Multiple sequence alignment - TraesCS3A01G072200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G072200 chr3A 100.000 2975 0 0 1 2975 44604481 44607455 0.000000e+00 5494.0
1 TraesCS3A01G072200 chr3D 93.843 1608 85 5 1371 2975 32206638 32208234 0.000000e+00 2409.0
2 TraesCS3A01G072200 chr3D 94.576 295 16 0 1089 1383 32193610 32193904 9.720000e-125 457.0
3 TraesCS3A01G072200 chr5D 78.804 1906 377 24 1082 2972 555906832 555908725 0.000000e+00 1256.0
4 TraesCS3A01G072200 chr5D 78.307 1890 388 19 1094 2970 464701103 464699223 0.000000e+00 1199.0
5 TraesCS3A01G072200 chr5D 77.421 1900 395 30 1092 2972 555555607 555557491 0.000000e+00 1101.0
6 TraesCS3A01G072200 chr5D 75.663 1849 421 26 1093 2925 555046153 555047988 0.000000e+00 894.0
7 TraesCS3A01G072200 chr5D 76.603 889 187 17 2095 2973 555488301 555489178 1.250000e-128 470.0
8 TraesCS3A01G072200 chr5D 84.665 463 58 7 304 759 47856024 47856480 1.630000e-122 449.0
9 TraesCS3A01G072200 chr5D 75.820 579 108 24 198 765 559230676 559230119 6.320000e-67 265.0
10 TraesCS3A01G072200 chr5B 78.643 1901 376 26 1092 2975 695814309 695812422 0.000000e+00 1234.0
11 TraesCS3A01G072200 chr5B 78.343 1907 374 32 1092 2975 695493791 695491901 0.000000e+00 1197.0
12 TraesCS3A01G072200 chr5B 78.113 1887 389 21 1091 2963 571606189 571608065 0.000000e+00 1175.0
13 TraesCS3A01G072200 chr5B 79.072 1185 225 21 1799 2970 695695979 695694805 0.000000e+00 793.0
14 TraesCS3A01G072200 chr5B 75.323 1394 317 21 1093 2472 695894141 695892761 0.000000e+00 643.0
15 TraesCS3A01G072200 chr5A 78.155 1854 381 21 1127 2966 585201769 585199926 0.000000e+00 1158.0
16 TraesCS3A01G072200 chr1B 76.042 1632 366 21 1357 2975 433644457 433642838 0.000000e+00 824.0
17 TraesCS3A01G072200 chr1A 77.778 873 184 8 1117 1982 402209005 402209874 2.030000e-146 529.0
18 TraesCS3A01G072200 chr1A 75.884 792 172 13 2077 2861 402216066 402216845 1.290000e-103 387.0
19 TraesCS3A01G072200 chr6B 75.643 583 97 33 185 757 681321338 681320791 6.370000e-62 248.0
20 TraesCS3A01G072200 chr6B 73.773 591 128 21 185 758 665497927 665497347 1.080000e-49 207.0
21 TraesCS3A01G072200 chr4A 74.826 576 113 21 198 764 612679182 612679734 6.410000e-57 231.0
22 TraesCS3A01G072200 chr4A 79.670 182 26 10 214 389 589876494 589876670 1.450000e-23 121.0
23 TraesCS3A01G072200 chr2B 73.632 603 107 32 179 758 425343914 425344487 5.060000e-43 185.0
24 TraesCS3A01G072200 chr2B 86.400 125 15 2 638 761 212558819 212558942 5.170000e-28 135.0
25 TraesCS3A01G072200 chr7A 73.879 513 108 18 267 763 39272636 39272134 6.550000e-42 182.0
26 TraesCS3A01G072200 chr7D 73.116 584 117 32 186 758 597067759 597068313 3.940000e-39 172.0
27 TraesCS3A01G072200 chr7D 86.777 121 11 5 643 761 601919604 601919487 2.410000e-26 130.0
28 TraesCS3A01G072200 chr1D 73.581 511 110 19 263 759 397053716 397053217 3.940000e-39 172.0
29 TraesCS3A01G072200 chr6A 79.909 219 44 0 2757 2975 584948982 584948764 8.530000e-36 161.0
30 TraesCS3A01G072200 chr6D 97.143 35 1 0 2941 2975 436739065 436739031 3.200000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G072200 chr3A 44604481 44607455 2974 False 5494 5494 100.000 1 2975 1 chr3A.!!$F1 2974
1 TraesCS3A01G072200 chr3D 32206638 32208234 1596 False 2409 2409 93.843 1371 2975 1 chr3D.!!$F2 1604
2 TraesCS3A01G072200 chr5D 555906832 555908725 1893 False 1256 1256 78.804 1082 2972 1 chr5D.!!$F5 1890
3 TraesCS3A01G072200 chr5D 464699223 464701103 1880 True 1199 1199 78.307 1094 2970 1 chr5D.!!$R1 1876
4 TraesCS3A01G072200 chr5D 555555607 555557491 1884 False 1101 1101 77.421 1092 2972 1 chr5D.!!$F4 1880
5 TraesCS3A01G072200 chr5D 555046153 555047988 1835 False 894 894 75.663 1093 2925 1 chr5D.!!$F2 1832
6 TraesCS3A01G072200 chr5D 555488301 555489178 877 False 470 470 76.603 2095 2973 1 chr5D.!!$F3 878
7 TraesCS3A01G072200 chr5D 559230119 559230676 557 True 265 265 75.820 198 765 1 chr5D.!!$R2 567
8 TraesCS3A01G072200 chr5B 695812422 695814309 1887 True 1234 1234 78.643 1092 2975 1 chr5B.!!$R3 1883
9 TraesCS3A01G072200 chr5B 695491901 695493791 1890 True 1197 1197 78.343 1092 2975 1 chr5B.!!$R1 1883
10 TraesCS3A01G072200 chr5B 571606189 571608065 1876 False 1175 1175 78.113 1091 2963 1 chr5B.!!$F1 1872
11 TraesCS3A01G072200 chr5B 695694805 695695979 1174 True 793 793 79.072 1799 2970 1 chr5B.!!$R2 1171
12 TraesCS3A01G072200 chr5B 695892761 695894141 1380 True 643 643 75.323 1093 2472 1 chr5B.!!$R4 1379
13 TraesCS3A01G072200 chr5A 585199926 585201769 1843 True 1158 1158 78.155 1127 2966 1 chr5A.!!$R1 1839
14 TraesCS3A01G072200 chr1B 433642838 433644457 1619 True 824 824 76.042 1357 2975 1 chr1B.!!$R1 1618
15 TraesCS3A01G072200 chr1A 402209005 402209874 869 False 529 529 77.778 1117 1982 1 chr1A.!!$F1 865
16 TraesCS3A01G072200 chr1A 402216066 402216845 779 False 387 387 75.884 2077 2861 1 chr1A.!!$F2 784
17 TraesCS3A01G072200 chr6B 681320791 681321338 547 True 248 248 75.643 185 757 1 chr6B.!!$R2 572
18 TraesCS3A01G072200 chr6B 665497347 665497927 580 True 207 207 73.773 185 758 1 chr6B.!!$R1 573
19 TraesCS3A01G072200 chr4A 612679182 612679734 552 False 231 231 74.826 198 764 1 chr4A.!!$F2 566

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
155 156 0.106268 TTTGGTGGTGCATGTGACCT 60.106 50.0 14.82 0.0 34.26 3.85 F
910 926 0.165079 AAAAACGTATGCTCGCCGTG 59.835 50.0 0.00 0.0 34.62 4.94 F
1023 1039 0.103937 CCGCTCTCTCATCACCTTCC 59.896 60.0 0.00 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1004 1020 0.103937 GGAAGGTGATGAGAGAGCGG 59.896 60.000 0.00 0.00 0.00 5.52 R
1898 1924 0.304705 GTACCGGCATGATTCAAGCG 59.695 55.000 0.00 3.87 0.00 4.68 R
2072 2099 1.476085 AGACTGCAGTTGGAGAGATCG 59.524 52.381 22.65 0.00 36.93 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.340789 AAAGTCGAAACGGGCAGC 58.659 55.556 0.00 0.00 0.00 5.25
18 19 2.258726 AAAGTCGAAACGGGCAGCC 61.259 57.895 1.26 1.26 0.00 4.85
19 20 4.699522 AGTCGAAACGGGCAGCCC 62.700 66.667 22.33 22.33 41.09 5.19
34 35 3.646715 CCCGGCCTTTCCCAGTCA 61.647 66.667 0.00 0.00 0.00 3.41
35 36 2.677228 CCGGCCTTTCCCAGTCAT 59.323 61.111 0.00 0.00 0.00 3.06
