Multiple sequence alignment - TraesCS3A01G078800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G078800 chr3A 100.000 6032 0 0 1 6032 50897239 50891208 0.000000e+00 11140.0
1 TraesCS3A01G078800 chr3A 96.552 58 1 1 544 601 24733467 24733411 1.790000e-15 95.3
2 TraesCS3A01G078800 chr3D 90.318 2675 128 46 2540 5158 39392473 39389874 0.000000e+00 3384.0
3 TraesCS3A01G078800 chr3D 93.289 894 49 7 1693 2580 39393357 39392469 0.000000e+00 1308.0
4 TraesCS3A01G078800 chr3D 87.009 1070 63 29 655 1692 39394415 39393390 0.000000e+00 1136.0
5 TraesCS3A01G078800 chr3D 92.647 748 43 6 5295 6032 39389943 39389198 0.000000e+00 1066.0
6 TraesCS3A01G078800 chr3D 92.308 559 30 4 1 549 39395040 39394485 0.000000e+00 782.0
7 TraesCS3A01G078800 chr3D 96.552 58 1 1 545 601 95239645 95239702 1.790000e-15 95.3
8 TraesCS3A01G078800 chr3B 92.308 2327 144 10 1982 4285 62951878 62949564 0.000000e+00 3273.0
9 TraesCS3A01G078800 chr3B 91.874 763 48 11 5275 6032 62948791 62948038 0.000000e+00 1053.0
10 TraesCS3A01G078800 chr3B 89.410 831 51 22 4356 5158 62949530 62948709 0.000000e+00 1013.0
11 TraesCS3A01G078800 chr3B 87.070 727 45 23 600 1302 62953877 62953176 0.000000e+00 776.0
12 TraesCS3A01G078800 chr3B 90.196 408 24 11 1 402 62954381 62953984 8.960000e-143 518.0
13 TraesCS3A01G078800 chr3B 86.134 476 37 8 1344 1794 62952643 62952172 2.530000e-133 486.0
14 TraesCS3A01G078800 chr3B 88.699 292 17 8 1772 2062 62952148 62951872 5.790000e-90 342.0
15 TraesCS3A01G078800 chr3B 93.443 61 3 1 541 601 727742925 727742984 8.330000e-14 89.8
16 TraesCS3A01G078800 chr5B 96.491 57 2 0 545 601 392494400 392494344 1.790000e-15 95.3
17 TraesCS3A01G078800 chr5B 98.148 54 1 0 548 601 525451602 525451655 1.790000e-15 95.3
18 TraesCS3A01G078800 chr5B 94.915 59 2 1 543 601 655145205 655145262 2.320000e-14 91.6
19 TraesCS3A01G078800 chr4B 95.082 61 2 1 541 601 30364996 30365055 1.790000e-15 95.3
20 TraesCS3A01G078800 chr2B 98.148 54 1 0 548 601 17575755 17575808 1.790000e-15 95.3
21 TraesCS3A01G078800 chr2A 98.148 54 1 0 548 601 469799711 469799658 1.790000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G078800 chr3A 50891208 50897239 6031 True 11140.000000 11140 100.000000 1 6032 1 chr3A.!!$R2 6031
1 TraesCS3A01G078800 chr3D 39389198 39395040 5842 True 1535.200000 3384 91.114200 1 6032 5 chr3D.!!$R1 6031
2 TraesCS3A01G078800 chr3B 62948038 62954381 6343 True 1065.857143 3273 89.384429 1 6032 7 chr3B.!!$R1 6031

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
716 754 0.033228 CCGTCCCTCTGATCTGATGC 59.967 60.0 2.43 0.0 0.00 3.91 F
1394 1955 0.109597 CTGGTCATTTCGTTGCTGCC 60.110 55.0 0.00 0.0 0.00 4.85 F
1895 2561 0.182299 CTCTGGATGGCTTCCTTCCC 59.818 60.0 19.03 0.0 44.37 3.97 F
2216 2944 0.538118 TCACTTATGGTACGGGTGCC 59.462 55.0 0.00 0.0 35.78 5.01 F
3936 4703 0.319405 GCCTTGTCATTGCTTGGCTT 59.681 50.0 0.00 0.0 37.58 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1743 2364 0.388659 AAGCGCACAAAAGGAATGCA 59.611 45.000 11.47 0.0 39.39 3.96 R
3328 4095 0.179004 TCGCATGTTTGACCCACCTT 60.179 50.000 0.00 0.0 0.00 3.50 R
3577 4344 1.905215 ACTCTGGGTGTTCTGATCCAG 59.095 52.381 0.00 0.0 45.92 3.86 R
4009 4776 1.404391 ACAGTATAGTTGCGAGGTCGG 59.596 52.381 0.89 0.0 40.23 4.79 R
5231 6070 0.031585 TAGCGAGCAACGTTCAGTGT 59.968 50.000 0.00 0.0 44.60 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.501610 GACCACCTCCGAGATGGC 59.498 66.667 8.95 0.00 29.24 4.40
217 218 2.030551 CGGCGAGTACCAGATAGCA 58.969 57.895 0.00 0.00 0.00 3.49
247 248 4.351938 TGCGTGGACGAGAACGGG 62.352 66.667 2.73 0.00 44.46 5.28
313 314 0.965866 TCCAGTAGCCCTGACTGACG 60.966 60.000 4.38 0.00 46.01 4.35
335 336 2.654079 CCTCAGGCTCGGCTGAAGT 61.654 63.158 21.28 0.00 0.00 3.01
344 345 2.352814 GCTCGGCTGAAGTTCAAGAGTA 60.353 50.000 22.67 5.12 30.42 2.59
349 350 3.127721 GGCTGAAGTTCAAGAGTATTGGC 59.872 47.826 7.06 3.40 0.00 4.52
351 352 5.178797 GCTGAAGTTCAAGAGTATTGGCTA 58.821 41.667 7.06 0.00 0.00 3.93
402 411 0.604578 GCATGTCCATTGTTGCTGGT 59.395 50.000 0.00 0.00 35.19 4.00
414 423 1.135402 GTTGCTGGTTAATCCTTGGCG 60.135 52.381 0.00 0.00 37.07 5.69
437 446 5.105554 CGATATATGCTTTACAGAGGCTCCT 60.106 44.000 11.71 0.00 0.00 3.69
448 457 4.615513 ACAGAGGCTCCTAACTGTTATCT 58.384 43.478 11.71 0.00 40.03 1.98
483 497 0.038599 TCATCAGGCCATGTGCAACT 59.961 50.000 5.01 0.00 43.89 3.16
493 507 2.937591 CATGTGCAACTTGGATGTGAC 58.062 47.619 0.00 0.00 38.24 3.67
517 531 8.421673 ACGAATTCAGGCTTATAGTTTAGTTC 57.578 34.615 6.22 0.00 0.00 3.01
553 572 6.710597 TGATGTACACAAGATACTACTCCC 57.289 41.667 0.00 0.00 0.00 4.30
554 573 6.432581 TGATGTACACAAGATACTACTCCCT 58.567 40.000 0.00 0.00 0.00 4.20
555 574 6.546403 TGATGTACACAAGATACTACTCCCTC 59.454 42.308 0.00 0.00 0.00 4.30
556 575 5.198965 TGTACACAAGATACTACTCCCTCC 58.801 45.833 0.00 0.00 0.00 4.30
557 576 3.288964 ACACAAGATACTACTCCCTCCG 58.711 50.000 0.00 0.00 0.00 4.63
558 577 3.288964 CACAAGATACTACTCCCTCCGT 58.711 50.000 0.00 0.00 0.00 4.69
559 578 3.315749 CACAAGATACTACTCCCTCCGTC 59.684 52.174 0.00 0.00 0.00 4.79
560 579 2.885894 CAAGATACTACTCCCTCCGTCC 59.114 54.545 0.00 0.00 0.00 4.79
561 580 2.420705 AGATACTACTCCCTCCGTCCT 58.579 52.381 0.00 0.00 0.00 3.85
562 581 3.596101 AGATACTACTCCCTCCGTCCTA 58.404 50.000 0.00 0.00 0.00 2.94
563 582 3.979347 AGATACTACTCCCTCCGTCCTAA 59.021 47.826 0.00 0.00 0.00 2.69
564 583 4.414846 AGATACTACTCCCTCCGTCCTAAA 59.585 45.833 0.00 0.00 0.00 1.85
565 584 3.463048 ACTACTCCCTCCGTCCTAAAA 57.537 47.619 0.00 0.00 0.00 1.52
566 585 3.991683 ACTACTCCCTCCGTCCTAAAAT 58.008 45.455 0.00 0.00 0.00 1.82
567 586 5.134725 ACTACTCCCTCCGTCCTAAAATA 57.865 43.478 0.00 0.00 0.00 1.40
568 587 4.892345 ACTACTCCCTCCGTCCTAAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
569 588 3.991683 ACTCCCTCCGTCCTAAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
570 589 4.359996 ACTCCCTCCGTCCTAAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
571 590 4.161754 ACTCCCTCCGTCCTAAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
572 591 4.098894 TCCCTCCGTCCTAAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
573 592 4.161001 TCCCTCCGTCCTAAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
574 593 4.110482 CCTCCGTCCTAAAATACTTGTCG 58.890 47.826 0.00 0.00 0.00 4.35
575 594 4.110482 CTCCGTCCTAAAATACTTGTCGG 58.890 47.826 0.00 0.00 37.29 4.79
576 595 3.763360 TCCGTCCTAAAATACTTGTCGGA 59.237 43.478 0.00 0.00 41.50 4.55
577 596 4.110482 CCGTCCTAAAATACTTGTCGGAG 58.890 47.826 0.00 0.00 38.03 4.63
578 597 4.110482 CGTCCTAAAATACTTGTCGGAGG 58.890 47.826 0.00 0.00 0.00 4.30
579 598 4.142315 CGTCCTAAAATACTTGTCGGAGGA 60.142 45.833 0.00 0.00 0.00 3.71
580 599 5.622914 CGTCCTAAAATACTTGTCGGAGGAA 60.623 44.000 0.00 0.00 33.76 3.36
581 600 6.346896 GTCCTAAAATACTTGTCGGAGGAAT 58.653 40.000 0.00 0.00 33.76 3.01
582 601 6.258068 GTCCTAAAATACTTGTCGGAGGAATG 59.742 42.308 0.00 0.00 33.76 2.67
583 602 5.527582 CCTAAAATACTTGTCGGAGGAATGG 59.472 44.000 0.00 0.00 0.00 3.16
584 603 4.837093 AAATACTTGTCGGAGGAATGGA 57.163 40.909 0.00 0.00 0.00 3.41
585 604 5.373812 AAATACTTGTCGGAGGAATGGAT 57.626 39.130 0.00 0.00 0.00 3.41
586 605 2.698855 ACTTGTCGGAGGAATGGATG 57.301 50.000 0.00 0.00 0.00 3.51
587 606 1.909302 ACTTGTCGGAGGAATGGATGT 59.091 47.619 0.00 0.00 0.00 3.06
588 607 3.104512 ACTTGTCGGAGGAATGGATGTA 58.895 45.455 0.00 0.00 0.00 2.29
589 608 3.711704 ACTTGTCGGAGGAATGGATGTAT 59.288 43.478 0.00 0.00 0.00 2.29
590 609 4.202264 ACTTGTCGGAGGAATGGATGTATC 60.202 45.833 0.00 0.00 0.00 2.24
591 610 3.576861 TGTCGGAGGAATGGATGTATCT 58.423 45.455 0.00 0.00 0.00 1.98
592 611 4.736473 TGTCGGAGGAATGGATGTATCTA 58.264 43.478 0.00 0.00 0.00 1.98
593 612 4.767409 TGTCGGAGGAATGGATGTATCTAG 59.233 45.833 0.00 0.00 0.00 2.43
594 613 5.010933 GTCGGAGGAATGGATGTATCTAGA 58.989 45.833 0.00 0.00 0.00 2.43
595 614 5.654650 GTCGGAGGAATGGATGTATCTAGAT 59.345 44.000 10.73 10.73 0.00 1.98
596 615 5.654209 TCGGAGGAATGGATGTATCTAGATG 59.346 44.000 15.79 0.00 0.00 2.90
597 616 5.669477 GGAGGAATGGATGTATCTAGATGC 58.331 45.833 15.79 14.54 0.00 3.91
598 617 5.188555 GGAGGAATGGATGTATCTAGATGCA 59.811 44.000 23.38 23.38 37.79 3.96
632 655 6.071108 TGCTAACTGCTTTAACTGAGATCTCT 60.071 38.462 22.95 6.25 43.37 3.10
643 666 8.996651 TTAACTGAGATCTCTATATGTGACCA 57.003 34.615 22.95 0.00 0.00 4.02
646 669 9.766754 AACTGAGATCTCTATATGTGACCATAT 57.233 33.333 22.95 0.00 44.56 1.78
716 754 0.033228 CCGTCCCTCTGATCTGATGC 59.967 60.000 2.43 0.00 0.00 3.91
