Multiple sequence alignment - TraesCS3A01G074800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G074800 chr3A 100.000 5642 0 0 1 5642 46718101 46712460 0.000000e+00 10419.0
1 TraesCS3A01G074800 chrUn 93.355 4575 221 41 475 5014 39258930 39263456 0.000000e+00 6687.0
2 TraesCS3A01G074800 chrUn 91.765 425 29 2 1 425 39258514 39258932 2.260000e-163 586.0
3 TraesCS3A01G074800 chr3D 94.914 1750 64 12 1334 3066 35819023 35817282 0.000000e+00 2715.0
4 TraesCS3A01G074800 chr3D 92.990 1341 81 8 1 1339 35820472 35819143 0.000000e+00 1943.0
5 TraesCS3A01G074800 chr3D 90.756 1244 81 16 3791 5021 35816646 35815424 0.000000e+00 1629.0
6 TraesCS3A01G074800 chr3D 91.779 596 34 6 3064 3644 35817329 35816734 0.000000e+00 815.0
7 TraesCS3A01G074800 chr3D 93.631 157 9 1 3489 3644 567061981 567061825 3.400000e-57 233.0
8 TraesCS3A01G074800 chr3B 92.453 371 17 2 4645 5014 11855359 11855719 2.330000e-143 520.0
9 TraesCS3A01G074800 chr3B 97.297 37 1 0 5277 5313 670974630 670974594 4.720000e-06 63.9
10 TraesCS3A01G074800 chr3B 97.297 37 1 0 5277 5313 743087018 743087054 4.720000e-06 63.9
11 TraesCS3A01G074800 chr6B 91.935 372 18 3 4645 5014 349726849 349727210 1.400000e-140 510.0
12 TraesCS3A01G074800 chr6B 92.375 341 14 3 4645 4984 402301631 402301302 5.110000e-130 475.0
13 TraesCS3A01G074800 chr6B 93.865 163 7 3 5481 5642 690902051 690901891 5.650000e-60 243.0
14 TraesCS3A01G074800 chr6B 97.297 37 1 0 5277 5313 349727373 349727409 4.720000e-06 63.9
15 TraesCS3A01G074800 chr2B 91.549 213 17 1 4803 5014 51046352 51046564 5.530000e-75 292.0
16 TraesCS3A01G074800 chr2B 96.154 156 4 2 5487 5642 157726344 157726497 2.610000e-63 254.0
17 TraesCS3A01G074800 chr2B 94.904 157 6 2 5487 5642 480912698 480912853 1.570000e-60 244.0
18 TraesCS3A01G074800 chr2B 90.196 51 3 2 5277 5326 51046727 51046776 1.310000e-06 65.8
19 TraesCS3A01G074800 chr2B 88.235 51 4 2 5277 5326 11940033 11939984 6.100000e-05 60.2
20 TraesCS3A01G074800 chr7B 96.835 158 4 1 5485 5642 713959837 713959681 4.330000e-66 263.0
21 TraesCS3A01G074800 chr7B 96.203 158 2 3 5485 5642 467255632 467255785 7.250000e-64 255.0
22 TraesCS3A01G074800 chr7B 95.570 158 5 2 5485 5642 309725226 309725071 9.380000e-63 252.0
23 TraesCS3A01G074800 chr7B 90.769 130 2 1 4645 4774 31401314 31401195 1.260000e-36 165.0
24 TraesCS3A01G074800 chr5B 96.203 158 1 5 5485 5642 689871348 689871196 2.610000e-63 254.0
25 TraesCS3A01G074800 chr5B 96.154 156 5 1 5487 5642 693976243 693976397 2.610000e-63 254.0
26 TraesCS3A01G074800 chr5B 90.446 157 14 1 3489 3644 532727117 532726961 7.410000e-49 206.0
27 TraesCS3A01G074800 chr1B 95.513 156 5 2 5487 5642 540877817 540877664 1.210000e-61 248.0
28 TraesCS3A01G074800 chr7A 92.258 155 11 1 3486 3639 22334608 22334762 9.520000e-53 219.0
29 TraesCS3A01G074800 chr2A 87.179 156 12 2 3490 3644 761780583 761780435 2.700000e-38 171.0
30 TraesCS3A01G074800 chr2D 90.769 130 2 1 4645 4774 464739288 464739407 1.260000e-36 165.0
31 TraesCS3A01G074800 chr1D 89.231 130 4 1 4645 4774 2633749 2633868 2.720000e-33 154.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G074800 chr3A 46712460 46718101 5641 True 10419.00 10419 100.00000 1 5642 1 chr3A.!!$R1 5641
1 TraesCS3A01G074800 chrUn 39258514 39263456 4942 False 3636.50 6687 92.56000 1 5014 2 chrUn.!!$F1 5013
2 TraesCS3A01G074800 chr3D 35815424 35820472 5048 True 1775.50 2715 92.60975 1 5021 4 chr3D.!!$R2 5020
3 TraesCS3A01G074800 chr6B 349726849 349727409 560 False 286.95 510 94.61600 4645 5313 2 chr6B.!!$F1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 239 0.106819 GAGGAATGGATGTGCAGCCT 60.107 55.000 8.01 0.0 37.85 4.58 F
1009 1011 0.304705 GCACTGTTCCATAATCGGCG 59.695 55.000 0.00 0.0 0.00 6.46 F
2374 2515 1.066605 ACACGACGCTAAACTGTCACT 59.933 47.619 0.00 0.0 34.78 3.41 F
3716 3876 0.033781 TGGCATTCCAAACAAGCAGC 59.966 50.000 0.00 0.0 39.99 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1628 1763 1.184970 TCTGCTCATCCGTGACACCA 61.185 55.0 0.00 0.0 0.00 4.17 R
2498 2639 0.921256 AAAGCCTCTGCCCATAGGGT 60.921 55.0 3.68 0.0 46.51 4.34 R
4258 4431 0.100146 CGGCGTAGTCCTTGTAGACC 59.900 60.0 0.00 0.0 37.49 3.85 R
5117 5317 0.033208 GGCTGATTCAACCCCATGGA 60.033 55.0 15.22 0.0 34.81 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
149 150 6.765036 TGATTTCAGAGTCTCCATTGATTAGC 59.235 38.462 0.00 0.00 0.00 3.09
222 223 6.564709 TGATTTGTTTTCTGAGTCATGAGG 57.435 37.500 0.00 0.00 0.00 3.86
234 235 2.240414 AGTCATGAGGAATGGATGTGCA 59.760 45.455 0.00 0.00 36.86 4.57
235 236 2.617308 GTCATGAGGAATGGATGTGCAG 59.383 50.000 0.00 0.00 36.86 4.41
238 239 0.106819 GAGGAATGGATGTGCAGCCT 60.107 55.000 8.01 0.00 37.85 4.58
239 240 1.141657 GAGGAATGGATGTGCAGCCTA 59.858 52.381 8.01 0.00 37.85 3.93
240 241 1.142465 AGGAATGGATGTGCAGCCTAG 59.858 52.381 8.01 0.00 37.85 3.02
244 245 4.392940 GAATGGATGTGCAGCCTAGTATT 58.607 43.478 8.01 0.00 37.85 1.89
278 279 1.552792 CTCCTGGGGTCAGTCTCTTTC 59.447 57.143 0.00 0.00 39.31 2.62
301 303 5.523916 TCTGTGTCAAGTTACTGAAAAGAGC 59.476 40.000 0.00 0.00 0.00 4.09
312 314 3.817647 ACTGAAAAGAGCGCAGAAGAATT 59.182 39.130 11.47 0.00 33.94 2.17
340 342 5.088739 GCTTAACATGTGACCAGATTTTCG 58.911 41.667 0.00 0.00 0.00 3.46
377 379 4.137543 GTTCTTCCTTGGAAGCTTTCTCA 58.862 43.478 21.16 0.17 32.52 3.27
393 395 3.144657 TCTCAGCCTTCTTGATTTGCA 57.855 42.857 0.00 0.00 0.00 4.08
394 396 3.489355 TCTCAGCCTTCTTGATTTGCAA 58.511 40.909 0.00 0.00 34.73 4.08
395 397 4.084287 TCTCAGCCTTCTTGATTTGCAAT 58.916 39.130 0.00 0.00 35.59 3.56
396 398 4.157289 TCTCAGCCTTCTTGATTTGCAATC 59.843 41.667 0.00 0.79 35.59 2.67
414 416 2.202395 CCCTGTTGGTTGGCTGTGG 61.202 63.158 0.00 0.00 0.00 4.17
431 433 1.069227 GTGGATGTGCTTTCACGGTTC 60.069 52.381 0.00 0.00 46.01 3.62
439 441 2.225491 TGCTTTCACGGTTCAAGTATGC 59.775 45.455 0.00 0.00 0.00 3.14
449 451 1.951209 TCAAGTATGCTGTCCCAGGA 58.049 50.000 0.00 0.00 36.05 3.86
450 452 2.481441 TCAAGTATGCTGTCCCAGGAT 58.519 47.619 3.73 3.73 44.35 3.24
453 455 2.481441 AGTATGCTGTCCCAGGATGAA 58.519 47.619 8.30 0.00 42.27 2.57
464 466 4.642437 GTCCCAGGATGAAAGAAGGAAATC 59.358 45.833 0.00 0.00 39.69 2.17
572 574 7.755822 CAGACACTAACTAACAAGGATACAGAC 59.244 40.741 0.00 0.00 41.41 3.51
577 579 3.838317 ACTAACAAGGATACAGACAGGCA 59.162 43.478 0.00 0.00 41.41 4.75
585 587 6.006275 AGGATACAGACAGGCATTGTTTAT 57.994 37.500 0.00 0.00 38.96 1.40
586 588 6.058183 AGGATACAGACAGGCATTGTTTATC 58.942 40.000 0.00 3.20 38.96 1.75
645 647 2.621055 GGGTGTCTGTGTGCATGTTTTA 59.379 45.455 0.00 0.00 0.00 1.52
745 747 4.304110 ACTTCTTATTCGCTTGTTCGTCA 58.696 39.130 0.00 0.00 0.00 4.35
799 801 0.962356 AGACCTTCATTTGCCCTGCG 60.962 55.000 0.00 0.00 0.00 5.18
820 822 3.682718 CGGATCTTTGTGGATACTTGGCT 60.683 47.826 0.00 0.00 37.61 4.75
836 838 3.213206 TGGCTAGGCACCATCTTTATG 57.787 47.619 16.16 0.00 30.29 1.90
879 881 6.016777 GCCATACTCTTTTCCATTATGGTCTG 60.017 42.308 11.39 1.21 40.88 3.51
992 994 1.544691 GACCTAACTGAAGTCGAGGCA 59.455 52.381 10.04 0.00 35.55 4.75
993 995 1.272769 ACCTAACTGAAGTCGAGGCAC 59.727 52.381 10.04 0.00 35.55 5.01
1009 1011 0.304705 GCACTGTTCCATAATCGGCG 59.695 55.000 0.00 0.00 0.00 6.46
1039 1041 4.820716 GTGCTCTGCTCATAAGGAATCATT 59.179 41.667 0.00 0.00 0.00 2.57
1040 1042 5.049543 GTGCTCTGCTCATAAGGAATCATTC 60.050 44.000 0.00 0.00 0.00 2.67
1041 1043 5.061853 GCTCTGCTCATAAGGAATCATTCA 58.938 41.667 0.00 0.00 0.00 2.57