36 37 1.750399 CCGGCCTTTCCCAGTCATG 60.750 63.158 0.00 0.00 0.00 3.07
37 38 1.002134 CGGCCTTTCCCAGTCATGT 60.002 57.895 0.00 0.00 0.00 3.21
38 39 1.026718 CGGCCTTTCCCAGTCATGTC 61.027 60.000 0.00 0.00 0.00 3.06
39 40 0.329596 GGCCTTTCCCAGTCATGTCT 59.670 55.000 0.00 0.00 0.00 3.41
40 41 1.457346 GCCTTTCCCAGTCATGTCTG 58.543 55.000 12.40 12.40 35.45 3.51
54 55 8.818141 CAGTCATGTCTGGACGTAAATATATT 57.182 34.615 11.62 0.00 40.20 1.28
55 56 8.916654 CAGTCATGTCTGGACGTAAATATATTC 58.083 37.037 11.62 0.00 40.20 1.75
56 57 8.861086 AGTCATGTCTGGACGTAAATATATTCT 58.139 33.333 0.00 0.00 40.20 2.40
57 58 9.130312 GTCATGTCTGGACGTAAATATATTCTC 57.870 37.037 0.00 0.00 0.00 2.87
58 59 8.856103 TCATGTCTGGACGTAAATATATTCTCA 58.144 33.333 0.00 0.00 0.00 3.27
59 60 8.916654 CATGTCTGGACGTAAATATATTCTCAC 58.083 37.037 0.00 0.00 0.00 3.51
60 61 7.431249 TGTCTGGACGTAAATATATTCTCACC 58.569 38.462 0.00 1.02 0.00 4.02
61 62 7.068962 TGTCTGGACGTAAATATATTCTCACCA 59.931 37.037 0.00 5.15 0.00 4.17
62 63 7.924412 GTCTGGACGTAAATATATTCTCACCAA 59.076 37.037 0.00 0.00 0.00 3.67
63 64 7.924412 TCTGGACGTAAATATATTCTCACCAAC 59.076 37.037 0.00 0.00 0.00 3.77
64 65 6.698329 TGGACGTAAATATATTCTCACCAACG 59.302 38.462 0.00 3.95 0.00 4.10
65 66 6.346359 GGACGTAAATATATTCTCACCAACGC 60.346 42.308 0.00 0.00 0.00 4.84
66 67 5.464389 ACGTAAATATATTCTCACCAACGCC 59.536 40.000 0.00 0.00 0.00 5.68
67 68 5.388061 CGTAAATATATTCTCACCAACGCCG 60.388 44.000 0.00 0.00 0.00 6.46
68 69 2.519377 TATATTCTCACCAACGCCGG 57.481 50.000 0.00 0.00 0.00 6.13
69 70 0.814010 ATATTCTCACCAACGCCGGC 60.814 55.000 19.07 19.07 0.00 6.13
70 71 2.862674 TATTCTCACCAACGCCGGCC 62.863 60.000 23.46 2.84 0.00 6.13
92 93 4.864334 GGCAGGGCGATGACTGGG 62.864 72.222 0.00 0.00 35.30 4.45
93 94 4.101448 GCAGGGCGATGACTGGGT 62.101 66.667 0.00 0.00 35.30 4.51
94 95 2.187946 CAGGGCGATGACTGGGTC 59.812 66.667 0.00 0.00 0.00 4.46
95 96 3.083997 AGGGCGATGACTGGGTCC 61.084 66.667 0.00 0.00 0.00 4.46
96 97 3.399181 GGGCGATGACTGGGTCCA 61.399 66.667 0.00 0.00 0.00 4.02
105 106 4.950479 CTGGGTCCAGCTGATCAC 57.050 61.111 17.39 9.37 37.24 3.06
106 107 1.153489 CTGGGTCCAGCTGATCACG 60.153 63.158 17.39 0.00 37.24 4.35
107 108 1.607801 CTGGGTCCAGCTGATCACGA 61.608 60.000 17.39 0.00 37.24 4.35
108 109 1.191489 TGGGTCCAGCTGATCACGAA 61.191 55.000 17.39 0.00 0.00 3.85
109 110 0.179000 GGGTCCAGCTGATCACGAAT 59.821 55.000 17.39 0.00 0.00 3.34
110 111 1.407437 GGGTCCAGCTGATCACGAATT 60.407 52.381 17.39 0.00 0.00 2.17
111 112 1.936547 GGTCCAGCTGATCACGAATTC 59.063 52.381 17.39 0.00 0.00 2.17
112 113 2.621338 GTCCAGCTGATCACGAATTCA 58.379 47.619 17.39 0.00 0.00 2.57
113 114 3.201290 GTCCAGCTGATCACGAATTCAT 58.799 45.455 17.39 0.00 0.00 2.57
114 115 3.002042 GTCCAGCTGATCACGAATTCATG 59.998 47.826 17.39 0.00 0.00 3.07
115 116 3.118665 TCCAGCTGATCACGAATTCATGA 60.119 43.478 17.39 6.68 0.00 3.07
116 117 3.002042 CCAGCTGATCACGAATTCATGAC 59.998 47.826 17.39 2.18 0.00 3.06
117 118 3.869832 CAGCTGATCACGAATTCATGACT 59.130 43.478 8.42 0.00 0.00 3.41
118 119 3.869832 AGCTGATCACGAATTCATGACTG 59.130 43.478 6.33 6.51 0.00 3.51
119 120 3.002042 GCTGATCACGAATTCATGACTGG 59.998 47.826 6.33 1.26 0.00 4.00
120 121 3.534554 TGATCACGAATTCATGACTGGG 58.465 45.455 6.33 0.00 0.00 4.45
121 122 3.055167 TGATCACGAATTCATGACTGGGT 60.055 43.478 6.33 0.00 0.00 4.51
122 123 2.972625 TCACGAATTCATGACTGGGTC 58.027 47.619 0.00 0.00 0.00 4.46
123 124 2.009774 CACGAATTCATGACTGGGTCC 58.990 52.381 6.22 0.00 0.00 4.46
124 125 1.628340 ACGAATTCATGACTGGGTCCA 59.372 47.619 6.22 0.00 0.00 4.02
133 134 3.133014 CTGGGTCCAGCGATCGAT 58.867 61.111 21.57 10.64 37.24 3.59
134 135 2.341452 CTGGGTCCAGCGATCGATA 58.659 57.895 21.57 0.00 37.24 2.92
135 136 0.891373 CTGGGTCCAGCGATCGATAT 59.109 55.000 21.57 0.00 37.24 1.63
136 137 1.273606 CTGGGTCCAGCGATCGATATT 59.726 52.381 21.57 0.00 37.24 1.28
137 138 1.691976 TGGGTCCAGCGATCGATATTT 59.308 47.619 21.57 0.00 0.00 1.40
138 139 2.104111 TGGGTCCAGCGATCGATATTTT 59.896 45.455 21.57 0.00 0.00 1.82
139 140 2.480419 GGGTCCAGCGATCGATATTTTG 59.520 50.000 21.57 0.00 0.00 2.44
140 141 2.480419 GGTCCAGCGATCGATATTTTGG 59.520 50.000 21.57 10.02 0.00 3.28
141 142 3.131396 GTCCAGCGATCGATATTTTGGT 58.869 45.455 21.57 0.00 0.00 3.67
142 143 3.059597 GTCCAGCGATCGATATTTTGGTG 60.060 47.826 21.57 2.12 0.00 4.17
143 144 2.224079 CCAGCGATCGATATTTTGGTGG 59.776 50.000 21.57 8.05 38.45 4.61
144 145 2.872245 CAGCGATCGATATTTTGGTGGT 59.128 45.455 21.57 0.00 0.00 4.16
145 146 2.872245 AGCGATCGATATTTTGGTGGTG 59.128 45.455 21.57 0.00 0.00 4.17
146 147 2.602217 GCGATCGATATTTTGGTGGTGC 60.602 50.000 21.57 0.00 0.00 5.01
147 148 2.611751 CGATCGATATTTTGGTGGTGCA 59.388 45.455 10.26 0.00 0.00 4.57
148 149 3.250762 CGATCGATATTTTGGTGGTGCAT 59.749 43.478 10.26 0.00 0.00 3.96
149 150 4.539870 GATCGATATTTTGGTGGTGCATG 58.460 43.478 0.00 0.00 0.00 4.06
150 151 3.351740 TCGATATTTTGGTGGTGCATGT 58.648 40.909 0.00 0.00 0.00 3.21
151 152 3.128415 TCGATATTTTGGTGGTGCATGTG 59.872 43.478 0.00 0.00 0.00 3.21
152 153 3.128415 CGATATTTTGGTGGTGCATGTGA 59.872 43.478 0.00 0.00 0.00 3.58
153 154 2.818130 ATTTTGGTGGTGCATGTGAC 57.182 45.000 0.00 0.00 0.00 3.67
154 155 0.749649 TTTTGGTGGTGCATGTGACC 59.250 50.000 8.66 8.66 0.00 4.02
155 156 0.106268 TTTGGTGGTGCATGTGACCT 60.106 50.000 14.82 0.00 34.26 3.85
156 157 0.106268 TTGGTGGTGCATGTGACCTT 60.106 50.000 14.82 0.00 34.26 3.50
157 158 0.537143 TGGTGGTGCATGTGACCTTC 60.537 55.000 14.82 9.20 34.26 3.46
158 159 1.244019 GGTGGTGCATGTGACCTTCC 61.244 60.000 14.82 13.03 34.26 3.46
159 160 1.074775 TGGTGCATGTGACCTTCCC 59.925 57.895 14.82 0.00 34.26 3.97
160 161 1.380302 GGTGCATGTGACCTTCCCT 59.620 57.895 8.40 0.00 0.00 4.20
161 162 0.251341 GGTGCATGTGACCTTCCCTT 60.251 55.000 8.40 0.00 0.00 3.95
162 163 0.883833 GTGCATGTGACCTTCCCTTG 59.116 55.000 0.00 0.00 0.00 3.61
163 164 0.478072 TGCATGTGACCTTCCCTTGT 59.522 50.000 0.00 0.00 0.00 3.16
164 165 1.168714 GCATGTGACCTTCCCTTGTC 58.831 55.000 0.00 0.00 0.00 3.18
165 166 1.545428 GCATGTGACCTTCCCTTGTCA 60.545 52.381 0.00 0.00 39.08 3.58