733 771 0.927537 TGCGTCTGTCTTTGTGTTCG 59.072 50.000 0.00 0.00 0.00 3.95
739 777 2.159099 TCTGTCTTTGTGTTCGCTCAGT 60.159 45.455 0.00 0.00 0.00 3.41
754 792 5.633927 TCGCTCAGTTGAATTCAAATCATG 58.366 37.500 22.07 16.98 37.63 3.07
759 797 6.834876 TCAGTTGAATTCAAATCATGTCGAG 58.165 36.000 22.07 7.15 37.63 4.04
852 892 4.074526 GTGGCGCTCCTCTGCTGA 62.075 66.667 7.64 0.00 0.00 4.26
853 893 4.074526 TGGCGCTCCTCTGCTGAC 62.075 66.667 7.64 0.00 0.00 3.51
880 924 2.821969 TGTCCCGTTTCAGTAGGTACTC 59.178 50.000 0.00 0.00 41.75 2.59
881 925 2.165234 GTCCCGTTTCAGTAGGTACTCC 59.835 54.545 0.00 0.00 41.75 3.85
894 938 9.352191 TCAGTAGGTACTCCTAATAATTCAGAC 57.648 37.037 0.00 0.00 46.46 3.51
918 963 1.153667 GCTCGGGAGTCTCTGCTTG 60.154 63.158 0.00 0.00 0.00 4.01
940 985 3.487942 GGTTCAAAATTTCGAAACCACGG 59.512 43.478 13.81 2.56 0.00 4.94
941 986 4.352887 GTTCAAAATTTCGAAACCACGGA 58.647 39.130 13.81 4.97 0.00 4.69
942 987 3.954999 TCAAAATTTCGAAACCACGGAC 58.045 40.909 13.81 0.00 0.00 4.79
943 988 2.673976 AAATTTCGAAACCACGGACG 57.326 45.000 13.81 0.00 0.00 4.79
944 989 0.236449 AATTTCGAAACCACGGACGC 59.764 50.000 13.81 0.00 0.00 5.19
945 990 0.881159 ATTTCGAAACCACGGACGCA 60.881 50.000 13.81 0.00 0.00 5.24
946 991 1.764180 TTTCGAAACCACGGACGCAC 61.764 55.000 6.47 0.00 0.00 5.34
947 992 4.054455 CGAAACCACGGACGCACG 62.054 66.667 0.00 0.00 40.31 5.34
966 1011 1.644372 CACGCACACGGCAGTTTTA 59.356 52.632 0.00 0.00 46.04 1.52
981 1026 0.736325 TTTTACTGCTCGCTCGCTCC 60.736 55.000 0.00 0.00 0.00 4.70
982 1027 1.595993 TTTACTGCTCGCTCGCTCCT 61.596 55.000 0.00 0.00 0.00 3.69
983 1028 1.994507 TTACTGCTCGCTCGCTCCTC 61.995 60.000 0.00 0.00 0.00 3.71
1114 1184 1.689233 TTCCCTCCGGTCCATCAGG 60.689 63.158 0.00 0.00 0.00 3.86
1258 1328 2.490217 CCTCTGCTACGTCCACCG 59.510 66.667 0.00 0.00 44.03 4.94
1314 1384 2.905880 CGCCCGAGGTCCGTATCT 60.906 66.667 0.00 0.00 36.31 1.98
1318 1388 1.150992 CCGAGGTCCGTATCTCCCT 59.849 63.158 0.00 0.00 36.31 4.20
1319 1389 0.890090 CCGAGGTCCGTATCTCCCTC 60.890 65.000 0.00 0.00 40.10 4.30
1322 1392 1.000041 AGGTCCGTATCTCCCTCCCT 61.000 60.000 0.00 0.00 0.00 4.20
1327 1397 0.251430 CGTATCTCCCTCCCTCCCTC 60.251 65.000 0.00 0.00 0.00 4.30
1328 1398 0.115547 GTATCTCCCTCCCTCCCTCC 59.884 65.000 0.00 0.00 0.00 4.30
1329 1399 1.080927 TATCTCCCTCCCTCCCTCCC 61.081 65.000 0.00 0.00 0.00 4.30
1330 1400 2.929738 ATCTCCCTCCCTCCCTCCCT 62.930 65.000 0.00 0.00 0.00 4.20
1331 1401 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
1332 1402 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
1333 1403 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
1334 1404 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
1335 1405 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
1336 1406 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
1337 1407 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
1338 1408 4.179599 CTCCCTCCCTCCCTCCCC 62.180 77.778 0.00 0.00 0.00 4.81
1339 1409 4.761304 TCCCTCCCTCCCTCCCCT 62.761 72.222 0.00 0.00 0.00 4.79
1340 1410 4.179599 CCCTCCCTCCCTCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
1341 1411 3.039526 CCTCCCTCCCTCCCCTCT 61.040 72.222 0.00 0.00 0.00 3.69
1342 1412 2.285180 CTCCCTCCCTCCCCTCTG 59.715 72.222 0.00 0.00 0.00 3.35
1380 1941 2.167861 GCGTTCGATCCTGCTGGTC 61.168 63.158 9.73 5.92 34.23 4.02
1387 1948 1.740380 CGATCCTGCTGGTCATTTCGT 60.740 52.381 9.73 0.00 34.23 3.85
1394 1955 0.109597 CTGGTCATTTCGTTGCTGCC 60.110 55.000 0.00 0.00 0.00 4.85
1397 1958 0.730494 GTCATTTCGTTGCTGCCTGC 60.730 55.000 0.00 0.00 43.25 4.85
1519 2095 2.915869 AACGCCAGTTCACCCACT 59.084 55.556 0.00 0.00 35.23 4.00
1567 2147 4.363999 CAAAAACTGGCGAATTAACCACA 58.636 39.130 0.00 0.00 0.00 4.17
1627 2207 3.329814 TGCTATTGCCATGATCCTCTGAT 59.670 43.478 0.00 0.00 38.71 2.90
1632 2212 1.882780 GCCATGATCCTCTGATGCCTG 60.883 57.143 0.00 0.00 0.00 4.85
1633 2213 1.697982 CCATGATCCTCTGATGCCTGA 59.302 52.381 0.00 0.00 0.00 3.86
1664 2245 0.875059 GCCTAACAACCTGCACTGAC 59.125 55.000 0.00 0.00 0.00 3.51
1667 2248 3.619979 GCCTAACAACCTGCACTGACTAT 60.620 47.826 0.00 0.00 0.00 2.12
1742 2363 2.268796 TTGGTCTCCATCCCAGATGA 57.731 50.000 6.15 0.00 31.53 2.92
1743 2364 2.502068 TGGTCTCCATCCCAGATGAT 57.498 50.000 6.15 0.00 0.00 2.45
1744 2365 2.052468 TGGTCTCCATCCCAGATGATG 58.948 52.381 6.15 0.00 41.47 3.07
1757 2378 4.430007 CCAGATGATGCATTCCTTTTGTG 58.570 43.478 0.00 0.00 0.00 3.33
1768 2389 2.566913 TCCTTTTGTGCGCTTGTTCTA 58.433 42.857 9.73 0.00 0.00 2.10
1772 2393 4.320494 CCTTTTGTGCGCTTGTTCTAATCT 60.320 41.667 9.73 0.00 0.00 2.40
1774 2395 4.404507 TTGTGCGCTTGTTCTAATCTTC 57.595 40.909 9.73 0.00 0.00 2.87
1781 2402 5.669848 GCGCTTGTTCTAATCTTCTCAGTTG 60.670 44.000 0.00 0.00 0.00 3.16
1784 2450 7.276658 CGCTTGTTCTAATCTTCTCAGTTGTAT 59.723 37.037 0.00 0.00 0.00 2.29
1895 2561 0.182299 CTCTGGATGGCTTCCTTCCC 59.818 60.000 19.03 0.00 44.37 3.97
1932 2598 3.788672 CCAACTGGAGGTATGGCTC 57.211 57.895 0.00 0.00 37.39 4.70
1958 2624 7.254117 CGGATGATCTTTATGTTCGGTATATGC 60.254 40.741 0.00 0.00 0.00 3.14
1960 2626 9.155975 GATGATCTTTATGTTCGGTATATGCTT 57.844 33.333 0.00 0.00 0.00 3.91
1964 2630 8.500753 TCTTTATGTTCGGTATATGCTTGTTT 57.499 30.769 0.00 0.00 0.00 2.83
1965 2631 8.609176 TCTTTATGTTCGGTATATGCTTGTTTC 58.391 33.333 0.00 0.00 0.00 2.78
1967 2633 4.247258 TGTTCGGTATATGCTTGTTTCGT 58.753 39.130 0.00 0.00 0.00 3.85
2172 2900 5.870978 AGTGATTGCAATATGTTTTTCTGCC 59.129 36.000 12.97 0.00 31.92 4.85
2216 2944 0.538118 TCACTTATGGTACGGGTGCC 59.462 55.000 0.00 0.00 35.78 5.01
2305 3033 8.804912 AATGGCATTCCTCTAATTATCATCTC 57.195 34.615 6.96 0.00 0.00 2.75
2326 3055 6.892485 TCTCTATTTTCATCAGGAAGCATCA 58.108 36.000 0.00 0.00 36.72 3.07
2362 3091 4.821805 ACAGTGGAGTTTGTAATGTTGGAG 59.178 41.667 0.00 0.00 0.00 3.86
2443 3172 5.829924 ACACAGAATCAGTGACCTTGAAAAT 59.170 36.000 12.74 0.00 40.16 1.82
2726 3493 3.329929 ACACTAAGACCCCTAAAAGCG 57.670 47.619 0.00 0.00 0.00 4.68
2729 3496 4.081807 ACACTAAGACCCCTAAAAGCGTAG 60.082 45.833 0.00 0.00 0.00 3.51
2976 3743 9.239002 CTTTGACTACGAATATTCAGTTCTAGG 57.761 37.037 15.57 0.00 0.00 3.02
3059 3826 5.408909 CCTGTGCATGCAAATTTGATGTTTA 59.591 36.000 24.58 9.94 0.00 2.01
3061 3828 6.832804 TGTGCATGCAAATTTGATGTTTATG 58.167 32.000 24.58 14.28 0.00 1.90
3065 3832 7.148557 TGCATGCAAATTTGATGTTTATGTCTG 60.149 33.333 20.30 3.23 0.00 3.51
3067 3834 8.714179 CATGCAAATTTGATGTTTATGTCTGTT 58.286 29.630 22.31 0.00 0.00 3.16
3069 3836 7.710044 TGCAAATTTGATGTTTATGTCTGTTGT 59.290 29.630 22.31 0.00 0.00 3.32
3128 3895 8.537223 TGTTATAATGCTTCGTTTCGTCTATTC 58.463 33.333 0.00 0.00 0.00 1.75
3130 3897 1.652124 TGCTTCGTTTCGTCTATTCGC 59.348 47.619 0.00 0.00 0.00 4.70
3148 3915 2.492484 TCGCTAGTCTCTTCAAGGGTTC 59.508 50.000 0.00 0.00 0.00 3.62
3157 3924 3.347216 TCTTCAAGGGTTCTGCTAATGC 58.653 45.455 0.00 0.00 40.20 3.56
3158 3925 2.128771 TCAAGGGTTCTGCTAATGCC 57.871 50.000 0.00 0.00 38.71 4.40
3216 3983 3.454375 CCCATAGATGACGTTACCACAC 58.546 50.000 0.00 0.00 0.00 3.82
3231 3998 3.238597 ACCACACATAAGGCAAAATGGT 58.761 40.909 0.00 0.00 34.36 3.55
3296 4063 2.236146 TGATAGTGCCGTGAAGATTGGT 59.764 45.455 0.00 0.00 0.00 3.67
3318 4085 6.650807 TGGTGATCAGACTGTATTGTTTCTTC 59.349 38.462 0.00 0.00 0.00 2.87
3328 4095 5.935945 TGTATTGTTTCTTCCCACTTCAGA 58.064 37.500 0.00 0.00 0.00 3.27
3481 4248 8.237949 TCGAGACTTCATCTTTACTCTGTTAAG 58.762 37.037 0.00 0.00 38.00 1.85
3599 4366 2.832129 TGGATCAGAACACCCAGAGTAC 59.168 50.000 0.00 0.00 0.00 2.73
3620 4387 5.734855 ACGTATTTCCATATTGTCTGTGC 57.265 39.130 0.00 0.00 0.00 4.57
3647 4414 5.541868 TGCATTTTTCCCAGACCATCTTTAA 59.458 36.000 0.00 0.00 0.00 1.52
3736 4503 4.021807 TGTCGTGCAGTTTTCTATGGTCTA 60.022 41.667 0.00 0.00 0.00 2.59
3905 4672 4.398044 CCCCTGTTTTATCGCAATGTAACT 59.602 41.667 0.00 0.00 0.00 2.24
3919 4686 5.227152 CAATGTAACTTAAGGGTTTGTGCC 58.773 41.667 7.53 0.00 0.00 5.01
3924 4691 2.956333 ACTTAAGGGTTTGTGCCTTGTC 59.044 45.455 7.53 0.00 0.00 3.18
3936 4703 0.319405 GCCTTGTCATTGCTTGGCTT 59.681 50.000 0.00 0.00 37.58 4.35
3956 4723 5.417580 GGCTTTGATGGTAGGAACATGTTTA 59.582 40.000 13.36 0.00 0.00 2.01
3957 4724 6.322491 GCTTTGATGGTAGGAACATGTTTAC 58.678 40.000 13.36 11.76 0.00 2.01
3970 4737 2.649331 TGTTTACGCTGTAGAGGCTC 57.351 50.000 6.34 6.34 0.00 4.70
4009 4776 2.818132 CCTCTCCCGGATGTGAGC 59.182 66.667 0.73 0.00 0.00 4.26
4080 4847 7.947890 TGAAACCTCTTTATCAAAGGTATGGTT 59.052 33.333 0.00 0.00 42.58 3.67