1042 1044 5.706369 GCTCTGCTCATAAGGAATCATTCAT 59.294 40.000 0.00 0.00 0.00 2.57
1043 1045 6.207025 GCTCTGCTCATAAGGAATCATTCATT 59.793 38.462 2.33 2.33 37.45 2.57
1058 1060 8.644318 AATCATTCATTCTTCTTTTATGCTGC 57.356 30.769 0.00 0.00 0.00 5.25
1117 1119 3.267031 AGGACTCTGGGTTTTATGGAAGG 59.733 47.826 0.00 0.00 0.00 3.46
1262 1264 2.359848 GGGTTGTTCTTTAACCGCAACT 59.640 45.455 0.00 0.00 46.73 3.16
1267 1269 2.248280 TCTTTAACCGCAACTGAGCA 57.752 45.000 0.00 0.00 0.00 4.26
1294 1296 8.522830 TCCTTGAGTAAATTGATTTGATTCACC 58.477 33.333 0.00 0.00 0.00 4.02
1367 1495 9.710900 ATACTTTGATTTTTCCATTTGACCTTC 57.289 29.630 0.00 0.00 0.00 3.46
1475 1606 6.700520 ACTGTTTAGCACTTAGTGTACTGAAC 59.299 38.462 14.23 14.93 38.36 3.18
1476 1607 5.987347 TGTTTAGCACTTAGTGTACTGAACC 59.013 40.000 14.23 3.35 37.59 3.62
1477 1608 6.183360 TGTTTAGCACTTAGTGTACTGAACCT 60.183 38.462 14.23 2.53 37.59 3.50
1478 1609 4.258702 AGCACTTAGTGTACTGAACCTG 57.741 45.455 14.23 0.00 35.75 4.00
1479 1610 3.895656 AGCACTTAGTGTACTGAACCTGA 59.104 43.478 14.23 0.00 35.75 3.86
1480 1611 4.344102 AGCACTTAGTGTACTGAACCTGAA 59.656 41.667 14.23 0.00 35.75 3.02
1540 1674 2.620251 ATGACAGCTTATGCGCCTAA 57.380 45.000 4.18 4.69 45.42 2.69
1588 1723 4.143030 CGTGAAATTGACTGCAGGAAGTAG 60.143 45.833 19.93 0.00 35.87 2.57
1628 1763 4.336889 TCCATTCAAAGACGAAGACAGT 57.663 40.909 0.00 0.00 0.00 3.55
1717 1852 4.641989 CCCACCTTGATTATCAACTTCCAG 59.358 45.833 3.20 0.00 32.21 3.86
1800 1941 2.770164 AGTCCATTTTCGTCCTCTGG 57.230 50.000 0.00 0.00 0.00 3.86
1809 1950 4.411256 TTTCGTCCTCTGGTTACAGTTT 57.589 40.909 0.00 0.00 45.14 2.66
1818 1959 7.878644 GTCCTCTGGTTACAGTTTAAGAGAAAT 59.121 37.037 0.00 0.00 45.14 2.17
1907 2048 4.174411 TGTGTCAGCATCTAGTGTGTAC 57.826 45.455 0.00 0.00 0.00 2.90
1915 2056 7.545965 GTCAGCATCTAGTGTGTACATAAACTT 59.454 37.037 12.33 0.00 0.00 2.66
1953 2094 9.147732 ACTCATTGTACTAATACATCTGATGGA 57.852 33.333 20.83 13.86 41.02 3.41
1967 2108 4.922206 TCTGATGGATTGTTTAGGCAAGT 58.078 39.130 0.00 0.00 0.00 3.16
1973 2114 3.193267 GGATTGTTTAGGCAAGTGCATGA 59.807 43.478 5.52 0.00 44.36 3.07
2061 2202 5.723672 TTACAAGTACTTCTGTCCTCCAG 57.276 43.478 4.77 0.00 42.97 3.86
2092 2233 4.335594 GCACACAGACAACTAGTTTTCCTT 59.664 41.667 16.37 3.10 0.00 3.36
2204 2345 4.159135 GGTAAGTCGGGTCTGAAGTCATTA 59.841 45.833 0.00 0.00 0.00 1.90
2359 2500 1.478916 TGGTGACAGTTCTTCACACGA 59.521 47.619 4.96 0.00 44.47 4.35
2374 2515 1.066605 ACACGACGCTAAACTGTCACT 59.933 47.619 0.00 0.00 34.78 3.41
2498 2639 3.849574 TGGATGGGATTCTTCACAAGGTA 59.150 43.478 0.00 0.00 39.17 3.08
2712 2853 2.297033 TCAAGCAGTGAATCCAAAAGGC 59.703 45.455 0.00 0.00 31.51 4.35
2758 2899 1.213926 GGATCACTCTTTGGATGGCCT 59.786 52.381 3.32 0.00 34.31 5.19
2791 2932 1.072806 TGCACTGCAGAGAACTTCCAT 59.927 47.619 23.35 0.00 33.32 3.41
2882 3023 4.565652 GCACCAGAAGTTCCAGAGGAAATA 60.566 45.833 0.00 0.00 43.86 1.40
2914 3055 1.815003 GAAACTTGCTGTGGATGAGGG 59.185 52.381 0.00 0.00 0.00 4.30
2946 3087 1.673665 GTTGCTGGTGGCTCTGAGG 60.674 63.158 6.83 0.00 42.39 3.86
3280 3433 3.576118 TGCACTCTTCTTAGTCTTCTGCT 59.424 43.478 0.00 0.00 0.00 4.24
3286 3439 6.142818 TCTTCTTAGTCTTCTGCTATCAGC 57.857 41.667 0.00 0.00 42.82 4.26
3337 3490 4.497006 GCCACCTTCTGATGATCAAATTCG 60.497 45.833 0.00 0.00 0.00 3.34
3368 3524 3.077359 CACCCAACCTTCAGAAGACATC 58.923 50.000 12.14 0.00 0.00 3.06
3422 3578 7.563888 TGAAGACAATCAGATCCATTCATTC 57.436 36.000 0.00 0.00 0.00 2.67
3426 3582 6.996879 AGACAATCAGATCCATTCATTCGATT 59.003 34.615 0.00 0.00 0.00 3.34
3581 3737 2.368548 TGCTGCTAGTTCAGAGAACCAA 59.631 45.455 0.00 0.00 36.19 3.67
3591 3750 3.819368 TCAGAGAACCAAACAATGCTGA 58.181 40.909 0.00 0.00 0.00 4.26
3644 3804 6.471146 CAGAACCTGCATTAGCCTTCTATAT 58.529 40.000 0.00 0.00 41.13 0.86
3648 3808 9.284968 GAACCTGCATTAGCCTTCTATATTTTA 57.715 33.333 0.00 0.00 41.13 1.52
3649 3809 9.813826 AACCTGCATTAGCCTTCTATATTTTAT 57.186 29.630 0.00 0.00 41.13 1.40
3650 3810 9.813826 ACCTGCATTAGCCTTCTATATTTTATT 57.186 29.630 0.00 0.00 41.13 1.40
3705 3865 3.760684 ACAGAACTTCAGAATGGCATTCC 59.239 43.478 31.08 16.89 40.13 3.01
3716 3876 0.033781 TGGCATTCCAAACAAGCAGC 59.966 50.000 0.00 0.00 39.99 5.25
3718 3878 1.540797 GGCATTCCAAACAAGCAGCAA 60.541 47.619 0.00 0.00 0.00 3.91
3720 3880 2.809696 GCATTCCAAACAAGCAGCAATT 59.190 40.909 0.00 0.00 0.00 2.32
3721 3881 3.364565 GCATTCCAAACAAGCAGCAATTG 60.365 43.478 0.00 0.00 0.00 2.32
3760 3933 8.571461 AAATACGATGAAGTTATTACCGAGTC 57.429 34.615 0.00 0.00 0.00 3.36
3762 3935 6.145338 ACGATGAAGTTATTACCGAGTCAT 57.855 37.500 0.00 0.00 0.00 3.06
3766 3939 7.382488 CGATGAAGTTATTACCGAGTCATCAAT 59.618 37.037 10.39 0.00 39.77 2.57
3776 3949 6.106877 ACCGAGTCATCAATGAAATTAACG 57.893 37.500 0.00 0.00 38.75 3.18
3777 3950 5.872617 ACCGAGTCATCAATGAAATTAACGA 59.127 36.000 0.00 0.00 38.75 3.85
3778 3951 6.538742 ACCGAGTCATCAATGAAATTAACGAT 59.461 34.615 0.00 0.00 38.75 3.73
3779 3952 7.065894 CCGAGTCATCAATGAAATTAACGATC 58.934 38.462 0.00 0.00 38.75 3.69
3780 3953 6.782824 CGAGTCATCAATGAAATTAACGATCG 59.217 38.462 14.88 14.88 38.75 3.69
3781 3954 6.948353 AGTCATCAATGAAATTAACGATCGG 58.052 36.000 20.98 1.23 38.75 4.18
3798 3971 8.712285 AACGATCGGAATTCTTGAATTTACTA 57.288 30.769 20.98 0.99 0.00 1.82
3809 3982 6.943981 TCTTGAATTTACTATGGAATTCGCG 58.056 36.000 0.00 0.00 42.41 5.87
3830 4003 8.922058 TCGCGTAACTTCTTATTTTAATCTCT 57.078 30.769 5.77 0.00 0.00 3.10
3901 4074 4.860907 GTCCATTCAAATGAAGCACATGAC 59.139 41.667 0.00 0.00 39.39 3.06
3928 4101 4.232188 AGTTGGCACTGATGATGATCTT 57.768 40.909 0.00 0.00 0.00 2.40
3971 4144 2.534298 CACCAACTAGCTCATCGACTG 58.466 52.381 0.00 0.00 0.00 3.51
3972 4145 2.164422 CACCAACTAGCTCATCGACTGA 59.836 50.000 0.00 0.00 0.00 3.41
3983 4156 4.902443 TCATCGACTGAGGAGAACATAC 57.098 45.455 0.00 0.00 30.17 2.39
3984 4157 4.527944 TCATCGACTGAGGAGAACATACT 58.472 43.478 0.00 0.00 30.17 2.12
3985 4158 4.950475 TCATCGACTGAGGAGAACATACTT 59.050 41.667 0.00 0.00 30.17 2.24
4005 4178 3.753294 TCTTCAGGAGAACAACCTCAC 57.247 47.619 0.00 0.00 35.35 3.51
4012 4185 0.680061 AGAACAACCTCACCGACCTC 59.320 55.000 0.00 0.00 0.00 3.85
4035 4208 0.036577 GCTCTCCAAGAAGCAGCAGA 60.037 55.000 0.00 0.00 0.00 4.26
4036 4209 1.407162 GCTCTCCAAGAAGCAGCAGAT 60.407 52.381 0.00 0.00 0.00 2.90
4039 4212 2.504585 TCTCCAAGAAGCAGCAGATGAT 59.495 45.455 0.00 0.00 0.00 2.45
4072 4245 2.434134 CGAGCTGGCGTACGTCAAC 61.434 63.158 24.32 19.67 0.00 3.18
4124 4297 2.174349 CGCTGTTCGAAGCTTGGC 59.826 61.111 2.10 0.00 41.24 4.52
4228 4401 4.863925 GCCGACGAGCTGCTCCTC 62.864 72.222 22.97 19.03 0.00 3.71
4240 4413 0.539669 TGCTCCTCTTCGACCTGACA 60.540 55.000 0.00 0.00 0.00 3.58
4258 4431 4.785512 AACGAGGCGCTGCTCGAG 62.786 66.667 32.96 8.45 44.85 4.04
4261 4434 4.863925 GAGGCGCTGCTCGAGGTC 62.864 72.222 15.58 0.00 41.67 3.85
4440 4613 4.803426 GCTGTCGAGCGACCTGGG 62.803 72.222 18.98 8.71 43.97 4.45
4566 4739 4.555511 GCTCGCAAAGTTTTGAGTCTTGAT 60.556 41.667 8.70 0.00 40.55 2.57
4572 4751 7.360353 CGCAAAGTTTTGAGTCTTGATGATAGA 60.360 37.037 8.70 0.00 40.55 1.98
4604 4783 1.287442 TCATTTATTCTGCCTGCCCCA 59.713 47.619 0.00 0.00 0.00 4.96
4691 4870 7.051623 GTGTGAGGGGATGTTACATTACATTA 58.948 38.462 0.00 0.00 38.80 1.90
4692 4871 7.012044 GTGTGAGGGGATGTTACATTACATTAC 59.988 40.741 0.00 1.71 38.80 1.89
4693 4872 7.051623 GTGAGGGGATGTTACATTACATTACA 58.948 38.462 0.00 0.00 38.80 2.41