166 167 2.862541 CATGTGACCTTCCCTTGTCAA 58.137 47.619 0.00 0.00 42.67 3.18
167 168 3.221771 CATGTGACCTTCCCTTGTCAAA 58.778 45.455 0.00 0.00 42.67 2.69
168 169 2.930950 TGTGACCTTCCCTTGTCAAAG 58.069 47.619 0.00 0.00 42.67 2.77
169 170 2.241176 TGTGACCTTCCCTTGTCAAAGT 59.759 45.455 0.00 0.00 42.67 2.66
170 171 2.879026 GTGACCTTCCCTTGTCAAAGTC 59.121 50.000 0.00 0.00 42.67 3.01
171 172 2.158667 TGACCTTCCCTTGTCAAAGTCC 60.159 50.000 0.00 0.00 38.48 3.85
172 173 1.850345 ACCTTCCCTTGTCAAAGTCCA 59.150 47.619 0.00 0.00 0.00 4.02
173 174 2.230660 CCTTCCCTTGTCAAAGTCCAC 58.769 52.381 0.00 0.00 0.00 4.02
174 175 1.873591 CTTCCCTTGTCAAAGTCCACG 59.126 52.381 0.00 0.00 0.00 4.94
175 176 0.834612 TCCCTTGTCAAAGTCCACGT 59.165 50.000 0.00 0.00 0.00 4.49
176 177 1.202604 TCCCTTGTCAAAGTCCACGTC 60.203 52.381 0.00 0.00 0.00 4.34
177 178 0.859232 CCTTGTCAAAGTCCACGTCG 59.141 55.000 0.00 0.00 0.00 5.12
178 179 1.567504 CTTGTCAAAGTCCACGTCGT 58.432 50.000 0.00 0.00 0.00 4.34
179 180 1.521423 CTTGTCAAAGTCCACGTCGTC 59.479 52.381 0.00 0.00 0.00 4.20
180 181 0.742505 TGTCAAAGTCCACGTCGTCT 59.257 50.000 0.00 0.00 0.00 4.18
181 182 1.135527 TGTCAAAGTCCACGTCGTCTT 59.864 47.619 0.00 0.00 0.00 3.01
182 183 2.358582 TGTCAAAGTCCACGTCGTCTTA 59.641 45.455 0.00 0.00 0.00 2.10
183 184 3.005050 TGTCAAAGTCCACGTCGTCTTAT 59.995 43.478 0.00 0.00 0.00 1.73
192 193 1.271379 ACGTCGTCTTATGCTGTTGGA 59.729 47.619 0.00 0.00 0.00 3.53
207 209 4.022068 GCTGTTGGAATCATGGAAAGTGAA 60.022 41.667 0.00 0.00 0.00 3.18
241 243 0.762418 TGACTTCGATTGGGTGGTGT 59.238 50.000 0.00 0.00 0.00 4.16
242 244 1.270625 TGACTTCGATTGGGTGGTGTC 60.271 52.381 0.00 0.00 0.00 3.67
249 251 2.807676 GATTGGGTGGTGTCTTTGGAT 58.192 47.619 0.00 0.00 0.00 3.41
263 265 3.328343 TCTTTGGATTACCCGGTCTTGAA 59.672 43.478 0.00 0.00 37.93 2.69
283 285 1.990327 ACTCCGGGGTGAAAACCTTAT 59.010 47.619 5.91 0.00 0.00 1.73
286 288 1.816224 CCGGGGTGAAAACCTTATGTG 59.184 52.381 0.00 0.00 0.00 3.21
287 289 2.553466 CCGGGGTGAAAACCTTATGTGA 60.553 50.000 0.00 0.00 0.00 3.58
288 290 3.352648 CGGGGTGAAAACCTTATGTGAT 58.647 45.455 0.00 0.00 0.00 3.06
315 317 4.462483 CCAGTTGGTTATACTTGGCAATGT 59.538 41.667 0.00 3.98 0.00 2.71
319 321 3.275999 GGTTATACTTGGCAATGTCGGT 58.724 45.455 0.00 0.00 0.00 4.69
325 327 2.167487 ACTTGGCAATGTCGGTGTTTTT 59.833 40.909 0.00 0.00 0.00 1.94
347 349 1.673626 GCATCGTTACCCCGTTGAAGA 60.674 52.381 0.00 0.00 30.97 2.87
377 381 4.067896 TGGAGTTTGCTTGACTTGATCTC 58.932 43.478 0.00 0.00 0.00 2.75
389 393 4.043310 TGACTTGATCTCCAGGGTGAAAAT 59.957 41.667 0.00 0.00 0.00 1.82
402 406 3.600388 GGTGAAAATCCACGATCTGACT 58.400 45.455 0.00 0.00 37.91 3.41
406 410 5.179368 GTGAAAATCCACGATCTGACTTTCA 59.821 40.000 8.40 8.40 0.00 2.69
412 416 3.372206 CCACGATCTGACTTTCAATGGTC 59.628 47.826 0.00 0.00 0.00 4.02
413 417 3.996363 CACGATCTGACTTTCAATGGTCA 59.004 43.478 0.00 0.00 39.71 4.02
426 430 3.767131 TCAATGGTCAGATTAGGTGACGA 59.233 43.478 0.00 0.00 44.52 4.20
430 434 3.960755 TGGTCAGATTAGGTGACGATGAT 59.039 43.478 0.00 0.00 44.52 2.45
433 437 2.728318 CAGATTAGGTGACGATGATGCG 59.272 50.000 0.00 0.00 37.29 4.73
456 461 2.098443 GTGCAACGTTCCCTTTCTGAAA 59.902 45.455 0.00 2.44 0.00 2.69
457 462 2.755655 TGCAACGTTCCCTTTCTGAAAA 59.244 40.909 0.00 0.00 0.00 2.29
469 475 4.032786 CCTTTCTGAAAACGTTGCTTTTGG 59.967 41.667 0.00 0.00 0.00 3.28
473 479 4.027572 TGAAAACGTTGCTTTTGGAGAG 57.972 40.909 0.00 0.00 0.00 3.20
553 561 8.347035 TGTATATCGTCGATCACTGTTTTGATA 58.653 33.333 11.82 0.00 36.30 2.15
559 567 6.017933 GTCGATCACTGTTTTGATAGCTTTG 58.982 40.000 0.00 0.00 36.30 2.77
561 569 4.503741 TCACTGTTTTGATAGCTTTGGC 57.496 40.909 0.00 0.00 39.06 4.52
591 604 7.487822 TTCTTCTCTTCTCACCTTGACATAT 57.512 36.000 0.00 0.00 0.00 1.78
592 605 7.487822 TCTTCTCTTCTCACCTTGACATATT 57.512 36.000 0.00 0.00 0.00 1.28
599 612 5.556915 TCTCACCTTGACATATTTTCGGTT 58.443 37.500 0.00 0.00 0.00 4.44
625 638 9.845740 TTTATATAACTTAGCTCTTTGCCATCA 57.154 29.630 0.00 0.00 44.23 3.07
627 640 6.874288 ATAACTTAGCTCTTTGCCATCATC 57.126 37.500 0.00 0.00 44.23 2.92
632 645 1.266175 GCTCTTTGCCATCATCATCCG 59.734 52.381 0.00 0.00 35.15 4.18
633 646 1.266175 CTCTTTGCCATCATCATCCGC 59.734 52.381 0.00 0.00 0.00 5.54
689 702 3.576982 CCTAATTATGCAGAGACCGGGTA 59.423 47.826 6.32 0.00 0.00 3.69
694 709 1.264749 TGCAGAGACCGGGTATGCTT 61.265 55.000 23.73 0.00 37.76 3.91
710 725 6.942576 GGGTATGCTTATTGTGATTGTATCCT 59.057 38.462 0.00 0.00 0.00 3.24
716 731 8.147704 TGCTTATTGTGATTGTATCCTTCGATA 58.852 33.333 0.00 0.00 0.00 2.92
777 793 2.246719 AAAAACTCTCGCTGCTCAGT 57.753 45.000 0.00 0.00 0.00 3.41
778 794 1.506493 AAAACTCTCGCTGCTCAGTG 58.494 50.000 4.17 4.17 40.15 3.66
779 795 0.948141 AAACTCTCGCTGCTCAGTGC 60.948 55.000 5.61 0.00 38.74 4.40
795 811 2.103538 GCATCAGCACAATGGCCG 59.896 61.111 0.00 0.00 41.58 6.13
796 812 2.103538 CATCAGCACAATGGCCGC 59.896 61.111 0.00 0.00 0.00 6.53
797 813 2.044650 ATCAGCACAATGGCCGCT 60.045 55.556 0.00 0.00 36.10 5.52
798 814 1.679977 ATCAGCACAATGGCCGCTT 60.680 52.632 0.00 0.00 32.48 4.68
799 815 1.660560 ATCAGCACAATGGCCGCTTC 61.661 55.000 0.00 0.00 32.48 3.86
800 816 2.282391 AGCACAATGGCCGCTTCA 60.282 55.556 0.00 0.00 29.87 3.02
801 817 2.126346 GCACAATGGCCGCTTCAC 60.126 61.111 0.00 0.00 0.00 3.18
802 818 2.568090 CACAATGGCCGCTTCACC 59.432 61.111 0.00 0.00 0.00 4.02
803 819 2.676471 ACAATGGCCGCTTCACCC 60.676 61.111 0.00 0.00 0.00 4.61
804 820 2.676121 CAATGGCCGCTTCACCCA 60.676 61.111 0.00 0.00 0.00 4.51
805 821 2.676471 AATGGCCGCTTCACCCAC 60.676 61.111 0.00 0.00 0.00 4.61
811 827 3.283684 CGCTTCACCCACGCCAAA 61.284 61.111 0.00 0.00 0.00 3.28
812 828 2.840066 CGCTTCACCCACGCCAAAA 61.840 57.895 0.00 0.00 0.00 2.44
813 829 1.439644 GCTTCACCCACGCCAAAAA 59.560 52.632 0.00 0.00 0.00 1.94
814 830 0.874175 GCTTCACCCACGCCAAAAAC 60.874 55.000 0.00 0.00 0.00 2.43
815 831 0.744281 CTTCACCCACGCCAAAAACT 59.256 50.000 0.00 0.00 0.00 2.66
816 832 0.741915 TTCACCCACGCCAAAAACTC 59.258 50.000 0.00 0.00 0.00 3.01
817 833 0.394488 TCACCCACGCCAAAAACTCA 60.394 50.000 0.00 0.00 0.00 3.41
818 834 0.673437 CACCCACGCCAAAAACTCAT 59.327 50.000 0.00 0.00 0.00 2.90
