00 0.00 0.00 3.06
43 44 6.015434 GGGAAATCATATTGTACCAATCACCC 60.015 42.308 0.00 0.00 0.00 4.61
44 45 6.293955 GGAAATCATATTGTACCAATCACCCG 60.294 42.308 0.00 0.00 0.00 5.28
45 46 4.764050 TCATATTGTACCAATCACCCGT 57.236 40.909 0.00 0.00 0.00 5.28
46 47 5.105567 TCATATTGTACCAATCACCCGTT 57.894 39.130 0.00 0.00 0.00 4.44
47 48 5.120399 TCATATTGTACCAATCACCCGTTC 58.880 41.667 0.00 0.00 0.00 3.95
48 49 2.932855 TTGTACCAATCACCCGTTCA 57.067 45.000 0.00 0.00 0.00 3.18
49 50 2.932855 TGTACCAATCACCCGTTCAA 57.067 45.000 0.00 0.00 0.00 2.69
54 55 2.962421 ACCAATCACCCGTTCAACAAAT 59.038 40.909 0.00 0.00 0.00 2.32
56 57 4.585162 ACCAATCACCCGTTCAACAAATTA 59.415 37.500 0.00 0.00 0.00 1.40
57 58 5.160641 CCAATCACCCGTTCAACAAATTAG 58.839 41.667 0.00 0.00 0.00 1.73
58 59 5.278758 CCAATCACCCGTTCAACAAATTAGT 60.279 40.000 0.00 0.00 0.00 2.24
60 61 7.364200 CAATCACCCGTTCAACAAATTAGTTA 58.636 34.615 0.00 0.00 0.00 2.24
61 62 6.303021 TCACCCGTTCAACAAATTAGTTAC 57.697 37.500 0.00 0.00 0.00 2.50
62 63 6.056884 TCACCCGTTCAACAAATTAGTTACT 58.943 36.000 0.00 0.00 0.00 2.24
63 64 7.215789 TCACCCGTTCAACAAATTAGTTACTA 58.784 34.615 0.00 0.00 0.00 1.82
64 65 7.714377 TCACCCGTTCAACAAATTAGTTACTAA 59.286 33.333 7.32 7.32 0.00 2.24
65 66 7.799914 CACCCGTTCAACAAATTAGTTACTAAC 59.200 37.037 7.00 0.00 0.00 2.34
66 67 7.041167 ACCCGTTCAACAAATTAGTTACTAACC 60.041 37.037 7.00 0.00 0.00 2.85
67 68 7.041235 CCCGTTCAACAAATTAGTTACTAACCA 60.041 37.037 7.00 0.00 0.00 3.67
69 70 9.719279 CGTTCAACAAATTAGTTACTAACCAAA 57.281 29.630 7.00 0.00 0.00 3.28
73 74 9.790389 CAACAAATTAGTTACTAACCAAACACA 57.210 29.630 7.00 0.00 0.00 3.72
74 75 9.791820 AACAAATTAGTTACTAACCAAACACAC 57.208 29.630 7.00 0.00 0.00 3.82
75 76 9.181061 ACAAATTAGTTACTAACCAAACACACT 57.819 29.630 7.00 0.00 0.00 3.55
76 77 9.659830 CAAATTAGTTACTAACCAAACACACTC 57.340 33.333 7.00 0.00 0.00 3.51
77 78 9.623000 AAATTAGTTACTAACCAAACACACTCT 57.377 29.630 7.00 0.00 0.00 3.24
78 79 9.623000 AATTAGTTACTAACCAAACACACTCTT 57.377 29.630 7.00 0.00 0.00 2.85
82 83 9.623000 AGTTACTAACCAAACACACTCTTAATT 57.377 29.630 0.00 0.00 0.00 1.40
85 86 8.617290 ACTAACCAAACACACTCTTAATTAGG 57.383 34.615 0.00 0.00 0.00 2.69
86 87 6.894339 AACCAAACACACTCTTAATTAGGG 57.106 37.500 0.00 0.00 0.00 3.53
87 88 4.765339 ACCAAACACACTCTTAATTAGGGC 59.235 41.667 0.00 0.00 0.00 5.19
89 90 4.929146 AACACACTCTTAATTAGGGCCT 57.071 40.909 12.58 12.58 0.00 5.19
91 92 4.104831 ACACACTCTTAATTAGGGCCTCT 58.895 43.478 10.74 0.00 0.00 3.69
92 93 4.536489 ACACACTCTTAATTAGGGCCTCTT 59.464 41.667 10.74 8.03 0.00 2.85
93 94 5.014228 ACACACTCTTAATTAGGGCCTCTTT 59.986 40.000 10.74 7.81 0.00 2.52
94 95 5.355350 CACACTCTTAATTAGGGCCTCTTTG 59.645 44.000 10.74 2.69 0.00 2.77
95 96 5.250774 ACACTCTTAATTAGGGCCTCTTTGA 59.749 40.000 10.74 0.55 0.00 2.69
96 97 6.069381 ACACTCTTAATTAGGGCCTCTTTGAT 60.069 38.462 10.74 0.00 0.00 2.57
97 98 6.830838 CACTCTTAATTAGGGCCTCTTTGATT 59.169 38.462 10.74 6.78 0.00 2.57
98 99 7.340487 CACTCTTAATTAGGGCCTCTTTGATTT 59.660 37.037 10.74 0.00 0.00 2.17
99 100 7.340487 ACTCTTAATTAGGGCCTCTTTGATTTG 59.660 37.037 10.74 0.00 0.00 2.32
101 102 2.897271 TAGGGCCTCTTTGATTTGCA 57.103 45.000 10.74 0.00 0.00 4.08
102 103 1.553706 AGGGCCTCTTTGATTTGCAG 58.446 50.000 0.00 0.00 0.00 4.41
103 104 0.533951 GGGCCTCTTTGATTTGCAGG 59.466 55.000 0.84 0.00 0.00 4.85
104 105 1.549203 GGCCTCTTTGATTTGCAGGA 58.451 50.000 0.00 0.00 0.00 3.86
105 106 2.105766 GGCCTCTTTGATTTGCAGGAT 58.894 47.619 0.00 0.00 0.00 3.24
108 109 3.629087 CCTCTTTGATTTGCAGGATCCT 58.371 45.455 9.02 9.02 0.00 3.24
109 110 4.785301 CCTCTTTGATTTGCAGGATCCTA 58.215 43.478 15.67 0.00 0.00 2.94
110 111 5.195940 CCTCTTTGATTTGCAGGATCCTAA 58.804 41.667 15.67 5.85 0.00 2.69
111 112 5.653769 CCTCTTTGATTTGCAGGATCCTAAA 59.346 40.000 15.67 13.09 0.00 1.85
112 113 6.153340 CCTCTTTGATTTGCAGGATCCTAAAA 59.847 38.462 15.67 17.85 0.00 1.52
113 114 7.309990 CCTCTTTGATTTGCAGGATCCTAAAAA 60.310 37.037 15.67 17.50 0.00 1.94
115 116 5.309323 TGATTTGCAGGATCCTAAAAACG 57.691 39.130 15.67 1.51 0.00 3.60
117 118 5.941058 TGATTTGCAGGATCCTAAAAACGTA 59.059 36.000 15.67 0.00 0.00 3.57
137 138 5.030874 GTAGGAACGAAAGAAACACATGG 57.969 43.478 0.00 0.00 0.00 3.66
139 140 4.710324 AGGAACGAAAGAAACACATGGTA 58.290 39.130 0.00 0.00 0.00 3.25
140 141 4.755123 AGGAACGAAAGAAACACATGGTAG 59.245 41.667 0.00 0.00 0.00 3.18
141 142 4.083484 GGAACGAAAGAAACACATGGTAGG 60.083 45.833 0.00 0.00 0.00 3.18
142 143 4.345859 ACGAAAGAAACACATGGTAGGA 57.654 40.909 0.00 0.00 0.00 2.94
143 144 4.906618 ACGAAAGAAACACATGGTAGGAT 58.093 39.130 0.00 0.00 0.00 3.24
145 146 6.106673 ACGAAAGAAACACATGGTAGGATAG 58.893 40.000 0.00 0.00 0.00 2.08
146 147 5.523916 CGAAAGAAACACATGGTAGGATAGG 59.476 44.000 0.00 0.00 0.00 2.57
150 151 4.982241 AACACATGGTAGGATAGGGATG 57.018 45.455 0.00 0.00 0.00 3.51
151 152 2.639839 ACACATGGTAGGATAGGGATGC 59.360 50.000 0.00 0.00 0.00 3.91
152 153 2.026822 CACATGGTAGGATAGGGATGCC 60.027 54.545 0.00 0.00 0.00 4.40
153 154 2.157942 ACATGGTAGGATAGGGATGCCT 60.158 50.000 11.82 11.82 35.82 4.75
156 157 1.187087 GTAGGATAGGGATGCCTCCG 58.813 60.000 10.00 0.00 43.11 4.63
157 158 0.614979 TAGGATAGGGATGCCTCCGC 60.615 60.000 10.00 0.00 43.11 5.54
176 177 4.497473 CGCAAGGTAGATGGTTGAAAAA 57.503 40.909 0.00 0.00 0.00 1.94
178 179 4.023193 CGCAAGGTAGATGGTTGAAAAACT 60.023 41.667 0.00 0.00 32.01 2.66
180 181 5.009610 GCAAGGTAGATGGTTGAAAAACTCA 59.990 40.000 0.00 0.00 32.01 3.41
181 182 6.294731 GCAAGGTAGATGGTTGAAAAACTCAT 60.295 38.462 0.00 0.00 32.01 2.90
182 183 7.094377 GCAAGGTAGATGGTTGAAAAACTCATA 60.094 37.037 0.00 0.00 32.01 2.15
183 184 8.792633 CAAGGTAGATGGTTGAAAAACTCATAA 58.207 33.333 0.00 0.00 32.01 1.90
184 185 9.533831 AAGGTAGATGGTTGAAAAACTCATAAT 57.466 29.630 0.00 0.00 32.01 1.28
185 186 9.533831 AGGTAGATGGTTGAAAAACTCATAATT 57.466 29.630 0.00 0.00 32.01 1.40
189 190 8.992073 AGATGGTTGAAAAACTCATAATTTTGC 58.008 29.630 0.00 0.00 32.01 3.68
190 191 8.674263 ATGGTTGAAAAACTCATAATTTTGCA 57.326 26.923 0.00 0.00 33.58 4.08
191 192 8.498054 TGGTTGAAAAACTCATAATTTTGCAA 57.502 26.923 0.00 0.00 40.64 4.08
192 193 8.610896 TGGTTGAAAAACTCATAATTTTGCAAG 58.389 29.630 0.00 0.00 42.55 4.01
193 194 8.479829 GTTGAAAAACTCATAATTTTGCAAGC 57.520 30.769 0.00 0.00 42.55 4.01
194 195 6.875753 TGAAAAACTCATAATTTTGCAAGCG 58.124 32.000 0.00 0.00 32.68 4.68
196 197 6.843069 AAAACTCATAATTTTGCAAGCGTT 57.157 29.167 0.00 0.00 0.00 4.84
197 198 5.827568 AACTCATAATTTTGCAAGCGTTG 57.172 34.783 0.00 0.00 0.00 4.10
198 199 5.119931 ACTCATAATTTTGCAAGCGTTGA 57.880 34.783 0.00 0.51 0.00 3.18
199 200 5.713025 ACTCATAATTTTGCAAGCGTTGAT 58.287 33.333 0.00 0.00 0.00 2.57
201 202 5.468592 TCATAATTTTGCAAGCGTTGATGT 58.531 33.333 0.00 0.00 0.00 3.06
202 203 5.925397 TCATAATTTTGCAAGCGTTGATGTT 59.075 32.000 0.00 0.00 0.00 2.71
227 2825 9.699410 TTTGATTCATAGGGATAGAAAACACAT 57.301 29.630 0.00 0.00 0.00 3.21
234 2832 9.573166 CATAGGGATAGAAAACACATAAATCCA 57.427 33.333 0.00 0.00 34.39 3.41
338 2936 4.406003 ACATAGAAATTACACGCTCCCTCT 59.594 41.667 0.00 0.00 0.00 3.69
341 2939 3.008049 AGAAATTACACGCTCCCTCTGTT 59.992 43.478 0.00 0.00 0.00 3.16
343 2941 0.606604 TTACACGCTCCCTCTGTTCC 59.393 55.000 0.00 0.00 0.00 3.62
350 2948 2.418197 CGCTCCCTCTGTTCCGAATTAA 60.418 50.000 0.00 0.00 0.00 1.40
353 2951 4.035675 GCTCCCTCTGTTCCGAATTAATTG 59.964 45.833 5.17 0.00 0.00 2.32
364 2962 9.549509 TGTTCCGAATTAATTGTTTTAGATTCG 57.450 29.630 5.17 8.76 43.04 3.34
375 2973 8.798748 ATTGTTTTAGATTCGTCTAGATACGG 57.201 34.615 0.00 0.00 43.05 4.02