4694 4873 7.719633 GTGAGGGGATGTTACATTACATTACAT 59.280 37.037 0.00 0.00 38.80 2.29
4695 4874 8.278639 TGAGGGGATGTTACATTACATTACATT 58.721 33.333 0.00 0.00 38.80 2.71
4805 4988 7.680730 AGAATGTTGTTAGGTCATCTTAGTGT 58.319 34.615 0.00 0.00 0.00 3.55
4851 5034 3.054875 TGAGAATTGAGTGGACATGGGAG 60.055 47.826 0.00 0.00 0.00 4.30
4891 5075 8.993121 ACTAGTGTCTGTTTTGAATGTATCTTG 58.007 33.333 0.00 0.00 0.00 3.02
4933 5117 3.040099 GGAACAACAATTTGTCGGTTCG 58.960 45.455 25.03 8.26 45.69 3.95
4976 5161 4.970662 TTTACATGAGGAGAATGCAAGC 57.029 40.909 0.00 0.00 0.00 4.01
5000 5185 5.506317 CGATAATTCTTCTGGGTTGATTGGC 60.506 44.000 0.00 0.00 0.00 4.52
5006 5191 2.517959 TCTGGGTTGATTGGCTTCTTG 58.482 47.619 0.00 0.00 0.00 3.02
5007 5192 1.547372 CTGGGTTGATTGGCTTCTTGG 59.453 52.381 0.00 0.00 0.00 3.61
5014 5199 5.335976 GGTTGATTGGCTTCTTGGTCTTTAG 60.336 44.000 0.00 0.00 0.00 1.85
5046 5246 9.389755 ACTTCTTTCTAGATCTTTATTTGGCTC 57.610 33.333 0.00 0.00 0.00 4.70
5047 5247 8.738645 TTCTTTCTAGATCTTTATTTGGCTCC 57.261 34.615 0.00 0.00 0.00 4.70
5048 5248 8.095452 TCTTTCTAGATCTTTATTTGGCTCCT 57.905 34.615 0.00 0.00 0.00 3.69
5049 5249 8.207545 TCTTTCTAGATCTTTATTTGGCTCCTC 58.792 37.037 0.00 0.00 0.00 3.71
5050 5250 7.682787 TTCTAGATCTTTATTTGGCTCCTCT 57.317 36.000 0.00 0.00 0.00 3.69
5051 5251 7.682787 TCTAGATCTTTATTTGGCTCCTCTT 57.317 36.000 0.00 0.00 0.00 2.85
5052 5252 7.504403 TCTAGATCTTTATTTGGCTCCTCTTG 58.496 38.462 0.00 0.00 0.00 3.02
5054 5254 6.488715 AGATCTTTATTTGGCTCCTCTTGTT 58.511 36.000 0.00 0.00 0.00 2.83
5056 5256 6.976934 TCTTTATTTGGCTCCTCTTGTTTT 57.023 33.333 0.00 0.00 0.00 2.43
5057 5257 7.360113 TCTTTATTTGGCTCCTCTTGTTTTT 57.640 32.000 0.00 0.00 0.00 1.94
5080 5280 7.425224 TTTTAGGGGTGAAATCAAACTTTGA 57.575 32.000 6.67 6.67 45.01 2.69
5101 5301 5.698832 TGATTTATCAAAAGCCACAGTTCG 58.301 37.500 0.00 0.00 33.08 3.95
5102 5302 5.240623 TGATTTATCAAAAGCCACAGTTCGT 59.759 36.000 0.00 0.00 33.08 3.85
5103 5303 4.481930 TTATCAAAAGCCACAGTTCGTG 57.518 40.909 0.00 0.00 45.92 4.35
5113 5313 3.040147 CACAGTTCGTGGGATACAAGT 57.960 47.619 0.00 0.00 42.34 3.16
5114 5314 3.399330 CACAGTTCGTGGGATACAAGTT 58.601 45.455 0.00 0.00 42.34 2.66
5115 5315 3.813166 CACAGTTCGTGGGATACAAGTTT 59.187 43.478 0.00 0.00 42.34 2.66
5116 5316 3.813166 ACAGTTCGTGGGATACAAGTTTG 59.187 43.478 0.00 0.00 39.74 2.93
5117 5317 3.813166 CAGTTCGTGGGATACAAGTTTGT 59.187 43.478 2.75 2.75 44.86 2.83
5118 5318 4.062991 AGTTCGTGGGATACAAGTTTGTC 58.937 43.478 0.00 0.00 42.35 3.18
5119 5319 3.048337 TCGTGGGATACAAGTTTGTCC 57.952 47.619 0.00 0.00 42.35 4.02
5120 5320 2.369203 TCGTGGGATACAAGTTTGTCCA 59.631 45.455 0.00 0.63 42.35 4.02
5121 5321 3.008594 TCGTGGGATACAAGTTTGTCCAT 59.991 43.478 0.00 0.00 42.35 3.41
5122 5322 3.126858 CGTGGGATACAAGTTTGTCCATG 59.873 47.826 0.00 5.16 42.35 3.66
5123 5323 3.443681 GTGGGATACAAGTTTGTCCATGG 59.556 47.826 4.97 4.97 42.35 3.66
5124 5324 3.023832 GGGATACAAGTTTGTCCATGGG 58.976 50.000 13.02 0.00 42.35 4.00
5125 5325 3.023832 GGATACAAGTTTGTCCATGGGG 58.976 50.000 13.02 0.00 42.35 4.96
5126 5326 3.563479 GGATACAAGTTTGTCCATGGGGT 60.563 47.826 13.02 0.72 42.35 4.95
5127 5327 2.470057 ACAAGTTTGTCCATGGGGTT 57.530 45.000 13.02 0.00 36.50 4.11
5128 5328 2.038659 ACAAGTTTGTCCATGGGGTTG 58.961 47.619 13.02 9.10 36.50 3.77
5129 5329 2.315176 CAAGTTTGTCCATGGGGTTGA 58.685 47.619 13.02 0.00 34.93 3.18
5130 5330 2.697751 CAAGTTTGTCCATGGGGTTGAA 59.302 45.455 13.02 0.00 34.93 2.69
5131 5331 3.258722 AGTTTGTCCATGGGGTTGAAT 57.741 42.857 13.02 0.00 34.93 2.57
5132 5332 3.165071 AGTTTGTCCATGGGGTTGAATC 58.835 45.455 13.02 0.00 34.93 2.52
5133 5333 2.896685 GTTTGTCCATGGGGTTGAATCA 59.103 45.455 13.02 0.00 34.93 2.57
5134 5334 2.512692 TGTCCATGGGGTTGAATCAG 57.487 50.000 13.02 0.00 34.93 2.90
5135 5335 1.106285 GTCCATGGGGTTGAATCAGC 58.894 55.000 13.02 0.00 34.93 4.26
5136 5336 0.033208 TCCATGGGGTTGAATCAGCC 60.033 55.000 13.02 7.66 33.90 4.85
5137 5337 0.324552 CCATGGGGTTGAATCAGCCA 60.325 55.000 17.73 0.00 36.44 4.75
5138 5338 0.819582 CATGGGGTTGAATCAGCCAC 59.180 55.000 17.73 14.88 38.66 5.01
5139 5339 1.849832 TGGGGTTGAATCAGCCACA 59.150 52.632 17.28 17.28 45.53 4.17
5140 5340 0.539438 TGGGGTTGAATCAGCCACAC 60.539 55.000 17.28 7.29 42.99 3.82
5141 5341 0.539438 GGGGTTGAATCAGCCACACA 60.539 55.000 17.73 0.00 38.07 3.72
5142 5342 1.549203 GGGTTGAATCAGCCACACAT 58.451 50.000 17.73 0.00 36.44 3.21
5143 5343 1.203052 GGGTTGAATCAGCCACACATG 59.797 52.381 17.73 0.00 36.44 3.21
5152 5352 2.872557 CCACACATGGCGCTTCTG 59.127 61.111 7.64 5.04 39.82 3.02
5153 5353 1.672030 CCACACATGGCGCTTCTGA 60.672 57.895 7.64 0.00 39.82 3.27
5154 5354 1.028330 CCACACATGGCGCTTCTGAT 61.028 55.000 7.64 0.00 39.82 2.90
5155 5355 0.376152 CACACATGGCGCTTCTGATC 59.624 55.000 7.64 0.00 0.00 2.92
5156 5356 0.251354 ACACATGGCGCTTCTGATCT 59.749 50.000 7.64 0.00 0.00 2.75
5157 5357 1.482182 ACACATGGCGCTTCTGATCTA 59.518 47.619 7.64 0.00 0.00 1.98
5158 5358 2.093500 ACACATGGCGCTTCTGATCTAA 60.093 45.455 7.64 0.00 0.00 2.10
5159 5359 2.938451 CACATGGCGCTTCTGATCTAAA 59.062 45.455 7.64 0.00 0.00 1.85
5160 5360 3.002042 CACATGGCGCTTCTGATCTAAAG 59.998 47.826 7.64 0.00 0.00 1.85
5161 5361 3.118629 ACATGGCGCTTCTGATCTAAAGA 60.119 43.478 7.64 0.00 0.00 2.52
5162 5362 3.610040 TGGCGCTTCTGATCTAAAGAA 57.390 42.857 7.64 3.47 32.80 2.52
5193 5393 7.916914 TTTTAGCTAAACTATGAGTTCCACC 57.083 36.000 18.45 0.00 37.47 4.61
5194 5394 6.614694 TTAGCTAAACTATGAGTTCCACCA 57.385 37.500 2.97 0.00 37.47 4.17
5195 5395 5.700402 AGCTAAACTATGAGTTCCACCAT 57.300 39.130 0.00 0.00 37.47 3.55
5196 5396 6.067217 AGCTAAACTATGAGTTCCACCATT 57.933 37.500 0.00 0.00 37.47 3.16
5197 5397 6.485171 AGCTAAACTATGAGTTCCACCATTT 58.515 36.000 0.00 0.00 37.47 2.32
5198 5398 6.375455 AGCTAAACTATGAGTTCCACCATTTG 59.625 38.462 0.00 0.00 37.47 2.32
5199 5399 5.391312 AAACTATGAGTTCCACCATTTGC 57.609 39.130 0.00 0.00 37.47 3.68
5200 5400 3.356290 ACTATGAGTTCCACCATTTGCC 58.644 45.455 0.00 0.00 0.00 4.52
5201 5401 1.176527 ATGAGTTCCACCATTTGCCG 58.823 50.000 0.00 0.00 0.00 5.69
5202 5402 0.109532 TGAGTTCCACCATTTGCCGA 59.890 50.000 0.00 0.00 0.00 5.54
5203 5403 1.243902 GAGTTCCACCATTTGCCGAA 58.756 50.000 0.00 0.00 0.00 4.30
5204 5404 0.958822 AGTTCCACCATTTGCCGAAC 59.041 50.000 0.00 0.00 34.40 3.95
5205 5405 0.958822 GTTCCACCATTTGCCGAACT 59.041 50.000 0.00 0.00 32.07 3.01
5206 5406 0.958091 TTCCACCATTTGCCGAACTG 59.042 50.000 0.00 0.00 0.00 3.16
5207 5407 0.893270 TCCACCATTTGCCGAACTGG 60.893 55.000 0.00 0.00 42.50 4.00
5208 5408 1.178534 CCACCATTTGCCGAACTGGT 61.179 55.000 0.00 0.00 42.66 4.00
5213 5413 2.422597 CATTTGCCGAACTGGTAGTGA 58.577 47.619 0.00 0.00 41.21 3.41
5232 5432 1.000385 GATCACCGAGAGAGGCTCATG 60.000 57.143 18.26 5.07 44.15 3.07
5233 5433 1.227205 CACCGAGAGAGGCTCATGC 60.227 63.158 18.26 5.61 44.15 4.06
5234 5434 1.381056 ACCGAGAGAGGCTCATGCT 60.381 57.895 18.26 10.67 44.15 3.79
5249 5449 4.023365 GCTCATGCTAGAAATGGGTTCATC 60.023 45.833 0.00 0.00 36.01 2.92
5253 5453 2.614057 GCTAGAAATGGGTTCATCGTGG 59.386 50.000 0.00 0.00 38.86 4.94
5260 5460 0.608035 GGGTTCATCGTGGCCTGAAA 60.608 55.000 3.32 0.00 33.45 2.69
5261 5461 1.243902 GGTTCATCGTGGCCTGAAAA 58.756 50.000 3.32 0.00 33.45 2.29
5284 5503 1.450211 CTTGAACCCGTCACCAGGT 59.550 57.895 0.00 0.00 35.39 4.00
5313 5532 2.092429 GTCCAGCCCAAACCATCTATCA 60.092 50.000 0.00 0.00 0.00 2.15