819 835 0.958822 ACCCACGCCAAAAACTCATC 59.041 50.000 0.00 0.00 0.00 2.92
820 836 1.247567 CCCACGCCAAAAACTCATCT 58.752 50.000 0.00 0.00 0.00 2.90
821 837 1.613437 CCCACGCCAAAAACTCATCTT 59.387 47.619 0.00 0.00 0.00 2.40
822 838 2.035832 CCCACGCCAAAAACTCATCTTT 59.964 45.455 0.00 0.00 0.00 2.52
823 839 3.052036 CCACGCCAAAAACTCATCTTTG 58.948 45.455 0.00 0.00 33.25 2.77
824 840 3.243367 CCACGCCAAAAACTCATCTTTGA 60.243 43.478 0.00 0.00 35.03 2.69
825 841 3.730715 CACGCCAAAAACTCATCTTTGAC 59.269 43.478 0.00 0.00 35.03 3.18
826 842 3.632145 ACGCCAAAAACTCATCTTTGACT 59.368 39.130 0.00 0.00 35.03 3.41
827 843 4.819630 ACGCCAAAAACTCATCTTTGACTA 59.180 37.500 0.00 0.00 35.03 2.59
828 844 5.049405 ACGCCAAAAACTCATCTTTGACTAG 60.049 40.000 0.00 0.00 35.03 2.57
829 845 5.157067 GCCAAAAACTCATCTTTGACTAGC 58.843 41.667 0.00 0.00 35.03 3.42
830 846 5.278463 GCCAAAAACTCATCTTTGACTAGCA 60.278 40.000 0.00 0.00 35.03 3.49
831 847 6.145535 CCAAAAACTCATCTTTGACTAGCAC 58.854 40.000 0.00 0.00 35.03 4.40
832 848 5.597813 AAAACTCATCTTTGACTAGCACG 57.402 39.130 0.00 0.00 0.00 5.34
833 849 3.944055 ACTCATCTTTGACTAGCACGT 57.056 42.857 0.00 0.00 0.00 4.49
834 850 5.386958 AACTCATCTTTGACTAGCACGTA 57.613 39.130 0.00 0.00 0.00 3.57
835 851 4.734917 ACTCATCTTTGACTAGCACGTAC 58.265 43.478 0.00 0.00 0.00 3.67
836 852 4.217767 ACTCATCTTTGACTAGCACGTACA 59.782 41.667 0.00 0.00 0.00 2.90
837 853 4.482386 TCATCTTTGACTAGCACGTACAC 58.518 43.478 0.00 0.00 0.00 2.90
838 854 4.217767 TCATCTTTGACTAGCACGTACACT 59.782 41.667 0.00 0.00 0.00 3.55
839 855 4.156664 TCTTTGACTAGCACGTACACTC 57.843 45.455 0.00 0.00 0.00 3.51
840 856 3.057736 TCTTTGACTAGCACGTACACTCC 60.058 47.826 0.00 0.00 0.00 3.85
841 857 1.900245 TGACTAGCACGTACACTCCA 58.100 50.000 0.00 0.00 0.00 3.86
842 858 2.443416 TGACTAGCACGTACACTCCAT 58.557 47.619 0.00 0.00 0.00 3.41
843 859 2.163613 TGACTAGCACGTACACTCCATG 59.836 50.000 0.00 0.00 0.00 3.66
844 860 1.476891 ACTAGCACGTACACTCCATGG 59.523 52.381 4.97 4.97 0.00 3.66
845 861 0.174845 TAGCACGTACACTCCATGGC 59.825 55.000 6.96 0.00 0.00 4.40
846 862 1.375396 GCACGTACACTCCATGGCA 60.375 57.895 6.96 0.00 0.00 4.92
847 863 1.635663 GCACGTACACTCCATGGCAC 61.636 60.000 6.96 0.00 0.00 5.01
848 864 1.080093 ACGTACACTCCATGGCACG 60.080 57.895 6.96 13.05 43.04 5.34
849 865 1.809619 CGTACACTCCATGGCACGG 60.810 63.158 6.96 0.00 37.27 4.94
850 866 2.106683 GTACACTCCATGGCACGGC 61.107 63.158 6.96 0.00 0.00 5.68
851 867 2.588201 TACACTCCATGGCACGGCA 61.588 57.895 6.96 0.00 0.00 5.69
852 868 2.118233 TACACTCCATGGCACGGCAA 62.118 55.000 6.96 0.00 0.00 4.52
853 869 2.360350 ACTCCATGGCACGGCAAG 60.360 61.111 6.96 0.00 0.00 4.01
854 870 3.136123 CTCCATGGCACGGCAAGG 61.136 66.667 6.96 8.45 0.00 3.61
858 874 4.802051 ATGGCACGGCAAGGCGAT 62.802 61.111 22.91 2.56 0.00 4.58
865 881 4.802051 GGCAAGGCGATGGCTGGA 62.802 66.667 11.59 0.00 42.22 3.86
866 882 3.512516 GCAAGGCGATGGCTGGAC 61.513 66.667 0.00 0.00 38.81 4.02
867 883 2.825836 CAAGGCGATGGCTGGACC 60.826 66.667 0.00 0.00 38.81 4.46
868 884 4.115199 AAGGCGATGGCTGGACCC 62.115 66.667 0.00 0.00 38.81 4.46
870 886 4.864334 GGCGATGGCTGGACCCTG 62.864 72.222 0.00 0.00 39.81 4.45
871 887 4.864334 GCGATGGCTGGACCCTGG 62.864 72.222 0.00 0.00 37.83 4.45
872 888 3.083349 CGATGGCTGGACCCTGGA 61.083 66.667 0.00 0.00 37.83 3.86
873 889 2.592308 GATGGCTGGACCCTGGAC 59.408 66.667 0.00 0.00 37.83 4.02
874 890 2.204136 ATGGCTGGACCCTGGACA 60.204 61.111 0.00 0.00 37.83 4.02
875 891 1.852157 ATGGCTGGACCCTGGACAA 60.852 57.895 0.00 0.00 37.83 3.18
876 892 1.434513 ATGGCTGGACCCTGGACAAA 61.435 55.000 0.00 0.00 37.83 2.83
877 893 1.384191 GGCTGGACCCTGGACAAAT 59.616 57.895 0.00 0.00 0.00 2.32
878 894 0.251787 GGCTGGACCCTGGACAAATT 60.252 55.000 0.00 0.00 0.00 1.82
879 895 1.632589 GCTGGACCCTGGACAAATTT 58.367 50.000 0.00 0.00 0.00 1.82
880 896 1.273327 GCTGGACCCTGGACAAATTTG 59.727 52.381 16.67 16.67 0.00 2.32
881 897 2.875296 CTGGACCCTGGACAAATTTGA 58.125 47.619 24.64 1.45 0.00 2.69
882 898 2.558359 CTGGACCCTGGACAAATTTGAC 59.442 50.000 24.64 17.82 0.00 3.18
883 899 2.176798 TGGACCCTGGACAAATTTGACT 59.823 45.455 24.64 2.84 0.00 3.41
884 900 2.558359 GGACCCTGGACAAATTTGACTG 59.442 50.000 24.64 17.74 0.00 3.51
885 901 1.963515 ACCCTGGACAAATTTGACTGC 59.036 47.619 24.64 9.10 0.00 4.40
886 902 1.273327 CCCTGGACAAATTTGACTGCC 59.727 52.381 24.64 17.84 0.00 4.85
887 903 2.242043 CCTGGACAAATTTGACTGCCT 58.758 47.619 24.64 0.44 0.00 4.75
888 904 2.629617 CCTGGACAAATTTGACTGCCTT 59.370 45.455 24.64 0.00 0.00 4.35
889 905 3.553508 CCTGGACAAATTTGACTGCCTTG 60.554 47.826 24.64 14.24 0.00 3.61
890 906 2.364970 TGGACAAATTTGACTGCCTTGG 59.635 45.455 24.64 0.00 0.00 3.61
891 907 2.627699 GGACAAATTTGACTGCCTTGGA 59.372 45.455 24.64 0.00 0.00 3.53
892 908 3.069443 GGACAAATTTGACTGCCTTGGAA 59.931 43.478 24.64 0.00 0.00 3.53
893 909 4.442753 GGACAAATTTGACTGCCTTGGAAA 60.443 41.667 24.64 0.00 0.00 3.13
894 910 5.096443 ACAAATTTGACTGCCTTGGAAAA 57.904 34.783 24.64 0.00 0.00 2.29
895 911 5.495640 ACAAATTTGACTGCCTTGGAAAAA 58.504 33.333 24.64 0.00 0.00 1.94
896 912 5.353956 ACAAATTTGACTGCCTTGGAAAAAC 59.646 36.000 24.64 0.00 0.00 2.43
897 913 2.861462 TTGACTGCCTTGGAAAAACG 57.139 45.000 0.00 0.00 0.00 3.60
898 914 1.757682 TGACTGCCTTGGAAAAACGT 58.242 45.000 0.00 0.00 0.00 3.99
899 915 2.920524 TGACTGCCTTGGAAAAACGTA 58.079 42.857 0.00 0.00 0.00 3.57
900 916 3.482436 TGACTGCCTTGGAAAAACGTAT 58.518 40.909 0.00 0.00 0.00 3.06
901 917 3.252215 TGACTGCCTTGGAAAAACGTATG 59.748 43.478 0.00 0.00 0.00 2.39
902 918 2.030274 ACTGCCTTGGAAAAACGTATGC 60.030 45.455 0.00 0.00 0.00 3.14
903 919 2.228822 CTGCCTTGGAAAAACGTATGCT 59.771 45.455 0.00 0.00 0.00 3.79
904 920 2.227865 TGCCTTGGAAAAACGTATGCTC 59.772 45.455 0.00 0.00 0.00 4.26
905 921 2.727916 GCCTTGGAAAAACGTATGCTCG 60.728 50.000 0.00 0.00 0.00 5.03
906 922 2.505866 CTTGGAAAAACGTATGCTCGC 58.494 47.619 0.00 0.00 0.00 5.03
907 923 0.800012 TGGAAAAACGTATGCTCGCC 59.200 50.000 0.00 0.00 0.00 5.54
908 924 0.247537 GGAAAAACGTATGCTCGCCG 60.248 55.000 0.00 0.00 0.00 6.46