378 2976 8.074370 TGTTTTAGATTCGTCTAGATACGGATG 58.926 37.037 2.64 0.00 41.14 3.51
394 2992 2.800544 CGGATGTATCGACACCCATTTC 59.199 50.000 0.00 0.00 39.65 2.17
397 2995 4.442893 GGATGTATCGACACCCATTTCAGA 60.443 45.833 0.00 0.00 39.43 3.27
398 2996 4.545208 TGTATCGACACCCATTTCAGAA 57.455 40.909 0.00 0.00 0.00 3.02
399 2997 4.503910 TGTATCGACACCCATTTCAGAAG 58.496 43.478 0.00 0.00 0.00 2.85
400 2998 3.703001 ATCGACACCCATTTCAGAAGT 57.297 42.857 0.00 0.00 0.00 3.01
401 2999 4.819105 ATCGACACCCATTTCAGAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
402 3000 4.819105 TCGACACCCATTTCAGAAGTAT 57.181 40.909 0.00 0.00 0.00 2.12
403 3001 5.160607 TCGACACCCATTTCAGAAGTATT 57.839 39.130 0.00 0.00 0.00 1.89
442 3040 9.429109 TGGTAGTCTACATATAAAATCTGGTCA 57.571 33.333 12.08 0.00 0.00 4.02
455 3053 7.775397 AAAATCTGGTCAATGTCAAACTTTG 57.225 32.000 0.00 0.00 35.37 2.77
456 3054 6.469782 AATCTGGTCAATGTCAAACTTTGT 57.530 33.333 1.44 0.00 35.51 2.83
457 3055 5.499139 TCTGGTCAATGTCAAACTTTGTC 57.501 39.130 1.44 0.00 35.51 3.18
458 3056 4.946772 TCTGGTCAATGTCAAACTTTGTCA 59.053 37.500 4.27 4.27 35.51 3.58
459 3057 5.417266 TCTGGTCAATGTCAAACTTTGTCAA 59.583 36.000 5.69 0.00 35.51 3.18
460 3058 5.406649 TGGTCAATGTCAAACTTTGTCAAC 58.593 37.500 5.69 1.10 35.51 3.18
461 3059 5.184864 TGGTCAATGTCAAACTTTGTCAACT 59.815 36.000 5.69 0.00 35.51 3.16
462 3060 6.099341 GGTCAATGTCAAACTTTGTCAACTT 58.901 36.000 5.69 0.00 35.51 2.66
463 3061 6.589907 GGTCAATGTCAAACTTTGTCAACTTT 59.410 34.615 5.69 0.00 35.51 2.66
464 3062 7.411804 GGTCAATGTCAAACTTTGTCAACTTTG 60.412 37.037 5.69 8.82 35.51 2.77
465 3063 7.328249 GTCAATGTCAAACTTTGTCAACTTTGA 59.672 33.333 11.26 11.26 35.51 2.69
565 3163 9.274065 GTTTTATATGCAGACTAAAAGGAAACG 57.726 33.333 9.75 0.00 0.00 3.60
566 3164 7.548196 TTATATGCAGACTAAAAGGAAACGG 57.452 36.000 0.00 0.00 0.00 4.44
567 3165 3.478857 TGCAGACTAAAAGGAAACGGA 57.521 42.857 0.00 0.00 0.00 4.69
568 3166 3.399330 TGCAGACTAAAAGGAAACGGAG 58.601 45.455 0.00 0.00 0.00 4.63
569 3167 2.742589 GCAGACTAAAAGGAAACGGAGG 59.257 50.000 0.00 0.00 0.00 4.30
570 3168 3.556423 GCAGACTAAAAGGAAACGGAGGA 60.556 47.826 0.00 0.00 0.00 3.71
574 3172 5.185442 AGACTAAAAGGAAACGGAGGAGTAG 59.815 44.000 0.00 0.00 0.00 2.57
589 3187 7.118825 ACGGAGGAGTAGTAAAGTAAAATTTGC 59.881 37.037 0.00 0.00 0.00 3.68
621 3219 8.885494 TTTCCTTTTCATACTCCATTGTTTTG 57.115 30.769 0.00 0.00 0.00 2.44
627 3225 4.457603 TCATACTCCATTGTTTTGAACCCG 59.542 41.667 0.00 0.00 0.00 5.28
630 3228 1.133450 TCCATTGTTTTGAACCCGGGA 60.133 47.619 32.02 0.04 0.00 5.14
631 3229 1.689273 CCATTGTTTTGAACCCGGGAA 59.311 47.619 32.02 8.62 0.00 3.97
632 3230 2.103263 CCATTGTTTTGAACCCGGGAAA 59.897 45.455 32.02 15.38 0.00 3.13
633 3231 3.389221 CATTGTTTTGAACCCGGGAAAG 58.611 45.455 32.02 0.52 0.00 2.62
634 3232 1.404843 TGTTTTGAACCCGGGAAAGG 58.595 50.000 32.02 0.00 0.00 3.11
637 3235 2.209690 TTTGAACCCGGGAAAGGATC 57.790 50.000 32.02 14.99 0.00 3.36
698 3611 1.148498 GAGGCCTTATCAACCCCCG 59.852 63.158 6.77 0.00 0.00 5.73
699 3612 2.518587 GGCCTTATCAACCCCCGC 60.519 66.667 0.00 0.00 0.00 6.13
717 3630 2.036098 TCCGGTGGCGGTAGAGAA 59.964 61.111 0.00 0.00 0.00 2.87
769 3682 4.954970 CGGGGCAACACACTGGCT 62.955 66.667 0.00 0.00 44.36 4.75
773 3686 3.297620 GCAACACACTGGCTGGGG 61.298 66.667 0.00 0.00 0.00 4.96
774 3687 2.598394 CAACACACTGGCTGGGGG 60.598 66.667 0.00 0.00 0.00 5.40
775 3688 2.776526 AACACACTGGCTGGGGGA 60.777 61.111 1.72 0.00 0.00 4.81
776 3689 2.391130 AACACACTGGCTGGGGGAA 61.391 57.895 1.72 0.00 0.00 3.97
791 3704 2.106683 GGAACGGCATCCCACTTCG 61.107 63.158 0.00 0.00 33.05 3.79
829 3750 3.532155 CCCGCTTCCCCTCTCTCG 61.532 72.222 0.00 0.00 0.00 4.04
830 3751 3.532155 CCGCTTCCCCTCTCTCGG 61.532 72.222 0.00 0.00 0.00 4.63
831 3752 4.214327 CGCTTCCCCTCTCTCGGC 62.214 72.222 0.00 0.00 0.00 5.54
832 3753 3.855853 GCTTCCCCTCTCTCGGCC 61.856 72.222 0.00 0.00 0.00 6.13
833 3754 2.042435 CTTCCCCTCTCTCGGCCT 60.042 66.667 0.00 0.00 0.00 5.19
834 3755 2.042843 TTCCCCTCTCTCGGCCTC 60.043 66.667 0.00 0.00 0.00 4.70
835 3756 2.581726 CTTCCCCTCTCTCGGCCTCT 62.582 65.000 0.00 0.00 0.00 3.69
836 3757 2.520741 CCCCTCTCTCGGCCTCTC 60.521 72.222 0.00 0.00 0.00 3.20
928 3853 2.368875 TCCAACACCTTCCTTCTCTCAC 59.631 50.000 0.00 0.00 0.00 3.51
929 3854 2.104792 CCAACACCTTCCTTCTCTCACA 59.895 50.000 0.00 0.00 0.00 3.58
930 3855 3.397482 CAACACCTTCCTTCTCTCACAG 58.603 50.000 0.00 0.00 0.00 3.66
933 3858 1.274712 CCTTCCTTCTCTCACAGCCT 58.725 55.000 0.00 0.00 0.00 4.58
934 3859 1.206849 CCTTCCTTCTCTCACAGCCTC 59.793 57.143 0.00 0.00 0.00 4.70
936 3861 0.616111 TCCTTCTCTCACAGCCTCCC 60.616 60.000 0.00 0.00 0.00 4.30
938 3863 0.967887 CTTCTCTCACAGCCTCCCGA 60.968 60.000 0.00 0.00 0.00 5.14
939 3864 0.967887 TTCTCTCACAGCCTCCCGAG 60.968 60.000 0.00 0.00 0.00 4.63
940 3865 3.071206 TCTCACAGCCTCCCGAGC 61.071 66.667 0.00 0.00 0.00 5.03
941 3866 3.073735 CTCACAGCCTCCCGAGCT 61.074 66.667 0.00 0.00 42.70 4.09
942 3867 2.604686 TCACAGCCTCCCGAGCTT 60.605 61.111 0.00 0.00 38.95 3.74
943 3868 2.125350 CACAGCCTCCCGAGCTTC 60.125 66.667 0.00 0.00 38.95 3.86
944 3869 3.394836 ACAGCCTCCCGAGCTTCC 61.395 66.667 0.00 0.00 38.95 3.46
945 3870 4.521062 CAGCCTCCCGAGCTTCCG 62.521 72.222 0.00 0.00 38.95 4.30
970 3895 1.779025 CGCATTCCAATCCGCCTCTG 61.779 60.000 0.00 0.00 0.00 3.35
1022 3948 4.083862 GAGGAAGAAGGGCGCCGT 62.084 66.667 22.54 20.09 0.00 5.68
1213 4162 1.375523 GTTCCGGATCTGCAACCGT 60.376 57.895 19.87 0.00 46.53 4.83
1214 4163 1.079405 TTCCGGATCTGCAACCGTC 60.079 57.895 19.87 3.15 46.53 4.79
1215 4164 2.511600 CCGGATCTGCAACCGTCC 60.512 66.667 19.87 9.97 46.53 4.79
1216 4165 2.511600 CGGATCTGCAACCGTCCC 60.512 66.667 15.42 0.00 43.53 4.46
1236 4186 2.432628 CCGCGGGTCACTCTGTTC 60.433 66.667 20.10 0.00 0.00 3.18
1237 4187 2.651361 CGCGGGTCACTCTGTTCT 59.349 61.111 0.00 0.00 0.00 3.01
1414 4382 8.525290 AATTTATGGATTTCTTCACGGATTCT 57.475 30.769 0.00 0.00 0.00 2.40
1419 4387 4.150804 GGATTTCTTCACGGATTCTATCGC 59.849 45.833 0.00 0.00 0.00 4.58
1424 4392 2.298610 TCACGGATTCTATCGCTCAGT 58.701 47.619 0.00 0.00 0.00 3.41
1441 4432 3.017442 TCAGTATCTCCGTCTTGGTCTG 58.983 50.000 0.00 0.00 39.52 3.51
1443 4434 3.018149 AGTATCTCCGTCTTGGTCTGAC 58.982 50.000 0.00 0.00 39.52 3.51
1572 4564 0.036875 AGCTTCTGCAGGTTACACCC 59.963 55.000 15.13 0.00 42.74 4.61
1573 4565 0.250727 GCTTCTGCAGGTTACACCCA 60.251 55.000 15.13 0.00 39.75 4.51
1574 4566 1.523758 CTTCTGCAGGTTACACCCAC 58.476 55.000 15.13 0.00 39.75 4.61
1575 4567 0.109723 TTCTGCAGGTTACACCCACC 59.890 55.000 15.13 0.00 39.75 4.61
1597 4589 2.033141 AGCCAAGCTGATGCACGT 59.967 55.556 0.00 0.00 42.74 4.49
1602 4594 2.415893 GCCAAGCTGATGCACGTTTATT 60.416 45.455 0.00 0.00 42.74 1.40
1616 4611 6.017440 TGCACGTTTATTATGGGATTTCTAGC 60.017 38.462 0.00 0.00 0.00 3.42
1617 4612 6.204882 GCACGTTTATTATGGGATTTCTAGCT 59.795 38.462 0.00 0.00 0.00 3.32
1618 4613 7.255139 GCACGTTTATTATGGGATTTCTAGCTT 60.255 37.037 0.00 0.00 0.00 3.74
1677 4681 3.977326 ACAGAAAGAAGAAAGGGGAGACT 59.023 43.478 0.00 0.00 0.00 3.24
1722 4727 2.925170 AAGGCGACAGGGCACTCT 60.925 61.111 0.00 0.00 45.36 3.24
1809 4814 1.281899 CCGCGAAGATCAAGAAGGTC 58.718 55.000 8.23 0.00 0.00 3.85
1837 4842 6.377327 TCTTTGTTTGGTGATTCTCTGTTC 57.623 37.500 0.00 0.00 0.00 3.18
1842 4847 6.533730 TGTTTGGTGATTCTCTGTTCTACAT 58.466 36.000 0.00 0.00 0.00 2.29
1945 5929 4.454678 TGATGCTGATGGAATAGTGGTTC 58.545 43.478 0.00 0.00 0.00 3.62
1950 5934 3.620488 TGATGGAATAGTGGTTCAAGGC 58.380 45.455 0.00 0.00 0.00 4.35