5314 5533 2.785269 TCCAGCCCAAACCATCTATCAT 59.215 45.455 0.00 0.00 0.00 2.45
5315 5534 3.152341 CCAGCCCAAACCATCTATCATC 58.848 50.000 0.00 0.00 0.00 2.92
5316 5535 3.435457 CCAGCCCAAACCATCTATCATCA 60.435 47.826 0.00 0.00 0.00 3.07
5317 5536 3.819337 CAGCCCAAACCATCTATCATCAG 59.181 47.826 0.00 0.00 0.00 2.90
5318 5537 3.152341 GCCCAAACCATCTATCATCAGG 58.848 50.000 0.00 0.00 0.00 3.86
5319 5538 3.152341 CCCAAACCATCTATCATCAGGC 58.848 50.000 0.00 0.00 0.00 4.85
5320 5539 3.181436 CCCAAACCATCTATCATCAGGCT 60.181 47.826 0.00 0.00 0.00 4.58
5321 5540 4.467769 CCAAACCATCTATCATCAGGCTT 58.532 43.478 0.00 0.00 0.00 4.35
5322 5541 4.891756 CCAAACCATCTATCATCAGGCTTT 59.108 41.667 0.00 0.00 0.00 3.51
5323 5542 5.221185 CCAAACCATCTATCATCAGGCTTTG 60.221 44.000 0.00 0.00 0.00 2.77
5324 5543 4.096190 ACCATCTATCATCAGGCTTTGG 57.904 45.455 0.00 0.00 0.00 3.28
5325 5544 3.181436 ACCATCTATCATCAGGCTTTGGG 60.181 47.826 0.00 0.00 0.00 4.12
5326 5545 3.073503 CCATCTATCATCAGGCTTTGGGA 59.926 47.826 0.00 0.00 0.00 4.37
5327 5546 4.325119 CATCTATCATCAGGCTTTGGGAG 58.675 47.826 0.00 0.00 0.00 4.30
5328 5547 3.387962 TCTATCATCAGGCTTTGGGAGT 58.612 45.455 0.00 0.00 0.00 3.85
5329 5548 4.556697 TCTATCATCAGGCTTTGGGAGTA 58.443 43.478 0.00 0.00 0.00 2.59
5330 5549 4.968719 TCTATCATCAGGCTTTGGGAGTAA 59.031 41.667 0.00 0.00 0.00 2.24
5331 5550 3.634397 TCATCAGGCTTTGGGAGTAAG 57.366 47.619 0.00 0.00 0.00 2.34
5332 5551 2.239654 TCATCAGGCTTTGGGAGTAAGG 59.760 50.000 0.00 0.00 0.00 2.69
5333 5552 0.991920 TCAGGCTTTGGGAGTAAGGG 59.008 55.000 0.00 0.00 0.00 3.95
5334 5553 0.034089 CAGGCTTTGGGAGTAAGGGG 60.034 60.000 0.00 0.00 0.00 4.79
5335 5554 1.214992 AGGCTTTGGGAGTAAGGGGG 61.215 60.000 0.00 0.00 0.00 5.40
5371 5590 7.259290 CCAAGATATGGGTGTACAAATGTAC 57.741 40.000 15.16 15.16 46.24 2.90
5385 5604 5.764131 ACAAATGTACACCCGTTAATTGTG 58.236 37.500 0.00 0.00 36.11 3.33
5386 5605 5.157781 CAAATGTACACCCGTTAATTGTGG 58.842 41.667 0.00 0.00 34.33 4.17
5387 5606 2.152830 TGTACACCCGTTAATTGTGGC 58.847 47.619 0.00 0.00 34.33 5.01
5388 5607 2.224572 TGTACACCCGTTAATTGTGGCT 60.225 45.455 0.00 0.00 34.33 4.75
5389 5608 1.530323 ACACCCGTTAATTGTGGCTC 58.470 50.000 6.84 0.00 34.33 4.70
5390 5609 1.073284 ACACCCGTTAATTGTGGCTCT 59.927 47.619 6.84 0.00 34.33 4.09
5391 5610 1.737793 CACCCGTTAATTGTGGCTCTC 59.262 52.381 0.00 0.00 0.00 3.20
5392 5611 1.349688 ACCCGTTAATTGTGGCTCTCA 59.650 47.619 0.00 0.00 0.00 3.27
5393 5612 1.737793 CCCGTTAATTGTGGCTCTCAC 59.262 52.381 0.00 0.00 46.23 3.51
5394 5613 1.737793 CCGTTAATTGTGGCTCTCACC 59.262 52.381 0.00 0.00 45.48 4.02
5395 5614 1.393539 CGTTAATTGTGGCTCTCACCG 59.606 52.381 0.00 0.00 45.48 4.94
5396 5615 2.423577 GTTAATTGTGGCTCTCACCGT 58.576 47.619 0.00 0.00 45.48 4.83
5397 5616 3.592059 GTTAATTGTGGCTCTCACCGTA 58.408 45.455 0.00 0.00 45.48 4.02
5398 5617 2.851263 AATTGTGGCTCTCACCGTAA 57.149 45.000 0.00 0.00 45.48 3.18
5399 5618 2.386661 ATTGTGGCTCTCACCGTAAG 57.613 50.000 0.00 0.00 45.48 2.34
5400 5619 1.334160 TTGTGGCTCTCACCGTAAGA 58.666 50.000 0.00 0.00 45.48 2.10
5401 5620 1.334160 TGTGGCTCTCACCGTAAGAA 58.666 50.000 0.00 0.00 45.48 2.52
5402 5621 1.899814 TGTGGCTCTCACCGTAAGAAT 59.100 47.619 0.00 0.00 45.48 2.40
5403 5622 2.271800 GTGGCTCTCACCGTAAGAATG 58.728 52.381 0.00 0.00 40.39 2.67
5404 5623 1.899814 TGGCTCTCACCGTAAGAATGT 59.100 47.619 0.00 0.00 43.02 2.71
5405 5624 2.271800 GGCTCTCACCGTAAGAATGTG 58.728 52.381 0.00 0.00 43.02 3.21
5406 5625 2.353803 GGCTCTCACCGTAAGAATGTGT 60.354 50.000 0.00 0.00 43.02 3.72
5407 5626 3.119245 GGCTCTCACCGTAAGAATGTGTA 60.119 47.826 0.00 0.00 43.02 2.90
5408 5627 3.858238 GCTCTCACCGTAAGAATGTGTAC 59.142 47.826 0.00 0.00 43.02 2.90
5409 5628 4.421948 CTCTCACCGTAAGAATGTGTACC 58.578 47.826 0.00 0.00 43.02 3.34
5410 5629 4.084287 TCTCACCGTAAGAATGTGTACCT 58.916 43.478 0.00 0.00 43.02 3.08
5411 5630 4.082408 TCTCACCGTAAGAATGTGTACCTG 60.082 45.833 0.00 0.00 43.02 4.00
5412 5631 2.671396 CACCGTAAGAATGTGTACCTGC 59.329 50.000 0.00 0.00 43.02 4.85
5413 5632 2.300723 ACCGTAAGAATGTGTACCTGCA 59.699 45.455 0.00 0.00 43.02 4.41
5414 5633 3.244284 ACCGTAAGAATGTGTACCTGCAA 60.244 43.478 0.00 0.00 43.02 4.08
5415 5634 3.370978 CCGTAAGAATGTGTACCTGCAAG 59.629 47.826 0.00 0.00 43.02 4.01
5416 5635 3.181520 CGTAAGAATGTGTACCTGCAAGC 60.182 47.826 0.00 0.00 43.02 4.01
5417 5636 2.867109 AGAATGTGTACCTGCAAGCT 57.133 45.000 0.00 0.00 0.00 3.74
5418 5637 3.146104 AGAATGTGTACCTGCAAGCTT 57.854 42.857 0.00 0.00 0.00 3.74
5419 5638 4.286297 AGAATGTGTACCTGCAAGCTTA 57.714 40.909 0.00 0.00 0.00 3.09
5420 5639 4.651778 AGAATGTGTACCTGCAAGCTTAA 58.348 39.130 0.00 0.00 0.00 1.85
5421 5640 5.256474 AGAATGTGTACCTGCAAGCTTAAT 58.744 37.500 0.00 0.00 0.00 1.40
5422 5641 4.970662 ATGTGTACCTGCAAGCTTAATG 57.029 40.909 0.00 0.00 0.00 1.90
5423 5642 4.014569 TGTGTACCTGCAAGCTTAATGA 57.985 40.909 0.00 0.00 0.00 2.57
5424 5643 4.393834 TGTGTACCTGCAAGCTTAATGAA 58.606 39.130 0.00 0.00 0.00 2.57
5425 5644 4.824537 TGTGTACCTGCAAGCTTAATGAAA 59.175 37.500 0.00 0.00 0.00 2.69
5426 5645 5.300539 TGTGTACCTGCAAGCTTAATGAAAA 59.699 36.000 0.00 0.00 0.00 2.29
5427 5646 5.629435 GTGTACCTGCAAGCTTAATGAAAAC 59.371 40.000 0.00 0.00 0.00 2.43
5428 5647 4.935352 ACCTGCAAGCTTAATGAAAACA 57.065 36.364 0.00 0.00 0.00 2.83
5429 5648 5.473066 ACCTGCAAGCTTAATGAAAACAT 57.527 34.783 0.00 0.00 0.00 2.71
5430 5649 5.857268 ACCTGCAAGCTTAATGAAAACATT 58.143 33.333 0.00 0.00 0.00 2.71
5431 5650 6.290605 ACCTGCAAGCTTAATGAAAACATTT 58.709 32.000 0.00 0.00 0.00 2.32
5432 5651 7.441017 ACCTGCAAGCTTAATGAAAACATTTA 58.559 30.769 0.00 0.00 0.00 1.40
5433 5652 7.930865 ACCTGCAAGCTTAATGAAAACATTTAA 59.069 29.630 0.00 0.00 0.00 1.52
5434 5653 8.938906 CCTGCAAGCTTAATGAAAACATTTAAT 58.061 29.630 0.00 0.00 0.00 1.40
5496 5715 9.740710 ACACTAATATTTATTTAGGGCATCTCC 57.259 33.333 0.00 0.00 0.00 3.71
5497 5716 9.739276 CACTAATATTTATTTAGGGCATCTCCA 57.261 33.333 0.00 0.00 36.21 3.86
5498 5717 9.965902 ACTAATATTTATTTAGGGCATCTCCAG 57.034 33.333 0.00 0.00 36.21 3.86
5499 5718 7.709149 AATATTTATTTAGGGCATCTCCAGC 57.291 36.000 0.00 0.00 36.21 4.85
5526 5745 3.083386 CCCAGGGGGCGTCTAAAA 58.917 61.111 0.00 0.00 35.35 1.52
5527 5746 1.077716 CCCAGGGGGCGTCTAAAAG 60.078 63.158 0.00 0.00 35.35 2.27
5528 5747 1.749258 CCAGGGGGCGTCTAAAAGC 60.749 63.158 0.00 0.00 0.00 3.51
5529 5748 2.106683 CAGGGGGCGTCTAAAAGCG 61.107 63.158 0.00 0.00 0.00 4.68
5534 5753 4.516135 GCGTCTAAAAGCGCCGCC 62.516 66.667 4.98 0.00 46.93 6.13
5535 5754 2.813908 CGTCTAAAAGCGCCGCCT 60.814 61.111 4.98 0.00 0.00 5.52
5536 5755 2.785258 GTCTAAAAGCGCCGCCTG 59.215 61.111 4.98 0.00 0.00 4.85
5537 5756 2.435938 TCTAAAAGCGCCGCCTGG 60.436 61.111 4.98 0.00 38.77 4.45
5538 5757 3.508840 CTAAAAGCGCCGCCTGGG 61.509 66.667 4.98 0.00 39.58 4.45
5556 5775 3.972276 GGTGAGCCGGCGCAAAAA 61.972 61.111 34.87 9.47 37.52 1.94
5609 5828 2.506962 CCCCCAGGCGCGTATTAA 59.493 61.111 8.43 0.00 0.00 1.40
5610 5829 1.153127 CCCCCAGGCGCGTATTAAA 60.153 57.895 8.43 0.00 0.00 1.52
5611 5830 1.164041 CCCCCAGGCGCGTATTAAAG 61.164 60.000 8.43 0.00 0.00 1.85
5612 5831 0.179067 CCCCAGGCGCGTATTAAAGA 60.179 55.000 8.43 0.00 0.00 2.52
5613 5832 1.658994 CCCAGGCGCGTATTAAAGAA 58.341 50.000 8.43 0.00 0.00 2.52
5614 5833 2.011222 CCCAGGCGCGTATTAAAGAAA 58.989 47.619 8.43 0.00 0.00 2.52
5615 5834 2.420722 CCCAGGCGCGTATTAAAGAAAA 59.579 45.455 8.43 0.00 0.00 2.29