909 925 0.441145 GAAAAACGTATGCTCGCCGT 59.559 50.000 0.00 0.00 36.17 5.68
910 926 0.165079 AAAAACGTATGCTCGCCGTG 59.835 50.000 0.00 0.00 34.62 4.94
911 927 2.235536 AAAACGTATGCTCGCCGTGC 62.236 55.000 3.88 3.88 34.62 5.34
934 950 4.838152 ACGCGGCGCCAGAATCAT 62.838 61.111 28.98 0.24 0.00 2.45
935 951 4.303603 CGCGGCGCCAGAATCATG 62.304 66.667 28.98 8.44 0.00 3.07
936 952 2.896854 GCGGCGCCAGAATCATGA 60.897 61.111 28.98 0.00 0.00 3.07
937 953 2.256591 GCGGCGCCAGAATCATGAT 61.257 57.895 28.98 1.18 0.00 2.45
938 954 1.864862 CGGCGCCAGAATCATGATC 59.135 57.895 28.98 2.96 0.00 2.92
939 955 0.881600 CGGCGCCAGAATCATGATCA 60.882 55.000 28.98 0.00 0.00 2.92
940 956 1.531423 GGCGCCAGAATCATGATCAT 58.469 50.000 24.80 1.18 0.00 2.45
941 957 2.703416 GGCGCCAGAATCATGATCATA 58.297 47.619 24.80 0.00 0.00 2.15
942 958 3.076621 GGCGCCAGAATCATGATCATAA 58.923 45.455 24.80 0.00 0.00 1.90
943 959 3.503363 GGCGCCAGAATCATGATCATAAA 59.497 43.478 24.80 0.00 0.00 1.40
944 960 4.157289 GGCGCCAGAATCATGATCATAAAT 59.843 41.667 24.80 2.40 0.00 1.40
945 961 5.330295 GCGCCAGAATCATGATCATAAATC 58.670 41.667 9.06 6.77 0.00 2.17
946 962 5.675575 GCGCCAGAATCATGATCATAAATCC 60.676 44.000 9.06 0.00 0.00 3.01
947 963 5.413523 CGCCAGAATCATGATCATAAATCCA 59.586 40.000 9.06 0.00 0.00 3.41
948 964 6.618811 GCCAGAATCATGATCATAAATCCAC 58.381 40.000 9.06 2.07 0.00 4.02
949 965 6.349944 GCCAGAATCATGATCATAAATCCACC 60.350 42.308 9.06 0.00 0.00 4.61
950 966 6.128090 CCAGAATCATGATCATAAATCCACCG 60.128 42.308 9.06 0.00 0.00 4.94
951 967 5.413833 AGAATCATGATCATAAATCCACCGC 59.586 40.000 9.06 0.00 0.00 5.68
952 968 3.411446 TCATGATCATAAATCCACCGCC 58.589 45.455 8.15 0.00 0.00 6.13
953 969 2.270352 TGATCATAAATCCACCGCCC 57.730 50.000 0.00 0.00 0.00 6.13
954 970 1.492599 TGATCATAAATCCACCGCCCA 59.507 47.619 0.00 0.00 0.00 5.36
955 971 1.880027 GATCATAAATCCACCGCCCAC 59.120 52.381 0.00 0.00 0.00 4.61
956 972 0.916086 TCATAAATCCACCGCCCACT 59.084 50.000 0.00 0.00 0.00 4.00
957 973 1.134220 TCATAAATCCACCGCCCACTC 60.134 52.381 0.00 0.00 0.00 3.51
958 974 1.134098 CATAAATCCACCGCCCACTCT 60.134 52.381 0.00 0.00 0.00 3.24
959 975 0.539986 TAAATCCACCGCCCACTCTC 59.460 55.000 0.00 0.00 0.00 3.20
960 976 2.198304 AAATCCACCGCCCACTCTCC 62.198 60.000 0.00 0.00 0.00 3.71
963 979 2.363795 CACCGCCCACTCTCCCTA 60.364 66.667 0.00 0.00 0.00 3.53
964 980 2.363925 ACCGCCCACTCTCCCTAC 60.364 66.667 0.00 0.00 0.00 3.18
965 981 2.042843 CCGCCCACTCTCCCTACT 60.043 66.667 0.00 0.00 0.00 2.57
966 982 2.128507 CCGCCCACTCTCCCTACTC 61.129 68.421 0.00 0.00 0.00 2.59
967 983 1.379977 CGCCCACTCTCCCTACTCA 60.380 63.158 0.00 0.00 0.00 3.41
968 984 1.668101 CGCCCACTCTCCCTACTCAC 61.668 65.000 0.00 0.00 0.00 3.51
969 985 0.324830 GCCCACTCTCCCTACTCACT 60.325 60.000 0.00 0.00 0.00 3.41
970 986 1.770294 CCCACTCTCCCTACTCACTC 58.230 60.000 0.00 0.00 0.00 3.51
971 987 1.686741 CCCACTCTCCCTACTCACTCC 60.687 61.905 0.00 0.00 0.00 3.85
972 988 1.006043 CCACTCTCCCTACTCACTCCA 59.994 57.143 0.00 0.00 0.00 3.86
973 989 2.096248 CACTCTCCCTACTCACTCCAC 58.904 57.143 0.00 0.00 0.00 4.02
974 990 1.711375 ACTCTCCCTACTCACTCCACA 59.289 52.381 0.00 0.00 0.00 4.17
975 991 2.096248 CTCTCCCTACTCACTCCACAC 58.904 57.143 0.00 0.00 0.00 3.82
976 992 1.427753 TCTCCCTACTCACTCCACACA 59.572 52.381 0.00 0.00 0.00 3.72
977 993 2.158370 TCTCCCTACTCACTCCACACAA 60.158 50.000 0.00 0.00 0.00 3.33
978 994 1.968493 TCCCTACTCACTCCACACAAC 59.032 52.381 0.00 0.00 0.00 3.32
979 995 1.002087 CCCTACTCACTCCACACAACC 59.998 57.143 0.00 0.00 0.00 3.77
980 996 1.691976 CCTACTCACTCCACACAACCA 59.308 52.381 0.00 0.00 0.00 3.67
981 997 2.104111 CCTACTCACTCCACACAACCAA 59.896 50.000 0.00 0.00 0.00 3.67
982 998 2.799126 ACTCACTCCACACAACCAAA 57.201 45.000 0.00 0.00 0.00 3.28
983 999 2.365582 ACTCACTCCACACAACCAAAC 58.634 47.619 0.00 0.00 0.00 2.93
984 1000 2.290641 ACTCACTCCACACAACCAAACA 60.291 45.455 0.00 0.00 0.00 2.83
985 1001 2.355756 CTCACTCCACACAACCAAACAG 59.644 50.000 0.00 0.00 0.00 3.16
986 1002 1.102978 ACTCCACACAACCAAACAGC 58.897 50.000 0.00 0.00 0.00 4.40
987 1003 0.385390 CTCCACACAACCAAACAGCC 59.615 55.000 0.00 0.00 0.00 4.85
988 1004 0.323816 TCCACACAACCAAACAGCCA 60.324 50.000 0.00 0.00 0.00 4.75
989 1005 0.534412 CCACACAACCAAACAGCCAA 59.466 50.000 0.00 0.00 0.00 4.52
990 1006 1.471327 CCACACAACCAAACAGCCAAG 60.471 52.381 0.00 0.00 0.00 3.61
991 1007 1.476085 CACACAACCAAACAGCCAAGA 59.524 47.619 0.00 0.00 0.00 3.02
992 1008 2.101249 CACACAACCAAACAGCCAAGAT 59.899 45.455 0.00 0.00 0.00 2.40
993 1009 2.765699 ACACAACCAAACAGCCAAGATT 59.234 40.909 0.00 0.00 0.00 2.40
994 1010 3.181476 ACACAACCAAACAGCCAAGATTC 60.181 43.478 0.00 0.00 0.00 2.52
995 1011 3.030291 ACAACCAAACAGCCAAGATTCA 58.970 40.909 0.00 0.00 0.00 2.57
996 1012 3.450457 ACAACCAAACAGCCAAGATTCAA 59.550 39.130 0.00 0.00 0.00 2.69
997 1013 4.101430 ACAACCAAACAGCCAAGATTCAAT 59.899 37.500 0.00 0.00 0.00 2.57
998 1014 4.525912 ACCAAACAGCCAAGATTCAATC 57.474 40.909 0.00 0.00 0.00 2.67
999 1015 3.896888 ACCAAACAGCCAAGATTCAATCA 59.103 39.130 0.00 0.00 0.00 2.57
1000 1016 4.344679 ACCAAACAGCCAAGATTCAATCAA 59.655 37.500 0.00 0.00 0.00 2.57
1001 1017 5.012354 ACCAAACAGCCAAGATTCAATCAAT 59.988 36.000 0.00 0.00 0.00 2.57
1002 1018 5.350365 CCAAACAGCCAAGATTCAATCAATG 59.650 40.000 0.00 0.00 0.00 2.82
1003 1019 4.730949 ACAGCCAAGATTCAATCAATGG 57.269 40.909 14.91 14.91 39.87 3.16
1006 1022 3.088194 CCAAGATTCAATCAATGGCCG 57.912 47.619 8.78 0.00 33.64 6.13
1007 1023 2.466846 CAAGATTCAATCAATGGCCGC 58.533 47.619 0.00 0.00 0.00 6.53
1008 1024 2.062971 AGATTCAATCAATGGCCGCT 57.937 45.000 0.00 0.00 0.00 5.52
1009 1025 1.952296 AGATTCAATCAATGGCCGCTC 59.048 47.619 0.00 0.00 0.00 5.03
1010 1026 1.952296 GATTCAATCAATGGCCGCTCT 59.048 47.619 0.00 0.00 0.00 4.09
1011 1027 1.382522 TTCAATCAATGGCCGCTCTC 58.617 50.000 0.00 0.00 0.00 3.20
1012 1028 0.543277 TCAATCAATGGCCGCTCTCT 59.457 50.000 0.00 0.00 0.00 3.10
1013 1029 0.942962 CAATCAATGGCCGCTCTCTC 59.057 55.000 0.00 0.00 0.00 3.20
1014 1030 0.543277 AATCAATGGCCGCTCTCTCA 59.457 50.000 0.00 0.00 0.00 3.27
1015 1031 0.763652 ATCAATGGCCGCTCTCTCAT 59.236 50.000 0.00 0.00 0.00 2.90