2020 6004 0.801251 CAAGAAGCTGAAGAAGGGCG 59.199 55.000 0.00 0.00 0.00 6.13
2057 6339 3.316308 ACTGATGTGCTCAAGACCAAAAC 59.684 43.478 0.00 0.00 32.14 2.43
2191 6473 6.546034 GGTACTCATGGCAACCAAGTAATATT 59.454 38.462 0.42 0.00 36.95 1.28
2196 6478 8.938801 TCATGGCAACCAAGTAATATTGATAT 57.061 30.769 0.00 0.00 36.95 1.63
2245 6578 8.690840 GTCTGTTGTTTGTATTGCATTACTTTC 58.309 33.333 17.19 9.28 0.00 2.62
2246 6579 8.409371 TCTGTTGTTTGTATTGCATTACTTTCA 58.591 29.630 17.19 11.15 0.00 2.69
2247 6580 9.195411 CTGTTGTTTGTATTGCATTACTTTCAT 57.805 29.630 17.19 0.00 0.00 2.57
2248 6581 8.976471 TGTTGTTTGTATTGCATTACTTTCATG 58.024 29.630 17.19 0.00 0.00 3.07
2249 6582 7.579589 TGTTTGTATTGCATTACTTTCATGC 57.420 32.000 17.19 0.00 46.25 4.06
2296 7350 3.069300 TGTTTCCATGGTTCCACATGTTG 59.931 43.478 12.58 0.00 45.21 3.33
2300 7355 2.428171 CCATGGTTCCACATGTTGATCC 59.572 50.000 16.58 16.58 45.21 3.36
2311 7366 4.154737 CACATGTTGATCCGTCATCTTGTT 59.845 41.667 0.00 0.00 38.95 2.83
2313 7368 5.241506 ACATGTTGATCCGTCATCTTGTTTT 59.758 36.000 0.00 0.00 38.36 2.43
2324 7379 6.324819 CGTCATCTTGTTTTTGCTGGAATAT 58.675 36.000 0.00 0.00 0.00 1.28
2325 7380 7.415095 CCGTCATCTTGTTTTTGCTGGAATATA 60.415 37.037 0.00 0.00 0.00 0.86
2326 7381 7.429340 CGTCATCTTGTTTTTGCTGGAATATAC 59.571 37.037 0.00 0.00 0.00 1.47
2327 7382 8.462016 GTCATCTTGTTTTTGCTGGAATATACT 58.538 33.333 0.00 0.00 0.00 2.12
2328 7383 8.461222 TCATCTTGTTTTTGCTGGAATATACTG 58.539 33.333 0.00 0.00 0.00 2.74
2331 7386 8.726988 TCTTGTTTTTGCTGGAATATACTGTAC 58.273 33.333 0.00 0.00 0.00 2.90
2421 7477 4.998788 ACAGCCTGAAAAAGTTCTTCAAC 58.001 39.130 0.00 0.00 32.57 3.18
2496 7552 9.208022 CTGATCTTCACATTAGTTTGTTGTCTA 57.792 33.333 0.00 0.00 0.00 2.59
2499 7555 8.547967 TCTTCACATTAGTTTGTTGTCTATCC 57.452 34.615 0.00 0.00 0.00 2.59
2657 7714 3.529533 CTTGGATAACTGAGACTGGCAG 58.470 50.000 14.16 14.16 39.26 4.85
2665 7722 8.317679 GGATAACTGAGACTGGCAGATATATTT 58.682 37.037 23.66 9.59 33.30 1.40
3001 8060 4.794329 GCTCAGGCAACCTCTTTTCTTTTC 60.794 45.833 0.00 0.00 38.54 2.29
3037 8102 6.937436 AGTTTTGGAGTACTAAACAACAGG 57.063 37.500 17.73 0.00 34.93 4.00
3201 8266 7.254590 GCAGTAGATGGTCTGAACATTATGAAC 60.255 40.741 9.96 4.55 34.02 3.18
3257 8322 7.138736 TGTTTTAGCTTTCTGCACTTCATTAC 58.861 34.615 0.00 0.00 45.94 1.89
3289 8357 6.707161 ACATGCTTGATGTTTTGCAGTTTTAT 59.293 30.769 6.60 0.00 43.20 1.40
3292 8444 8.654230 TGCTTGATGTTTTGCAGTTTTATTAA 57.346 26.923 0.00 0.00 0.00 1.40
3752 8922 4.862018 GTGGCGATATTAGATGAGAAGCTC 59.138 45.833 0.00 0.00 0.00 4.09
3854 9024 2.423185 CTCAATAATGCGCCAAGGTTCA 59.577 45.455 4.18 0.00 0.00 3.18
3857 9027 1.388547 TAATGCGCCAAGGTTCATCC 58.611 50.000 4.18 0.00 0.00 3.51
3882 9052 7.321271 CCGAAGTTATTATGCAATAAGCTTTCG 59.679 37.037 3.20 16.24 42.97 3.46
3918 9088 9.976511 TGTATATTTATGCAGTTAGTGACTACC 57.023 33.333 0.00 0.00 36.65 3.18
3981 9151 6.321181 ACAATGACAAGTGGTTTATGTTCACT 59.679 34.615 0.00 0.00 42.77 3.41
4040 9210 6.467339 GCCCCAAGGTAAGGAGTTTATCATAT 60.467 42.308 0.00 0.00 34.57 1.78
4041 9211 7.256908 GCCCCAAGGTAAGGAGTTTATCATATA 60.257 40.741 0.00 0.00 34.57 0.86
4042 9212 8.101419 CCCCAAGGTAAGGAGTTTATCATATAC 58.899 40.741 0.00 0.00 0.00 1.47
4043 9213 8.881262 CCCAAGGTAAGGAGTTTATCATATACT 58.119 37.037 0.00 0.00 0.00 2.12
4044 9214 9.930693 CCAAGGTAAGGAGTTTATCATATACTC 57.069 37.037 6.71 6.71 36.44 2.59
4051 9221 7.784470 GGAGTTTATCATATACTCCCTCTGT 57.216 40.000 19.01 0.00 45.52 3.41
4052 9222 8.880991 GGAGTTTATCATATACTCCCTCTGTA 57.119 38.462 19.01 0.00 45.52 2.74
4053 9223 9.310449 GGAGTTTATCATATACTCCCTCTGTAA 57.690 37.037 19.01 0.00 45.52 2.41
4067 9237 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
4068 9238 8.319057 TCCCTCTGTAAAGAAATATAAGAGCA 57.681 34.615 0.00 0.00 0.00 4.26
4069 9239 8.938883 TCCCTCTGTAAAGAAATATAAGAGCAT 58.061 33.333 0.00 0.00 0.00 3.79
4070 9240 9.566432 CCCTCTGTAAAGAAATATAAGAGCATT 57.434 33.333 0.00 0.00 0.00 3.56
4138 9413 8.012957 ACAGAGGGAGTAGTATTTAGATGTTG 57.987 38.462 0.00 0.00 0.00 3.33
4264 9541 7.416964 TTTGGCAACTTGGCTAACAATATAT 57.583 32.000 15.73 0.00 44.10 0.86
4324 9606 7.966812 TGATCTCCATGCACTAGTATGTTTAT 58.033 34.615 0.00 0.00 36.27 1.40
4326 9608 6.759272 TCTCCATGCACTAGTATGTTTATCC 58.241 40.000 0.00 0.00 36.27 2.59
4331 9613 5.113383 TGCACTAGTATGTTTATCCGTTGG 58.887 41.667 0.00 0.00 0.00 3.77
4342 9624 6.408035 TGTTTATCCGTTGGCATCTAACTTA 58.592 36.000 0.00 0.00 0.00 2.24
4436 9718 7.396540 ACTGATCTTGAACTTTTGTTTCAGT 57.603 32.000 7.13 7.13 44.24 3.41
4475 9757 8.706492 TTATTTAATCCTTTTGCTGCTCATTG 57.294 30.769 0.00 0.00 0.00 2.82
4544 9826 7.164803 TGAAGTGTGTTATGTACCATCATCAA 58.835 34.615 0.00 0.00 0.00 2.57
4723 10008 8.565896 TCATATGTTGCAACTTAAGAGTGATT 57.434 30.769 28.61 7.92 35.91 2.57
4805 10090 0.976073 AGGTGGTGGTATGCTAGCGT 60.976 55.000 15.08 15.08 0.00 5.07
4833 10120 1.154413 GCGTGTGATCCAAGTTGCG 60.154 57.895 0.00 0.00 0.00 4.85
4860 10147 3.025262 ACAACTTTTTGCGGTAGGGAAA 58.975 40.909 0.00 0.00 36.00 3.13
4914 10201 3.187022 TGAAGATGCAGTCACAACATTCG 59.813 43.478 0.00 0.00 0.00 3.34
4977 10264 4.570369 GGTTTTTGTGAACCATGGACAAAG 59.430 41.667 21.47 0.00 46.66 2.77
5004 10291 7.164230 TGGTTTGAATGTTGTGAACTAACTT 57.836 32.000 0.00 0.00 0.00 2.66
5008 10295 5.441500 TGAATGTTGTGAACTAACTTGGGA 58.558 37.500 0.00 0.00 0.00 4.37
5009 10296 5.530915 TGAATGTTGTGAACTAACTTGGGAG 59.469 40.000 0.00 0.00 0.00 4.30
5012 10299 4.204799 GTTGTGAACTAACTTGGGAGGTT 58.795 43.478 0.00 0.00 0.00 3.50
5032 10319 4.037923 GGTTTGAATGTTGTCACATGGTCT 59.962 41.667 0.00 0.00 43.34 3.85
5034 10321 3.066380 TGAATGTTGTCACATGGTCTCG 58.934 45.455 0.00 0.00 43.34 4.04
5035 10322 1.442769 ATGTTGTCACATGGTCTCGC 58.557 50.000 0.00 0.00 42.46 5.03
5036 10323 0.392706 TGTTGTCACATGGTCTCGCT 59.607 50.000 0.00 0.00 0.00 4.93
5038 10325 2.036604 TGTTGTCACATGGTCTCGCTTA 59.963 45.455 0.00 0.00 0.00 3.09
5039 10326 3.262420 GTTGTCACATGGTCTCGCTTAT 58.738 45.455 0.00 0.00 0.00 1.73
5040 10327 2.892374 TGTCACATGGTCTCGCTTATG 58.108 47.619 0.00 0.00 0.00 1.90
5041 10328 2.233676 TGTCACATGGTCTCGCTTATGT 59.766 45.455 0.00 0.00 34.31 2.29
5046 10333 2.851263 TGGTCTCGCTTATGTTGGTT 57.149 45.000 0.00 0.00 0.00 3.67
5078 10365 7.503566 ACCAATTGTTCTGTAGCTTGCATATAT 59.496 33.333 4.43 0.00 0.00 0.86
5079 10366 9.002600 CCAATTGTTCTGTAGCTTGCATATATA 57.997 33.333 4.43 0.00 0.00 0.86
5081 10368 7.658179 TTGTTCTGTAGCTTGCATATATAGC 57.342 36.000 0.00 0.00 35.16 2.97
5082 10369 6.758254 TGTTCTGTAGCTTGCATATATAGCA 58.242 36.000 9.84 7.11 40.85 3.49
5097 10384 9.565213 GCATATATAGCAAGAAATCCAATTCAC 57.435 33.333 0.00 0.00 0.00 3.18
5105 10392 6.096001 GCAAGAAATCCAATTCACCTGTATCT 59.904 38.462 0.00 0.00 0.00 1.98
5157 10446 3.017442 GGATTCCTCCACTTAAGTTGCC 58.983 50.000 5.07 0.00 41.64 4.52
5161 10450 2.708861 TCCTCCACTTAAGTTGCCTGAA 59.291 45.455 5.07 0.00 0.00 3.02
5164 10453 4.156739 CCTCCACTTAAGTTGCCTGAATTC 59.843 45.833 5.07 0.00 0.00 2.17
5165 10454 3.751175 TCCACTTAAGTTGCCTGAATTCG 59.249 43.478 5.07 0.00 0.00 3.34
5166 10455 3.119849 CCACTTAAGTTGCCTGAATTCGG 60.120 47.826 5.07 7.35 0.00 4.30
5176 10465 2.350522 CCTGAATTCGGTCTTCACCTG 58.649 52.381 13.23 0.00 41.17 4.00
5180 10469 3.007506 TGAATTCGGTCTTCACCTGCTTA 59.992 43.478 0.04 0.00 41.17 3.09
5184 10473 2.094182 TCGGTCTTCACCTGCTTATGTC 60.094 50.000 0.00 0.00 41.17 3.06
5188 10477 2.028112 TCTTCACCTGCTTATGTCGCTT 60.028 45.455 0.00 0.00 0.00 4.68
5189 10478 2.472695 TCACCTGCTTATGTCGCTTT 57.527 45.000 0.00 0.00 0.00 3.51
5193 10482 3.058293 CACCTGCTTATGTCGCTTTTTCA 60.058 43.478 0.00 0.00 0.00 2.69