4081 4848 8.721133 AAACCTCTTTATCAAAGGTATGGTTT 57.279 30.769 16.52 16.52 42.58 3.27
4270 5060 5.456779 GGTACCTCCTCCTCAGTAATTACT 58.543 45.833 12.50 12.50 36.90 2.24
4271 5061 5.898397 GGTACCTCCTCCTCAGTAATTACTT 59.102 44.000 15.60 0.25 33.46 2.24
4272 5062 6.040729 GGTACCTCCTCCTCAGTAATTACTTC 59.959 46.154 15.60 0.00 33.46 3.01
4273 5063 5.590818 ACCTCCTCCTCAGTAATTACTTCA 58.409 41.667 15.60 4.78 33.46 3.02
4274 5064 5.659079 ACCTCCTCCTCAGTAATTACTTCAG 59.341 44.000 15.60 13.45 33.46 3.02
4275 5065 5.894393 CCTCCTCCTCAGTAATTACTTCAGA 59.106 44.000 15.60 9.30 33.46 3.27
4276 5066 6.381420 CCTCCTCCTCAGTAATTACTTCAGAA 59.619 42.308 15.60 0.00 33.46 3.02
4277 5067 7.411486 TCCTCCTCAGTAATTACTTCAGAAG 57.589 40.000 15.60 8.77 33.46 2.85
4298 5088 9.635520 CAGAAGTTCAAATTTCATAATGCTTCT 57.364 29.630 5.50 0.00 39.30 2.85
4300 5090 8.992835 AAGTTCAAATTTCATAATGCTTCTCC 57.007 30.769 0.00 0.00 0.00 3.71
4303 5093 7.943079 TCAAATTTCATAATGCTTCTCCTGA 57.057 32.000 0.00 0.00 0.00 3.86
4304 5094 8.529424 TCAAATTTCATAATGCTTCTCCTGAT 57.471 30.769 0.00 0.00 0.00 2.90
4306 5096 9.674824 CAAATTTCATAATGCTTCTCCTGATAC 57.325 33.333 0.00 0.00 0.00 2.24
4307 5097 9.638176 AAATTTCATAATGCTTCTCCTGATACT 57.362 29.630 0.00 0.00 0.00 2.12
4311 5101 6.327365 TCATAATGCTTCTCCTGATACTCCAA 59.673 38.462 0.00 0.00 0.00 3.53
4312 5102 3.895232 TGCTTCTCCTGATACTCCAAC 57.105 47.619 0.00 0.00 0.00 3.77
4313 5103 2.501723 TGCTTCTCCTGATACTCCAACC 59.498 50.000 0.00 0.00 0.00 3.77
4314 5104 2.769095 GCTTCTCCTGATACTCCAACCT 59.231 50.000 0.00 0.00 0.00 3.50
4315 5105 3.961408 GCTTCTCCTGATACTCCAACCTA 59.039 47.826 0.00 0.00 0.00 3.08
4316 5106 4.591072 GCTTCTCCTGATACTCCAACCTAT 59.409 45.833 0.00 0.00 0.00 2.57
4317 5107 5.510520 GCTTCTCCTGATACTCCAACCTATG 60.511 48.000 0.00 0.00 0.00 2.23
4318 5108 3.898123 TCTCCTGATACTCCAACCTATGC 59.102 47.826 0.00 0.00 0.00 3.14
4319 5109 3.900601 CTCCTGATACTCCAACCTATGCT 59.099 47.826 0.00 0.00 0.00 3.79
4320 5110 4.298626 TCCTGATACTCCAACCTATGCTT 58.701 43.478 0.00 0.00 0.00 3.91
4321 5111 4.721776 TCCTGATACTCCAACCTATGCTTT 59.278 41.667 0.00 0.00 0.00 3.51
4322 5112 5.059833 CCTGATACTCCAACCTATGCTTTC 58.940 45.833 0.00 0.00 0.00 2.62
4323 5113 5.396772 CCTGATACTCCAACCTATGCTTTCA 60.397 44.000 0.00 0.00 0.00 2.69
4324 5114 5.674525 TGATACTCCAACCTATGCTTTCAG 58.325 41.667 0.00 0.00 0.00 3.02
4325 5115 5.425217 TGATACTCCAACCTATGCTTTCAGA 59.575 40.000 0.00 0.00 0.00 3.27
4326 5116 4.213564 ACTCCAACCTATGCTTTCAGAG 57.786 45.455 0.00 0.00 0.00 3.35
4327 5117 3.840666 ACTCCAACCTATGCTTTCAGAGA 59.159 43.478 0.00 0.00 33.52 3.10
4328 5118 4.187694 CTCCAACCTATGCTTTCAGAGAC 58.812 47.826 0.00 0.00 33.52 3.36
4329 5119 3.840666 TCCAACCTATGCTTTCAGAGACT 59.159 43.478 0.00 0.00 33.52 3.24
4330 5120 5.023452 TCCAACCTATGCTTTCAGAGACTA 58.977 41.667 0.00 0.00 33.52 2.59
4331 5121 5.105310 TCCAACCTATGCTTTCAGAGACTAC 60.105 44.000 0.00 0.00 33.52 2.73
4332 5122 5.105146 CCAACCTATGCTTTCAGAGACTACT 60.105 44.000 0.00 0.00 33.52 2.57
4333 5123 6.096987 CCAACCTATGCTTTCAGAGACTACTA 59.903 42.308 0.00 0.00 33.52 1.82
4346 5136 9.915629 TTCAGAGACTACTATTTTGAGTTCTTC 57.084 33.333 0.00 0.00 0.00 2.87
4347 5137 9.303116 TCAGAGACTACTATTTTGAGTTCTTCT 57.697 33.333 0.00 0.00 0.00 2.85
4382 5172 2.103373 CTGGCTGGCTACTAAGAGACA 58.897 52.381 2.00 0.00 32.02 3.41
4389 5179 7.893833 TGGCTGGCTACTAAGAGACAATATATA 59.106 37.037 2.00 0.00 32.76 0.86
4432 5242 4.046286 ACCTCATTTGGCAGGTCAATTA 57.954 40.909 0.00 0.00 38.83 1.40
4460 5270 3.154710 CCTATGCTGTGAATGATGCCAT 58.845 45.455 0.00 0.00 33.66 4.40
4464 5274 1.961394 GCTGTGAATGATGCCATCCAT 59.039 47.619 1.49 0.00 36.70 3.41
4479 5289 3.564644 CCATCCATCTTGACTCATTCAGC 59.435 47.826 0.00 0.00 34.94 4.26
4590 5400 3.295273 AGCGAGCCACAGACGACA 61.295 61.111 0.00 0.00 0.00 4.35
4641 5478 4.479993 CCGAGCCAGCCCAAGGAG 62.480 72.222 0.00 0.00 0.00 3.69
4642 5479 3.393970 CGAGCCAGCCCAAGGAGA 61.394 66.667 0.00 0.00 0.00 3.71
4643 5480 2.588989 GAGCCAGCCCAAGGAGAG 59.411 66.667 0.00 0.00 0.00 3.20
4644 5481 3.013932 AGCCAGCCCAAGGAGAGG 61.014 66.667 0.00 0.00 0.00 3.69
4645 5482 3.011517 GCCAGCCCAAGGAGAGGA 61.012 66.667 0.00 0.00 0.00 3.71
4646 5483 2.606587 GCCAGCCCAAGGAGAGGAA 61.607 63.158 0.00 0.00 0.00 3.36
4647 5484 1.606531 CCAGCCCAAGGAGAGGAAG 59.393 63.158 0.00 0.00 0.00 3.46
4648 5485 1.077858 CAGCCCAAGGAGAGGAAGC 60.078 63.158 0.00 0.00 0.00 3.86
4649 5486 1.229788 AGCCCAAGGAGAGGAAGCT 60.230 57.895 0.00 0.00 0.00 3.74
4650 5487 1.223211 GCCCAAGGAGAGGAAGCTC 59.777 63.158 0.00 0.00 0.00 4.09
4676 5513 1.849823 AGCAGCCCAAGGAGAAGGT 60.850 57.895 0.00 0.00 0.00 3.50
4765 5602 2.041265 TCTCCTCTTCCAGGGCCC 59.959 66.667 16.46 16.46 43.67 5.80
4766 5603 2.285668 CTCCTCTTCCAGGGCCCA 60.286 66.667 27.56 0.00 43.67 5.36
4785 5622 2.850851 AATTCCCCAGGCCTCCGGTA 62.851 60.000 0.00 0.00 0.00 4.02
4790 5627 1.843376 CCAGGCCTCCGGTATCCAT 60.843 63.158 0.00 0.00 0.00 3.41
4794 5631 1.451936 GCCTCCGGTATCCATGCTT 59.548 57.895 0.00 0.00 0.00 3.91
4797 5634 0.035458 CTCCGGTATCCATGCTTCCC 59.965 60.000 0.00 0.00 0.00 3.97
4830 5667 1.248486 CACTGGACGAGAAGACCTCA 58.752 55.000 0.00 0.00 42.06 3.86
4954 5791 2.147387 ACACAGGGGAAGAAGCCGT 61.147 57.895 0.00 0.00 0.00 5.68
5095 5934 7.763356 TCTACTTCACTAGTTACTTCATGAGC 58.237 38.462 0.00 0.00 38.33 4.26
5096 5935 6.346477 ACTTCACTAGTTACTTCATGAGCA 57.654 37.500 0.00 0.00 31.29 4.26
5097 5936 6.159988 ACTTCACTAGTTACTTCATGAGCAC 58.840 40.000 0.00 0.00 31.29 4.40
5098 5937 5.722021 TCACTAGTTACTTCATGAGCACA 57.278 39.130 0.00 0.00 0.00 4.57
5099 5938 6.286240 TCACTAGTTACTTCATGAGCACAT 57.714 37.500 0.00 0.00 37.19 3.21
5100 5939 6.333416 TCACTAGTTACTTCATGAGCACATC 58.667 40.000 0.00 0.00 34.15 3.06
5101 5940 6.153510 TCACTAGTTACTTCATGAGCACATCT 59.846 38.462 0.00 0.00 34.15 2.90
5102 5941 7.339466 TCACTAGTTACTTCATGAGCACATCTA 59.661 37.037 0.00 0.00 34.15 1.98
5103 5942 7.647318 CACTAGTTACTTCATGAGCACATCTAG 59.353 40.741 14.99 14.99 34.15 2.43
5104 5943 6.537453 AGTTACTTCATGAGCACATCTAGT 57.463 37.500 10.90 10.90 34.15 2.57
5118 5957 6.104439 CACATCTAGTGCAAAGATCTCAAC 57.896 41.667 9.35 0.00 42.15 3.18
5119 5958 5.640783 CACATCTAGTGCAAAGATCTCAACA 59.359 40.000 9.35 0.00 42.15 3.33
5120 5959 5.641209 ACATCTAGTGCAAAGATCTCAACAC 59.359 40.000 9.35 11.91 31.22 3.32
5121 5960 5.213891 TCTAGTGCAAAGATCTCAACACA 57.786 39.130 18.63 3.21 0.00 3.72
5122 5961 5.798132 TCTAGTGCAAAGATCTCAACACAT 58.202 37.500 18.63 9.95 0.00 3.21
5123 5962 6.233434 TCTAGTGCAAAGATCTCAACACATT 58.767 36.000 18.63 6.77 0.00 2.71
5124 5963 5.779529 AGTGCAAAGATCTCAACACATTT 57.220 34.783 18.63 0.00 0.00 2.32
5125 5964 6.152932 AGTGCAAAGATCTCAACACATTTT 57.847 33.333 18.63 0.00 0.00 1.82
5126 5965 6.576185 AGTGCAAAGATCTCAACACATTTTT 58.424 32.000 18.63 1.68 0.00 1.94
5127 5966 6.477688 AGTGCAAAGATCTCAACACATTTTTG 59.522 34.615 18.63 7.96 30.76 2.44
5128 5967 6.256321 GTGCAAAGATCTCAACACATTTTTGT 59.744 34.615 13.97 0.00 30.44 2.83
5129 5968 6.817641 TGCAAAGATCTCAACACATTTTTGTT 59.182 30.769 0.00 0.00 40.46 2.83
5130 5969 7.010367 TGCAAAGATCTCAACACATTTTTGTTC 59.990 33.333 0.00 0.00 37.62 3.18
5131 5970 7.223387 GCAAAGATCTCAACACATTTTTGTTCT 59.777 33.333 0.00 0.00 37.62 3.01
5132 5971 8.749499 CAAAGATCTCAACACATTTTTGTTCTC 58.251 33.333 0.00 0.00 37.62 2.87
5133 5972 7.572523 AGATCTCAACACATTTTTGTTCTCA 57.427 32.000 0.00 0.00 37.62 3.27
5134 5973 7.999679 AGATCTCAACACATTTTTGTTCTCAA 58.000 30.769 0.00 0.00 37.62 3.02
5135 5974 8.133627 AGATCTCAACACATTTTTGTTCTCAAG 58.866 33.333 0.00 0.00 37.62 3.02
5136 5975 7.156876 TCTCAACACATTTTTGTTCTCAAGT 57.843 32.000 0.00 0.00 37.62 3.16
5137 5976 7.028962 TCTCAACACATTTTTGTTCTCAAGTG 58.971 34.615 0.00 0.00 37.62 3.16
5138 5977 6.686630 TCAACACATTTTTGTTCTCAAGTGT 58.313 32.000 0.00 0.00 39.31 3.55
5139 5978 7.821652 TCAACACATTTTTGTTCTCAAGTGTA 58.178 30.769 0.00 0.00 37.86 2.90
5140 5979 8.300286 TCAACACATTTTTGTTCTCAAGTGTAA 58.700 29.630 0.00 0.00 37.86 2.41
5141 5980 8.920665 CAACACATTTTTGTTCTCAAGTGTAAA 58.079 29.630 0.00 0.00 37.86 2.01
5142 5981 9.651913 AACACATTTTTGTTCTCAAGTGTAAAT 57.348 25.926 0.00 0.00 37.86 1.40
5149 5988 9.677567 TTTTGTTCTCAAGTGTAAATATGAAGC 57.322 29.630 0.00 0.00 34.88 3.86
5150 5989 8.621532 TTGTTCTCAAGTGTAAATATGAAGCT 57.378 30.769 0.00 0.00 0.00 3.74
5151 5990 8.256611 TGTTCTCAAGTGTAAATATGAAGCTC 57.743 34.615 0.00 0.00 0.00 4.09
5152 5991 7.063426 TGTTCTCAAGTGTAAATATGAAGCTCG 59.937 37.037 0.00 0.00 0.00 5.03
5153 5992 6.863275 TCTCAAGTGTAAATATGAAGCTCGA 58.137 36.000 0.00 0.00 0.00 4.04