1016 1032 0.105593 TCAATGGCCGCTCTCTCATC 59.894 55.000 0.00 0.00 0.00 2.92
1017 1033 0.179065 CAATGGCCGCTCTCTCATCA 60.179 55.000 0.00 0.00 0.00 3.07
1018 1034 0.179062 AATGGCCGCTCTCTCATCAC 60.179 55.000 0.00 0.00 0.00 3.06
1019 1035 2.037620 ATGGCCGCTCTCTCATCACC 62.038 60.000 0.00 0.00 0.00 4.02
1020 1036 2.430610 GGCCGCTCTCTCATCACCT 61.431 63.158 0.00 0.00 0.00 4.00
1021 1037 1.519719 GCCGCTCTCTCATCACCTT 59.480 57.895 0.00 0.00 0.00 3.50
1022 1038 0.529555 GCCGCTCTCTCATCACCTTC 60.530 60.000 0.00 0.00 0.00 3.46
1023 1039 0.103937 CCGCTCTCTCATCACCTTCC 59.896 60.000 0.00 0.00 0.00 3.46
1024 1040 0.103937 CGCTCTCTCATCACCTTCCC 59.896 60.000 0.00 0.00 0.00 3.97
1025 1041 0.103937 GCTCTCTCATCACCTTCCCG 59.896 60.000 0.00 0.00 0.00 5.14
1026 1042 1.479709 CTCTCTCATCACCTTCCCGT 58.520 55.000 0.00 0.00 0.00 5.28
1027 1043 2.656002 CTCTCTCATCACCTTCCCGTA 58.344 52.381 0.00 0.00 0.00 4.02
1028 1044 3.226777 CTCTCTCATCACCTTCCCGTAT 58.773 50.000 0.00 0.00 0.00 3.06
1029 1045 3.639094 CTCTCTCATCACCTTCCCGTATT 59.361 47.826 0.00 0.00 0.00 1.89
1030 1046 3.637229 TCTCTCATCACCTTCCCGTATTC 59.363 47.826 0.00 0.00 0.00 1.75
1031 1047 3.639094 CTCTCATCACCTTCCCGTATTCT 59.361 47.826 0.00 0.00 0.00 2.40
1032 1048 3.637229 TCTCATCACCTTCCCGTATTCTC 59.363 47.826 0.00 0.00 0.00 2.87
1033 1049 3.371034 TCATCACCTTCCCGTATTCTCA 58.629 45.455 0.00 0.00 0.00 3.27
1034 1050 3.967326 TCATCACCTTCCCGTATTCTCAT 59.033 43.478 0.00 0.00 0.00 2.90
1035 1051 4.039245 TCATCACCTTCCCGTATTCTCATC 59.961 45.833 0.00 0.00 0.00 2.92
1036 1052 3.643237 TCACCTTCCCGTATTCTCATCT 58.357 45.455 0.00 0.00 0.00 2.90
1037 1053 4.030913 TCACCTTCCCGTATTCTCATCTT 58.969 43.478 0.00 0.00 0.00 2.40
1038 1054 4.469945 TCACCTTCCCGTATTCTCATCTTT 59.530 41.667 0.00 0.00 0.00 2.52
1039 1055 5.659525 TCACCTTCCCGTATTCTCATCTTTA 59.340 40.000 0.00 0.00 0.00 1.85
1040 1056 6.326583 TCACCTTCCCGTATTCTCATCTTTAT 59.673 38.462 0.00 0.00 0.00 1.40
1041 1057 7.507956 TCACCTTCCCGTATTCTCATCTTTATA 59.492 37.037 0.00 0.00 0.00 0.98
1042 1058 7.599245 CACCTTCCCGTATTCTCATCTTTATAC 59.401 40.741 0.00 0.00 0.00 1.47
1043 1059 7.509659 ACCTTCCCGTATTCTCATCTTTATACT 59.490 37.037 0.00 0.00 0.00 2.12
1044 1060 7.815068 CCTTCCCGTATTCTCATCTTTATACTG 59.185 40.741 0.00 0.00 0.00 2.74
1045 1061 7.228314 TCCCGTATTCTCATCTTTATACTGG 57.772 40.000 0.00 0.00 32.40 4.00
1046 1062 6.781014 TCCCGTATTCTCATCTTTATACTGGT 59.219 38.462 0.00 0.00 32.75 4.00
1047 1063 7.946219 TCCCGTATTCTCATCTTTATACTGGTA 59.054 37.037 0.00 0.00 32.75 3.25
1048 1064 8.027771 CCCGTATTCTCATCTTTATACTGGTAC 58.972 40.741 0.00 0.00 0.00 3.34
1049 1065 8.794553 CCGTATTCTCATCTTTATACTGGTACT 58.205 37.037 0.00 0.00 0.00 2.73
1060 1076 8.996655 TCTTTATACTGGTACTACTACTCTCCA 58.003 37.037 0.00 0.00 0.00 3.86
1061 1077 8.970859 TTTATACTGGTACTACTACTCTCCAC 57.029 38.462 0.00 0.00 0.00 4.02
1062 1078 4.233632 ACTGGTACTACTACTCTCCACC 57.766 50.000 0.00 0.00 0.00 4.61
1063 1079 3.204526 CTGGTACTACTACTCTCCACCG 58.795 54.545 0.00 0.00 0.00 4.94
1064 1080 2.573462 TGGTACTACTACTCTCCACCGT 59.427 50.000 0.00 0.00 0.00 4.83
1065 1081 3.202097 GGTACTACTACTCTCCACCGTC 58.798 54.545 0.00 0.00 0.00 4.79
1066 1082 3.118445 GGTACTACTACTCTCCACCGTCT 60.118 52.174 0.00 0.00 0.00 4.18
1067 1083 3.264998 ACTACTACTCTCCACCGTCTC 57.735 52.381 0.00 0.00 0.00 3.36
1068 1084 2.093021 ACTACTACTCTCCACCGTCTCC 60.093 54.545 0.00 0.00 0.00 3.71
1069 1085 0.392729 ACTACTCTCCACCGTCTCCG 60.393 60.000 0.00 0.00 0.00 4.63
1070 1086 1.716826 CTACTCTCCACCGTCTCCGC 61.717 65.000 0.00 0.00 0.00 5.54
1071 1087 2.194388 TACTCTCCACCGTCTCCGCT 62.194 60.000 0.00 0.00 0.00 5.52
1072 1088 3.057547 CTCTCCACCGTCTCCGCTG 62.058 68.421 0.00 0.00 0.00 5.18
1073 1089 4.803426 CTCCACCGTCTCCGCTGC 62.803 72.222 0.00 0.00 0.00 5.25
1080 1096 4.756458 GTCTCCGCTGCTGCTGCT 62.756 66.667 25.43 0.00 40.48 4.24
1083 1099 3.954465 CTCCGCTGCTGCTGCTTCT 62.954 63.158 25.43 0.00 40.48 2.85
1086 1102 2.033755 CGCTGCTGCTGCTTCTTCT 61.034 57.895 25.43 0.00 40.48 2.85
1102 1118 5.411361 GCTTCTTCTTCTTCTTCTTCTTCCC 59.589 44.000 0.00 0.00 0.00 3.97
1212 1231 3.168528 AACTGGACCACCGGCACT 61.169 61.111 0.00 0.00 45.88 4.40
1213 1232 3.178540 AACTGGACCACCGGCACTC 62.179 63.158 0.00 0.00 45.88 3.51
1250 1269 2.125952 CATCTCGTGCAGCCGACA 60.126 61.111 2.24 0.00 32.57 4.35
1270 1289 0.599991 TAGGCAACGTGTCACTGCTG 60.600 55.000 14.72 5.76 46.39 4.41
1282 1301 2.100631 ACTGCTGTATCGTTGCCGC 61.101 57.895 0.00 0.00 0.00 6.53
1285 1304 2.695055 CTGTATCGTTGCCGCACG 59.305 61.111 0.00 0.46 41.78 5.34
1341 1360 5.622180 GGTAACCTCTCTTTCCTTTCTGTT 58.378 41.667 0.00 0.00 0.00 3.16
1353 1372 3.711704 TCCTTTCTGTTCTCAACCTCACT 59.288 43.478 0.00 0.00 0.00 3.41
1362 1381 2.365617 TCTCAACCTCACTCTCACCAAC 59.634 50.000 0.00 0.00 0.00 3.77
1843 1869 4.988540 GCAATCAAAGTTTTAACCTCCCAC 59.011 41.667 0.00 0.00 0.00 4.61
1898 1924 1.648467 GCCGGTCAGTTTCCATCAGC 61.648 60.000 1.90 0.00 0.00 4.26
1993 2020 5.220605 GGTTAGCCAAATTATCACGACTCAC 60.221 44.000 0.00 0.00 34.09 3.51
2007 2034 3.251571 CGACTCACCTGGCTTAACTTAC 58.748 50.000 0.00 0.00 0.00 2.34
2008 2035 3.305813 CGACTCACCTGGCTTAACTTACA 60.306 47.826 0.00 0.00 0.00 2.41
2022 2049 9.556030 GGCTTAACTTACAATCTAACAACATTC 57.444 33.333 0.00 0.00 0.00 2.67
2072 2099 3.336468 TCTCACCAGTCTTACTCGTCTC 58.664 50.000 0.00 0.00 0.00 3.36
2128 2155 3.809832 CCACCAGAATTAGGTCTTATGCG 59.190 47.826 0.00 0.00 37.23 4.73
2328 2356 7.147461 ACAATTTAGAGGGGAATCTAGACTTCC 60.147 40.741 18.43 18.43 41.26 3.46
2432 2460 1.602377 GGAAACCTCACTTCACGGTTG 59.398 52.381 0.00 0.00 40.67 3.77
2549 2577 0.391597 TATTCACCGAGCCGATTCCC 59.608 55.000 0.00 0.00 0.00 3.97
2660 2688 3.871485 TCGGAGTCTAGGACAGTTACTC 58.129 50.000 0.52 0.00 36.64 2.59
2704 2732 2.877097 TCCATACCAAGCAGCTTTGA 57.123 45.000 13.09 0.00 0.00 2.69
2824 2852 5.774184 TGGATGTTTCTCACAATTCCATTGA 59.226 36.000 3.47 0.00 38.96 2.57
2861 2889 6.534436 CAGATGATGTTTCTGGTCTAAGACAG 59.466 42.308 0.00 0.00 37.53 3.51
2864 2892 7.009179 TGATGTTTCTGGTCTAAGACAGATT 57.991 36.000 1.61 0.00 35.17 2.40