5195 10484 4.218417 ACCTGCTTATGTCGCTTTTTCATT 59.782 37.500 0.00 0.00 0.00 2.57
5198 10487 6.183360 CCTGCTTATGTCGCTTTTTCATTCTA 60.183 38.462 0.00 0.00 0.00 2.10
5199 10488 7.320443 TGCTTATGTCGCTTTTTCATTCTAT 57.680 32.000 0.00 0.00 0.00 1.98
5202 10491 7.624360 TTATGTCGCTTTTTCATTCTATGGT 57.376 32.000 0.00 0.00 0.00 3.55
5207 10496 5.647658 TCGCTTTTTCATTCTATGGTGATGT 59.352 36.000 0.00 0.00 0.00 3.06
5210 10499 6.914757 GCTTTTTCATTCTATGGTGATGTAGC 59.085 38.462 0.00 0.00 0.00 3.58
5224 10513 4.342378 GTGATGTAGCTTCAGACCCATCTA 59.658 45.833 0.00 0.00 32.25 1.98
5229 10518 5.663106 TGTAGCTTCAGACCCATCTAGAAAT 59.337 40.000 0.00 0.00 32.25 2.17
5267 10556 2.353030 GTTTGTGGTTGGTCGCGC 60.353 61.111 0.00 0.00 0.00 6.86
5269 10558 2.539338 TTTGTGGTTGGTCGCGCTC 61.539 57.895 5.56 0.00 0.00 5.03
5275 10564 4.415332 TTGGTCGCGCTCGGTCTC 62.415 66.667 5.56 0.00 36.13 3.36
5281 10570 4.057428 GCGCTCGGTCTCACCACT 62.057 66.667 0.00 0.00 38.47 4.00
5282 10571 2.179517 CGCTCGGTCTCACCACTC 59.820 66.667 0.00 0.00 38.47 3.51
5283 10572 2.179517 GCTCGGTCTCACCACTCG 59.820 66.667 0.00 0.00 38.47 4.18
5284 10573 2.333417 GCTCGGTCTCACCACTCGA 61.333 63.158 0.00 0.00 38.47 4.04
5285 10574 1.658686 GCTCGGTCTCACCACTCGAT 61.659 60.000 0.00 0.00 38.47 3.59
5286 10575 0.811915 CTCGGTCTCACCACTCGATT 59.188 55.000 0.00 0.00 38.47 3.34
5287 10576 0.809385 TCGGTCTCACCACTCGATTC 59.191 55.000 0.00 0.00 38.47 2.52
5288 10577 0.526211 CGGTCTCACCACTCGATTCA 59.474 55.000 0.00 0.00 38.47 2.57
5289 10578 1.067846 CGGTCTCACCACTCGATTCAA 60.068 52.381 0.00 0.00 38.47 2.69
5290 10579 2.609491 CGGTCTCACCACTCGATTCAAA 60.609 50.000 0.00 0.00 38.47 2.69
5291 10580 2.737252 GGTCTCACCACTCGATTCAAAC 59.263 50.000 0.00 0.00 38.42 2.93
5292 10581 3.555168 GGTCTCACCACTCGATTCAAACT 60.555 47.826 0.00 0.00 38.42 2.66
5293 10582 4.058817 GTCTCACCACTCGATTCAAACTT 58.941 43.478 0.00 0.00 0.00 2.66
5294 10583 5.227908 GTCTCACCACTCGATTCAAACTTA 58.772 41.667 0.00 0.00 0.00 2.24
5295 10584 5.694910 GTCTCACCACTCGATTCAAACTTAA 59.305 40.000 0.00 0.00 0.00 1.85
5296 10585 5.694910 TCTCACCACTCGATTCAAACTTAAC 59.305 40.000 0.00 0.00 0.00 2.01
5297 10586 4.446385 TCACCACTCGATTCAAACTTAACG 59.554 41.667 0.00 0.00 0.00 3.18
5298 10587 3.744426 ACCACTCGATTCAAACTTAACGG 59.256 43.478 0.00 0.00 0.00 4.44
5299 10588 3.991773 CCACTCGATTCAAACTTAACGGA 59.008 43.478 0.00 0.00 0.00 4.69
5300 10589 4.449743 CCACTCGATTCAAACTTAACGGAA 59.550 41.667 0.00 0.00 0.00 4.30
5301 10590 5.371629 CACTCGATTCAAACTTAACGGAAC 58.628 41.667 0.00 0.00 0.00 3.62
5302 10591 5.176958 CACTCGATTCAAACTTAACGGAACT 59.823 40.000 0.00 0.00 0.00 3.01
5303 10592 5.176958 ACTCGATTCAAACTTAACGGAACTG 59.823 40.000 0.00 0.00 0.00 3.16
5304 10593 5.051816 TCGATTCAAACTTAACGGAACTGT 58.948 37.500 0.00 0.00 0.00 3.55
5305 10594 6.215121 TCGATTCAAACTTAACGGAACTGTA 58.785 36.000 0.00 0.00 0.00 2.74
5306 10595 6.869913 TCGATTCAAACTTAACGGAACTGTAT 59.130 34.615 0.00 0.00 0.00 2.29
5307 10596 8.028354 TCGATTCAAACTTAACGGAACTGTATA 58.972 33.333 0.00 0.00 0.00 1.47
5308 10597 8.106348 CGATTCAAACTTAACGGAACTGTATAC 58.894 37.037 0.00 0.00 0.00 1.47
5309 10598 9.148104 GATTCAAACTTAACGGAACTGTATACT 57.852 33.333 4.17 0.00 0.00 2.12
5310 10599 8.891671 TTCAAACTTAACGGAACTGTATACTT 57.108 30.769 4.17 0.00 0.00 2.24
5311 10600 8.301730 TCAAACTTAACGGAACTGTATACTTG 57.698 34.615 4.17 0.00 0.00 3.16
5312 10601 8.143193 TCAAACTTAACGGAACTGTATACTTGA 58.857 33.333 4.17 0.00 0.00 3.02
5313 10602 8.433126 CAAACTTAACGGAACTGTATACTTGAG 58.567 37.037 4.17 0.00 0.00 3.02
5314 10603 6.098017 ACTTAACGGAACTGTATACTTGAGC 58.902 40.000 4.17 0.00 0.00 4.26
5315 10604 4.530710 AACGGAACTGTATACTTGAGCA 57.469 40.909 4.17 0.00 0.00 4.26
5316 10605 3.846360 ACGGAACTGTATACTTGAGCAC 58.154 45.455 4.17 0.00 0.00 4.40
5317 10606 3.257375 ACGGAACTGTATACTTGAGCACA 59.743 43.478 4.17 0.00 0.00 4.57
5318 10607 4.242475 CGGAACTGTATACTTGAGCACAA 58.758 43.478 4.17 0.00 34.65 3.33
5319 10608 4.688879 CGGAACTGTATACTTGAGCACAAA 59.311 41.667 4.17 0.00 35.49 2.83
5320 10609 5.389516 CGGAACTGTATACTTGAGCACAAAC 60.390 44.000 4.17 0.00 35.49 2.93
5321 10610 5.106673 GGAACTGTATACTTGAGCACAAACC 60.107 44.000 4.17 0.00 35.49 3.27
5322 10611 4.968259 ACTGTATACTTGAGCACAAACCA 58.032 39.130 4.17 0.00 35.49 3.67
5323 10612 4.997395 ACTGTATACTTGAGCACAAACCAG 59.003 41.667 4.17 3.00 35.49 4.00
5324 10613 4.968259 TGTATACTTGAGCACAAACCAGT 58.032 39.130 4.17 0.00 35.49 4.00
5325 10614 6.104146 TGTATACTTGAGCACAAACCAGTA 57.896 37.500 4.17 0.00 35.49 2.74
5326 10615 5.929992 TGTATACTTGAGCACAAACCAGTAC 59.070 40.000 4.17 0.00 35.49 2.73
5327 10616 3.275617 ACTTGAGCACAAACCAGTACA 57.724 42.857 0.00 0.00 35.49 2.90
5328 10617 3.616219 ACTTGAGCACAAACCAGTACAA 58.384 40.909 0.00 0.00 35.49 2.41
5329 10618 4.207165 ACTTGAGCACAAACCAGTACAAT 58.793 39.130 0.00 0.00 35.49 2.71
5330 10619 4.275936 ACTTGAGCACAAACCAGTACAATC 59.724 41.667 0.00 0.00 35.49 2.67
5331 10620 3.146066 TGAGCACAAACCAGTACAATCC 58.854 45.455 0.00 0.00 0.00 3.01
5332 10621 2.488153 GAGCACAAACCAGTACAATCCC 59.512 50.000 0.00 0.00 0.00 3.85
5333 10622 1.199097 GCACAAACCAGTACAATCCCG 59.801 52.381 0.00 0.00 0.00 5.14
5334 10623 1.199097 CACAAACCAGTACAATCCCGC 59.801 52.381 0.00 0.00 0.00 6.13
5335 10624 1.202830 ACAAACCAGTACAATCCCGCA 60.203 47.619 0.00 0.00 0.00 5.69
5336 10625 1.199097 CAAACCAGTACAATCCCGCAC 59.801 52.381 0.00 0.00 0.00 5.34
5337 10626 0.398696 AACCAGTACAATCCCGCACA 59.601 50.000 0.00 0.00 0.00 4.57
5338 10627 0.398696 ACCAGTACAATCCCGCACAA 59.601 50.000 0.00 0.00 0.00 3.33
5339 10628 0.802494 CCAGTACAATCCCGCACAAC 59.198 55.000 0.00 0.00 0.00 3.32
5340 10629 1.610624 CCAGTACAATCCCGCACAACT 60.611 52.381 0.00 0.00 0.00 3.16
5341 10630 1.464608 CAGTACAATCCCGCACAACTG 59.535 52.381 0.00 0.00 0.00 3.16
5342 10631 0.168128 GTACAATCCCGCACAACTGC 59.832 55.000 0.00 0.00 40.38 4.40
5343 10632 0.958382 TACAATCCCGCACAACTGCC 60.958 55.000 0.00 0.00 40.73 4.85
5344 10633 1.973281 CAATCCCGCACAACTGCCT 60.973 57.895 0.00 0.00 40.73 4.75
5345 10634 0.676466 CAATCCCGCACAACTGCCTA 60.676 55.000 0.00 0.00 40.73 3.93
5346 10635 0.392998 AATCCCGCACAACTGCCTAG 60.393 55.000 0.00 0.00 40.73 3.02
5347 10636 2.257409 ATCCCGCACAACTGCCTAGG 62.257 60.000 3.67 3.67 40.73 3.02
5348 10637 2.436646 CCGCACAACTGCCTAGGG 60.437 66.667 11.72 0.00 40.73 3.53
5349 10638 2.347490 CGCACAACTGCCTAGGGT 59.653 61.111 11.72 0.00 40.73 4.34
5350 10639 1.594833 CGCACAACTGCCTAGGGTA 59.405 57.895 11.72 0.00 40.73 3.69
5351 10640 0.460284 CGCACAACTGCCTAGGGTAG 60.460 60.000 11.72 2.90 40.73 3.18
5352 10641 0.744771 GCACAACTGCCTAGGGTAGC 60.745 60.000 11.72 3.07 39.03 3.58
5353 10642 0.107654 CACAACTGCCTAGGGTAGCC 60.108 60.000 11.72 1.60 39.03 3.93
5354 10643 1.272554 ACAACTGCCTAGGGTAGCCC 61.273 60.000 11.72 0.00 45.90 5.19
5363 10652 2.035626 GGGTAGCCCTGCTTTGCA 59.964 61.111 0.00 0.00 41.34 4.08
5364 10653 1.606313 GGGTAGCCCTGCTTTGCAA 60.606 57.895 0.00 0.00 41.34 4.08
5365 10654 0.972471 GGGTAGCCCTGCTTTGCAAT 60.972 55.000 0.00 0.00 41.34 3.56
5366 10655 1.684869 GGGTAGCCCTGCTTTGCAATA 60.685 52.381 0.00 0.00 41.34 1.90
5367 10656 1.678101 GGTAGCCCTGCTTTGCAATAG 59.322 52.381 0.00 2.01 40.44 1.73
5368 10657 2.369394 GTAGCCCTGCTTTGCAATAGT 58.631 47.619 0.00 0.00 40.44 2.12
5369 10658 2.806945 AGCCCTGCTTTGCAATAGTA 57.193 45.000 0.00 0.00 38.41 1.82
5370 10659 3.303351 AGCCCTGCTTTGCAATAGTAT 57.697 42.857 0.00 0.00 38.41 2.12
5371 10660 3.217626 AGCCCTGCTTTGCAATAGTATC 58.782 45.455 0.00 0.00 38.41 2.24