5616 5835 3.422655 CCAGGCGCGTATTAAAGAAAAC 58.577 45.455 8.43 0.00 0.00 2.43
5617 5836 3.120130 CCAGGCGCGTATTAAAGAAAACA 60.120 43.478 8.43 0.00 0.00 2.83
5618 5837 4.468643 CAGGCGCGTATTAAAGAAAACAA 58.531 39.130 8.43 0.00 0.00 2.83
5619 5838 4.912766 CAGGCGCGTATTAAAGAAAACAAA 59.087 37.500 8.43 0.00 0.00 2.83
5620 5839 5.059221 CAGGCGCGTATTAAAGAAAACAAAG 59.941 40.000 8.43 0.00 0.00 2.77
5621 5840 4.322539 GGCGCGTATTAAAGAAAACAAAGG 59.677 41.667 8.43 0.00 0.00 3.11
5622 5841 5.148568 GCGCGTATTAAAGAAAACAAAGGA 58.851 37.500 8.43 0.00 0.00 3.36
5623 5842 5.058856 GCGCGTATTAAAGAAAACAAAGGAC 59.941 40.000 8.43 0.00 0.00 3.85
5624 5843 5.566395 CGCGTATTAAAGAAAACAAAGGACC 59.434 40.000 0.00 0.00 0.00 4.46
5625 5844 5.566395 GCGTATTAAAGAAAACAAAGGACCG 59.434 40.000 0.00 0.00 0.00 4.79
5626 5845 6.661669 CGTATTAAAGAAAACAAAGGACCGT 58.338 36.000 0.00 0.00 0.00 4.83
5627 5846 7.134163 CGTATTAAAGAAAACAAAGGACCGTT 58.866 34.615 0.00 0.00 0.00 4.44
5628 5847 7.321984 CGTATTAAAGAAAACAAAGGACCGTTC 59.678 37.037 0.00 0.00 0.00 3.95
5629 5848 3.685836 AAGAAAACAAAGGACCGTTCG 57.314 42.857 0.00 0.00 0.00 3.95
5630 5849 1.944709 AGAAAACAAAGGACCGTTCGG 59.055 47.619 9.81 9.81 0.00 4.30
5631 5850 0.382873 AAAACAAAGGACCGTTCGGC 59.617 50.000 11.32 4.36 0.00 5.54
5632 5851 1.778027 AAACAAAGGACCGTTCGGCG 61.778 55.000 11.32 0.00 40.95 6.46
5633 5852 2.356553 CAAAGGACCGTTCGGCGA 60.357 61.111 4.99 4.99 44.77 5.54
5634 5853 1.957186 CAAAGGACCGTTCGGCGAA 60.957 57.895 19.83 19.83 44.77 4.70
5635 5854 1.666872 AAAGGACCGTTCGGCGAAG 60.667 57.895 24.41 14.93 44.77 3.79
5636 5855 2.373434 AAAGGACCGTTCGGCGAAGT 62.373 55.000 24.41 18.34 44.77 3.01
5637 5856 2.356673 GGACCGTTCGGCGAAGTT 60.357 61.111 24.41 10.02 44.77 2.66
5638 5857 1.080569 GGACCGTTCGGCGAAGTTA 60.081 57.895 24.41 0.00 44.77 2.24
5639 5858 0.459063 GGACCGTTCGGCGAAGTTAT 60.459 55.000 24.41 8.97 44.77 1.89
5640 5859 0.643820 GACCGTTCGGCGAAGTTATG 59.356 55.000 24.41 11.83 44.77 1.90
5641 5860 0.244450 ACCGTTCGGCGAAGTTATGA 59.756 50.000 24.41 0.00 44.77 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.936847 TCTCCAGCTTACAAATCTAAACAAGAA 59.063 33.333 0.00 0.00 37.89 2.52
29 30 7.672983 TCTCCAGCTTACAAATCTAAACAAG 57.327 36.000 0.00 0.00 0.00 3.16
71 72 6.071672 TGCTACTCAATATCATCACTAGGCTC 60.072 42.308 0.00 0.00 0.00 4.70
149 150 4.501400 CCCTTGGTTAGGCAAAAAGAAGTG 60.501 45.833 0.00 0.00 43.27 3.16
195 196 8.620116 TCATGACTCAGAAAACAAATCATGTA 57.380 30.769 10.23 0.00 42.99 2.29
210 211 4.127907 CACATCCATTCCTCATGACTCAG 58.872 47.826 0.00 0.00 34.31 3.35
222 223 2.338577 ACTAGGCTGCACATCCATTC 57.661 50.000 0.50 0.00 0.00 2.67
234 235 9.397280 GAGGATTAAGAAAAACAATACTAGGCT 57.603 33.333 0.00 0.00 0.00 4.58
235 236 8.622157 GGAGGATTAAGAAAAACAATACTAGGC 58.378 37.037 0.00 0.00 0.00 3.93
238 239 9.681062 CCAGGAGGATTAAGAAAAACAATACTA 57.319 33.333 0.00 0.00 36.89 1.82
239 240 7.615757 CCCAGGAGGATTAAGAAAAACAATACT 59.384 37.037 0.00 0.00 38.24 2.12
240 241 7.147897 CCCCAGGAGGATTAAGAAAAACAATAC 60.148 40.741 0.00 0.00 38.24 1.89
244 245 4.107311 ACCCCAGGAGGATTAAGAAAAACA 59.893 41.667 1.11 0.00 38.24 2.83
278 279 5.557136 CGCTCTTTTCAGTAACTTGACACAG 60.557 44.000 0.00 0.00 0.00 3.66
301 303 5.927030 TGTTAAGCAAGTAATTCTTCTGCG 58.073 37.500 0.00 0.00 35.69 5.18
312 314 5.222079 TCTGGTCACATGTTAAGCAAGTA 57.778 39.130 0.00 0.00 0.00 2.24
340 342 1.737008 GAACCGGAGAACTGTCGCC 60.737 63.158 9.46 0.00 40.19 5.54
377 379 2.498885 GGGATTGCAAATCAAGAAGGCT 59.501 45.455 1.71 0.00 38.22 4.58
393 395 0.188342 ACAGCCAACCAACAGGGATT 59.812 50.000 0.00 0.00 41.15 3.01
394 396 0.540365 CACAGCCAACCAACAGGGAT 60.540 55.000 0.00 0.00 41.15 3.85
395 397 1.152777 CACAGCCAACCAACAGGGA 60.153 57.895 0.00 0.00 41.15 4.20
396 398 2.202395 CCACAGCCAACCAACAGGG 61.202 63.158 0.00 0.00 44.81 4.45
414 416 2.290641 ACTTGAACCGTGAAAGCACATC 59.709 45.455 0.00 0.00 45.41 3.06
449 451 8.230472 AGAATATTGCGATTTCCTTCTTTCAT 57.770 30.769 0.00 0.00 0.00 2.57
450 452 7.630242 AGAATATTGCGATTTCCTTCTTTCA 57.370 32.000 0.00 0.00 0.00 2.69
453 455 7.872113 AGAAGAATATTGCGATTTCCTTCTT 57.128 32.000 13.97 12.36 34.98 2.52
519 521 6.127168 ACCACTAATCAATCATTAGACGACCA 60.127 38.462 8.10 0.00 45.02 4.02
572 574 1.745087 ACGCCAGATAAACAATGCCTG 59.255 47.619 0.00 0.00 0.00 4.85
577 579 4.323417 TGAAGACACGCCAGATAAACAAT 58.677 39.130 0.00 0.00 0.00 2.71
585 587 2.416747 CATTTCTGAAGACACGCCAGA 58.583 47.619 0.00 0.00 35.38 3.86
586 588 1.466167 CCATTTCTGAAGACACGCCAG 59.534 52.381 0.00 0.00 0.00 4.85
645 647 5.010282 GTGATGTAAACACCCATCTTTCCT 58.990 41.667 0.00 0.00 32.93 3.36
695 697 1.371267 GGGTCGTTTGCGCCTTTTC 60.371 57.895 4.18 0.00 38.14 2.29
745 747 7.038231 AGGAAAGGCATAAAGTAACAGAGTACT 60.038 37.037 0.00 0.00 35.80 2.73
799 801 3.891049 AGCCAAGTATCCACAAAGATCC 58.109 45.455 0.00 0.00 0.00 3.36
820 822 5.950544 AGTACACATAAAGATGGTGCCTA 57.049 39.130 0.00 0.00 37.39 3.93
836 838 3.592059 TGGCCGAACAGATTTAGTACAC 58.408 45.455 0.00 0.00 0.00 2.90
879 881 2.686915 CTCCAAACAGATCATTGCCTCC 59.313 50.000 0.00 0.00 0.00 4.30
980 982 0.033504 GGAACAGTGCCTCGACTTCA 59.966 55.000 0.00 0.00 0.00 3.02
982 984 2.133195 TGGAACAGTGCCTCGACTT 58.867 52.632 0.00 0.00 0.00 3.01
1039 1041 3.378112 CCGGCAGCATAAAAGAAGAATGA 59.622 43.478 0.00 0.00 0.00 2.57
1040 1042 3.489738 CCCGGCAGCATAAAAGAAGAATG 60.490 47.826 0.00 0.00 0.00 2.67
1041 1043 2.689983 CCCGGCAGCATAAAAGAAGAAT 59.310 45.455 0.00 0.00 0.00 2.40
1042 1044 2.091541 CCCGGCAGCATAAAAGAAGAA 58.908 47.619 0.00 0.00 0.00 2.52
1043 1045 1.750193 CCCGGCAGCATAAAAGAAGA 58.250 50.000 0.00 0.00 0.00 2.87
1050 1052 4.504596 CTGGGCCCGGCAGCATAA 62.505 66.667 20.35 0.00 0.00 1.90
1058 1060 2.755469 CATTTGTCCTGGGCCCGG 60.755 66.667 25.29 25.29 0.00 5.73
1262 1264 7.394077 TCAAATCAATTTACTCAAGGATGCTCA 59.606 33.333 0.00 0.00 0.00 4.26
1475 1606 7.176589 AGGTGTAGAGTTCTAATTCTTCAGG 57.823 40.000 0.00 0.00 0.00 3.86
1476 1607 8.307483 TCAAGGTGTAGAGTTCTAATTCTTCAG 58.693 37.037 0.00 0.00 0.00 3.02
1477 1608 8.088981 GTCAAGGTGTAGAGTTCTAATTCTTCA 58.911 37.037 0.00 0.00 0.00 3.02
1478 1609 7.546316 GGTCAAGGTGTAGAGTTCTAATTCTTC 59.454 40.741 0.00 0.00 0.00 2.87
1479 1610 7.235812 AGGTCAAGGTGTAGAGTTCTAATTCTT 59.764 37.037 0.00 0.00 0.00 2.52
1480 1611 6.726764 AGGTCAAGGTGTAGAGTTCTAATTCT 59.273 38.462 0.00 0.00 0.00 2.40
1588 1723 1.666189 GAACATAGCAACCTCGAAGCC 59.334 52.381 0.00 0.00 0.00 4.35
1628 1763 1.184970 TCTGCTCATCCGTGACACCA 61.185 55.000 0.00 0.00 0.00 4.17
1693 1828 4.044065 TGGAAGTTGATAATCAAGGTGGGT 59.956 41.667 0.00 0.00 37.00 4.51
1818 1959 8.916062 ACCAATGATGCATATGATTTTAGTTCA 58.084 29.630 6.97 0.00 0.00 3.18
1840 1981 9.213777 ACTGATATACATAAAGAGAAGGACCAA 57.786 33.333 0.00 0.00 0.00 3.67
1921 2062 9.869667 AGATGTATTAGTACAATGAGTAGAGGT 57.130 33.333 1.86 0.00 43.60 3.85
1950 2091 2.591923 TGCACTTGCCTAAACAATCCA 58.408 42.857 0.00 0.00 41.18 3.41
1951 2092 3.193267 TCATGCACTTGCCTAAACAATCC 59.807 43.478 0.00 0.00 41.18 3.01
1952 2093 4.439305 TCATGCACTTGCCTAAACAATC 57.561 40.909 0.00 0.00 41.18 2.67
1953 2094 4.870123 TTCATGCACTTGCCTAAACAAT 57.130 36.364 0.00 0.00 41.18 2.71
2061 2202 5.696724 ACTAGTTGTCTGTGTGCAAGTAATC 59.303 40.000 0.00 0.00 32.27 1.75
2063 2204 5.018539 ACTAGTTGTCTGTGTGCAAGTAA 57.981 39.130 0.00 0.00 32.27 2.24
2092 2233 4.984295 TCAGTTCACATCTCCAAATCCAA 58.016 39.130 0.00 0.00 0.00 3.53