2865 2893 6.875726 TGATGTTTCTGGTCTAAGACAGATTG 59.124 38.462 1.61 0.00 35.17 2.67
2939 2969 5.794687 TTGGACAACTTGATATGCTAACG 57.205 39.130 0.00 0.00 0.00 3.18
2943 2973 5.051907 GGACAACTTGATATGCTAACGTACG 60.052 44.000 15.01 15.01 0.00 3.67
2954 2984 9.985318 GATATGCTAACGTACGTAAATCTATCT 57.015 33.333 23.12 4.93 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.258726 GGCTGCCCGTTTCGACTTT 61.259 57.895 7.66 0.00 0.00 2.66
1 2 2.668550 GGCTGCCCGTTTCGACTT 60.669 61.111 7.66 0.00 0.00 3.01
2 3 4.699522 GGGCTGCCCGTTTCGACT 62.700 66.667 24.16 0.00 32.13 4.18
17 18 2.983879 ATGACTGGGAAAGGCCGGG 61.984 63.158 2.18 0.00 37.63 5.73
18 19 1.750399 CATGACTGGGAAAGGCCGG 60.750 63.158 0.00 0.00 37.63 6.13
19 20 1.002134 ACATGACTGGGAAAGGCCG 60.002 57.895 0.00 0.00 37.63 6.13
20 21 0.329596 AGACATGACTGGGAAAGGCC 59.670 55.000 0.00 0.00 29.74 5.19
21 22 1.457346 CAGACATGACTGGGAAAGGC 58.543 55.000 16.21 0.00 34.64 4.35
29 30 8.818141 AATATATTTACGTCCAGACATGACTG 57.182 34.615 16.92 16.92 37.61 3.51
30 31 8.861086 AGAATATATTTACGTCCAGACATGACT 58.139 33.333 0.00 0.00 0.00 3.41
31 32 9.130312 GAGAATATATTTACGTCCAGACATGAC 57.870 37.037 0.00 0.00 0.00 3.06
32 33 8.856103 TGAGAATATATTTACGTCCAGACATGA 58.144 33.333 0.00 0.00 0.00 3.07
33 34 8.916654 GTGAGAATATATTTACGTCCAGACATG 58.083 37.037 0.00 0.00 0.00 3.21
34 35 8.088981 GGTGAGAATATATTTACGTCCAGACAT 58.911 37.037 0.00 0.00 0.00 3.06
35 36 7.068962 TGGTGAGAATATATTTACGTCCAGACA 59.931 37.037 0.00 0.00 0.00 3.41
36 37 7.431249 TGGTGAGAATATATTTACGTCCAGAC 58.569 38.462 0.00 0.00 0.00 3.51
37 38 7.591421 TGGTGAGAATATATTTACGTCCAGA 57.409 36.000 0.00 0.00 0.00 3.86
38 39 7.096189 CGTTGGTGAGAATATATTTACGTCCAG 60.096 40.741 0.00 0.00 0.00 3.86
39 40 6.698329 CGTTGGTGAGAATATATTTACGTCCA 59.302 38.462 0.00 7.22 0.00 4.02
40 41 6.346359 GCGTTGGTGAGAATATATTTACGTCC 60.346 42.308 0.00 5.17 0.00 4.79
41 42 6.346359 GGCGTTGGTGAGAATATATTTACGTC 60.346 42.308 0.00 0.00 0.00 4.34
42 43 5.464389 GGCGTTGGTGAGAATATATTTACGT 59.536 40.000 0.00 0.00 0.00 3.57
43 44 5.388061 CGGCGTTGGTGAGAATATATTTACG 60.388 44.000 0.00 0.00 0.00 3.18
44 45 5.107220 CCGGCGTTGGTGAGAATATATTTAC 60.107 44.000 6.01 0.44 0.00 2.01
45 46 4.992319 CCGGCGTTGGTGAGAATATATTTA 59.008 41.667 6.01 0.00 0.00 1.40
46 47 3.813166 CCGGCGTTGGTGAGAATATATTT 59.187 43.478 6.01 0.00 0.00 1.40
47 48 3.399330 CCGGCGTTGGTGAGAATATATT 58.601 45.455 6.01 0.00 0.00 1.28
48 49 2.870435 GCCGGCGTTGGTGAGAATATAT 60.870 50.000 12.58 0.00 0.00 0.86
49 50 1.539496 GCCGGCGTTGGTGAGAATATA 60.539 52.381 12.58 0.00 0.00 0.86
50 51 0.814010 GCCGGCGTTGGTGAGAATAT 60.814 55.000 12.58 0.00 0.00 1.28
51 52 1.448893 GCCGGCGTTGGTGAGAATA 60.449 57.895 12.58 0.00 0.00 1.75
52 53 2.746277 GCCGGCGTTGGTGAGAAT 60.746 61.111 12.58 0.00 0.00 2.40
75 76 4.864334 CCCAGTCATCGCCCTGCC 62.864 72.222 0.00 0.00 0.00 4.85
76 77 4.101448 ACCCAGTCATCGCCCTGC 62.101 66.667 0.00 0.00 0.00 4.85
77 78 2.187946 GACCCAGTCATCGCCCTG 59.812 66.667 0.00 0.00 32.09 4.45
78 79 3.083997 GGACCCAGTCATCGCCCT 61.084 66.667 0.00 0.00 33.68 5.19
79 80 3.391665 CTGGACCCAGTCATCGCCC 62.392 68.421 7.88 0.00 39.10 6.13
80 81 2.187946 CTGGACCCAGTCATCGCC 59.812 66.667 7.88 0.00 39.10 5.54
81 82 2.512515 GCTGGACCCAGTCATCGC 60.513 66.667 16.61 0.00 45.24 4.58
82 83 1.153489 CAGCTGGACCCAGTCATCG 60.153 63.158 16.61 0.00 45.24 3.84
83 84 0.835941 ATCAGCTGGACCCAGTCATC 59.164 55.000 15.13 1.18 45.24 2.92
84 85 0.835941 GATCAGCTGGACCCAGTCAT 59.164 55.000 15.13 6.99 45.24 3.06
85 86 0.545071 TGATCAGCTGGACCCAGTCA 60.545 55.000 15.13 9.81 45.24 3.41
86 87 0.107945 GTGATCAGCTGGACCCAGTC 60.108 60.000 15.13 9.51 45.24 3.51
87 88 1.892819 CGTGATCAGCTGGACCCAGT 61.893 60.000 15.13 2.24 45.24 4.00
88 89 1.153489 CGTGATCAGCTGGACCCAG 60.153 63.158 15.13 11.59 46.15 4.45
89 90 1.191489 TTCGTGATCAGCTGGACCCA 61.191 55.000 15.13 4.08 0.00 4.51
90 91 0.179000 ATTCGTGATCAGCTGGACCC 59.821 55.000 15.13 1.32 0.00 4.46
91 92 1.936547 GAATTCGTGATCAGCTGGACC 59.063 52.381 15.13 3.93 0.00 4.46
92 93 2.621338 TGAATTCGTGATCAGCTGGAC 58.379 47.619 15.13 8.92 0.00 4.02
93 94 3.118665 TCATGAATTCGTGATCAGCTGGA 60.119 43.478 23.51 0.00 37.00 3.86
94 95 3.002042 GTCATGAATTCGTGATCAGCTGG 59.998 47.826 28.37 0.00 43.04 4.85
95 96 3.869832 AGTCATGAATTCGTGATCAGCTG 59.130 43.478 28.37 7.63 43.04 4.24
96 97 3.869832 CAGTCATGAATTCGTGATCAGCT 59.130 43.478 28.37 19.23 43.04 4.24
97 98 3.002042 CCAGTCATGAATTCGTGATCAGC 59.998 47.826 28.37 17.57 43.04 4.26
98 99 3.558829 CCCAGTCATGAATTCGTGATCAG 59.441 47.826 28.37 20.72 43.04 2.90
99 100 3.055167 ACCCAGTCATGAATTCGTGATCA 60.055 43.478 28.37 8.33 43.04 2.92
100 101 3.535561 ACCCAGTCATGAATTCGTGATC 58.464 45.455 28.37 21.53 43.04 2.92
101 102 3.535561 GACCCAGTCATGAATTCGTGAT 58.464 45.455 28.37 15.30 43.04 3.06
102 103 2.354704 GGACCCAGTCATGAATTCGTGA 60.355 50.000 23.51 23.51 39.38 4.35
103 104 2.009774 GGACCCAGTCATGAATTCGTG 58.990 52.381 19.75 19.75 33.68 4.35
104 105 1.628340 TGGACCCAGTCATGAATTCGT 59.372 47.619 0.00 0.00 33.68 3.85
105 106 2.283298 CTGGACCCAGTCATGAATTCG 58.717 52.381 7.88 0.00 39.10 3.34
106 107 2.019984 GCTGGACCCAGTCATGAATTC 58.980 52.381 16.61 0.00 45.24 2.17
107 108 1.679944 CGCTGGACCCAGTCATGAATT 60.680 52.381 16.61 0.00 45.24 2.17
108 109 0.107508 CGCTGGACCCAGTCATGAAT 60.108 55.000 16.61 0.00 45.24 2.57
109 110 1.191489 TCGCTGGACCCAGTCATGAA 61.191 55.000 16.61 0.00 45.24 2.57
110 111 0.977627 ATCGCTGGACCCAGTCATGA 60.978 55.000 16.61 10.32 45.24 3.07
111 112 0.531532 GATCGCTGGACCCAGTCATG 60.532 60.000 16.61 5.84 45.24 3.07
112 113 1.826024 GATCGCTGGACCCAGTCAT 59.174 57.895 16.61 9.21 45.24 3.06
113 114 2.710902 CGATCGCTGGACCCAGTCA 61.711 63.158 16.61 4.97 45.24 3.41
114 115 1.739338 ATCGATCGCTGGACCCAGTC 61.739 60.000 11.09 8.69 45.24 3.51
115 116 0.467474 TATCGATCGCTGGACCCAGT 60.467 55.000 11.09 0.00 45.24 4.00
116 117 0.891373 ATATCGATCGCTGGACCCAG 59.109 55.000 11.09 11.59 46.15 4.45
117 118 1.338107 AATATCGATCGCTGGACCCA 58.662 50.000 11.09 0.00 0.00 4.51
118 119 2.457366 AAATATCGATCGCTGGACCC 57.543 50.000 11.09 0.00 0.00 4.46