5154 5993 6.752351 TCTCAAGTGTAAATATGAAGCTCGAC 59.248 38.462 0.00 0.00 0.00 4.20
5155 5994 6.394809 TCAAGTGTAAATATGAAGCTCGACA 58.605 36.000 0.00 0.00 0.00 4.35
5156 5995 6.871492 TCAAGTGTAAATATGAAGCTCGACAA 59.129 34.615 0.00 0.00 0.00 3.18
5157 5996 7.549134 TCAAGTGTAAATATGAAGCTCGACAAT 59.451 33.333 0.00 0.00 0.00 2.71
5158 5997 7.239166 AGTGTAAATATGAAGCTCGACAATG 57.761 36.000 0.00 0.00 0.00 2.82
5159 5998 6.818644 AGTGTAAATATGAAGCTCGACAATGT 59.181 34.615 0.00 0.00 0.00 2.71
5160 5999 6.901887 GTGTAAATATGAAGCTCGACAATGTG 59.098 38.462 0.00 0.00 0.00 3.21
5161 6000 6.593770 TGTAAATATGAAGCTCGACAATGTGT 59.406 34.615 0.00 0.00 0.00 3.72
5162 6001 6.500684 AAATATGAAGCTCGACAATGTGTT 57.499 33.333 0.00 0.00 0.00 3.32
5163 6002 7.609760 AAATATGAAGCTCGACAATGTGTTA 57.390 32.000 0.00 0.00 0.00 2.41
5164 6003 7.792374 AATATGAAGCTCGACAATGTGTTAT 57.208 32.000 0.00 0.00 0.00 1.89
5165 6004 8.887036 AATATGAAGCTCGACAATGTGTTATA 57.113 30.769 0.00 0.00 0.00 0.98
5166 6005 9.494271 AATATGAAGCTCGACAATGTGTTATAT 57.506 29.630 0.00 0.00 0.00 0.86
5167 6006 6.828502 TGAAGCTCGACAATGTGTTATATC 57.171 37.500 0.00 0.00 0.00 1.63
5168 6007 6.337356 TGAAGCTCGACAATGTGTTATATCA 58.663 36.000 0.00 0.00 0.00 2.15
5169 6008 6.255670 TGAAGCTCGACAATGTGTTATATCAC 59.744 38.462 6.94 6.94 38.63 3.06
5181 6020 7.821595 TGTGTTATATCACAAAACTACCGAG 57.178 36.000 13.10 0.00 43.92 4.63
5182 6021 7.604549 TGTGTTATATCACAAAACTACCGAGA 58.395 34.615 13.10 0.00 43.92 4.04
5183 6022 8.255206 TGTGTTATATCACAAAACTACCGAGAT 58.745 33.333 13.10 0.00 43.92 2.75
5184 6023 8.753175 GTGTTATATCACAAAACTACCGAGATC 58.247 37.037 8.73 0.00 38.12 2.75
5185 6024 8.471609 TGTTATATCACAAAACTACCGAGATCA 58.528 33.333 0.00 0.00 0.00 2.92
5186 6025 9.309516 GTTATATCACAAAACTACCGAGATCAA 57.690 33.333 0.00 0.00 0.00 2.57
5187 6026 9.878667 TTATATCACAAAACTACCGAGATCAAA 57.121 29.630 0.00 0.00 0.00 2.69
5188 6027 5.917541 TCACAAAACTACCGAGATCAAAC 57.082 39.130 0.00 0.00 0.00 2.93
5189 6028 5.361427 TCACAAAACTACCGAGATCAAACA 58.639 37.500 0.00 0.00 0.00 2.83
5190 6029 5.818336 TCACAAAACTACCGAGATCAAACAA 59.182 36.000 0.00 0.00 0.00 2.83
5191 6030 5.907391 CACAAAACTACCGAGATCAAACAAC 59.093 40.000 0.00 0.00 0.00 3.32
5192 6031 5.587043 ACAAAACTACCGAGATCAAACAACA 59.413 36.000 0.00 0.00 0.00 3.33
5193 6032 6.262273 ACAAAACTACCGAGATCAAACAACAT 59.738 34.615 0.00 0.00 0.00 2.71
5194 6033 6.877611 AAACTACCGAGATCAAACAACATT 57.122 33.333 0.00 0.00 0.00 2.71
5195 6034 6.481954 AACTACCGAGATCAAACAACATTC 57.518 37.500 0.00 0.00 0.00 2.67
5196 6035 5.547465 ACTACCGAGATCAAACAACATTCA 58.453 37.500 0.00 0.00 0.00 2.57
5197 6036 5.639506 ACTACCGAGATCAAACAACATTCAG 59.360 40.000 0.00 0.00 0.00 3.02
5198 6037 4.641396 ACCGAGATCAAACAACATTCAGA 58.359 39.130 0.00 0.00 0.00 3.27
5199 6038 5.248640 ACCGAGATCAAACAACATTCAGAT 58.751 37.500 0.00 0.00 0.00 2.90
5200 6039 6.406370 ACCGAGATCAAACAACATTCAGATA 58.594 36.000 0.00 0.00 0.00 1.98
5201 6040 6.878923 ACCGAGATCAAACAACATTCAGATAA 59.121 34.615 0.00 0.00 0.00 1.75
5202 6041 7.554118 ACCGAGATCAAACAACATTCAGATAAT 59.446 33.333 0.00 0.00 0.00 1.28
5203 6042 9.045223 CCGAGATCAAACAACATTCAGATAATA 57.955 33.333 0.00 0.00 0.00 0.98
5204 6043 9.855361 CGAGATCAAACAACATTCAGATAATAC 57.145 33.333 0.00 0.00 0.00 1.89
5213 6052 9.770097 ACAACATTCAGATAATACATAGACCAG 57.230 33.333 0.00 0.00 0.00 4.00
5214 6053 8.715998 CAACATTCAGATAATACATAGACCAGC 58.284 37.037 0.00 0.00 0.00 4.85
5215 6054 7.966812 ACATTCAGATAATACATAGACCAGCA 58.033 34.615 0.00 0.00 0.00 4.41
5216 6055 8.093307 ACATTCAGATAATACATAGACCAGCAG 58.907 37.037 0.00 0.00 0.00 4.24
5217 6056 6.030548 TCAGATAATACATAGACCAGCAGC 57.969 41.667 0.00 0.00 0.00 5.25
5218 6057 5.777223 TCAGATAATACATAGACCAGCAGCT 59.223 40.000 0.00 0.00 0.00 4.24
5219 6058 6.071672 TCAGATAATACATAGACCAGCAGCTC 60.072 42.308 0.00 0.00 0.00 4.09
5220 6059 3.760580 AATACATAGACCAGCAGCTCC 57.239 47.619 0.00 0.00 0.00 4.70
5221 6060 2.461300 TACATAGACCAGCAGCTCCT 57.539 50.000 0.00 0.00 0.00 3.69
5222 6061 2.461300 ACATAGACCAGCAGCTCCTA 57.539 50.000 0.00 0.00 0.00 2.94
5223 6062 2.315176 ACATAGACCAGCAGCTCCTAG 58.685 52.381 0.00 0.00 0.00 3.02
5224 6063 2.091610 ACATAGACCAGCAGCTCCTAGA 60.092 50.000 0.00 0.00 0.00 2.43
5225 6064 2.356665 TAGACCAGCAGCTCCTAGAG 57.643 55.000 0.00 0.00 0.00 2.43
5226 6065 0.628522 AGACCAGCAGCTCCTAGAGA 59.371 55.000 0.00 0.00 0.00 3.10
5227 6066 1.032014 GACCAGCAGCTCCTAGAGAG 58.968 60.000 0.00 0.00 46.29 3.20
5228 6067 0.334676 ACCAGCAGCTCCTAGAGAGT 59.665 55.000 0.00 0.00 45.21 3.24
5229 6068 1.566703 ACCAGCAGCTCCTAGAGAGTA 59.433 52.381 0.00 0.00 45.21 2.59
5230 6069 2.229792 CCAGCAGCTCCTAGAGAGTAG 58.770 57.143 0.00 4.74 45.21 2.57
5231 6070 2.158682 CCAGCAGCTCCTAGAGAGTAGA 60.159 54.545 0.00 0.00 45.21 2.59
5232 6071 2.878406 CAGCAGCTCCTAGAGAGTAGAC 59.122 54.545 0.00 0.17 45.21 2.59
5233 6072 2.507886 AGCAGCTCCTAGAGAGTAGACA 59.492 50.000 9.20 0.00 45.21 3.41
5234 6073 2.616842 GCAGCTCCTAGAGAGTAGACAC 59.383 54.545 9.20 0.00 45.21 3.67
5235 6074 3.684413 GCAGCTCCTAGAGAGTAGACACT 60.684 52.174 9.20 0.00 45.21 3.55
5236 6075 3.876914 CAGCTCCTAGAGAGTAGACACTG 59.123 52.174 9.20 4.49 45.21 3.66
5237 6076 3.778075 AGCTCCTAGAGAGTAGACACTGA 59.222 47.826 9.20 0.00 45.21 3.41
5238 6077 4.226394 AGCTCCTAGAGAGTAGACACTGAA 59.774 45.833 9.20 0.00 45.21 3.02
5239 6078 4.334481 GCTCCTAGAGAGTAGACACTGAAC 59.666 50.000 9.20 0.00 45.21 3.18
5240 6079 4.505808 TCCTAGAGAGTAGACACTGAACG 58.494 47.826 0.00 0.00 34.21 3.95
5241 6080 4.020396 TCCTAGAGAGTAGACACTGAACGT 60.020 45.833 0.00 0.00 34.21 3.99
5242 6081 4.696402 CCTAGAGAGTAGACACTGAACGTT 59.304 45.833 0.00 0.00 34.21 3.99
5243 6082 4.491234 AGAGAGTAGACACTGAACGTTG 57.509 45.455 5.00 0.00 34.21 4.10
5244 6083 2.981140 GAGAGTAGACACTGAACGTTGC 59.019 50.000 5.00 0.00 34.21 4.17
5245 6084 2.623889 AGAGTAGACACTGAACGTTGCT 59.376 45.455 5.00 0.00 34.21 3.91
5246 6085 2.981140 GAGTAGACACTGAACGTTGCTC 59.019 50.000 5.00 0.00 34.21 4.26
5247 6086 1.714460 GTAGACACTGAACGTTGCTCG 59.286 52.381 5.00 0.00 46.00 5.03
5248 6087 1.201825 GACACTGAACGTTGCTCGC 59.798 57.895 5.00 0.00 44.19 5.03
5249 6088 1.215655 GACACTGAACGTTGCTCGCT 61.216 55.000 5.00 0.00 44.19 4.93
5250 6089 0.031585 ACACTGAACGTTGCTCGCTA 59.968 50.000 5.00 0.00 44.19 4.26
5251 6090 1.136690 CACTGAACGTTGCTCGCTAA 58.863 50.000 5.00 0.00 44.19 3.09
5252 6091 1.525197 CACTGAACGTTGCTCGCTAAA 59.475 47.619 5.00 0.00 44.19 1.85
5253 6092 1.525619 ACTGAACGTTGCTCGCTAAAC 59.474 47.619 5.00 0.00 44.19 2.01
5254 6093 1.792949 CTGAACGTTGCTCGCTAAACT 59.207 47.619 5.00 0.00 44.19 2.66
5255 6094 1.790623 TGAACGTTGCTCGCTAAACTC 59.209 47.619 5.00 0.00 44.19 3.01
5256 6095 1.790623 GAACGTTGCTCGCTAAACTCA 59.209 47.619 5.00 0.00 44.19 3.41
5257 6096 1.419374 ACGTTGCTCGCTAAACTCAG 58.581 50.000 2.18 0.00 44.19 3.35
5258 6097 1.000607 ACGTTGCTCGCTAAACTCAGA 60.001 47.619 2.18 0.00 44.19 3.27
5259 6098 1.387084 CGTTGCTCGCTAAACTCAGAC 59.613 52.381 0.00 0.00 0.00 3.51
5260 6099 2.404215 GTTGCTCGCTAAACTCAGACA 58.596 47.619 0.00 0.00 0.00 3.41
5261 6100 2.996621 GTTGCTCGCTAAACTCAGACAT 59.003 45.455 0.00 0.00 0.00 3.06
5262 6101 2.610433 TGCTCGCTAAACTCAGACATG 58.390 47.619 0.00 0.00 0.00 3.21
5263 6102 2.029020 TGCTCGCTAAACTCAGACATGT 60.029 45.455 0.00 0.00 0.00 3.21
5264 6103 2.600867 GCTCGCTAAACTCAGACATGTC 59.399 50.000 18.47 18.47 0.00 3.06
5265 6104 3.674682 GCTCGCTAAACTCAGACATGTCT 60.675 47.826 22.89 22.89 41.37 3.41
5266 6105 4.438880 GCTCGCTAAACTCAGACATGTCTA 60.439 45.833 27.44 14.76 37.98 2.59
5267 6106 5.734786 GCTCGCTAAACTCAGACATGTCTAT 60.735 44.000 27.44 13.60 37.98 1.98
5268 6107 6.208988 TCGCTAAACTCAGACATGTCTATT 57.791 37.500 27.44 20.10 37.98 1.73
5269 6108 6.631016 TCGCTAAACTCAGACATGTCTATTT 58.369 36.000 27.44 25.39 37.98 1.40
5270 6109 7.768240 TCGCTAAACTCAGACATGTCTATTTA 58.232 34.615 27.44 25.20 37.98 1.40
5271 6110 8.414003 TCGCTAAACTCAGACATGTCTATTTAT 58.586 33.333 27.44 15.94 37.98 1.40
5272 6111 9.678941 CGCTAAACTCAGACATGTCTATTTATA 57.321 33.333 27.44 16.18 37.98 0.98
5286 6125 8.648557 TGTCTATTTATAGTTCATGAGTGTGC 57.351 34.615 0.00 0.00 0.00 4.57
5287 6126 8.257306 TGTCTATTTATAGTTCATGAGTGTGCA 58.743 33.333 0.00 0.00 0.00 4.57
5290 6129 9.486497 CTATTTATAGTTCATGAGTGTGCATCT 57.514 33.333 0.00 0.00 0.00 2.90
5293 6132 4.283363 AGTTCATGAGTGTGCATCTTCT 57.717 40.909 0.00 0.00 0.00 2.85
5298 6137 2.964740 TGAGTGTGCATCTTCTAGTGC 58.035 47.619 0.00 0.00 41.61 4.40