2189 2330 7.687941 TCTTGAAAATAATGACTTCAGACCC 57.312 36.000 0.00 0.00 31.11 4.46
2204 2345 8.417884 TCCTTTCCGTACAATTTTCTTGAAAAT 58.582 29.630 13.63 13.63 34.09 1.82
2220 2361 5.715279 TCTCTTTCTGATCTTCCTTTCCGTA 59.285 40.000 0.00 0.00 0.00 4.02
2222 2363 5.078411 TCTCTTTCTGATCTTCCTTTCCG 57.922 43.478 0.00 0.00 0.00 4.30
2346 2487 2.787601 TTAGCGTCGTGTGAAGAACT 57.212 45.000 0.00 0.00 0.00 3.01
2359 2500 3.738830 TTGGTAGTGACAGTTTAGCGT 57.261 42.857 0.00 0.00 0.00 5.07
2374 2515 5.686753 AGTTTGTACTGGTGTCATTTGGTA 58.313 37.500 0.00 0.00 31.99 3.25
2498 2639 0.921256 AAAGCCTCTGCCCATAGGGT 60.921 55.000 3.68 0.00 46.51 4.34
2590 2731 1.541147 TCTTTGCAGCAGTACCAATGC 59.459 47.619 0.00 6.80 44.18 3.56
2791 2932 5.824624 ACACTTTTTGATCTGAGCTGAGAAA 59.175 36.000 7.07 0.00 0.00 2.52
2882 3023 3.567164 CAGCAAGTTTCACATCTCCAACT 59.433 43.478 0.00 0.00 0.00 3.16
2914 3055 3.821033 ACCAGCAACCTCATTACAAGAAC 59.179 43.478 0.00 0.00 0.00 3.01
2946 3087 4.264460 ACTCTTCAAGTGACACAGGATC 57.736 45.455 8.59 0.00 36.65 3.36
3257 3410 4.039730 AGCAGAAGACTAAGAAGAGTGCAA 59.960 41.667 0.00 0.00 0.00 4.08
3280 3433 2.797491 CAATGTCGACGTCTGCTGATA 58.203 47.619 11.41 1.99 0.00 2.15
3286 3439 1.125021 GTTCTGCAATGTCGACGTCTG 59.875 52.381 11.41 12.21 0.00 3.51
3337 3490 0.323725 AGGTTGGGTGATGCATGACC 60.324 55.000 25.52 25.52 32.90 4.02
3368 3524 1.135859 GCCAGTTCTTCTGCAATGTCG 60.136 52.381 0.00 0.00 42.38 4.35
3413 3569 7.972277 ACTGATTTCAAAGAATCGAATGAATGG 59.028 33.333 0.00 0.00 38.57 3.16
3581 3737 5.733620 AAATCTCACCATTCAGCATTGTT 57.266 34.783 0.00 0.00 0.00 2.83
3675 3835 7.147915 TGCCATTCTGAAGTTCTGTTTTTAAGT 60.148 33.333 4.17 0.00 0.00 2.24
3676 3836 7.202526 TGCCATTCTGAAGTTCTGTTTTTAAG 58.797 34.615 4.17 0.00 0.00 1.85
3677 3837 7.106439 TGCCATTCTGAAGTTCTGTTTTTAA 57.894 32.000 4.17 0.00 0.00 1.52
3678 3838 6.707440 TGCCATTCTGAAGTTCTGTTTTTA 57.293 33.333 4.17 0.00 0.00 1.52
3679 3839 5.596836 TGCCATTCTGAAGTTCTGTTTTT 57.403 34.783 4.17 0.00 0.00 1.94
3680 3840 5.796424 ATGCCATTCTGAAGTTCTGTTTT 57.204 34.783 4.17 0.00 0.00 2.43
3681 3841 5.279156 GGAATGCCATTCTGAAGTTCTGTTT 60.279 40.000 16.51 0.00 39.24 2.83
3682 3842 4.219288 GGAATGCCATTCTGAAGTTCTGTT 59.781 41.667 16.51 0.00 39.24 3.16
3683 3843 3.760684 GGAATGCCATTCTGAAGTTCTGT 59.239 43.478 16.51 0.00 39.24 3.41
3684 3844 3.760151 TGGAATGCCATTCTGAAGTTCTG 59.240 43.478 16.51 3.79 39.92 3.02
3685 3845 4.038271 TGGAATGCCATTCTGAAGTTCT 57.962 40.909 16.51 0.00 39.92 3.01
3686 3846 4.789012 TTGGAATGCCATTCTGAAGTTC 57.211 40.909 16.51 0.00 45.46 3.01
3687 3847 4.344679 TGTTTGGAATGCCATTCTGAAGTT 59.655 37.500 16.51 0.00 45.46 2.66
3688 3848 3.896888 TGTTTGGAATGCCATTCTGAAGT 59.103 39.130 16.51 0.00 45.46 3.01
3689 3849 4.524316 TGTTTGGAATGCCATTCTGAAG 57.476 40.909 16.51 0.00 45.46 3.02
3690 3850 4.800249 GCTTGTTTGGAATGCCATTCTGAA 60.800 41.667 16.51 9.10 45.46 3.02
3705 3865 7.632721 AGTAAATTTCAATTGCTGCTTGTTTG 58.367 30.769 0.00 0.04 0.00 2.93
3741 3906 8.491152 CATTGATGACTCGGTAATAACTTCATC 58.509 37.037 0.00 0.00 38.79 2.92
3743 3908 7.552459 TCATTGATGACTCGGTAATAACTTCA 58.448 34.615 0.00 0.00 0.00 3.02
3744 3909 8.420374 TTCATTGATGACTCGGTAATAACTTC 57.580 34.615 0.00 0.00 36.36 3.01
3750 3923 8.335356 CGTTAATTTCATTGATGACTCGGTAAT 58.665 33.333 0.00 0.00 36.36 1.89
3751 3924 7.546316 TCGTTAATTTCATTGATGACTCGGTAA 59.454 33.333 0.00 0.00 36.36 2.85
3756 3929 7.042725 TCCGATCGTTAATTTCATTGATGACTC 60.043 37.037 15.09 0.00 36.36 3.36
3758 3931 6.943981 TCCGATCGTTAATTTCATTGATGAC 58.056 36.000 15.09 0.00 36.36 3.06
3760 3933 8.786937 AATTCCGATCGTTAATTTCATTGATG 57.213 30.769 15.09 0.00 0.00 3.07
3762 3935 8.208718 AGAATTCCGATCGTTAATTTCATTGA 57.791 30.769 20.22 3.40 0.00 2.57
3766 3939 7.603963 TCAAGAATTCCGATCGTTAATTTCA 57.396 32.000 20.22 7.90 0.00 2.69
3776 3949 9.273016 TCCATAGTAAATTCAAGAATTCCGATC 57.727 33.333 8.36 0.00 39.88 3.69
3777 3950 9.627123 TTCCATAGTAAATTCAAGAATTCCGAT 57.373 29.630 8.36 2.88 39.88 4.18
3778 3951 9.627123 ATTCCATAGTAAATTCAAGAATTCCGA 57.373 29.630 8.36 0.00 39.88 4.55
3798 3971 6.920569 AATAAGAAGTTACGCGAATTCCAT 57.079 33.333 15.93 1.14 0.00 3.41
3806 3979 9.968743 AAAGAGATTAAAATAAGAAGTTACGCG 57.031 29.630 3.53 3.53 0.00 6.01
3830 4003 3.486209 GCGAAACAGACGAACAGGAAAAA 60.486 43.478 0.00 0.00 0.00 1.94
3928 4101 4.997395 GGTTTGACAGAAGTGCTAGAATCA 59.003 41.667 0.00 0.00 0.00 2.57
3971 4144 5.654650 TCTCCTGAAGAAGTATGTTCTCCTC 59.345 44.000 0.00 0.00 30.44 3.71
3972 4145 5.584913 TCTCCTGAAGAAGTATGTTCTCCT 58.415 41.667 0.00 0.00 30.44 3.69
3983 4156 4.061596 GTGAGGTTGTTCTCCTGAAGAAG 58.938 47.826 0.00 0.00 44.66 2.85
3984 4157 3.181454 GGTGAGGTTGTTCTCCTGAAGAA 60.181 47.826 0.00 0.00 41.81 2.52
3985 4158 2.368875 GGTGAGGTTGTTCTCCTGAAGA 59.631 50.000 0.00 0.00 35.20 2.87
4012 4185 0.795085 CTGCTTCTTGGAGAGCGTTG 59.205 55.000 0.00 0.00 36.08 4.10
4035 4208 1.743772 CGGCCTCGTTCTTTGGATCAT 60.744 52.381 0.00 0.00 0.00 2.45
4036 4209 0.391130 CGGCCTCGTTCTTTGGATCA 60.391 55.000 0.00 0.00 0.00 2.92
4039 4212 1.292223 CTCGGCCTCGTTCTTTGGA 59.708 57.895 0.00 0.00 37.69 3.53
4063 4236 5.750484 TGTTGAATATGTCGTTGACGTAC 57.250 39.130 3.25 2.00 36.95 3.67
4228 4401 1.419374 CCTCGTTTGTCAGGTCGAAG 58.581 55.000 0.00 0.00 32.12 3.79
4258 4431 0.100146 CGGCGTAGTCCTTGTAGACC 59.900 60.000 0.00 0.00 37.49 3.85
4261 4434 1.226888 GGCGGCGTAGTCCTTGTAG 60.227 63.158 9.37 0.00 0.00 2.74
4307 4480 4.033776 CTTGGGCCGCTGGAAGGA 62.034 66.667 0.00 0.00 0.00 3.36
4450 4623 3.793144 CGGAAGTTGCTCCAGCGC 61.793 66.667 0.00 0.00 45.83 5.92
4501 4674 1.734477 CCTGTCGAGCACGGAGTTG 60.734 63.158 3.11 0.00 41.61 3.16
4572 4751 7.946776 AGGCAGAATAAATGAATGGCTAACTAT 59.053 33.333 0.00 0.00 43.99 2.12
4576 4755 5.221303 GCAGGCAGAATAAATGAATGGCTAA 60.221 40.000 0.00 0.00 44.00 3.09
4577 4756 4.279169 GCAGGCAGAATAAATGAATGGCTA 59.721 41.667 0.00 0.00 44.00 3.93
4851 5034 4.814771 AGACACTAGTACAAAACAAGTGCC 59.185 41.667 0.00 0.00 0.00 5.01
4856 5039 8.325421 TCAAAACAGACACTAGTACAAAACAA 57.675 30.769 0.00 0.00 0.00 2.83
4891 5075 6.575162 TCCAAGATTTTTCTTACCTGAAGC 57.425 37.500 0.00 0.00 34.87 3.86
4933 5117 0.250467 TGAGCAAGACCAGAAGGCAC 60.250 55.000 0.00 0.00 39.06 5.01
4976 5161 5.506317 GCCAATCAACCCAGAAGAATTATCG 60.506 44.000 0.00 0.00 0.00 2.92
5000 5185 9.549078 AAGAAGTAAAGACTAAAGACCAAGAAG 57.451 33.333 0.00 0.00 33.58 2.85
5056 5256 7.425224 TCAAAGTTTGATTTCACCCCTAAAA 57.575 32.000 14.35 0.00 34.08 1.52
5077 5277 6.148948 CGAACTGTGGCTTTTGATAAATCAA 58.851 36.000 1.23 1.23 44.42 2.57
5078 5278 5.240623 ACGAACTGTGGCTTTTGATAAATCA 59.759 36.000 0.00 0.00 34.44 2.57
5079 5279 5.569059 CACGAACTGTGGCTTTTGATAAATC 59.431 40.000 0.00 0.00 45.21 2.17
5080 5280 5.460646 CACGAACTGTGGCTTTTGATAAAT 58.539 37.500 0.00 0.00 45.21 1.40
5081 5281 4.854399 CACGAACTGTGGCTTTTGATAAA 58.146 39.130 0.00 0.00 45.21 1.40
5082 5282 4.481930 CACGAACTGTGGCTTTTGATAA 57.518 40.909 0.00 0.00 45.21 1.75
5093 5293 6.708422 ACAAACTTGTATCCCACGAACTGTG 61.708 44.000 0.00 0.00 43.30 3.66
5094 5294 3.764237 AACTTGTATCCCACGAACTGT 57.236 42.857 0.00 0.00 0.00 3.55
5095 5295 3.813166 ACAAACTTGTATCCCACGAACTG 59.187 43.478 0.00 0.00 40.16 3.16
5096 5296 4.062991 GACAAACTTGTATCCCACGAACT 58.937 43.478 0.00 0.00 42.43 3.01
5097 5297 3.187842 GGACAAACTTGTATCCCACGAAC 59.812 47.826 0.00 0.00 42.43 3.95
5098 5298 3.181453 TGGACAAACTTGTATCCCACGAA 60.181 43.478 0.00 0.00 42.43 3.85