5372 10661 3.117738 AGCCCTGCTTTGCAATAGTATCT 60.118 43.478 0.00 0.00 38.41 1.98
5373 10662 4.103153 AGCCCTGCTTTGCAATAGTATCTA 59.897 41.667 0.00 0.00 38.41 1.98
5374 10663 4.453819 GCCCTGCTTTGCAATAGTATCTAG 59.546 45.833 0.00 0.00 38.41 2.43
5375 10664 5.615289 CCCTGCTTTGCAATAGTATCTAGT 58.385 41.667 0.00 0.00 38.41 2.57
5376 10665 6.741521 GCCCTGCTTTGCAATAGTATCTAGTA 60.742 42.308 0.00 0.00 38.41 1.82
5377 10666 7.217200 CCCTGCTTTGCAATAGTATCTAGTAA 58.783 38.462 0.00 0.00 38.41 2.24
5378 10667 7.171678 CCCTGCTTTGCAATAGTATCTAGTAAC 59.828 40.741 0.00 0.00 38.41 2.50
5379 10668 7.928706 CCTGCTTTGCAATAGTATCTAGTAACT 59.071 37.037 0.00 5.33 38.41 2.24
5380 10669 9.319143 CTGCTTTGCAATAGTATCTAGTAACTT 57.681 33.333 0.00 0.00 38.41 2.66
5381 10670 9.314321 TGCTTTGCAATAGTATCTAGTAACTTC 57.686 33.333 0.00 0.00 34.76 3.01
5382 10671 9.314321 GCTTTGCAATAGTATCTAGTAACTTCA 57.686 33.333 0.00 0.00 0.00 3.02
5402 10691 9.965902 AACTTCATAAACCAGAATCTTAGATGT 57.034 29.630 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 5.948758 TGATTTCCCATAGCACAAACACATA 59.051 36.000 0.00 0.00 0.00 2.29
3 4 4.771577 TGATTTCCCATAGCACAAACACAT 59.228 37.500 0.00 0.00 0.00 3.21
4 5 4.148079 TGATTTCCCATAGCACAAACACA 58.852 39.130 0.00 0.00 0.00 3.72
5 6 4.782019 TGATTTCCCATAGCACAAACAC 57.218 40.909 0.00 0.00 0.00 3.32
7 8 7.491682 ACAATATGATTTCCCATAGCACAAAC 58.508 34.615 0.00 0.00 33.08 2.93
8 9 7.658525 ACAATATGATTTCCCATAGCACAAA 57.341 32.000 0.00 0.00 33.08 2.83
9 10 7.230510 GGTACAATATGATTTCCCATAGCACAA 59.769 37.037 0.00 0.00 33.08 3.33
10 11 6.714810 GGTACAATATGATTTCCCATAGCACA 59.285 38.462 0.00 0.00 33.08 4.57
11 12 6.714810 TGGTACAATATGATTTCCCATAGCAC 59.285 38.462 0.00 0.00 33.08 4.40
12 13 6.846988 TGGTACAATATGATTTCCCATAGCA 58.153 36.000 0.00 0.00 33.08 3.49
30 31 2.158798 TGTTGAACGGGTGATTGGTACA 60.159 45.455 0.00 0.00 0.00 2.90
31 32 2.496111 TGTTGAACGGGTGATTGGTAC 58.504 47.619 0.00 0.00 0.00 3.34
32 33 2.932855 TGTTGAACGGGTGATTGGTA 57.067 45.000 0.00 0.00 0.00 3.25
34 35 3.658757 ATTTGTTGAACGGGTGATTGG 57.341 42.857 0.00 0.00 0.00 3.16
35 36 5.768317 ACTAATTTGTTGAACGGGTGATTG 58.232 37.500 0.00 0.00 0.00 2.67
36 37 6.399639 AACTAATTTGTTGAACGGGTGATT 57.600 33.333 4.42 0.00 0.00 2.57
38 39 6.056884 AGTAACTAATTTGTTGAACGGGTGA 58.943 36.000 14.41 0.00 0.00 4.02
39 40 6.308371 AGTAACTAATTTGTTGAACGGGTG 57.692 37.500 14.41 0.00 0.00 4.61
41 42 7.041235 TGGTTAGTAACTAATTTGTTGAACGGG 60.041 37.037 14.41 0.00 0.00 5.28
43 44 9.719279 TTTGGTTAGTAACTAATTTGTTGAACG 57.281 29.630 14.41 0.00 31.71 3.95
47 48 9.790389 TGTGTTTGGTTAGTAACTAATTTGTTG 57.210 29.630 14.41 0.00 31.71 3.33
48 49 9.791820 GTGTGTTTGGTTAGTAACTAATTTGTT 57.208 29.630 12.04 10.11 31.71 2.83
49 50 9.181061 AGTGTGTTTGGTTAGTAACTAATTTGT 57.819 29.630 12.04 0.00 31.71 2.83
56 57 9.623000 AATTAAGAGTGTGTTTGGTTAGTAACT 57.377 29.630 12.65 0.00 0.00 2.24
60 61 7.664318 CCCTAATTAAGAGTGTGTTTGGTTAGT 59.336 37.037 0.00 0.00 0.00 2.24
61 62 7.361799 GCCCTAATTAAGAGTGTGTTTGGTTAG 60.362 40.741 0.00 0.00 0.00 2.34
62 63 6.431852 GCCCTAATTAAGAGTGTGTTTGGTTA 59.568 38.462 0.00 0.00 0.00 2.85
63 64 5.243060 GCCCTAATTAAGAGTGTGTTTGGTT 59.757 40.000 0.00 0.00 0.00 3.67
64 65 4.765339 GCCCTAATTAAGAGTGTGTTTGGT 59.235 41.667 0.00 0.00 0.00 3.67
65 66 4.157840 GGCCCTAATTAAGAGTGTGTTTGG 59.842 45.833 0.00 0.00 0.00 3.28
66 67 5.010282 AGGCCCTAATTAAGAGTGTGTTTG 58.990 41.667 0.00 0.00 0.00 2.93
67 68 5.014228 AGAGGCCCTAATTAAGAGTGTGTTT 59.986 40.000 0.00 0.00 0.00 2.83
69 70 4.104831 AGAGGCCCTAATTAAGAGTGTGT 58.895 43.478 0.00 0.00 0.00 3.72
70 71 4.762289 AGAGGCCCTAATTAAGAGTGTG 57.238 45.455 0.00 0.00 0.00 3.82
71 72 5.250774 TCAAAGAGGCCCTAATTAAGAGTGT 59.749 40.000 0.00 0.00 0.00 3.55
72 73 5.745227 TCAAAGAGGCCCTAATTAAGAGTG 58.255 41.667 0.00 0.00 0.00 3.51
73 74 6.582929 ATCAAAGAGGCCCTAATTAAGAGT 57.417 37.500 0.00 0.00 0.00 3.24
74 75 7.682981 GCAAATCAAAGAGGCCCTAATTAAGAG 60.683 40.741 0.00 0.00 0.00 2.85
75 76 6.096846 GCAAATCAAAGAGGCCCTAATTAAGA 59.903 38.462 0.00 0.00 0.00 2.10
76 77 6.127366 TGCAAATCAAAGAGGCCCTAATTAAG 60.127 38.462 0.00 0.00 0.00 1.85
77 78 5.719085 TGCAAATCAAAGAGGCCCTAATTAA 59.281 36.000 0.00 0.00 0.00 1.40
78 79 5.268387 TGCAAATCAAAGAGGCCCTAATTA 58.732 37.500 0.00 0.00 0.00 1.40
80 81 3.703052 CTGCAAATCAAAGAGGCCCTAAT 59.297 43.478 0.00 0.00 0.00 1.73
81 82 3.091545 CTGCAAATCAAAGAGGCCCTAA 58.908 45.455 0.00 0.00 0.00 2.69
82 83 2.621407 CCTGCAAATCAAAGAGGCCCTA 60.621 50.000 0.00 0.00 0.00 3.53
83 84 1.553706 CTGCAAATCAAAGAGGCCCT 58.446 50.000 0.00 0.00 0.00 5.19
84 85 0.533951 CCTGCAAATCAAAGAGGCCC 59.466 55.000 0.00 0.00 0.00 5.80
85 86 1.549203 TCCTGCAAATCAAAGAGGCC 58.451 50.000 0.00 0.00 0.00 5.19
86 87 2.100418 GGATCCTGCAAATCAAAGAGGC 59.900 50.000 3.84 0.00 0.00 4.70
87 88 3.629087 AGGATCCTGCAAATCAAAGAGG 58.371 45.455 15.29 0.00 0.00 3.69
89 90 7.378181 GTTTTTAGGATCCTGCAAATCAAAGA 58.622 34.615 25.28 7.24 0.00 2.52
91 92 6.155827 CGTTTTTAGGATCCTGCAAATCAAA 58.844 36.000 25.28 11.77 0.00 2.69
92 93 5.242838 ACGTTTTTAGGATCCTGCAAATCAA 59.757 36.000 25.28 5.60 0.00 2.57
93 94 4.764823 ACGTTTTTAGGATCCTGCAAATCA 59.235 37.500 25.28 6.54 0.00 2.57
94 95 5.310720 ACGTTTTTAGGATCCTGCAAATC 57.689 39.130 25.28 18.20 0.00 2.17
95 96 5.357032 CCTACGTTTTTAGGATCCTGCAAAT 59.643 40.000 25.28 10.75 41.29 2.32
96 97 4.698304 CCTACGTTTTTAGGATCCTGCAAA 59.302 41.667 25.28 18.81 41.29 3.68
97 98 4.020039 TCCTACGTTTTTAGGATCCTGCAA 60.020 41.667 25.28 13.90 42.41 4.08
98 99 3.516300 TCCTACGTTTTTAGGATCCTGCA 59.484 43.478 25.28 8.01 42.41 4.41
99 100 4.133013 TCCTACGTTTTTAGGATCCTGC 57.867 45.455 25.28 8.08 42.41 4.85
101 102 4.463891 TCGTTCCTACGTTTTTAGGATCCT 59.536 41.667 20.48 20.48 45.85 3.24
102 103 4.747810 TCGTTCCTACGTTTTTAGGATCC 58.252 43.478 2.48 2.48 45.85 3.36
103 104 6.587608 TCTTTCGTTCCTACGTTTTTAGGATC 59.412 38.462 5.64 4.66 45.85 3.36
104 105 6.458210 TCTTTCGTTCCTACGTTTTTAGGAT 58.542 36.000 5.64 0.00 45.85 3.24
115 116 4.514066 ACCATGTGTTTCTTTCGTTCCTAC 59.486 41.667 0.00 0.00 0.00 3.18
117 118 3.551846 ACCATGTGTTTCTTTCGTTCCT 58.448 40.909 0.00 0.00 0.00 3.36
120 121 4.710324 TCCTACCATGTGTTTCTTTCGTT 58.290 39.130 0.00 0.00 0.00 3.85
121 122 4.345859 TCCTACCATGTGTTTCTTTCGT 57.654 40.909 0.00 0.00 0.00 3.85
122 123 5.523916 CCTATCCTACCATGTGTTTCTTTCG 59.476 44.000 0.00 0.00 0.00 3.46
123 124 5.823045 CCCTATCCTACCATGTGTTTCTTTC 59.177 44.000 0.00 0.00 0.00 2.62
124 125 5.491078 TCCCTATCCTACCATGTGTTTCTTT 59.509 40.000 0.00 0.00 0.00 2.52
128 129 4.446311 GCATCCCTATCCTACCATGTGTTT 60.446 45.833 0.00 0.00 0.00 2.83
129 130 3.073062 GCATCCCTATCCTACCATGTGTT 59.927 47.826 0.00 0.00 0.00 3.32
130 131 2.639839 GCATCCCTATCCTACCATGTGT 59.360 50.000 0.00 0.00 0.00 3.72
131 132 2.026822 GGCATCCCTATCCTACCATGTG 60.027 54.545 0.00 0.00 0.00 3.21
132 133 2.157942 AGGCATCCCTATCCTACCATGT 60.158 50.000 0.00 0.00 40.58 3.21
134 135 2.563134 GGAGGCATCCCTATCCTACCAT 60.563 54.545 5.99 0.00 43.12 3.55
135 136 1.203313 GGAGGCATCCCTATCCTACCA 60.203 57.143 5.99 0.00 43.12 3.25
136 137 1.574263 GGAGGCATCCCTATCCTACC 58.426 60.000 5.99 0.00 43.12 3.18
137 138 1.187087 CGGAGGCATCCCTATCCTAC 58.813 60.000 12.67 0.00 43.12 3.18
139 140 1.915769 GCGGAGGCATCCCTATCCT 60.916 63.158 12.67 0.00 43.12 3.24
140 141 2.217038 TGCGGAGGCATCCCTATCC 61.217 63.158 12.67 0.00 46.21 2.59
141 142 3.471620 TGCGGAGGCATCCCTATC 58.528 61.111 12.67 0.00 46.21 2.08
152 153 1.207089 TCAACCATCTACCTTGCGGAG 59.793 52.381 0.00 0.00 0.00 4.63
153 154 1.271856 TCAACCATCTACCTTGCGGA 58.728 50.000 0.00 0.00 0.00 5.54