5305 6144 2.012673 GCATCTTCTAGTGCAACCCTG 58.987 52.381 0.00 0.00 40.94 4.45
5311 6150 1.281867 TCTAGTGCAACCCTGGAATGG 59.718 52.381 0.00 0.00 37.80 3.16
5314 6153 1.173913 GTGCAACCCTGGAATGGTAC 58.826 55.000 0.00 0.00 31.77 3.34
5326 6165 4.832248 TGGAATGGTACTCTCAACATGTC 58.168 43.478 0.00 0.00 0.00 3.06
5329 6168 5.352569 GGAATGGTACTCTCAACATGTCTTG 59.647 44.000 0.00 0.00 0.00 3.02
5330 6169 4.955811 TGGTACTCTCAACATGTCTTGT 57.044 40.909 0.00 0.00 41.53 3.16
5332 6171 5.297547 TGGTACTCTCAACATGTCTTGTTC 58.702 41.667 0.00 0.00 45.55 3.18
5333 6172 5.070446 TGGTACTCTCAACATGTCTTGTTCT 59.930 40.000 0.00 0.00 45.55 3.01
5334 6173 5.635700 GGTACTCTCAACATGTCTTGTTCTC 59.364 44.000 0.00 0.00 45.55 2.87
5355 6198 7.525688 TCTCAATTGTAAATACGAAGCTCAG 57.474 36.000 5.13 0.00 0.00 3.35
5406 6249 4.914983 ACCACTGACATCAACATTCAGAT 58.085 39.130 4.88 0.00 39.36 2.90
5409 6252 6.372659 ACCACTGACATCAACATTCAGATAAC 59.627 38.462 4.88 0.00 39.36 1.89
5411 6254 7.066645 CCACTGACATCAACATTCAGATAACAT 59.933 37.037 4.88 0.00 39.36 2.71
5413 6256 9.102757 ACTGACATCAACATTCAGATAACATAC 57.897 33.333 4.88 0.00 39.36 2.39
5417 6260 9.102757 ACATCAACATTCAGATAACATACAGAC 57.897 33.333 0.00 0.00 0.00 3.51
5427 6270 7.118245 TCAGATAACATACAGACAAACAGCTTG 59.882 37.037 0.00 0.00 41.19 4.01
5437 6280 3.387397 ACAAACAGCTTGTACCGAGTAC 58.613 45.455 7.11 7.11 46.75 2.73
5438 6281 2.735134 CAAACAGCTTGTACCGAGTACC 59.265 50.000 10.45 0.00 38.14 3.34
5515 6358 5.450818 AGAAATCAGCTGGGGTACAAATA 57.549 39.130 15.13 0.00 0.00 1.40
5525 6368 1.483415 GGGTACAAATAGCCCTCGACA 59.517 52.381 0.00 0.00 42.31 4.35
5778 6628 4.869440 CCGCTCCTCAGCTGCTCG 62.869 72.222 9.47 7.32 44.40 5.03
5838 6688 0.458543 CGACGTGAGACATCCTTGGG 60.459 60.000 0.00 0.00 0.00 4.12
5928 6778 1.014044 GCAAGTCGTTGATGAGCGGA 61.014 55.000 0.00 0.00 35.46 5.54
6015 6865 1.609061 CCAGCAGATTCAACGGACTGT 60.609 52.381 0.00 0.00 33.57 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 0.957888 GAGTTCTCCTTGTGGCTGGC 60.958 60.000 0.00 0.00 0.00 4.85
349 350 6.183360 ACAGACCACACACATAGCTTCTATAG 60.183 42.308 0.00 0.00 0.00 1.31
351 352 4.467795 ACAGACCACACACATAGCTTCTAT 59.532 41.667 0.00 0.00 0.00 1.98
402 411 7.880713 TGTAAAGCATATATCGCCAAGGATTAA 59.119 33.333 0.00 0.00 0.00 1.40
414 423 6.293004 AGGAGCCTCTGTAAAGCATATATC 57.707 41.667 0.00 0.00 0.00 1.63
437 446 8.205512 TGTTAAGTGACCACAAGATAACAGTTA 58.794 33.333 2.78 0.00 32.37 2.24
448 457 5.003160 CCTGATGATGTTAAGTGACCACAA 58.997 41.667 2.78 0.00 0.00 3.33
483 497 2.083774 GCCTGAATTCGTCACATCCAA 58.916 47.619 0.04 0.00 31.13 3.53
493 507 7.306632 CCGAACTAAACTATAAGCCTGAATTCG 60.307 40.741 0.04 0.00 34.15 3.34
517 531 2.607411 TACATCACATGGCTGCCCCG 62.607 60.000 17.53 9.64 35.87 5.73
539 558 2.885894 GGACGGAGGGAGTAGTATCTTG 59.114 54.545 0.00 0.00 0.00 3.02
549 568 4.161754 ACAAGTATTTTAGGACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
550 569 4.098894 ACAAGTATTTTAGGACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
551 570 4.439968 GACAAGTATTTTAGGACGGAGGG 58.560 47.826 0.00 0.00 0.00 4.30
552 571 4.110482 CGACAAGTATTTTAGGACGGAGG 58.890 47.826 0.00 0.00 0.00 4.30
553 572 4.110482 CCGACAAGTATTTTAGGACGGAG 58.890 47.826 0.00 0.00 40.16 4.63
554 573 3.763360 TCCGACAAGTATTTTAGGACGGA 59.237 43.478 0.00 0.00 43.35 4.69
555 574 4.110482 CTCCGACAAGTATTTTAGGACGG 58.890 47.826 0.00 0.00 39.30 4.79
556 575 4.110482 CCTCCGACAAGTATTTTAGGACG 58.890 47.826 0.00 0.00 0.00 4.79
557 576 5.334724 TCCTCCGACAAGTATTTTAGGAC 57.665 43.478 0.00 0.00 0.00 3.85
558 577 6.346096 CATTCCTCCGACAAGTATTTTAGGA 58.654 40.000 0.00 0.00 0.00 2.94
559 578 5.527582 CCATTCCTCCGACAAGTATTTTAGG 59.472 44.000 0.00 0.00 0.00 2.69
560 579 6.346096 TCCATTCCTCCGACAAGTATTTTAG 58.654 40.000 0.00 0.00 0.00 1.85
561 580 6.302535 TCCATTCCTCCGACAAGTATTTTA 57.697 37.500 0.00 0.00 0.00 1.52
562 581 5.174037 TCCATTCCTCCGACAAGTATTTT 57.826 39.130 0.00 0.00 0.00 1.82
563 582 4.837093 TCCATTCCTCCGACAAGTATTT 57.163 40.909 0.00 0.00 0.00 1.40
564 583 4.164221 ACATCCATTCCTCCGACAAGTATT 59.836 41.667 0.00 0.00 0.00 1.89
565 584 3.711704 ACATCCATTCCTCCGACAAGTAT 59.288 43.478 0.00 0.00 0.00 2.12
566 585 3.104512 ACATCCATTCCTCCGACAAGTA 58.895 45.455 0.00 0.00 0.00 2.24
567 586 1.909302 ACATCCATTCCTCCGACAAGT 59.091 47.619 0.00 0.00 0.00 3.16
568 587 2.698855 ACATCCATTCCTCCGACAAG 57.301 50.000 0.00 0.00 0.00 3.16
569 588 3.967326 AGATACATCCATTCCTCCGACAA 59.033 43.478 0.00 0.00 0.00 3.18
570 589 3.576861 AGATACATCCATTCCTCCGACA 58.423 45.455 0.00 0.00 0.00 4.35
571 590 5.010933 TCTAGATACATCCATTCCTCCGAC 58.989 45.833 0.00 0.00 0.00 4.79
572 591 5.256806 TCTAGATACATCCATTCCTCCGA 57.743 43.478 0.00 0.00 0.00 4.55
573 592 5.680922 GCATCTAGATACATCCATTCCTCCG 60.681 48.000 4.54 0.00 0.00 4.63
574 593 5.188555 TGCATCTAGATACATCCATTCCTCC 59.811 44.000 4.54 0.00 0.00 4.30
575 594 6.291648 TGCATCTAGATACATCCATTCCTC 57.708 41.667 4.54 0.00 0.00 3.71
576 595 6.692849 TTGCATCTAGATACATCCATTCCT 57.307 37.500 4.54 0.00 0.00 3.36
577 596 8.481314 TCTATTGCATCTAGATACATCCATTCC 58.519 37.037 4.54 0.00 0.00 3.01
579 598 9.833917 CATCTATTGCATCTAGATACATCCATT 57.166 33.333 15.31 0.00 34.84 3.16
580 599 9.210228 TCATCTATTGCATCTAGATACATCCAT 57.790 33.333 15.31 0.00 34.84 3.41
581 600 8.599624 TCATCTATTGCATCTAGATACATCCA 57.400 34.615 15.31 0.00 34.84 3.41
582 601 9.478768 CATCATCTATTGCATCTAGATACATCC 57.521 37.037 15.31 0.00 34.84 3.51
583 602 8.980610 GCATCATCTATTGCATCTAGATACATC 58.019 37.037 15.31 0.00 38.72 3.06
584 603 8.706521 AGCATCATCTATTGCATCTAGATACAT 58.293 33.333 15.31 9.92 41.35 2.29
585 604 8.075761 AGCATCATCTATTGCATCTAGATACA 57.924 34.615 15.31 2.76 41.35 2.29
588 607 8.760735 AGTTAGCATCATCTATTGCATCTAGAT 58.239 33.333 11.62 11.62 41.35 1.98
589 608 8.033626 CAGTTAGCATCATCTATTGCATCTAGA 58.966 37.037 8.49 8.49 41.35 2.43
590 609 7.201539 GCAGTTAGCATCATCTATTGCATCTAG 60.202 40.741 0.00 0.00 44.79 2.43
591 610 6.592994 GCAGTTAGCATCATCTATTGCATCTA 59.407 38.462 0.00 0.00 44.79 1.98
592 611 5.411977 GCAGTTAGCATCATCTATTGCATCT 59.588 40.000 0.00 0.00 44.79 2.90
593 612 5.629097 GCAGTTAGCATCATCTATTGCATC 58.371 41.667 0.00 0.00 44.79 3.91
594 613 5.624344 GCAGTTAGCATCATCTATTGCAT 57.376 39.130 0.00 0.00 44.79 3.96
646 669 9.070179 CCAAGTTGTATGGATTCATCATTCATA 57.930 33.333 1.45 0.00 40.56 2.15
647 670 7.781219 TCCAAGTTGTATGGATTCATCATTCAT 59.219 33.333 1.45 0.00 41.98 2.57
716 754 1.190323 GAGCGAACACAAAGACAGACG 59.810 52.381 0.00 0.00 0.00 4.18
733 771 5.510674 CGACATGATTTGAATTCAACTGAGC 59.489 40.000 20.35 9.75 35.28 4.26
739 777 4.650985 CGCTCGACATGATTTGAATTCAA 58.349 39.130 16.91 16.91 0.00 2.69
759 797 3.262686 GGATTCGAACGGGAGCGC 61.263 66.667 0.00 0.00 0.00 5.92
852 892 0.532862 CTGAAACGGGACACAGCAGT 60.533 55.000 0.00 0.00 0.00 4.40
853 893 0.532862 ACTGAAACGGGACACAGCAG 60.533 55.000 0.00 0.00 34.25 4.24
880 924 4.130118 AGCGGCAAGTCTGAATTATTAGG 58.870 43.478 1.45 0.00 0.00 2.69
881 925 4.084849 CGAGCGGCAAGTCTGAATTATTAG 60.085 45.833 1.45 0.00 0.00 1.73
882 926 3.802139 CGAGCGGCAAGTCTGAATTATTA 59.198 43.478 1.45 0.00 0.00 0.98
894 938 3.708220 GAGACTCCCGAGCGGCAAG 62.708 68.421 1.45 5.77 0.00 4.01
918 963 3.487942 CCGTGGTTTCGAAATTTTGAACC 59.512 43.478 18.60 20.23 30.55 3.62
947 992 2.381665 TAAAACTGCCGTGTGCGTGC 62.382 55.000 0.00 0.00 45.60 5.34
962 1007 0.736325 GGAGCGAGCGAGCAGTAAAA 60.736 55.000 9.01 0.00 40.15 1.52
966 1011 3.821055 GAGGAGCGAGCGAGCAGT 61.821 66.667 9.01 0.00 40.15 4.40
1082 1147 4.845307 GGAAGGGGGAGGGAGGGG 62.845 77.778 0.00 0.00 0.00 4.79
1083 1148 4.845307 GGGAAGGGGGAGGGAGGG 62.845 77.778 0.00 0.00 0.00 4.30
1280 1350 4.798682 GGGGAGCGGGAGGAGGAA 62.799 72.222 0.00 0.00 0.00 3.36
1307 1377 1.228925 GGGAGGGAGGGAGATACGG 60.229 68.421 0.00 0.00 0.00 4.02
1311 1381 2.416923 GGGAGGGAGGGAGGGAGAT 61.417 68.421 0.00 0.00 0.00 2.75
1314 1384 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
1318 1388 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
1319 1389 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
1322 1392 4.761304 AGGGGAGGGAGGGAGGGA 62.761 72.222 0.00 0.00 0.00 4.20
1328 1398 4.101077 AGGCAGAGGGGAGGGAGG 62.101 72.222 0.00 0.00 0.00 4.30
1329 1399 2.767496 CAGGCAGAGGGGAGGGAG 60.767 72.222 0.00 0.00 0.00 4.30
1332 1402 3.795041 CAGCAGGCAGAGGGGAGG 61.795 72.222 0.00 0.00 0.00 4.30
1333 1403 4.486503 GCAGCAGGCAGAGGGGAG 62.487 72.222 0.00 0.00 43.97 4.30
1342 1412 1.607628 CCTCATAGAAATGCAGCAGGC 59.392 52.381 0.00 0.00 45.13 4.85