5099 5299 2.369203 TGGACAAACTTGTATCCCACGA 59.631 45.455 0.00 0.00 42.43 4.35
5100 5300 2.773487 TGGACAAACTTGTATCCCACG 58.227 47.619 0.00 0.00 42.43 4.94
5101 5301 3.443681 CCATGGACAAACTTGTATCCCAC 59.556 47.826 5.56 0.00 42.43 4.61
5102 5302 3.563261 CCCATGGACAAACTTGTATCCCA 60.563 47.826 15.22 4.50 42.43 4.37
5103 5303 3.023832 CCCATGGACAAACTTGTATCCC 58.976 50.000 15.22 0.00 42.43 3.85
5104 5304 3.023832 CCCCATGGACAAACTTGTATCC 58.976 50.000 15.22 0.00 42.43 2.59
5105 5305 3.697166 ACCCCATGGACAAACTTGTATC 58.303 45.455 15.22 0.00 42.43 2.24
5106 5306 3.825908 ACCCCATGGACAAACTTGTAT 57.174 42.857 15.22 0.00 42.43 2.29
5107 5307 3.117474 TCAACCCCATGGACAAACTTGTA 60.117 43.478 15.22 0.00 42.43 2.41
5108 5308 2.038659 CAACCCCATGGACAAACTTGT 58.961 47.619 15.22 0.00 45.65 3.16
5109 5309 2.315176 TCAACCCCATGGACAAACTTG 58.685 47.619 15.22 5.14 34.81 3.16
5110 5310 2.765689 TCAACCCCATGGACAAACTT 57.234 45.000 15.22 0.00 34.81 2.66
5111 5311 2.765689 TTCAACCCCATGGACAAACT 57.234 45.000 15.22 0.00 34.81 2.66
5112 5312 2.896685 TGATTCAACCCCATGGACAAAC 59.103 45.455 15.22 0.00 34.81 2.93
5113 5313 3.164268 CTGATTCAACCCCATGGACAAA 58.836 45.455 15.22 0.22 34.81 2.83
5114 5314 2.806434 CTGATTCAACCCCATGGACAA 58.194 47.619 15.22 0.00 34.81 3.18
5115 5315 1.616725 GCTGATTCAACCCCATGGACA 60.617 52.381 15.22 0.00 34.81 4.02
5116 5316 1.106285 GCTGATTCAACCCCATGGAC 58.894 55.000 15.22 0.00 34.81 4.02
5117 5317 0.033208 GGCTGATTCAACCCCATGGA 60.033 55.000 15.22 0.00 34.81 3.41
5118 5318 0.324552 TGGCTGATTCAACCCCATGG 60.325 55.000 4.14 4.14 37.80 3.66
5119 5319 0.819582 GTGGCTGATTCAACCCCATG 59.180 55.000 3.69 0.00 0.00 3.66
5120 5320 0.409092 TGTGGCTGATTCAACCCCAT 59.591 50.000 3.69 0.00 0.00 4.00
5121 5321 0.539438 GTGTGGCTGATTCAACCCCA 60.539 55.000 3.69 0.00 0.00 4.96
5122 5322 0.539438 TGTGTGGCTGATTCAACCCC 60.539 55.000 3.69 0.00 0.00 4.95
5123 5323 1.203052 CATGTGTGGCTGATTCAACCC 59.797 52.381 3.69 0.46 0.00 4.11
5124 5324 1.203052 CCATGTGTGGCTGATTCAACC 59.797 52.381 0.00 0.00 39.01 3.77
5125 5325 2.642139 CCATGTGTGGCTGATTCAAC 57.358 50.000 0.00 0.00 39.01 3.18
5136 5336 0.376152 GATCAGAAGCGCCATGTGTG 59.624 55.000 2.29 0.00 0.00 3.82
5137 5337 0.251354 AGATCAGAAGCGCCATGTGT 59.749 50.000 2.29 0.00 0.00 3.72
5138 5338 2.229675 TAGATCAGAAGCGCCATGTG 57.770 50.000 2.29 2.07 0.00 3.21
5139 5339 2.988010 TTAGATCAGAAGCGCCATGT 57.012 45.000 2.29 0.00 0.00 3.21
5140 5340 3.461061 TCTTTAGATCAGAAGCGCCATG 58.539 45.455 2.29 0.00 0.00 3.66
5141 5341 3.827008 TCTTTAGATCAGAAGCGCCAT 57.173 42.857 2.29 0.00 0.00 4.40
5142 5342 3.195610 TCTTCTTTAGATCAGAAGCGCCA 59.804 43.478 2.29 0.00 44.83 5.69
5143 5343 3.786635 TCTTCTTTAGATCAGAAGCGCC 58.213 45.455 2.29 0.00 44.83 6.53
5144 5344 4.677584 TCTCTTCTTTAGATCAGAAGCGC 58.322 43.478 13.81 0.00 44.83 5.92
5145 5345 7.769272 ATTTCTCTTCTTTAGATCAGAAGCG 57.231 36.000 13.81 9.61 44.83 4.68
5167 5367 8.957466 GGTGGAACTCATAGTTTAGCTAAAATT 58.043 33.333 22.74 15.10 38.80 1.82
5168 5368 8.107095 TGGTGGAACTCATAGTTTAGCTAAAAT 58.893 33.333 21.48 21.48 38.80 1.82
5169 5369 7.455058 TGGTGGAACTCATAGTTTAGCTAAAA 58.545 34.615 20.22 6.77 38.80 1.52
5170 5370 7.011499 TGGTGGAACTCATAGTTTAGCTAAA 57.989 36.000 14.96 14.96 38.80 1.85
5171 5371 6.614694 TGGTGGAACTCATAGTTTAGCTAA 57.385 37.500 0.86 0.86 38.80 3.09
5172 5372 6.808321 ATGGTGGAACTCATAGTTTAGCTA 57.192 37.500 0.00 0.00 38.80 3.32
5173 5373 5.700402 ATGGTGGAACTCATAGTTTAGCT 57.300 39.130 0.00 0.00 38.80 3.32
5174 5374 6.555315 CAAATGGTGGAACTCATAGTTTAGC 58.445 40.000 0.00 0.00 38.80 3.09
5175 5375 6.404734 GGCAAATGGTGGAACTCATAGTTTAG 60.405 42.308 0.00 0.00 38.80 1.85
5176 5376 5.417580 GGCAAATGGTGGAACTCATAGTTTA 59.582 40.000 0.00 0.00 38.80 2.01
5177 5377 4.220602 GGCAAATGGTGGAACTCATAGTTT 59.779 41.667 0.00 0.00 38.80 2.66
5178 5378 3.763897 GGCAAATGGTGGAACTCATAGTT 59.236 43.478 0.00 0.00 41.95 2.24
5179 5379 3.356290 GGCAAATGGTGGAACTCATAGT 58.644 45.455 0.00 0.00 36.74 2.12
5180 5380 2.355756 CGGCAAATGGTGGAACTCATAG 59.644 50.000 0.00 0.00 36.74 2.23
5181 5381 2.026729 TCGGCAAATGGTGGAACTCATA 60.027 45.455 0.00 0.00 36.74 2.15
5182 5382 1.176527 CGGCAAATGGTGGAACTCAT 58.823 50.000 0.00 0.00 36.74 2.90
5183 5383 0.109532 TCGGCAAATGGTGGAACTCA 59.890 50.000 0.00 0.00 36.74 3.41
5184 5384 1.068541 GTTCGGCAAATGGTGGAACTC 60.069 52.381 0.00 0.00 36.74 3.01
5185 5385 0.958822 GTTCGGCAAATGGTGGAACT 59.041 50.000 0.00 0.00 36.74 3.01
5186 5386 0.958822 AGTTCGGCAAATGGTGGAAC 59.041 50.000 0.00 0.00 37.77 3.62
5187 5387 0.958091 CAGTTCGGCAAATGGTGGAA 59.042 50.000 0.00 0.00 0.00 3.53
5188 5388 0.893270 CCAGTTCGGCAAATGGTGGA 60.893 55.000 7.64 0.00 41.96 4.02
5189 5389 1.586028 CCAGTTCGGCAAATGGTGG 59.414 57.895 7.64 0.00 41.96 4.61
5193 5393 2.422597 TCACTACCAGTTCGGCAAATG 58.577 47.619 0.00 0.00 39.03 2.32
5194 5394 2.851263 TCACTACCAGTTCGGCAAAT 57.149 45.000 0.00 0.00 39.03 2.32
5195 5395 2.037902 TGATCACTACCAGTTCGGCAAA 59.962 45.455 0.00 0.00 39.03 3.68
5196 5396 1.621317 TGATCACTACCAGTTCGGCAA 59.379 47.619 0.00 0.00 39.03 4.52
5197 5397 1.067142 GTGATCACTACCAGTTCGGCA 60.067 52.381 18.83 0.00 39.03 5.69
5198 5398 1.641577 GTGATCACTACCAGTTCGGC 58.358 55.000 18.83 0.00 39.03 5.54
5199 5399 1.469251 CGGTGATCACTACCAGTTCGG 60.469 57.143 24.50 0.00 38.11 4.30
5200 5400 1.471287 TCGGTGATCACTACCAGTTCG 59.529 52.381 24.50 16.38 38.11 3.95
5201 5401 2.753452 TCTCGGTGATCACTACCAGTTC 59.247 50.000 24.50 5.20 38.11 3.01
5202 5402 2.755655 CTCTCGGTGATCACTACCAGTT 59.244 50.000 24.50 0.00 38.11 3.16
5203 5403 2.026169 TCTCTCGGTGATCACTACCAGT 60.026 50.000 24.50 0.00 38.11 4.00
5204 5404 2.616376 CTCTCTCGGTGATCACTACCAG 59.384 54.545 24.50 15.24 38.11 4.00
5205 5405 2.644676 CTCTCTCGGTGATCACTACCA 58.355 52.381 24.50 6.83 38.11 3.25
5206 5406 1.950909 CCTCTCTCGGTGATCACTACC 59.049 57.143 24.50 8.26 34.81 3.18
5207 5407 1.335496 GCCTCTCTCGGTGATCACTAC 59.665 57.143 24.50 8.80 0.00 2.73
5208 5408 1.213182 AGCCTCTCTCGGTGATCACTA 59.787 52.381 24.50 12.65 0.00 2.74
5213 5413 1.039068 CATGAGCCTCTCTCGGTGAT 58.961 55.000 0.00 0.00 44.86 3.06
5232 5432 2.614057 CCACGATGAACCCATTTCTAGC 59.386 50.000 0.00 0.00 34.97 3.42
5233 5433 2.614057 GCCACGATGAACCCATTTCTAG 59.386 50.000 0.00 0.00 34.97 2.43
5234 5434 2.639065 GCCACGATGAACCCATTTCTA 58.361 47.619 0.00 0.00 34.97 2.10
5260 5460 2.434774 GACGGGTTCAAGGCCCTT 59.565 61.111 0.00 0.00 43.92 3.95
5261 5461 2.852075 TGACGGGTTCAAGGCCCT 60.852 61.111 0.00 0.00 43.92 5.19
5265 5465 4.379174 CTGGTGACGGGTTCAAGG 57.621 61.111 0.00 0.00 35.39 3.61
5274 5474 0.250234 ACATCATGGACCTGGTGACG 59.750 55.000 2.82 0.00 31.49 4.35
5275 5475 1.407437 GGACATCATGGACCTGGTGAC 60.407 57.143 2.82 0.00 31.49 3.67
5284 5503 0.703488 TTTGGGCTGGACATCATGGA 59.297 50.000 0.00 0.00 0.00 3.41
5313 5532 1.566231 CCCTTACTCCCAAAGCCTGAT 59.434 52.381 0.00 0.00 0.00 2.90
5314 5533 0.991920 CCCTTACTCCCAAAGCCTGA 59.008 55.000 0.00 0.00 0.00 3.86
5315 5534 0.034089 CCCCTTACTCCCAAAGCCTG 60.034 60.000 0.00 0.00 0.00 4.85
5316 5535 1.214992 CCCCCTTACTCCCAAAGCCT 61.215 60.000 0.00 0.00 0.00 4.58
5317 5536 1.306633 CCCCCTTACTCCCAAAGCC 59.693 63.158 0.00 0.00 0.00 4.35
5336 5555 1.331756 CATATCTTGGTGTGGCTTCGC 59.668 52.381 0.00 0.00 0.00 4.70
5337 5556 1.942657 CCATATCTTGGTGTGGCTTCG 59.057 52.381 0.00 0.00 40.99 3.79
5338 5557 2.301346 CCCATATCTTGGTGTGGCTTC 58.699 52.381 0.00 0.00 44.83 3.86