156 157 5.009610 TGAGTTTTTCAACCATCTACCTTGC 59.990 40.000 0.00 0.00 32.70 4.01
157 158 6.633500 TGAGTTTTTCAACCATCTACCTTG 57.367 37.500 0.00 0.00 32.70 3.61
158 159 8.934023 TTATGAGTTTTTCAACCATCTACCTT 57.066 30.769 0.00 0.00 39.77 3.50
159 160 9.533831 AATTATGAGTTTTTCAACCATCTACCT 57.466 29.630 0.00 0.00 39.77 3.08
163 164 8.992073 GCAAAATTATGAGTTTTTCAACCATCT 58.008 29.630 0.00 0.00 39.77 2.90
164 165 8.772705 TGCAAAATTATGAGTTTTTCAACCATC 58.227 29.630 0.00 0.00 39.77 3.51
165 166 8.674263 TGCAAAATTATGAGTTTTTCAACCAT 57.326 26.923 0.00 0.00 39.77 3.55
166 167 8.498054 TTGCAAAATTATGAGTTTTTCAACCA 57.502 26.923 0.00 0.00 39.77 3.67
167 168 7.587392 GCTTGCAAAATTATGAGTTTTTCAACC 59.413 33.333 0.00 0.00 39.77 3.77
168 169 7.318674 CGCTTGCAAAATTATGAGTTTTTCAAC 59.681 33.333 0.00 0.00 39.77 3.18
169 170 7.010923 ACGCTTGCAAAATTATGAGTTTTTCAA 59.989 29.630 0.00 0.00 39.77 2.69
170 171 6.478344 ACGCTTGCAAAATTATGAGTTTTTCA 59.522 30.769 0.00 0.00 40.85 2.69
171 172 6.876804 ACGCTTGCAAAATTATGAGTTTTTC 58.123 32.000 0.00 0.00 0.00 2.29
172 173 6.843069 ACGCTTGCAAAATTATGAGTTTTT 57.157 29.167 0.00 0.00 0.00 1.94
173 174 6.478344 TCAACGCTTGCAAAATTATGAGTTTT 59.522 30.769 0.00 0.00 0.00 2.43
174 175 5.982516 TCAACGCTTGCAAAATTATGAGTTT 59.017 32.000 0.00 0.00 0.00 2.66
176 177 5.119931 TCAACGCTTGCAAAATTATGAGT 57.880 34.783 0.00 0.00 0.00 3.41
178 179 5.468592 ACATCAACGCTTGCAAAATTATGA 58.531 33.333 0.00 2.45 0.00 2.15
180 181 6.423302 TCAAACATCAACGCTTGCAAAATTAT 59.577 30.769 0.00 0.00 0.00 1.28
181 182 5.750547 TCAAACATCAACGCTTGCAAAATTA 59.249 32.000 0.00 0.00 0.00 1.40
182 183 4.569966 TCAAACATCAACGCTTGCAAAATT 59.430 33.333 0.00 0.00 0.00 1.82
183 184 4.118410 TCAAACATCAACGCTTGCAAAAT 58.882 34.783 0.00 0.00 0.00 1.82
184 185 3.515630 TCAAACATCAACGCTTGCAAAA 58.484 36.364 0.00 0.00 0.00 2.44
185 186 3.156511 TCAAACATCAACGCTTGCAAA 57.843 38.095 0.00 0.00 0.00 3.68
186 187 2.859526 TCAAACATCAACGCTTGCAA 57.140 40.000 0.00 0.00 0.00 4.08
187 188 3.243334 TGAATCAAACATCAACGCTTGCA 60.243 39.130 0.00 0.00 0.00 4.08
188 189 3.307674 TGAATCAAACATCAACGCTTGC 58.692 40.909 0.00 0.00 0.00 4.01
189 190 5.740569 CCTATGAATCAAACATCAACGCTTG 59.259 40.000 0.00 0.00 0.00 4.01
190 191 5.163622 CCCTATGAATCAAACATCAACGCTT 60.164 40.000 0.00 0.00 0.00 4.68
191 192 4.336433 CCCTATGAATCAAACATCAACGCT 59.664 41.667 0.00 0.00 0.00 5.07
192 193 4.335315 TCCCTATGAATCAAACATCAACGC 59.665 41.667 0.00 0.00 0.00 4.84
193 194 6.624352 ATCCCTATGAATCAAACATCAACG 57.376 37.500 0.00 0.00 0.00 4.10
194 195 8.908786 TCTATCCCTATGAATCAAACATCAAC 57.091 34.615 0.00 0.00 0.00 3.18
196 197 9.919416 TTTTCTATCCCTATGAATCAAACATCA 57.081 29.630 0.00 0.00 0.00 3.07
198 199 9.699410 TGTTTTCTATCCCTATGAATCAAACAT 57.301 29.630 0.00 0.00 0.00 2.71
199 200 8.956426 GTGTTTTCTATCCCTATGAATCAAACA 58.044 33.333 0.00 0.00 0.00 2.83
201 202 9.699410 ATGTGTTTTCTATCCCTATGAATCAAA 57.301 29.630 0.00 0.00 0.00 2.69
279 2877 9.694137 GAGACTAAATATTCTTAATGGCGTACT 57.306 33.333 0.00 0.00 0.00 2.73
280 2878 9.694137 AGAGACTAAATATTCTTAATGGCGTAC 57.306 33.333 0.00 0.00 0.00 3.67
282 2880 9.614792 AAAGAGACTAAATATTCTTAATGGCGT 57.385 29.630 0.00 0.00 30.19 5.68
315 2913 4.406003 AGAGGGAGCGTGTAATTTCTATGT 59.594 41.667 0.00 0.00 0.00 2.29
317 2915 4.406003 ACAGAGGGAGCGTGTAATTTCTAT 59.594 41.667 0.00 0.00 0.00 1.98
330 2928 2.981859 TAATTCGGAACAGAGGGAGC 57.018 50.000 0.00 0.00 0.00 4.70
338 2936 9.549509 CGAATCTAAAACAATTAATTCGGAACA 57.450 29.630 0.00 0.00 40.85 3.18
341 2939 9.158233 AGACGAATCTAAAACAATTAATTCGGA 57.842 29.630 16.59 0.00 45.78 4.55
350 2948 8.627403 TCCGTATCTAGACGAATCTAAAACAAT 58.373 33.333 5.60 0.00 45.82 2.71
353 2951 8.074972 ACATCCGTATCTAGACGAATCTAAAAC 58.925 37.037 5.60 0.00 45.82 2.43
364 2962 8.047395 GGGTGTCGATACATCCGTATCTAGAC 62.047 50.000 14.58 10.56 46.78 2.59
375 2973 4.693283 TCTGAAATGGGTGTCGATACATC 58.307 43.478 14.58 6.32 38.08 3.06
378 2976 4.504858 ACTTCTGAAATGGGTGTCGATAC 58.495 43.478 3.32 3.32 0.00 2.24
383 2981 6.410540 AGAGAATACTTCTGAAATGGGTGTC 58.589 40.000 0.00 0.00 40.87 3.67
385 2983 5.819901 GGAGAGAATACTTCTGAAATGGGTG 59.180 44.000 0.00 0.00 40.87 4.61
386 2984 5.395768 CGGAGAGAATACTTCTGAAATGGGT 60.396 44.000 0.00 0.00 40.87 4.51
388 2986 5.665459 ACGGAGAGAATACTTCTGAAATGG 58.335 41.667 0.00 0.00 40.87 3.16
416 3014 9.429109 TGACCAGATTTTATATGTAGACTACCA 57.571 33.333 10.14 0.00 0.00 3.25
429 3027 9.480053 CAAAGTTTGACATTGACCAGATTTTAT 57.520 29.630 10.19 0.00 29.04 1.40
430 3028 8.474025 ACAAAGTTTGACATTGACCAGATTTTA 58.526 29.630 22.23 0.00 31.86 1.52
431 3029 7.330262 ACAAAGTTTGACATTGACCAGATTTT 58.670 30.769 22.23 0.00 31.86 1.82
432 3030 6.877236 ACAAAGTTTGACATTGACCAGATTT 58.123 32.000 22.23 0.00 31.86 2.17
433 3031 6.096705 TGACAAAGTTTGACATTGACCAGATT 59.903 34.615 22.23 0.00 31.86 2.40
434 3032 5.593909 TGACAAAGTTTGACATTGACCAGAT 59.406 36.000 22.23 0.00 31.86 2.90
435 3033 4.946772 TGACAAAGTTTGACATTGACCAGA 59.053 37.500 22.23 0.00 31.86 3.86
436 3034 5.247507 TGACAAAGTTTGACATTGACCAG 57.752 39.130 22.23 0.00 31.86 4.00
437 3035 5.184864 AGTTGACAAAGTTTGACATTGACCA 59.815 36.000 22.23 3.46 35.43 4.02
438 3036 5.650543 AGTTGACAAAGTTTGACATTGACC 58.349 37.500 22.23 7.95 35.43 4.02
439 3037 7.581011 AAAGTTGACAAAGTTTGACATTGAC 57.419 32.000 22.23 15.70 37.50 3.18
539 3137 9.274065 CGTTTCCTTTTAGTCTGCATATAAAAC 57.726 33.333 6.73 0.00 0.00 2.43
540 3138 8.455682 CCGTTTCCTTTTAGTCTGCATATAAAA 58.544 33.333 9.29 9.29 0.00 1.52
541 3139 7.825270 TCCGTTTCCTTTTAGTCTGCATATAAA 59.175 33.333 0.00 0.00 0.00 1.40
542 3140 7.332557 TCCGTTTCCTTTTAGTCTGCATATAA 58.667 34.615 0.00 0.00 0.00 0.98
543 3141 6.880484 TCCGTTTCCTTTTAGTCTGCATATA 58.120 36.000 0.00 0.00 0.00 0.86
544 3142 5.741011 TCCGTTTCCTTTTAGTCTGCATAT 58.259 37.500 0.00 0.00 0.00 1.78
545 3143 5.155278 TCCGTTTCCTTTTAGTCTGCATA 57.845 39.130 0.00 0.00 0.00 3.14
546 3144 4.003648 CTCCGTTTCCTTTTAGTCTGCAT 58.996 43.478 0.00 0.00 0.00 3.96
547 3145 3.399330 CTCCGTTTCCTTTTAGTCTGCA 58.601 45.455 0.00 0.00 0.00 4.41
548 3146 2.742589 CCTCCGTTTCCTTTTAGTCTGC 59.257 50.000 0.00 0.00 0.00 4.26
549 3147 4.246458 CTCCTCCGTTTCCTTTTAGTCTG 58.754 47.826 0.00 0.00 0.00 3.51
550 3148 3.902467 ACTCCTCCGTTTCCTTTTAGTCT 59.098 43.478 0.00 0.00 0.00 3.24
551 3149 4.268797 ACTCCTCCGTTTCCTTTTAGTC 57.731 45.455 0.00 0.00 0.00 2.59
552 3150 4.837298 ACTACTCCTCCGTTTCCTTTTAGT 59.163 41.667 0.00 0.00 0.00 2.24
553 3151 5.402997 ACTACTCCTCCGTTTCCTTTTAG 57.597 43.478 0.00 0.00 0.00 1.85
554 3152 6.916360 TTACTACTCCTCCGTTTCCTTTTA 57.084 37.500 0.00 0.00 0.00 1.52
555 3153 5.813513 TTACTACTCCTCCGTTTCCTTTT 57.186 39.130 0.00 0.00 0.00 2.27
556 3154 5.306419 ACTTTACTACTCCTCCGTTTCCTTT 59.694 40.000 0.00 0.00 0.00 3.11
557 3155 4.837298 ACTTTACTACTCCTCCGTTTCCTT 59.163 41.667 0.00 0.00 0.00 3.36
558 3156 4.414677 ACTTTACTACTCCTCCGTTTCCT 58.585 43.478 0.00 0.00 0.00 3.36
559 3157 4.797800 ACTTTACTACTCCTCCGTTTCC 57.202 45.455 0.00 0.00 0.00 3.13
560 3158 8.768957 ATTTTACTTTACTACTCCTCCGTTTC 57.231 34.615 0.00 0.00 0.00 2.78
561 3159 9.565090 AAATTTTACTTTACTACTCCTCCGTTT 57.435 29.630 0.00 0.00 0.00 3.60
562 3160 8.996271 CAAATTTTACTTTACTACTCCTCCGTT 58.004 33.333 0.00 0.00 0.00 4.44
563 3161 7.118825 GCAAATTTTACTTTACTACTCCTCCGT 59.881 37.037 0.00 0.00 0.00 4.69
564 3162 7.333672 AGCAAATTTTACTTTACTACTCCTCCG 59.666 37.037 0.00 0.00 0.00 4.63
565 3163 8.563123 AGCAAATTTTACTTTACTACTCCTCC 57.437 34.615 0.00 0.00 0.00 4.30
566 3164 8.666573 GGAGCAAATTTTACTTTACTACTCCTC 58.333 37.037 0.00 0.00 36.67 3.71