1356 1917 0.032130 GCAGGATCGAACGCCTCATA 59.968 55.000 2.23 0.00 30.41 2.15
1357 1918 1.227380 GCAGGATCGAACGCCTCAT 60.227 57.895 2.23 0.00 30.41 2.90
1360 1921 2.185350 CAGCAGGATCGAACGCCT 59.815 61.111 0.00 0.00 33.99 5.52
1361 1922 2.892425 CCAGCAGGATCGAACGCC 60.892 66.667 0.00 0.00 36.89 5.68
1380 1941 4.157817 GCAGGCAGCAACGAAATG 57.842 55.556 0.00 0.00 44.79 2.32
1397 1958 4.274214 TCGATTGGAAGCTAAGCAATCATG 59.726 41.667 0.00 0.00 33.32 3.07
1516 2092 1.525995 ACACCGGCAACCAGAAGTG 60.526 57.895 0.00 0.00 0.00 3.16
1519 2095 1.821759 CACACACCGGCAACCAGAA 60.822 57.895 0.00 0.00 0.00 3.02
1567 2147 9.578576 AATGCATGATTCAGTTAACCTATATGT 57.421 29.630 0.00 0.00 0.00 2.29
1664 2245 4.697352 CCTTTTCCAGGTGTGAGTGAATAG 59.303 45.833 0.00 0.00 37.99 1.73
1667 2248 2.930950 CCTTTTCCAGGTGTGAGTGAA 58.069 47.619 0.00 0.00 37.99 3.18
1742 2363 0.604578 AGCGCACAAAAGGAATGCAT 59.395 45.000 11.47 0.00 39.39 3.96
1743 2364 0.388659 AAGCGCACAAAAGGAATGCA 59.611 45.000 11.47 0.00 39.39 3.96
1744 2365 0.785979 CAAGCGCACAAAAGGAATGC 59.214 50.000 11.47 0.00 35.96 3.56
1757 2378 3.929610 ACTGAGAAGATTAGAACAAGCGC 59.070 43.478 0.00 0.00 0.00 5.92
1781 2402 9.277783 AGCTGATGGAAGTTGATGTATTAATAC 57.722 33.333 17.18 17.18 0.00 1.89
1784 2450 7.337938 TGAGCTGATGGAAGTTGATGTATTAA 58.662 34.615 0.00 0.00 0.00 1.40
1895 2561 1.915614 GCACAGACCCATGTTGCTCG 61.916 60.000 0.00 0.00 0.00 5.03
1932 2598 7.254117 GCATATACCGAACATAAAGATCATCCG 60.254 40.741 0.00 0.00 0.00 4.18
2036 2764 9.282569 GCAGTCAGATAAATTTCCTATCTCAAT 57.717 33.333 0.00 0.00 34.53 2.57
2172 2900 1.235724 GGAGAGGTTCCGTGTTTTGG 58.764 55.000 0.00 0.00 35.91 3.28
2262 2990 9.675464 AATGCCATTATCATGAGAAACAATTTT 57.325 25.926 6.89 0.00 31.07 1.82
2269 2997 6.607970 AGAGGAATGCCATTATCATGAGAAA 58.392 36.000 6.89 1.16 36.29 2.52
2300 3028 7.444487 TGATGCTTCCTGATGAAAATAGAGATG 59.556 37.037 0.00 0.00 31.06 2.90
2305 3033 7.066645 TGTTCTGATGCTTCCTGATGAAAATAG 59.933 37.037 0.00 0.00 31.06 1.73
2326 3055 6.420913 AACTCCACTGTAATACACTGTTCT 57.579 37.500 0.00 0.00 37.22 3.01
2362 3091 0.937304 TGAACGCAGCAGTTTCTGTC 59.063 50.000 4.48 0.00 36.49 3.51
2416 3145 6.850752 TCAAGGTCACTGATTCTGTGTATA 57.149 37.500 19.31 2.44 35.37 1.47
2443 3172 3.386486 ACTGTATCTTCGAACAACGCAA 58.614 40.909 0.00 0.00 42.26 4.85
2535 3266 2.783135 TGGCCAAGAAAGATGACTGTC 58.217 47.619 0.61 0.00 0.00 3.51
2538 3269 3.446442 ACATGGCCAAGAAAGATGACT 57.554 42.857 16.33 0.00 0.00 3.41
2616 3383 6.996879 ACTCTGGGATGTCAATCAAATATCAG 59.003 38.462 0.00 0.00 34.17 2.90
2726 3493 3.799420 GTCTCTGCATTCCGAACATCTAC 59.201 47.826 0.00 0.00 0.00 2.59
2729 3496 1.936547 GGTCTCTGCATTCCGAACATC 59.063 52.381 0.00 0.00 0.00 3.06
2869 3636 3.606687 TGCTGATGGATATATGCTGCAG 58.393 45.455 10.11 10.11 0.00 4.41
2976 3743 4.944962 TCTGTTGTATGCTGTTGTATGC 57.055 40.909 0.00 0.00 0.00 3.14
3001 3768 4.887071 ACAGTCAAAAGAAAGCACCACATA 59.113 37.500 0.00 0.00 0.00 2.29
3059 3826 5.036737 CGAAAAGCTGAAAACAACAGACAT 58.963 37.500 0.00 0.00 37.54 3.06
3061 3828 4.412207 ACGAAAAGCTGAAAACAACAGAC 58.588 39.130 0.00 0.00 37.54 3.51
3065 3832 5.117897 TGTCAAACGAAAAGCTGAAAACAAC 59.882 36.000 0.00 0.00 0.00 3.32
3067 3834 4.799678 TGTCAAACGAAAAGCTGAAAACA 58.200 34.783 0.00 0.00 0.00 2.83
3069 3836 5.704888 TCTTGTCAAACGAAAAGCTGAAAA 58.295 33.333 0.00 0.00 29.06 2.29
3073 3840 8.230486 ACTATTATCTTGTCAAACGAAAAGCTG 58.770 33.333 0.00 0.00 29.06 4.24
3111 3878 1.918609 AGCGAATAGACGAAACGAAGC 59.081 47.619 0.00 0.00 35.09 3.86
3116 3883 5.159399 AGAGACTAGCGAATAGACGAAAC 57.841 43.478 0.00 0.00 35.30 2.78
3128 3895 2.494073 AGAACCCTTGAAGAGACTAGCG 59.506 50.000 0.00 0.00 0.00 4.26
3130 3897 3.513515 AGCAGAACCCTTGAAGAGACTAG 59.486 47.826 0.00 0.00 0.00 2.57
3157 3924 1.990799 TATCTGTTCAGTGCGTTCGG 58.009 50.000 0.00 0.00 0.00 4.30
3158 3925 2.285256 GCATATCTGTTCAGTGCGTTCG 60.285 50.000 0.00 0.00 0.00 3.95
3163 3930 2.353889 CACCTGCATATCTGTTCAGTGC 59.646 50.000 6.86 6.86 36.39 4.40
3165 3932 2.636830 GCACCTGCATATCTGTTCAGT 58.363 47.619 0.00 0.00 41.59 3.41
3168 3935 2.042686 TGGCACCTGCATATCTGTTC 57.957 50.000 0.00 0.00 44.36 3.18
3231 3998 1.519719 GGCTTGTTGTTGGGCACAA 59.480 52.632 0.00 0.00 43.55 3.33
3296 4063 6.173339 GGGAAGAAACAATACAGTCTGATCA 58.827 40.000 6.91 0.00 0.00 2.92
3328 4095 0.179004 TCGCATGTTTGACCCACCTT 60.179 50.000 0.00 0.00 0.00 3.50
3481 4248 5.046529 TGCCAACACACATTATCACAAAAC 58.953 37.500 0.00 0.00 0.00 2.43
3577 4344 1.905215 ACTCTGGGTGTTCTGATCCAG 59.095 52.381 0.00 0.00 45.92 3.86
3599 4366 5.294306 ACAGCACAGACAATATGGAAATACG 59.706 40.000 0.00 0.00 0.00 3.06
3620 4387 1.962807 TGGTCTGGGAAAAATGCACAG 59.037 47.619 0.00 0.00 38.13 3.66
3905 4672 3.019799 TGACAAGGCACAAACCCTTAA 57.980 42.857 0.00 0.00 40.63 1.85
3919 4686 3.374220 TCAAAGCCAAGCAATGACAAG 57.626 42.857 0.00 0.00 0.00 3.16
3924 4691 2.754946 ACCATCAAAGCCAAGCAATG 57.245 45.000 0.00 0.00 0.00 2.82
3936 4703 4.393680 GCGTAAACATGTTCCTACCATCAA 59.606 41.667 12.39 0.00 0.00 2.57
3956 4723 2.752238 AGCGAGCCTCTACAGCGT 60.752 61.111 0.00 0.00 34.64 5.07
3957 4724 2.278466 CAGCGAGCCTCTACAGCG 60.278 66.667 0.00 0.00 34.64 5.18
3970 4737 3.856638 GCAGTATCTCTTCAGATCCAGCG 60.857 52.174 0.00 0.00 40.18 5.18
4009 4776 1.404391 ACAGTATAGTTGCGAGGTCGG 59.596 52.381 0.89 0.00 40.23 4.79
4255 5045 8.307483 TGAACTTCTGAAGTAATTACTGAGGAG 58.693 37.037 22.30 20.49 41.91 3.69
4257 5047 8.833231 TTGAACTTCTGAAGTAATTACTGAGG 57.167 34.615 22.30 13.75 41.91 3.86
4270 5060 9.985730 AAGCATTATGAAATTTGAACTTCTGAA 57.014 25.926 0.00 0.00 0.00 3.02
4271 5061 9.630098 GAAGCATTATGAAATTTGAACTTCTGA 57.370 29.630 0.00 0.00 0.00 3.27
4272 5062 9.635520 AGAAGCATTATGAAATTTGAACTTCTG 57.364 29.630 0.00 0.00 38.83 3.02
4273 5063 9.852091 GAGAAGCATTATGAAATTTGAACTTCT 57.148 29.630 0.00 0.00 41.92 2.85
4274 5064 9.080915 GGAGAAGCATTATGAAATTTGAACTTC 57.919 33.333 0.00 0.00 0.00 3.01
4275 5065 8.810041 AGGAGAAGCATTATGAAATTTGAACTT 58.190 29.630 0.00 0.00 0.00 2.66
4276 5066 8.248945 CAGGAGAAGCATTATGAAATTTGAACT 58.751 33.333 0.00 0.00 0.00 3.01
4277 5067 8.246180 TCAGGAGAAGCATTATGAAATTTGAAC 58.754 33.333 0.00 0.00 0.00 3.18
4298 5088 3.928754 AGCATAGGTTGGAGTATCAGGA 58.071 45.455 0.00 0.00 36.25 3.86
4300 5090 5.674525 TGAAAGCATAGGTTGGAGTATCAG 58.325 41.667 0.00 0.00 36.25 2.90
4303 5093 5.663106 TCTCTGAAAGCATAGGTTGGAGTAT 59.337 40.000 0.00 0.00 0.00 2.12
4304 5094 5.023452 TCTCTGAAAGCATAGGTTGGAGTA 58.977 41.667 0.00 0.00 0.00 2.59
4306 5096 4.081198 AGTCTCTGAAAGCATAGGTTGGAG 60.081 45.833 0.00 0.00 0.00 3.86
4307 5097 3.840666 AGTCTCTGAAAGCATAGGTTGGA 59.159 43.478 0.00 0.00 0.00 3.53
4311 5101 7.906199 AATAGTAGTCTCTGAAAGCATAGGT 57.094 36.000 0.00 0.00 0.00 3.08
4312 5102 9.039870 CAAAATAGTAGTCTCTGAAAGCATAGG 57.960 37.037 0.00 0.00 0.00 2.57
4313 5103 9.809096 TCAAAATAGTAGTCTCTGAAAGCATAG 57.191 33.333 0.00 0.00 0.00 2.23
4314 5104 9.809096 CTCAAAATAGTAGTCTCTGAAAGCATA 57.191 33.333 0.00 0.00 0.00 3.14
4315 5105 8.317679 ACTCAAAATAGTAGTCTCTGAAAGCAT 58.682 33.333 0.00 0.00 0.00 3.79
4316 5106 7.671302 ACTCAAAATAGTAGTCTCTGAAAGCA 58.329 34.615 0.00 0.00 0.00 3.91
4317 5107 8.541133 AACTCAAAATAGTAGTCTCTGAAAGC 57.459 34.615 0.00 0.00 0.00 3.51
4318 5108 9.921637 AGAACTCAAAATAGTAGTCTCTGAAAG 57.078 33.333 0.00 0.00 0.00 2.62
4320 5110 9.915629 GAAGAACTCAAAATAGTAGTCTCTGAA 57.084 33.333 0.00 0.00 0.00 3.02
4321 5111 9.303116 AGAAGAACTCAAAATAGTAGTCTCTGA 57.697 33.333 0.00 0.00 0.00 3.27
4322 5112 9.921637 AAGAAGAACTCAAAATAGTAGTCTCTG 57.078 33.333 0.00 0.00 0.00 3.35
4325 5115 9.495572 CCAAAGAAGAACTCAAAATAGTAGTCT 57.504 33.333 0.00 0.00 0.00 3.24
4326 5116 8.722394 CCCAAAGAAGAACTCAAAATAGTAGTC 58.278 37.037 0.00 0.00 0.00 2.59
4327 5117 8.218488 ACCCAAAGAAGAACTCAAAATAGTAGT 58.782 33.333 0.00 0.00 0.00 2.73
4328 5118 8.622948 ACCCAAAGAAGAACTCAAAATAGTAG 57.377 34.615 0.00 0.00 0.00 2.57
4329 5119 8.990163 AACCCAAAGAAGAACTCAAAATAGTA 57.010 30.769 0.00 0.00 0.00 1.82
4330 5120 7.898014 AACCCAAAGAAGAACTCAAAATAGT 57.102 32.000 0.00 0.00 0.00 2.12
4331 5121 9.034544 CAAAACCCAAAGAAGAACTCAAAATAG 57.965 33.333 0.00 0.00 0.00 1.73
4332 5122 7.494298 GCAAAACCCAAAGAAGAACTCAAAATA 59.506 33.333 0.00 0.00 0.00 1.40
4333 5123 6.316140 GCAAAACCCAAAGAAGAACTCAAAAT 59.684 34.615 0.00 0.00 0.00 1.82
4346 5136 1.000843 GCCAGGTAGCAAAACCCAAAG 59.999 52.381 0.00 0.00 40.71 2.77
4347 5137 1.044611 GCCAGGTAGCAAAACCCAAA 58.955 50.000 0.00 0.00 40.71 3.28
4350 5140 1.250840 CCAGCCAGGTAGCAAAACCC 61.251 60.000 0.00 0.00 40.71 4.11