5339 5558 1.640670 ACCCATATCTTGGTGTGGCTT 59.359 47.619 0.00 0.00 44.83 4.35
5340 5559 1.064463 CACCCATATCTTGGTGTGGCT 60.064 52.381 7.22 0.00 45.61 4.75
5341 5560 1.392589 CACCCATATCTTGGTGTGGC 58.607 55.000 7.22 0.00 45.61 5.01
5346 5565 5.826643 ACATTTGTACACCCATATCTTGGT 58.173 37.500 0.00 0.00 44.83 3.67
5361 5580 6.072618 CCACAATTAACGGGTGTACATTTGTA 60.073 38.462 0.00 0.00 0.00 2.41
5362 5581 5.278561 CCACAATTAACGGGTGTACATTTGT 60.279 40.000 0.00 0.00 0.00 2.83
5363 5582 5.157781 CCACAATTAACGGGTGTACATTTG 58.842 41.667 0.00 0.00 0.00 2.32
5364 5583 4.321378 GCCACAATTAACGGGTGTACATTT 60.321 41.667 0.00 0.00 0.00 2.32
5365 5584 3.191791 GCCACAATTAACGGGTGTACATT 59.808 43.478 0.00 0.00 0.00 2.71
5366 5585 2.750712 GCCACAATTAACGGGTGTACAT 59.249 45.455 0.00 0.00 0.00 2.29
5367 5586 2.152830 GCCACAATTAACGGGTGTACA 58.847 47.619 0.00 0.00 0.00 2.90
5368 5587 2.417586 GAGCCACAATTAACGGGTGTAC 59.582 50.000 0.00 0.00 0.00 2.90
5369 5588 2.303600 AGAGCCACAATTAACGGGTGTA 59.696 45.455 0.00 0.00 0.00 2.90
5370 5589 1.073284 AGAGCCACAATTAACGGGTGT 59.927 47.619 0.00 0.00 0.00 4.16
5371 5590 1.737793 GAGAGCCACAATTAACGGGTG 59.262 52.381 0.00 0.00 0.00 4.61
5372 5591 1.349688 TGAGAGCCACAATTAACGGGT 59.650 47.619 0.00 0.00 0.00 5.28
5373 5592 1.737793 GTGAGAGCCACAATTAACGGG 59.262 52.381 0.00 0.00 45.03 5.28
5383 5602 2.271800 CATTCTTACGGTGAGAGCCAC 58.728 52.381 2.74 0.00 44.95 5.01
5384 5603 1.899814 ACATTCTTACGGTGAGAGCCA 59.100 47.619 2.74 0.00 0.00 4.75
5385 5604 2.271800 CACATTCTTACGGTGAGAGCC 58.728 52.381 2.74 0.00 34.52 4.70
5386 5605 2.960819 ACACATTCTTACGGTGAGAGC 58.039 47.619 2.74 0.00 36.42 4.09
5387 5606 4.158025 AGGTACACATTCTTACGGTGAGAG 59.842 45.833 2.74 0.00 36.42 3.20
5388 5607 4.082408 CAGGTACACATTCTTACGGTGAGA 60.082 45.833 0.00 0.00 36.42 3.27
5389 5608 4.174009 CAGGTACACATTCTTACGGTGAG 58.826 47.826 0.00 0.00 36.42 3.51
5390 5609 3.615592 GCAGGTACACATTCTTACGGTGA 60.616 47.826 0.00 0.00 36.42 4.02
5391 5610 2.671396 GCAGGTACACATTCTTACGGTG 59.329 50.000 0.00 0.00 38.47 4.94
5392 5611 2.300723 TGCAGGTACACATTCTTACGGT 59.699 45.455 0.00 0.00 0.00 4.83
5393 5612 2.967362 TGCAGGTACACATTCTTACGG 58.033 47.619 0.00 0.00 0.00 4.02
5394 5613 3.181520 GCTTGCAGGTACACATTCTTACG 60.182 47.826 0.00 0.00 0.00 3.18
5395 5614 4.003648 AGCTTGCAGGTACACATTCTTAC 58.996 43.478 0.00 0.00 0.00 2.34
5396 5615 4.286297 AGCTTGCAGGTACACATTCTTA 57.714 40.909 0.00 0.00 0.00 2.10
5397 5616 3.146104 AGCTTGCAGGTACACATTCTT 57.854 42.857 0.00 0.00 0.00 2.52
5398 5617 2.867109 AGCTTGCAGGTACACATTCT 57.133 45.000 0.00 0.00 0.00 2.40
5399 5618 5.123820 TCATTAAGCTTGCAGGTACACATTC 59.876 40.000 9.86 0.00 0.00 2.67
5400 5619 5.009631 TCATTAAGCTTGCAGGTACACATT 58.990 37.500 9.86 0.00 0.00 2.71
5401 5620 4.588899 TCATTAAGCTTGCAGGTACACAT 58.411 39.130 9.86 0.00 0.00 3.21
5402 5621 4.014569 TCATTAAGCTTGCAGGTACACA 57.985 40.909 9.86 0.00 0.00 3.72
5403 5622 5.371115 TTTCATTAAGCTTGCAGGTACAC 57.629 39.130 9.86 0.00 0.00 2.90
5404 5623 5.300539 TGTTTTCATTAAGCTTGCAGGTACA 59.699 36.000 9.86 2.80 0.00 2.90
5405 5624 5.768317 TGTTTTCATTAAGCTTGCAGGTAC 58.232 37.500 9.86 0.12 0.00 3.34
5406 5625 6.588719 ATGTTTTCATTAAGCTTGCAGGTA 57.411 33.333 9.86 0.00 37.19 3.08
5407 5626 4.935352 TGTTTTCATTAAGCTTGCAGGT 57.065 36.364 9.86 0.00 0.00 4.00
5470 5689 9.740710 GGAGATGCCCTAAATAAATATTAGTGT 57.259 33.333 0.00 0.00 0.00 3.55
5471 5690 9.739276 TGGAGATGCCCTAAATAAATATTAGTG 57.261 33.333 0.00 0.00 34.97 2.74
5472 5691 9.965902 CTGGAGATGCCCTAAATAAATATTAGT 57.034 33.333 0.00 0.00 34.97 2.24
5473 5692 8.897752 GCTGGAGATGCCCTAAATAAATATTAG 58.102 37.037 0.00 0.00 34.97 1.73
5474 5693 7.834181 GGCTGGAGATGCCCTAAATAAATATTA 59.166 37.037 0.00 0.00 44.32 0.98
5475 5694 6.665248 GGCTGGAGATGCCCTAAATAAATATT 59.335 38.462 0.00 0.00 44.32 1.28
5476 5695 6.190587 GGCTGGAGATGCCCTAAATAAATAT 58.809 40.000 0.00 0.00 44.32 1.28
5477 5696 5.570320 GGCTGGAGATGCCCTAAATAAATA 58.430 41.667 0.00 0.00 44.32 1.40
5478 5697 4.411013 GGCTGGAGATGCCCTAAATAAAT 58.589 43.478 0.00 0.00 44.32 1.40
5479 5698 3.832527 GGCTGGAGATGCCCTAAATAAA 58.167 45.455 0.00 0.00 44.32 1.40
5480 5699 3.508845 GGCTGGAGATGCCCTAAATAA 57.491 47.619 0.00 0.00 44.32 1.40
5510 5729 1.749258 GCTTTTAGACGCCCCCTGG 60.749 63.158 0.00 0.00 0.00 4.45
5511 5730 2.106683 CGCTTTTAGACGCCCCCTG 61.107 63.158 0.00 0.00 0.00 4.45
5512 5731 2.267961 CGCTTTTAGACGCCCCCT 59.732 61.111 0.00 0.00 0.00 4.79
5518 5737 2.813908 AGGCGGCGCTTTTAGACG 60.814 61.111 32.30 0.56 0.00 4.18
5519 5738 2.750888 CCAGGCGGCGCTTTTAGAC 61.751 63.158 32.30 13.09 0.00 2.59
5520 5739 2.435938 CCAGGCGGCGCTTTTAGA 60.436 61.111 32.30 0.00 0.00 2.10
5521 5740 3.508840 CCCAGGCGGCGCTTTTAG 61.509 66.667 32.30 14.75 0.00 1.85
5539 5758 3.972276 TTTTTGCGCCGGCTCACC 61.972 61.111 26.68 10.54 40.82 4.02
5592 5811 1.153127 TTTAATACGCGCCTGGGGG 60.153 57.895 5.73 5.39 0.00 5.40
5593 5812 0.179067 TCTTTAATACGCGCCTGGGG 60.179 55.000 5.73 6.36 0.00 4.96
5594 5813 1.658994 TTCTTTAATACGCGCCTGGG 58.341 50.000 5.73 0.00 0.00 4.45
5595 5814 3.120130 TGTTTTCTTTAATACGCGCCTGG 60.120 43.478 5.73 0.00 0.00 4.45
5596 5815 4.073169 TGTTTTCTTTAATACGCGCCTG 57.927 40.909 5.73 0.00 0.00 4.85
5597 5816 4.752661 TTGTTTTCTTTAATACGCGCCT 57.247 36.364 5.73 0.00 0.00 5.52
5598 5817 4.322539 CCTTTGTTTTCTTTAATACGCGCC 59.677 41.667 5.73 0.00 0.00 6.53
5599 5818 5.058856 GTCCTTTGTTTTCTTTAATACGCGC 59.941 40.000 5.73 0.00 0.00 6.86
5600 5819 5.566395 GGTCCTTTGTTTTCTTTAATACGCG 59.434 40.000 3.53 3.53 0.00 6.01
5601 5820 5.566395 CGGTCCTTTGTTTTCTTTAATACGC 59.434 40.000 0.00 0.00 0.00 4.42
5602 5821 6.661669 ACGGTCCTTTGTTTTCTTTAATACG 58.338 36.000 0.00 0.00 0.00 3.06
5603 5822 7.321984 CGAACGGTCCTTTGTTTTCTTTAATAC 59.678 37.037 0.00 0.00 0.00 1.89
5604 5823 7.354257 CGAACGGTCCTTTGTTTTCTTTAATA 58.646 34.615 0.00 0.00 0.00 0.98
5605 5824 6.203647 CGAACGGTCCTTTGTTTTCTTTAAT 58.796 36.000 0.00 0.00 0.00 1.40
5606 5825 5.448904 CCGAACGGTCCTTTGTTTTCTTTAA 60.449 40.000 4.99 0.00 0.00 1.52
5607 5826 4.035441 CCGAACGGTCCTTTGTTTTCTTTA 59.965 41.667 4.99 0.00 0.00 1.85
5608 5827 3.181494 CCGAACGGTCCTTTGTTTTCTTT 60.181 43.478 4.99 0.00 0.00 2.52
5609 5828 2.356695 CCGAACGGTCCTTTGTTTTCTT 59.643 45.455 4.99 0.00 0.00 2.52
5610 5829 1.944709 CCGAACGGTCCTTTGTTTTCT 59.055 47.619 4.99 0.00 0.00 2.52
5611 5830 1.598676 GCCGAACGGTCCTTTGTTTTC 60.599 52.381 14.63 0.00 37.65 2.29
5612 5831 0.382873 GCCGAACGGTCCTTTGTTTT 59.617 50.000 14.63 0.00 37.65 2.43
5613 5832 1.778027 CGCCGAACGGTCCTTTGTTT 61.778 55.000 14.63 0.00 38.44 2.83
5614 5833 2.248835 CGCCGAACGGTCCTTTGTT 61.249 57.895 14.63 0.00 38.44 2.83
5615 5834 2.647680 TTCGCCGAACGGTCCTTTGT 62.648 55.000 14.63 0.00 43.89 2.83
5616 5835 1.897398 CTTCGCCGAACGGTCCTTTG 61.897 60.000 14.63 0.00 43.89 2.77
5617 5836 1.666872 CTTCGCCGAACGGTCCTTT 60.667 57.895 14.63 0.00 43.89 3.11
5618 5837 2.048503 CTTCGCCGAACGGTCCTT 60.049 61.111 14.63 0.00 43.89 3.36
5619 5838 1.526575 TAACTTCGCCGAACGGTCCT 61.527 55.000 14.63 0.00 43.89 3.85
5620 5839 0.459063 ATAACTTCGCCGAACGGTCC 60.459 55.000 14.63 0.00 43.89 4.46
5621 5840 0.643820 CATAACTTCGCCGAACGGTC 59.356 55.000 14.63 0.00 43.89 4.79
5622 5841 0.244450 TCATAACTTCGCCGAACGGT 59.756 50.000 14.63 0.00 43.89 4.83
5623 5842 3.038946 TCATAACTTCGCCGAACGG 57.961 52.632 9.00 9.00 43.89 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.