567 3165 8.161425 TGGAGCAAATTTTACTTTACTACTCCT 58.839 33.333 0.00 0.00 39.59 3.69
568 3166 8.331730 TGGAGCAAATTTTACTTTACTACTCC 57.668 34.615 0.00 0.00 39.38 3.85
589 3187 8.930846 ATGGAGTATGAAAAGGAAATATGGAG 57.069 34.615 0.00 0.00 0.00 3.86
605 3203 4.380444 CCGGGTTCAAAACAATGGAGTATG 60.380 45.833 0.00 0.00 0.00 2.39
606 3204 3.761752 CCGGGTTCAAAACAATGGAGTAT 59.238 43.478 0.00 0.00 0.00 2.12
621 3219 4.979657 GGATCCTTTCCCGGGTTC 57.020 61.111 22.86 8.86 38.75 3.62
627 3225 7.410174 ATTTTTAAAAATGGGGATCCTTTCCC 58.590 34.615 22.30 4.64 45.60 3.97
673 3585 0.461339 TTGATAAGGCCTCGTTCCGC 60.461 55.000 5.23 0.00 0.00 5.54
676 3588 1.664873 GGGTTGATAAGGCCTCGTTC 58.335 55.000 5.23 3.94 0.00 3.95
717 3630 2.436646 CTTCTCGCCGTTGCCCAT 60.437 61.111 0.00 0.00 0.00 4.00
773 3686 2.106683 CGAAGTGGGATGCCGTTCC 61.107 63.158 11.22 0.00 34.83 3.62
774 3687 2.750888 GCGAAGTGGGATGCCGTTC 61.751 63.158 7.82 7.82 0.00 3.95
775 3688 2.746277 GCGAAGTGGGATGCCGTT 60.746 61.111 0.00 0.00 0.00 4.44
776 3689 3.254024 AAGCGAAGTGGGATGCCGT 62.254 57.895 0.00 0.00 0.00 5.68
928 3853 4.521062 CGGAAGCTCGGGAGGCTG 62.521 72.222 0.00 0.00 40.19 4.85
945 3870 0.248621 CGGATTGGAATGCGGAAAGC 60.249 55.000 5.45 0.00 44.92 3.51
946 3871 3.924238 CGGATTGGAATGCGGAAAG 57.076 52.632 5.45 0.00 44.92 2.62
1336 4296 3.661648 TTGAGCAGGGCCCCTTCC 61.662 66.667 21.43 6.52 0.00 3.46
1414 4382 3.404224 AGACGGAGATACTGAGCGATA 57.596 47.619 0.00 0.00 0.00 2.92
1419 4387 3.066064 CAGACCAAGACGGAGATACTGAG 59.934 52.174 0.00 0.00 38.63 3.35
1424 4392 3.054287 AGAGTCAGACCAAGACGGAGATA 60.054 47.826 0.00 0.00 40.84 1.98
1441 4432 6.368516 CAGAGAAGAAAAACCAGATCAGAGTC 59.631 42.308 0.00 0.00 0.00 3.36
1443 4434 5.642919 CCAGAGAAGAAAAACCAGATCAGAG 59.357 44.000 0.00 0.00 0.00 3.35
1572 4564 0.323178 ATCAGCTTGGCTCTTGGGTG 60.323 55.000 0.00 0.00 36.40 4.61
1573 4565 0.323178 CATCAGCTTGGCTCTTGGGT 60.323 55.000 0.00 0.00 36.40 4.51
1574 4566 1.664321 GCATCAGCTTGGCTCTTGGG 61.664 60.000 0.00 0.00 36.40 4.12
1575 4567 0.963856 TGCATCAGCTTGGCTCTTGG 60.964 55.000 3.06 0.00 42.74 3.61
1602 4594 7.073854 ACACCTACTAAGCTAGAAATCCCATA 58.926 38.462 0.00 0.00 0.00 2.74
1635 4639 4.523083 TGTCAGACAAAACCAAGCTAAGT 58.477 39.130 0.00 0.00 0.00 2.24
1680 4685 2.452064 ATGGGCCAGTATCCCCGTG 61.452 63.158 13.78 0.00 44.58 4.94
1722 4727 1.078918 CAGCAGCTCATGGACGGAA 60.079 57.895 0.00 0.00 0.00 4.30
1809 4814 6.643770 CAGAGAATCACCAAACAAAGAAATGG 59.356 38.462 0.00 0.00 37.82 3.16
1842 4847 9.926158 ATCAGCAATAATGAACAACAATTACAA 57.074 25.926 0.00 0.00 0.00 2.41
1945 5929 2.103094 TCCCTACATTCTCATCGCCTTG 59.897 50.000 0.00 0.00 0.00 3.61
1950 5934 4.522405 AGATCAGTCCCTACATTCTCATCG 59.478 45.833 0.00 0.00 0.00 3.84
2020 6004 2.669300 TCAGTGCTCTCATCAGAAGC 57.331 50.000 0.00 0.00 0.00 3.86
2196 6478 8.739972 AGACAAAGAAAGTAAAAGCTGAAAGAA 58.260 29.630 0.00 0.00 34.07 2.52
2218 6500 7.270757 AGTAATGCAATACAAACAACAGACA 57.729 32.000 14.21 0.00 0.00 3.41
2272 7326 3.903090 ACATGTGGAACCATGGAAACAAT 59.097 39.130 21.47 6.91 45.21 2.71
2296 7350 4.161333 CAGCAAAAACAAGATGACGGATC 58.839 43.478 0.00 0.00 0.00 3.36
2300 7355 3.624326 TCCAGCAAAAACAAGATGACG 57.376 42.857 0.00 0.00 0.00 4.35
2311 7366 8.630054 ACAAAGTACAGTATATTCCAGCAAAA 57.370 30.769 0.00 0.00 0.00 2.44
2313 7368 7.663905 ACAACAAAGTACAGTATATTCCAGCAA 59.336 33.333 0.00 0.00 0.00 3.91
2421 7477 1.482593 ACGGCTTCCTCCAGTTATGAG 59.517 52.381 0.00 0.00 0.00 2.90
2496 7552 3.481559 TCCTCTGTCTTCTTGGAGGAT 57.518 47.619 6.47 0.00 46.24 3.24
2499 7555 3.696045 TCTCTCCTCTGTCTTCTTGGAG 58.304 50.000 0.00 0.00 44.00 3.86
2703 7760 4.705023 CCTGATACCCCTTGGTTTAAACAG 59.295 45.833 19.57 9.34 44.75 3.16
3001 8060 3.724374 TCCAAAACTAAGTGAGTGGACG 58.276 45.455 0.00 0.00 38.87 4.79
3037 8102 7.768240 TCTTTTTCCTGTAAAACCAGAGAAAC 58.232 34.615 0.00 0.00 36.79 2.78
3257 8322 2.414994 ACATCAAGCATGTGGAGAGG 57.585 50.000 0.00 0.00 44.70 3.69
3301 8453 8.032451 ACAAAACTGCAAAACAAAGTACAGTAT 58.968 29.630 0.00 0.00 37.38 2.12
3312 8464 7.763528 AGATACATTTGACAAAACTGCAAAACA 59.236 29.630 4.41 0.00 35.44 2.83
3379 8531 8.363390 TGAATAGGCAACATTTGTAATTTGTCA 58.637 29.630 0.00 0.00 41.41 3.58
3505 8667 5.567423 GCTTGGGAAGAGCATACATGTTTTT 60.567 40.000 2.30 0.00 39.89 1.94
3519 8681 0.700564 ATGCAAGAGGCTTGGGAAGA 59.299 50.000 9.01 0.00 45.15 2.87
3752 8922 4.500035 GGCTTTGTCCTAAGTAGATCTCCG 60.500 50.000 0.00 0.00 0.00 4.63
3854 9024 7.986085 AGCTTATTGCATAATAACTTCGGAT 57.014 32.000 0.00 0.00 45.94 4.18
3857 9027 7.850982 ACGAAAGCTTATTGCATAATAACTTCG 59.149 33.333 0.00 15.46 45.94 3.79
3981 9151 8.217799 TCTCCAATTACTTTTTCTTCTTCCTCA 58.782 33.333 0.00 0.00 0.00 3.86
4041 9211 8.425703 GCTCTTATATTTCTTTACAGAGGGAGT 58.574 37.037 0.00 0.00 0.00 3.85
4042 9212 8.424918 TGCTCTTATATTTCTTTACAGAGGGAG 58.575 37.037 0.00 0.00 0.00 4.30
4043 9213 8.319057 TGCTCTTATATTTCTTTACAGAGGGA 57.681 34.615 0.00 0.00 0.00 4.20
4044 9214 9.566432 AATGCTCTTATATTTCTTTACAGAGGG 57.434 33.333 0.00 0.00 0.00 4.30
4110 9280 9.710818 ACATCTAAATACTACTCCCTCTGTAAA 57.289 33.333 0.00 0.00 0.00 2.01
4111 9281 9.710818 AACATCTAAATACTACTCCCTCTGTAA 57.289 33.333 0.00 0.00 0.00 2.41
4112 9282 9.132923 CAACATCTAAATACTACTCCCTCTGTA 57.867 37.037 0.00 0.00 0.00 2.74
4113 9283 7.620094 ACAACATCTAAATACTACTCCCTCTGT 59.380 37.037 0.00 0.00 0.00 3.41
4114 9284 8.012957 ACAACATCTAAATACTACTCCCTCTG 57.987 38.462 0.00 0.00 0.00 3.35
4115 9285 8.611051 AACAACATCTAAATACTACTCCCTCT 57.389 34.615 0.00 0.00 0.00 3.69
4116 9286 9.315525 GAAACAACATCTAAATACTACTCCCTC 57.684 37.037 0.00 0.00 0.00 4.30
4117 9287 8.265764 GGAAACAACATCTAAATACTACTCCCT 58.734 37.037 0.00 0.00 0.00 4.20
4118 9288 8.265764 AGGAAACAACATCTAAATACTACTCCC 58.734 37.037 0.00 0.00 0.00 4.30
4119 9289 9.668497 AAGGAAACAACATCTAAATACTACTCC 57.332 33.333 0.00 0.00 0.00 3.85
4264 9541 6.467677 GGCTAACTAAGGATCATGCATTAGA 58.532 40.000 10.47 0.00 36.10 2.10
4324 9606 2.835764 ACCTAAGTTAGATGCCAACGGA 59.164 45.455 11.66 0.00 0.00 4.69
4326 9608 3.118738 AGGACCTAAGTTAGATGCCAACG 60.119 47.826 11.66 0.00 0.00 4.10
4331 9613 4.833390 ACAACAGGACCTAAGTTAGATGC 58.167 43.478 11.66 0.00 0.00 3.91
4342 9624 5.163131 ACATTAACCAGTTACAACAGGACCT 60.163 40.000 10.19 0.00 37.75 3.85
4475 9757 0.394352 ATGCCGTTGGATCTGGGAAC 60.394 55.000 0.00 0.00 0.00 3.62
4544 9826 9.813826 ATATACCCAGCTTCTAAAATATTGCTT 57.186 29.630 0.00 0.00 0.00 3.91
4554 9836 7.426606 TGTGTTACATATACCCAGCTTCTAA 57.573 36.000 0.00 0.00 0.00 2.10
4613 9896 0.756903 CCATCTACTTACACCGGGGG 59.243 60.000 9.50 0.00 0.00 5.40
4760 10045 2.093816 TGCCAACACAAAACATTCAGCA 60.094 40.909 0.00 0.00 0.00 4.41
4762 10047 3.125316 CCTGCCAACACAAAACATTCAG 58.875 45.455 0.00 0.00 0.00 3.02
4805 10090 3.529341 ATCACACGCAACGCCAGGA 62.529 57.895 0.00 0.00 0.00 3.86
4818 10105 1.971167 GCCCGCAACTTGGATCACA 60.971 57.895 0.00 0.00 0.00 3.58
4820 10107 1.675310 CAGCCCGCAACTTGGATCA 60.675 57.895 0.00 0.00 0.00 2.92
4833 10120 0.597377 CCGCAAAAAGTTGTCAGCCC 60.597 55.000 0.00 0.00 37.06 5.19
4860 10147 2.098117 GCTTCTTCTGCCATTGCGTAAT 59.902 45.455 0.00 0.00 41.78 1.89
4914 10201 6.184789 TGGACAAAACATAACCCTAGGATTC 58.815 40.000 11.48 0.00 0.00 2.52
4977 10264 8.349983 AGTTAGTTCACAACATTCAAACCATAC 58.650 33.333 0.00 0.00 0.00 2.39
5004 10291 2.955660 GTGACAACATTCAAACCTCCCA 59.044 45.455 0.00 0.00 0.00 4.37
5008 10295 3.960102 ACCATGTGACAACATTCAAACCT 59.040 39.130 0.00 0.00 44.94 3.50
5009 10296 4.037923 AGACCATGTGACAACATTCAAACC 59.962 41.667 0.00 0.00 44.94 3.27