4399 5203 7.002250 TGCCAAATGAGGTTGAAATAATCAA 57.998 32.000 0.00 0.00 45.71 2.57
4405 5209 3.242011 ACCTGCCAAATGAGGTTGAAAT 58.758 40.909 0.00 0.00 39.75 2.17
4406 5210 2.627699 GACCTGCCAAATGAGGTTGAAA 59.372 45.455 0.00 0.00 42.95 2.69
4413 5223 4.376340 GGTAATTGACCTGCCAAATGAG 57.624 45.455 0.00 0.00 45.89 2.90
4451 5261 3.137728 TGAGTCAAGATGGATGGCATCAT 59.862 43.478 27.39 18.37 36.09 2.45
4460 5270 2.497273 TCGCTGAATGAGTCAAGATGGA 59.503 45.455 0.00 0.00 35.22 3.41
4464 5274 1.404717 GGCTCGCTGAATGAGTCAAGA 60.405 52.381 0.00 0.00 37.98 3.02
4479 5289 1.382522 ATGCTGGTATTTGTGGCTCG 58.617 50.000 0.00 0.00 0.00 5.03
4590 5400 0.741221 GAACTCGGAAAGGCGATGCT 60.741 55.000 0.00 0.00 0.00 3.79
4653 5490 3.991725 CTCCTTGGGCTGCTGGCTC 62.992 68.421 16.61 6.15 42.93 4.70
4654 5491 4.044439 CTCCTTGGGCTGCTGGCT 62.044 66.667 16.61 0.00 41.46 4.75
4655 5492 3.574074 TTCTCCTTGGGCTGCTGGC 62.574 63.158 8.77 8.77 40.90 4.85
4656 5493 1.378250 CTTCTCCTTGGGCTGCTGG 60.378 63.158 0.00 0.00 0.00 4.85
4657 5494 1.378250 CCTTCTCCTTGGGCTGCTG 60.378 63.158 0.00 0.00 0.00 4.41
4658 5495 1.849823 ACCTTCTCCTTGGGCTGCT 60.850 57.895 0.00 0.00 0.00 4.24
4659 5496 1.676967 CACCTTCTCCTTGGGCTGC 60.677 63.158 0.00 0.00 0.00 5.25
4660 5497 0.322008 GACACCTTCTCCTTGGGCTG 60.322 60.000 0.00 0.00 0.00 4.85
4661 5498 1.831652 CGACACCTTCTCCTTGGGCT 61.832 60.000 0.00 0.00 0.00 5.19
4662 5499 1.376037 CGACACCTTCTCCTTGGGC 60.376 63.158 0.00 0.00 0.00 5.36
4663 5500 1.376037 GCGACACCTTCTCCTTGGG 60.376 63.158 0.00 0.00 0.00 4.12
4664 5501 1.376037 GGCGACACCTTCTCCTTGG 60.376 63.158 0.00 0.00 34.51 3.61
4665 5502 1.376037 GGGCGACACCTTCTCCTTG 60.376 63.158 0.00 0.00 39.10 3.61
4666 5503 1.831652 CTGGGCGACACCTTCTCCTT 61.832 60.000 0.00 0.00 39.10 3.36
4667 5504 2.203788 TGGGCGACACCTTCTCCT 60.204 61.111 0.00 0.00 39.10 3.69
4668 5505 2.266055 CTGGGCGACACCTTCTCC 59.734 66.667 0.00 0.00 39.10 3.71
4669 5506 2.435059 GCTGGGCGACACCTTCTC 60.435 66.667 0.00 0.00 39.10 2.87
4676 5513 4.147449 CGGAGATGCTGGGCGACA 62.147 66.667 0.00 0.00 0.00 4.35
4765 5602 2.124151 CGGAGGCCTGGGGAATTG 60.124 66.667 12.00 0.00 0.00 2.32
4766 5603 3.420482 CCGGAGGCCTGGGGAATT 61.420 66.667 12.00 0.00 46.14 2.17
4785 5622 1.414061 CCGGAGAGGGAAGCATGGAT 61.414 60.000 0.00 0.00 35.97 3.41
4790 5627 1.535444 TTCACCGGAGAGGGAAGCA 60.535 57.895 9.46 0.00 46.96 3.91
4794 5631 2.683933 GGCTTCACCGGAGAGGGA 60.684 66.667 9.46 0.00 46.96 4.20
4797 5634 1.079543 CAGTGGCTTCACCGGAGAG 60.080 63.158 9.46 3.50 43.94 3.20
4830 5667 2.366167 AGCCGCTCCAGGATCCTT 60.366 61.111 13.00 0.00 0.00 3.36
4921 5758 1.069204 CTGTGTGCTACTGACACCACT 59.931 52.381 0.00 0.00 42.63 4.00
4954 5791 3.294493 GGGCTCAAACGGCAGCAA 61.294 61.111 0.00 0.00 37.38 3.91
4976 5813 0.771127 AGGTTTCAGTGGCTGGCTAA 59.229 50.000 2.00 0.00 31.51 3.09
5096 5935 5.641209 GTGTTGAGATCTTTGCACTAGATGT 59.359 40.000 13.72 10.44 32.64 3.06
5097 5936 5.640783 TGTGTTGAGATCTTTGCACTAGATG 59.359 40.000 13.72 0.00 32.64 2.90
5098 5937 5.798132 TGTGTTGAGATCTTTGCACTAGAT 58.202 37.500 18.56 9.66 35.12 1.98
5099 5938 5.213891 TGTGTTGAGATCTTTGCACTAGA 57.786 39.130 18.56 0.52 0.00 2.43
5100 5939 6.492007 AATGTGTTGAGATCTTTGCACTAG 57.508 37.500 18.56 0.00 0.00 2.57
5101 5940 6.882610 AAATGTGTTGAGATCTTTGCACTA 57.117 33.333 18.56 10.20 0.00 2.74
5102 5941 5.779529 AAATGTGTTGAGATCTTTGCACT 57.220 34.783 18.56 7.68 0.00 4.40
5103 5942 6.256321 ACAAAAATGTGTTGAGATCTTTGCAC 59.744 34.615 13.90 13.90 0.00 4.57
5104 5943 6.339730 ACAAAAATGTGTTGAGATCTTTGCA 58.660 32.000 0.00 0.00 0.00 4.08
5105 5944 6.833342 ACAAAAATGTGTTGAGATCTTTGC 57.167 33.333 0.00 0.00 0.00 3.68
5106 5945 8.638685 AGAACAAAAATGTGTTGAGATCTTTG 57.361 30.769 0.00 0.00 41.78 2.77
5107 5946 8.469200 TGAGAACAAAAATGTGTTGAGATCTTT 58.531 29.630 0.00 0.00 41.78 2.52
5108 5947 7.999679 TGAGAACAAAAATGTGTTGAGATCTT 58.000 30.769 0.00 0.00 41.78 2.40
5109 5948 7.572523 TGAGAACAAAAATGTGTTGAGATCT 57.427 32.000 0.00 0.00 41.78 2.75
5110 5949 7.917505 ACTTGAGAACAAAAATGTGTTGAGATC 59.082 33.333 0.00 0.00 41.78 2.75
5111 5950 7.703621 CACTTGAGAACAAAAATGTGTTGAGAT 59.296 33.333 0.00 0.00 41.78 2.75
5112 5951 7.028962 CACTTGAGAACAAAAATGTGTTGAGA 58.971 34.615 0.00 0.00 41.78 3.27
5113 5952 6.808212 ACACTTGAGAACAAAAATGTGTTGAG 59.192 34.615 0.00 0.00 41.78 3.02
5114 5953 6.686630 ACACTTGAGAACAAAAATGTGTTGA 58.313 32.000 0.00 0.00 41.78 3.18
5115 5954 6.949578 ACACTTGAGAACAAAAATGTGTTG 57.050 33.333 0.00 0.00 41.78 3.33
5116 5955 9.651913 ATTTACACTTGAGAACAAAAATGTGTT 57.348 25.926 0.00 0.00 44.38 3.32
5123 5962 9.677567 GCTTCATATTTACACTTGAGAACAAAA 57.322 29.630 0.00 0.00 35.49 2.44
5124 5963 9.066892 AGCTTCATATTTACACTTGAGAACAAA 57.933 29.630 0.00 0.00 35.49 2.83
5125 5964 8.621532 AGCTTCATATTTACACTTGAGAACAA 57.378 30.769 0.00 0.00 34.65 2.83
5126 5965 7.063426 CGAGCTTCATATTTACACTTGAGAACA 59.937 37.037 0.00 0.00 0.00 3.18
5127 5966 7.275779 TCGAGCTTCATATTTACACTTGAGAAC 59.724 37.037 0.00 0.00 0.00 3.01
5128 5967 7.275779 GTCGAGCTTCATATTTACACTTGAGAA 59.724 37.037 0.00 0.00 0.00 2.87
5129 5968 6.752351 GTCGAGCTTCATATTTACACTTGAGA 59.248 38.462 0.00 0.00 0.00 3.27
5130 5969 6.531594 TGTCGAGCTTCATATTTACACTTGAG 59.468 38.462 0.00 0.00 0.00 3.02
5131 5970 6.394809 TGTCGAGCTTCATATTTACACTTGA 58.605 36.000 0.00 0.00 0.00 3.02
5132 5971 6.647212 TGTCGAGCTTCATATTTACACTTG 57.353 37.500 0.00 0.00 0.00 3.16
5133 5972 7.334421 ACATTGTCGAGCTTCATATTTACACTT 59.666 33.333 0.00 0.00 0.00 3.16
5134 5973 6.818644 ACATTGTCGAGCTTCATATTTACACT 59.181 34.615 0.00 0.00 0.00 3.55
5135 5974 6.901887 CACATTGTCGAGCTTCATATTTACAC 59.098 38.462 0.00 0.00 0.00 2.90
5136 5975 6.593770 ACACATTGTCGAGCTTCATATTTACA 59.406 34.615 0.00 0.00 0.00 2.41
5137 5976 7.005062 ACACATTGTCGAGCTTCATATTTAC 57.995 36.000 0.00 0.00 0.00 2.01
5138 5977 7.609760 AACACATTGTCGAGCTTCATATTTA 57.390 32.000 0.00 0.00 0.00 1.40
5139 5978 6.500684 AACACATTGTCGAGCTTCATATTT 57.499 33.333 0.00 0.00 0.00 1.40
5140 5979 7.792374 ATAACACATTGTCGAGCTTCATATT 57.208 32.000 0.00 0.00 0.00 1.28
5141 5980 9.144747 GATATAACACATTGTCGAGCTTCATAT 57.855 33.333 0.00 0.00 0.00 1.78
5142 5981 8.141268 TGATATAACACATTGTCGAGCTTCATA 58.859 33.333 0.00 0.00 0.00 2.15
5143 5982 6.986231 TGATATAACACATTGTCGAGCTTCAT 59.014 34.615 0.00 0.00 0.00 2.57
5144 5983 6.255670 GTGATATAACACATTGTCGAGCTTCA 59.744 38.462 8.17 0.00 40.11 3.02
5145 5984 6.255670 TGTGATATAACACATTGTCGAGCTTC 59.744 38.462 11.44 0.00 44.29 3.86
5146 5985 6.106003 TGTGATATAACACATTGTCGAGCTT 58.894 36.000 11.44 0.00 44.29 3.74
5147 5986 5.660460 TGTGATATAACACATTGTCGAGCT 58.340 37.500 11.44 0.00 44.29 4.09
5148 5987 5.966636 TGTGATATAACACATTGTCGAGC 57.033 39.130 11.44 0.00 44.29 5.03
5157 5996 7.604549 TCTCGGTAGTTTTGTGATATAACACA 58.395 34.615 11.44 11.44 46.86 3.72
5158 5997 8.644318 ATCTCGGTAGTTTTGTGATATAACAC 57.356 34.615 6.20 6.20 40.68 3.32
5159 5998 8.471609 TGATCTCGGTAGTTTTGTGATATAACA 58.528 33.333 0.00 0.00 0.00 2.41
5160 5999 8.867112 TGATCTCGGTAGTTTTGTGATATAAC 57.133 34.615 0.00 0.00 0.00 1.89
5161 6000 9.878667 TTTGATCTCGGTAGTTTTGTGATATAA 57.121 29.630 0.00 0.00 0.00 0.98
5162 6001 9.309516 GTTTGATCTCGGTAGTTTTGTGATATA 57.690 33.333 0.00 0.00 0.00 0.86
5163 6002 7.822334 TGTTTGATCTCGGTAGTTTTGTGATAT 59.178 33.333 0.00 0.00 0.00 1.63
5164 6003 7.156000 TGTTTGATCTCGGTAGTTTTGTGATA 58.844 34.615 0.00 0.00 0.00 2.15
5165 6004 5.995282 TGTTTGATCTCGGTAGTTTTGTGAT 59.005 36.000 0.00 0.00 0.00 3.06
5166 6005 5.361427 TGTTTGATCTCGGTAGTTTTGTGA 58.639 37.500 0.00 0.00 0.00 3.58
5167 6006 5.666969 TGTTTGATCTCGGTAGTTTTGTG 57.333 39.130 0.00 0.00 0.00 3.33
5168 6007 5.587043 TGTTGTTTGATCTCGGTAGTTTTGT 59.413 36.000 0.00 0.00 0.00 2.83
5169 6008 6.055231 TGTTGTTTGATCTCGGTAGTTTTG 57.945 37.500 0.00 0.00 0.00 2.44
5170 6009 6.877611 ATGTTGTTTGATCTCGGTAGTTTT 57.122 33.333 0.00 0.00 0.00 2.43
5171 6010 6.485313 TGAATGTTGTTTGATCTCGGTAGTTT 59.515 34.615 0.00 0.00 0.00 2.66
5172 6011 5.995282 TGAATGTTGTTTGATCTCGGTAGTT 59.005 36.000 0.00 0.00 0.00 2.24
5173 6012 5.547465 TGAATGTTGTTTGATCTCGGTAGT 58.453 37.500 0.00 0.00 0.00 2.73
5174 6013 5.869344 TCTGAATGTTGTTTGATCTCGGTAG 59.131 40.000 0.00 0.00 0.00 3.18
5175 6014 5.789521 TCTGAATGTTGTTTGATCTCGGTA 58.210 37.500 0.00 0.00 0.00 4.02
5176 6015 4.641396 TCTGAATGTTGTTTGATCTCGGT 58.359 39.130 0.00 0.00 0.00 4.69
5177 6016 5.808042 ATCTGAATGTTGTTTGATCTCGG 57.192 39.130 0.00 0.00 0.00 4.63
5178 6017 9.855361 GTATTATCTGAATGTTGTTTGATCTCG 57.145 33.333 0.00 0.00 0.00 4.04
5187 6026 9.770097 CTGGTCTATGTATTATCTGAATGTTGT 57.230 33.333 0.00 0.00 0.00 3.32
5188 6027 8.715998 GCTGGTCTATGTATTATCTGAATGTTG 58.284 37.037 0.00 0.00 0.00 3.33
5189 6028 8.432013 TGCTGGTCTATGTATTATCTGAATGTT 58.568 33.333 0.00 0.00 0.00 2.71
5190 6029 7.966812 TGCTGGTCTATGTATTATCTGAATGT 58.033 34.615 0.00 0.00 0.00 2.71
5191 6030 7.064371 GCTGCTGGTCTATGTATTATCTGAATG 59.936 40.741 0.00 0.00 0.00 2.67
5192 6031 7.038445 AGCTGCTGGTCTATGTATTATCTGAAT 60.038 37.037 0.00 0.00 0.00 2.57
5193 6032 6.268617 AGCTGCTGGTCTATGTATTATCTGAA 59.731 38.462 0.00 0.00 0.00 3.02
5194 6033 5.777223 AGCTGCTGGTCTATGTATTATCTGA 59.223 40.000 0.00 0.00 0.00 3.27
5195 6034 6.035368 AGCTGCTGGTCTATGTATTATCTG 57.965 41.667 0.00 0.00 0.00 2.90
5196 6035 5.186797 GGAGCTGCTGGTCTATGTATTATCT 59.813 44.000 20.17 0.00 40.29 1.98
5197 6036 5.186797 AGGAGCTGCTGGTCTATGTATTATC 59.813 44.000 20.17 2.30 40.29 1.75
5198 6037 5.090139 AGGAGCTGCTGGTCTATGTATTAT 58.910 41.667 20.17 0.00 40.29 1.28
5199 6038 4.483950 AGGAGCTGCTGGTCTATGTATTA 58.516 43.478 20.17 0.00 40.29 0.98
5200 6039 3.312890 AGGAGCTGCTGGTCTATGTATT 58.687 45.455 20.17 0.00 40.29 1.89
5201 6040 2.969628 AGGAGCTGCTGGTCTATGTAT 58.030 47.619 20.17 0.52 40.29 2.29
5202 6041 2.461300 AGGAGCTGCTGGTCTATGTA 57.539 50.000 20.17 0.00 40.29 2.29
5203 6042 2.091610 TCTAGGAGCTGCTGGTCTATGT 60.092 50.000 19.25 7.48 40.29 2.29
5204 6043 2.557924 CTCTAGGAGCTGCTGGTCTATG 59.442 54.545 19.25 11.33 40.29 2.23
5205 6044 2.445145 TCTCTAGGAGCTGCTGGTCTAT 59.555 50.000 19.25 12.74 40.29 1.98
5206 6045 1.847088 TCTCTAGGAGCTGCTGGTCTA 59.153 52.381 19.25 5.41 40.29 2.59
5207 6046 0.628522 TCTCTAGGAGCTGCTGGTCT 59.371 55.000 19.25 4.42 40.29 3.85
5208 6047 1.032014 CTCTCTAGGAGCTGCTGGTC 58.968 60.000 19.25 13.79 39.76 4.02
5209 6048 0.334676 ACTCTCTAGGAGCTGCTGGT 59.665 55.000 19.25 5.97 45.48 4.00
5210 6049 2.158682 TCTACTCTCTAGGAGCTGCTGG 60.159 54.545 19.25 15.87 45.48 4.85
5211 6050 2.878406 GTCTACTCTCTAGGAGCTGCTG 59.122 54.545 19.25 8.13 45.48 4.41
5212 6051 2.507886 TGTCTACTCTCTAGGAGCTGCT 59.492 50.000 13.92 13.92 45.48 4.24
5213 6052 2.616842 GTGTCTACTCTCTAGGAGCTGC 59.383 54.545 0.00 0.00 45.48 5.25
5214 6053 3.876914 CAGTGTCTACTCTCTAGGAGCTG 59.123 52.174 0.00 3.75 45.48 4.24
5215 6054 3.778075 TCAGTGTCTACTCTCTAGGAGCT 59.222 47.826 7.83 0.00 45.48 4.09
5216 6055 4.145365 TCAGTGTCTACTCTCTAGGAGC 57.855 50.000 7.83 0.00 45.48 4.70
5217 6056 4.569162 CGTTCAGTGTCTACTCTCTAGGAG 59.431 50.000 6.67 6.67 46.87 3.69
5218 6057 4.020396 ACGTTCAGTGTCTACTCTCTAGGA 60.020 45.833 0.00 0.00 34.07 2.94
5219 6058 4.255301 ACGTTCAGTGTCTACTCTCTAGG 58.745 47.826 0.00 0.00 34.07 3.02
5220 6059 5.623335 CAACGTTCAGTGTCTACTCTCTAG 58.377 45.833 0.00 0.00 34.07 2.43
5221 6060 4.083431 GCAACGTTCAGTGTCTACTCTCTA 60.083 45.833 0.00 0.00 34.07 2.43
5222 6061 3.304794 GCAACGTTCAGTGTCTACTCTCT 60.305 47.826 0.00 0.00 34.07 3.10
5223 6062 2.981140 GCAACGTTCAGTGTCTACTCTC 59.019 50.000 0.00 0.00 34.07 3.20
5224 6063 2.623889 AGCAACGTTCAGTGTCTACTCT 59.376 45.455 0.00 0.00 34.07 3.24
5225 6064 2.981140 GAGCAACGTTCAGTGTCTACTC 59.019 50.000 0.00 0.00 34.07 2.59
5226 6065 2.604855 CGAGCAACGTTCAGTGTCTACT 60.605 50.000 0.00 0.00 35.86 2.57
5227 6066 1.714460 CGAGCAACGTTCAGTGTCTAC 59.286 52.381 0.00 0.00 37.22 2.59
5228 6067 1.929038 GCGAGCAACGTTCAGTGTCTA 60.929 52.381 0.00 0.00 44.60 2.59
5229 6068 1.215655 GCGAGCAACGTTCAGTGTCT 61.216 55.000 0.00 0.00 44.60 3.41
5230 6069 1.201825 GCGAGCAACGTTCAGTGTC 59.798 57.895 0.00 0.00 44.60 3.67
5231 6070 0.031585 TAGCGAGCAACGTTCAGTGT 59.968 50.000 0.00 0.00 44.60 3.55
5232 6071 1.136690 TTAGCGAGCAACGTTCAGTG 58.863 50.000 0.00 0.00 44.60 3.66
5233 6072 1.525619 GTTTAGCGAGCAACGTTCAGT 59.474 47.619 0.00 0.00 44.60 3.41
5234 6073 1.792949 AGTTTAGCGAGCAACGTTCAG 59.207 47.619 0.00 0.00 44.60 3.02
5235 6074 1.790623 GAGTTTAGCGAGCAACGTTCA 59.209 47.619 0.00 0.00 44.60 3.18
5236 6075 1.790623 TGAGTTTAGCGAGCAACGTTC 59.209 47.619 0.00 0.00 44.60 3.95
5237 6076 1.792949 CTGAGTTTAGCGAGCAACGTT 59.207 47.619 0.00 0.00 44.60 3.99
5238 6077 1.000607 TCTGAGTTTAGCGAGCAACGT 60.001 47.619 0.00 0.00 44.60 3.99
5239 6078 1.387084 GTCTGAGTTTAGCGAGCAACG 59.613 52.381 0.00 0.00 45.66 4.10
5240 6079 2.404215 TGTCTGAGTTTAGCGAGCAAC 58.596 47.619 0.00 0.00 0.00 4.17
5241 6080 2.812358 TGTCTGAGTTTAGCGAGCAA 57.188 45.000 0.00 0.00 0.00 3.91
5242 6081 2.029020 ACATGTCTGAGTTTAGCGAGCA 60.029 45.455 0.00 0.00 0.00 4.26
5243 6082 2.600867 GACATGTCTGAGTTTAGCGAGC 59.399 50.000 18.83 0.00 0.00 5.03
5244 6083 4.103365 AGACATGTCTGAGTTTAGCGAG 57.897 45.455 27.37 0.00 38.75 5.03
5245 6084 5.836821 ATAGACATGTCTGAGTTTAGCGA 57.163 39.130 33.76 13.57 40.71 4.93
5246 6085 6.893958 AAATAGACATGTCTGAGTTTAGCG 57.106 37.500 33.76 0.00 40.71 4.26
5260 6099 9.265901 GCACACTCATGAACTATAAATAGACAT 57.734 33.333 4.02 6.38 34.36 3.06
5261 6100 8.257306 TGCACACTCATGAACTATAAATAGACA 58.743 33.333 4.02 4.58 34.50 3.41
5262 6101 8.648557 TGCACACTCATGAACTATAAATAGAC 57.351 34.615 4.02 0.00 34.50 2.59
5263 6102 9.481340 GATGCACACTCATGAACTATAAATAGA 57.519 33.333 4.02 0.00 34.50 1.98
5264 6103 9.486497 AGATGCACACTCATGAACTATAAATAG 57.514 33.333 0.00 0.00 36.46 1.73
5265 6104 9.836864 AAGATGCACACTCATGAACTATAAATA 57.163 29.630 0.00 0.00 0.00 1.40
5266 6105 8.743085 AAGATGCACACTCATGAACTATAAAT 57.257 30.769 0.00 0.00 0.00 1.40
5267 6106 8.043113 AGAAGATGCACACTCATGAACTATAAA 58.957 33.333 0.00 0.00 0.00 1.40
5268 6107 7.559486 AGAAGATGCACACTCATGAACTATAA 58.441 34.615 0.00 0.00 0.00 0.98
5269 6108 7.117285 AGAAGATGCACACTCATGAACTATA 57.883 36.000 0.00 0.00 0.00 1.31
5270 6109 5.987098 AGAAGATGCACACTCATGAACTAT 58.013 37.500 0.00 0.00 0.00 2.12
5271 6110 5.411831 AGAAGATGCACACTCATGAACTA 57.588 39.130 0.00 0.00 0.00 2.24
5272 6111 4.283363 AGAAGATGCACACTCATGAACT 57.717 40.909 0.00 0.00 0.00 3.01
5273 6112 5.063186 CACTAGAAGATGCACACTCATGAAC 59.937 44.000 0.00 0.00 0.00 3.18
5274 6113 5.173664 CACTAGAAGATGCACACTCATGAA 58.826 41.667 0.00 0.00 0.00 2.57
5275 6114 4.752146 CACTAGAAGATGCACACTCATGA 58.248 43.478 0.00 0.00 0.00 3.07
5276 6115 3.309138 GCACTAGAAGATGCACACTCATG 59.691 47.826 0.00 0.00 41.65 3.07
5277 6116 3.055602 TGCACTAGAAGATGCACACTCAT 60.056 43.478 0.00 0.00 46.63 2.90
5278 6117 2.299867 TGCACTAGAAGATGCACACTCA 59.700 45.455 0.00 0.00 46.63 3.41
5279 6118 2.964740 TGCACTAGAAGATGCACACTC 58.035 47.619 0.00 0.00 46.63 3.51
5285 6124 2.012673 CAGGGTTGCACTAGAAGATGC 58.987 52.381 0.00 0.00 42.40 3.91
5286 6125 2.237143 TCCAGGGTTGCACTAGAAGATG 59.763 50.000 0.00 0.00 0.00 2.90
5287 6126 2.551270 TCCAGGGTTGCACTAGAAGAT 58.449 47.619 0.00 0.00 0.00 2.40
5290 6129 2.290896 CCATTCCAGGGTTGCACTAGAA 60.291 50.000 0.00 0.00 0.00 2.10
5293 6132 1.072266 ACCATTCCAGGGTTGCACTA 58.928 50.000 0.00 0.00 34.10 2.74
5298 6137 2.571653 TGAGAGTACCATTCCAGGGTTG 59.428 50.000 0.00 0.00 39.85 3.77
5300 6139 2.572104 GTTGAGAGTACCATTCCAGGGT 59.428 50.000 0.00 0.00 42.48 4.34
5305 6144 5.091261 AGACATGTTGAGAGTACCATTCC 57.909 43.478 0.00 0.00 0.00 3.01
5326 6165 8.230486 AGCTTCGTATTTACAATTGAGAACAAG 58.770 33.333 13.59 4.91 39.46 3.16
5329 6168 7.739295 TGAGCTTCGTATTTACAATTGAGAAC 58.261 34.615 13.59 2.19 0.00 3.01
5330 6169 7.413000 GCTGAGCTTCGTATTTACAATTGAGAA 60.413 37.037 13.59 6.58 0.00 2.87
5332 6171 6.188175 GCTGAGCTTCGTATTTACAATTGAG 58.812 40.000 13.59 0.00 0.00 3.02
5333 6172 5.220397 CGCTGAGCTTCGTATTTACAATTGA 60.220 40.000 13.59 0.00 0.00 2.57
5334 6173 4.957967 CGCTGAGCTTCGTATTTACAATTG 59.042 41.667 3.24 3.24 0.00 2.32
5346 6189 2.530177 TCAACTTATCGCTGAGCTTCG 58.470 47.619 1.78 0.00 0.00 3.79
5355 6198 7.116519 GTGGTATATCCTTTCTCAACTTATCGC 59.883 40.741 0.00 0.00 37.07 4.58
5417 6260 2.735134 GGTACTCGGTACAAGCTGTTTG 59.265 50.000 13.76 2.50 40.41 2.93
5427 6270 3.174375 GTTCAATGTCGGTACTCGGTAC 58.826 50.000 5.84 5.84 38.19 3.34
5431 6274 4.387559 TGAATTGTTCAATGTCGGTACTCG 59.612 41.667 0.00 0.00 36.59 4.18
5437 6280 4.090354 GCAACATGAATTGTTCAATGTCGG 59.910 41.667 0.00 1.65 45.55 4.79
5438 6281 4.919168 AGCAACATGAATTGTTCAATGTCG 59.081 37.500 0.00 0.00 45.55 4.35
5525 6368 1.674322 CCCCGTTCTTGCCATCGTT 60.674 57.895 0.00 0.00 0.00 3.85
5778 6628 2.811317 CTCAAGTCAGCGGCGTCC 60.811 66.667 9.37 0.00 0.00 4.79
5928 6778 1.148723 GCATCTGGAGCTGCTGGAT 59.851 57.895 7.01 9.83 34.62 3.41
5976 6826 4.742417 CTGGATGGCAGACTATATTCGAG 58.258 47.826 0.00 0.00 0.00 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.