5012 10299 3.498018 CGAGACCATGTGACAACATTCAA 59.502 43.478 0.00 0.00 44.94 2.69
5046 10333 7.361713 GCAAGCTACAGAACAATTGGTTATACA 60.362 37.037 10.83 0.00 40.63 2.29
5058 10345 6.758254 TGCTATATATGCAAGCTACAGAACA 58.242 36.000 8.68 0.00 37.51 3.18
5078 10365 5.324409 ACAGGTGAATTGGATTTCTTGCTA 58.676 37.500 0.00 0.00 0.00 3.49
5079 10366 4.154942 ACAGGTGAATTGGATTTCTTGCT 58.845 39.130 0.00 0.00 0.00 3.91
5080 10367 4.525912 ACAGGTGAATTGGATTTCTTGC 57.474 40.909 0.00 0.00 0.00 4.01
5081 10368 7.337689 TGAGATACAGGTGAATTGGATTTCTTG 59.662 37.037 0.00 0.00 0.00 3.02
5082 10369 7.405292 TGAGATACAGGTGAATTGGATTTCTT 58.595 34.615 0.00 0.00 0.00 2.52
5083 10370 6.962182 TGAGATACAGGTGAATTGGATTTCT 58.038 36.000 0.00 0.00 0.00 2.52
5084 10371 7.256756 CTGAGATACAGGTGAATTGGATTTC 57.743 40.000 0.00 0.00 42.39 2.17
5105 10392 1.915489 AGATGCATAACCACCACCTGA 59.085 47.619 0.00 0.00 0.00 3.86
5136 10425 3.017442 GGCAACTTAAGTGGAGGAATCC 58.983 50.000 14.52 0.37 0.00 3.01
5165 10454 2.271800 CGACATAAGCAGGTGAAGACC 58.728 52.381 0.00 0.00 43.52 3.85
5166 10455 1.661112 GCGACATAAGCAGGTGAAGAC 59.339 52.381 0.00 0.00 34.19 3.01
5176 10465 6.634436 CCATAGAATGAAAAAGCGACATAAGC 59.366 38.462 0.00 0.00 0.00 3.09
5180 10469 5.647658 TCACCATAGAATGAAAAAGCGACAT 59.352 36.000 0.00 0.00 0.00 3.06
5184 10473 5.883661 ACATCACCATAGAATGAAAAAGCG 58.116 37.500 0.00 0.00 0.00 4.68
5188 10477 7.828717 TGAAGCTACATCACCATAGAATGAAAA 59.171 33.333 0.00 0.00 0.00 2.29
5189 10478 7.337938 TGAAGCTACATCACCATAGAATGAAA 58.662 34.615 0.00 0.00 0.00 2.69
5193 10482 6.463614 GGTCTGAAGCTACATCACCATAGAAT 60.464 42.308 0.00 0.00 0.00 2.40
5195 10484 4.342378 GGTCTGAAGCTACATCACCATAGA 59.658 45.833 0.00 0.00 0.00 1.98
5198 10487 2.171448 GGGTCTGAAGCTACATCACCAT 59.829 50.000 0.00 0.00 0.00 3.55
5199 10488 1.555075 GGGTCTGAAGCTACATCACCA 59.445 52.381 0.00 0.00 0.00 4.17
5202 10491 3.378512 AGATGGGTCTGAAGCTACATCA 58.621 45.455 0.00 0.00 37.70 3.07
5207 10496 5.453903 GCATTTCTAGATGGGTCTGAAGCTA 60.454 44.000 0.00 0.00 35.87 3.32
5210 10499 4.815308 CAGCATTTCTAGATGGGTCTGAAG 59.185 45.833 0.00 0.00 35.87 3.02
5257 10546 4.719369 AGACCGAGCGCGACCAAC 62.719 66.667 12.10 0.00 40.82 3.77
5267 10556 0.811915 AATCGAGTGGTGAGACCGAG 59.188 55.000 0.00 0.00 42.58 4.63
5269 10558 0.526211 TGAATCGAGTGGTGAGACCG 59.474 55.000 0.00 0.00 42.58 4.79
5275 10564 4.377022 CCGTTAAGTTTGAATCGAGTGGTG 60.377 45.833 0.00 0.00 0.00 4.17
5276 10565 3.744426 CCGTTAAGTTTGAATCGAGTGGT 59.256 43.478 0.00 0.00 0.00 4.16
5277 10566 3.991773 TCCGTTAAGTTTGAATCGAGTGG 59.008 43.478 0.00 0.00 0.00 4.00
5278 10567 5.176958 AGTTCCGTTAAGTTTGAATCGAGTG 59.823 40.000 0.00 0.00 0.00 3.51
5279 10568 5.176958 CAGTTCCGTTAAGTTTGAATCGAGT 59.823 40.000 0.00 0.00 0.00 4.18
5280 10569 5.176958 ACAGTTCCGTTAAGTTTGAATCGAG 59.823 40.000 0.00 0.00 0.00 4.04
5281 10570 5.051816 ACAGTTCCGTTAAGTTTGAATCGA 58.948 37.500 0.00 0.00 0.00 3.59
5282 10571 5.338614 ACAGTTCCGTTAAGTTTGAATCG 57.661 39.130 0.00 0.00 0.00 3.34
5283 10572 9.148104 AGTATACAGTTCCGTTAAGTTTGAATC 57.852 33.333 5.50 0.00 0.00 2.52
5284 10573 9.498176 AAGTATACAGTTCCGTTAAGTTTGAAT 57.502 29.630 5.50 0.00 0.00 2.57
5285 10574 8.767085 CAAGTATACAGTTCCGTTAAGTTTGAA 58.233 33.333 5.50 0.00 0.00 2.69
5286 10575 8.143193 TCAAGTATACAGTTCCGTTAAGTTTGA 58.857 33.333 5.50 0.00 0.00 2.69
5287 10576 8.301730 TCAAGTATACAGTTCCGTTAAGTTTG 57.698 34.615 5.50 0.00 0.00 2.93
5288 10577 7.117379 GCTCAAGTATACAGTTCCGTTAAGTTT 59.883 37.037 5.50 0.00 0.00 2.66
5289 10578 6.589139 GCTCAAGTATACAGTTCCGTTAAGTT 59.411 38.462 5.50 0.00 0.00 2.66
5290 10579 6.098017 GCTCAAGTATACAGTTCCGTTAAGT 58.902 40.000 5.50 0.00 0.00 2.24
5291 10580 6.034683 GTGCTCAAGTATACAGTTCCGTTAAG 59.965 42.308 5.50 0.00 0.00 1.85
5292 10581 5.865552 GTGCTCAAGTATACAGTTCCGTTAA 59.134 40.000 5.50 0.00 0.00 2.01
5293 10582 5.047872 TGTGCTCAAGTATACAGTTCCGTTA 60.048 40.000 5.50 0.00 0.00 3.18
5294 10583 4.243270 GTGCTCAAGTATACAGTTCCGTT 58.757 43.478 5.50 0.00 0.00 4.44
5295 10584 3.257375 TGTGCTCAAGTATACAGTTCCGT 59.743 43.478 5.50 0.00 0.00 4.69
5296 10585 3.845178 TGTGCTCAAGTATACAGTTCCG 58.155 45.455 5.50 0.00 0.00 4.30
5297 10586 5.106673 GGTTTGTGCTCAAGTATACAGTTCC 60.107 44.000 5.50 0.00 34.88 3.62
5298 10587 5.468746 TGGTTTGTGCTCAAGTATACAGTTC 59.531 40.000 5.50 0.00 34.88 3.01
5299 10588 5.373222 TGGTTTGTGCTCAAGTATACAGTT 58.627 37.500 5.50 0.00 34.88 3.16
5300 10589 4.968259 TGGTTTGTGCTCAAGTATACAGT 58.032 39.130 5.50 0.00 34.88 3.55
5301 10590 4.997395 ACTGGTTTGTGCTCAAGTATACAG 59.003 41.667 5.50 9.04 34.88 2.74
5302 10591 4.968259 ACTGGTTTGTGCTCAAGTATACA 58.032 39.130 5.50 0.00 34.88 2.29
5303 10592 5.929992 TGTACTGGTTTGTGCTCAAGTATAC 59.070 40.000 0.98 0.00 34.88 1.47
5304 10593 6.104146 TGTACTGGTTTGTGCTCAAGTATA 57.896 37.500 0.98 0.00 34.88 1.47
5305 10594 4.968259 TGTACTGGTTTGTGCTCAAGTAT 58.032 39.130 0.98 0.00 34.88 2.12
5306 10595 4.409718 TGTACTGGTTTGTGCTCAAGTA 57.590 40.909 0.98 0.00 34.88 2.24
5307 10596 3.275617 TGTACTGGTTTGTGCTCAAGT 57.724 42.857 0.98 0.00 34.88 3.16
5308 10597 4.320494 GGATTGTACTGGTTTGTGCTCAAG 60.320 45.833 0.98 0.00 34.88 3.02
5309 10598 3.568007 GGATTGTACTGGTTTGTGCTCAA 59.432 43.478 0.00 0.00 0.00 3.02
5310 10599 3.146066 GGATTGTACTGGTTTGTGCTCA 58.854 45.455 0.00 0.00 0.00 4.26
5311 10600 2.488153 GGGATTGTACTGGTTTGTGCTC 59.512 50.000 0.00 0.00 0.00 4.26
5312 10601 2.514803 GGGATTGTACTGGTTTGTGCT 58.485 47.619 0.00 0.00 0.00 4.40
5313 10602 1.199097 CGGGATTGTACTGGTTTGTGC 59.801 52.381 0.00 0.00 0.00 4.57
5314 10603 1.199097 GCGGGATTGTACTGGTTTGTG 59.801 52.381 0.00 0.00 0.00 3.33
5315 10604 1.202830 TGCGGGATTGTACTGGTTTGT 60.203 47.619 0.00 0.00 0.00 2.83
5316 10605 1.199097 GTGCGGGATTGTACTGGTTTG 59.801 52.381 0.00 0.00 0.00 2.93
5317 10606 1.202830 TGTGCGGGATTGTACTGGTTT 60.203 47.619 0.00 0.00 0.00 3.27
5318 10607 0.398696 TGTGCGGGATTGTACTGGTT 59.601 50.000 0.00 0.00 0.00 3.67
5319 10608 0.398696 TTGTGCGGGATTGTACTGGT 59.601 50.000 0.00 0.00 0.00 4.00
5320 10609 0.802494 GTTGTGCGGGATTGTACTGG 59.198 55.000 0.00 0.00 0.00 4.00
5321 10610 1.464608 CAGTTGTGCGGGATTGTACTG 59.535 52.381 0.00 0.00 0.00 2.74
5322 10611 1.808411 CAGTTGTGCGGGATTGTACT 58.192 50.000 0.00 0.00 0.00 2.73
5323 10612 0.168128 GCAGTTGTGCGGGATTGTAC 59.832 55.000 0.00 0.00 40.71 2.90
5324 10613 2.550487 GCAGTTGTGCGGGATTGTA 58.450 52.632 0.00 0.00 40.71 2.41
5325 10614 3.354678 GCAGTTGTGCGGGATTGT 58.645 55.556 0.00 0.00 40.71 2.71
5334 10623 3.460648 GCTACCCTAGGCAGTTGTG 57.539 57.895 2.05 0.00 0.00 3.33
5346 10635 0.972471 ATTGCAAAGCAGGGCTACCC 60.972 55.000 1.71 0.00 45.90 3.69
5347 10636 1.678101 CTATTGCAAAGCAGGGCTACC 59.322 52.381 1.71 0.00 40.61 3.18
5348 10637 2.369394 ACTATTGCAAAGCAGGGCTAC 58.631 47.619 1.71 0.00 40.61 3.58
5349 10638 2.806945 ACTATTGCAAAGCAGGGCTA 57.193 45.000 1.71 0.00 40.61 3.93
5350 10639 2.806945 TACTATTGCAAAGCAGGGCT 57.193 45.000 1.71 0.00 40.61 5.19
5351 10640 3.217626 AGATACTATTGCAAAGCAGGGC 58.782 45.455 1.71 0.00 40.61 5.19
5352 10641 5.615289 ACTAGATACTATTGCAAAGCAGGG 58.385 41.667 1.71 0.00 40.61 4.45
5353 10642 7.928706 AGTTACTAGATACTATTGCAAAGCAGG 59.071 37.037 1.71 0.00 40.61 4.85
5354 10643 8.879342 AGTTACTAGATACTATTGCAAAGCAG 57.121 34.615 1.71 3.78 40.61 4.24
5355 10644 9.314321 GAAGTTACTAGATACTATTGCAAAGCA 57.686 33.333 1.71 0.00 36.47 3.91
5356 10645 9.314321 TGAAGTTACTAGATACTATTGCAAAGC 57.686 33.333 1.71 0.00 0.00 3.51
5376 10665 9.965902 ACATCTAAGATTCTGGTTTATGAAGTT 57.034 29.630 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.