119 120 2.480419 CCAAAATATCGATCGCTGGACC 59.520 50.000 11.09 0.00 0.00 4.46
120 121 3.059597 CACCAAAATATCGATCGCTGGAC 60.060 47.826 11.09 0.00 0.00 4.02
121 122 3.130633 CACCAAAATATCGATCGCTGGA 58.869 45.455 11.09 0.00 0.00 3.86
122 123 2.224079 CCACCAAAATATCGATCGCTGG 59.776 50.000 11.09 11.58 0.00 4.85
123 124 2.872245 ACCACCAAAATATCGATCGCTG 59.128 45.455 11.09 0.60 0.00 5.18
124 125 2.872245 CACCACCAAAATATCGATCGCT 59.128 45.455 11.09 2.76 0.00 4.93
125 126 2.602217 GCACCACCAAAATATCGATCGC 60.602 50.000 11.09 0.00 0.00 4.58
126 127 2.611751 TGCACCACCAAAATATCGATCG 59.388 45.455 9.36 9.36 0.00 3.69
127 128 4.036734 ACATGCACCACCAAAATATCGATC 59.963 41.667 0.00 0.00 0.00 3.69
128 129 3.953612 ACATGCACCACCAAAATATCGAT 59.046 39.130 2.16 2.16 0.00 3.59
129 130 3.128415 CACATGCACCACCAAAATATCGA 59.872 43.478 0.00 0.00 0.00 3.59
130 131 3.128415 TCACATGCACCACCAAAATATCG 59.872 43.478 0.00 0.00 0.00 2.92
131 132 4.423732 GTCACATGCACCACCAAAATATC 58.576 43.478 0.00 0.00 0.00 1.63
132 133 3.195396 GGTCACATGCACCACCAAAATAT 59.805 43.478 9.18 0.00 33.63 1.28
133 134 2.560542 GGTCACATGCACCACCAAAATA 59.439 45.455 9.18 0.00 33.63 1.40
134 135 1.344114 GGTCACATGCACCACCAAAAT 59.656 47.619 9.18 0.00 33.63 1.82
135 136 0.749649 GGTCACATGCACCACCAAAA 59.250 50.000 9.18 0.00 33.63 2.44
136 137 0.106268 AGGTCACATGCACCACCAAA 60.106 50.000 15.21 0.00 36.23 3.28
137 138 0.106268 AAGGTCACATGCACCACCAA 60.106 50.000 15.21 0.00 36.23 3.67
138 139 0.537143 GAAGGTCACATGCACCACCA 60.537 55.000 15.21 0.00 36.23 4.17
139 140 1.244019 GGAAGGTCACATGCACCACC 61.244 60.000 15.21 13.37 36.23 4.61
140 141 1.244019 GGGAAGGTCACATGCACCAC 61.244 60.000 15.21 9.22 36.23 4.16
141 142 1.074775 GGGAAGGTCACATGCACCA 59.925 57.895 15.21 0.00 36.23 4.17
142 143 0.251341 AAGGGAAGGTCACATGCACC 60.251 55.000 6.34 6.34 0.00 5.01
143 144 0.883833 CAAGGGAAGGTCACATGCAC 59.116 55.000 0.00 0.00 0.00 4.57
144 145 0.478072 ACAAGGGAAGGTCACATGCA 59.522 50.000 0.00 0.00 0.00 3.96
145 146 1.168714 GACAAGGGAAGGTCACATGC 58.831 55.000 0.00 0.00 34.22 4.06
146 147 2.566833 TGACAAGGGAAGGTCACATG 57.433 50.000 0.00 0.00 39.00 3.21
147 148 3.117512 ACTTTGACAAGGGAAGGTCACAT 60.118 43.478 2.08 0.00 43.22 3.21
148 149 2.241176 ACTTTGACAAGGGAAGGTCACA 59.759 45.455 2.08 0.00 43.22 3.58
149 150 2.879026 GACTTTGACAAGGGAAGGTCAC 59.121 50.000 2.08 0.00 43.22 3.67
150 151 2.158667 GGACTTTGACAAGGGAAGGTCA 60.159 50.000 2.08 0.00 41.93 4.02
151 152 2.158667 TGGACTTTGACAAGGGAAGGTC 60.159 50.000 2.08 0.00 33.82 3.85
152 153 1.850345 TGGACTTTGACAAGGGAAGGT 59.150 47.619 2.08 0.00 33.82 3.50
153 154 2.230660 GTGGACTTTGACAAGGGAAGG 58.769 52.381 2.08 0.00 33.82 3.46
154 155 1.873591 CGTGGACTTTGACAAGGGAAG 59.126 52.381 2.08 0.00 33.82 3.46
155 156 1.210967 ACGTGGACTTTGACAAGGGAA 59.789 47.619 2.08 0.00 33.82 3.97
156 157 0.834612 ACGTGGACTTTGACAAGGGA 59.165 50.000 2.08 0.00 33.82 4.20
157 158 1.226746 GACGTGGACTTTGACAAGGG 58.773 55.000 0.00 0.00 33.82 3.95
158 159 0.859232 CGACGTGGACTTTGACAAGG 59.141 55.000 0.00 0.00 33.82 3.61
159 160 1.521423 GACGACGTGGACTTTGACAAG 59.479 52.381 4.58 0.00 35.92 3.16
160 161 1.135527 AGACGACGTGGACTTTGACAA 59.864 47.619 4.58 0.00 0.00 3.18
161 162 0.742505 AGACGACGTGGACTTTGACA 59.257 50.000 4.58 0.00 0.00 3.58
162 163 1.849097 AAGACGACGTGGACTTTGAC 58.151 50.000 4.58 0.00 0.00 3.18
163 164 3.571571 CATAAGACGACGTGGACTTTGA 58.428 45.455 18.59 4.46 0.00 2.69
164 165 2.092211 GCATAAGACGACGTGGACTTTG 59.908 50.000 18.59 16.15 0.00 2.77
165 166 2.029290 AGCATAAGACGACGTGGACTTT 60.029 45.455 18.59 6.23 0.00 2.66
166 167 1.544691 AGCATAAGACGACGTGGACTT 59.455 47.619 17.69 17.69 0.00 3.01
167 168 1.135373 CAGCATAAGACGACGTGGACT 60.135 52.381 4.58 0.00 0.00 3.85
168 169 1.269166 CAGCATAAGACGACGTGGAC 58.731 55.000 4.58 0.00 0.00 4.02
169 170 0.885879 ACAGCATAAGACGACGTGGA 59.114 50.000 4.58 0.00 0.00 4.02
170 171 1.390123 CAACAGCATAAGACGACGTGG 59.610 52.381 4.58 0.00 0.00 4.94
171 172 1.390123 CCAACAGCATAAGACGACGTG 59.610 52.381 4.58 0.00 0.00 4.49
172 173 1.271379 TCCAACAGCATAAGACGACGT 59.729 47.619 0.00 0.00 0.00 4.34
173 174 1.990799 TCCAACAGCATAAGACGACG 58.009 50.000 0.00 0.00 0.00 5.12
174 175 3.932710 TGATTCCAACAGCATAAGACGAC 59.067 43.478 0.00 0.00 0.00 4.34
175 176 4.200838 TGATTCCAACAGCATAAGACGA 57.799 40.909 0.00 0.00 0.00 4.20
176 177 4.260907 CCATGATTCCAACAGCATAAGACG 60.261 45.833 0.00 0.00 0.00 4.18
177 178 4.883585 TCCATGATTCCAACAGCATAAGAC 59.116 41.667 0.00 0.00 0.00 3.01
178 179 5.114764 TCCATGATTCCAACAGCATAAGA 57.885 39.130 0.00 0.00 0.00 2.10
179 180 5.840243 TTCCATGATTCCAACAGCATAAG 57.160 39.130 0.00 0.00 0.00 1.73
180 181 5.716228 ACTTTCCATGATTCCAACAGCATAA 59.284 36.000 0.00 0.00 0.00 1.90
181 182 5.125900 CACTTTCCATGATTCCAACAGCATA 59.874 40.000 0.00 0.00 0.00 3.14
182 183 4.081862 CACTTTCCATGATTCCAACAGCAT 60.082 41.667 0.00 0.00 0.00 3.79
183 184 3.256383 CACTTTCCATGATTCCAACAGCA 59.744 43.478 0.00 0.00 0.00 4.41
207 209 9.636879 CAATCGAAGTCATCATATGTTATCTCT 57.363 33.333 1.90 0.00 0.00 3.10
241 243 2.907696 TCAAGACCGGGTAATCCAAAGA 59.092 45.455 6.32 0.00 34.36 2.52
242 244 3.343941 TCAAGACCGGGTAATCCAAAG 57.656 47.619 6.32 0.00 34.36 2.77
249 251 0.604578 CGGAGTTCAAGACCGGGTAA 59.395 55.000 6.32 0.00 42.48 2.85
263 265 1.437397 TAAGGTTTTCACCCCGGAGT 58.563 50.000 0.73 0.00 45.63 3.85
288 290 3.054213 GCCAAGTATAACCAACTGGGGTA 60.054 47.826 0.00 0.00 44.89 3.69
325 327 0.035036 TCAACGGGGTAACGATGCAA 59.965 50.000 0.00 0.00 36.71 4.08
329 331 1.619827 TGTCTTCAACGGGGTAACGAT 59.380 47.619 0.00 0.00 37.61 3.73
347 349 2.694628 TCAAGCAAACTCCAAGCAATGT 59.305 40.909 0.00 0.00 0.00 2.71
377 381 2.017049 GATCGTGGATTTTCACCCTGG 58.983 52.381 0.00 0.00 34.36 4.45
389 393 3.007940 ACCATTGAAAGTCAGATCGTGGA 59.992 43.478 0.00 0.00 31.87 4.02
402 406 4.935205 CGTCACCTAATCTGACCATTGAAA 59.065 41.667 0.00 0.00 35.54 2.69
406 410 4.405680 TCATCGTCACCTAATCTGACCATT 59.594 41.667 0.00 0.00 35.54 3.16
412 416 2.728318 CGCATCATCGTCACCTAATCTG 59.272 50.000 0.00 0.00 0.00 2.90
413 417 2.362397 ACGCATCATCGTCACCTAATCT 59.638 45.455 0.00 0.00 38.44 2.40
417 421 0.815095 ACACGCATCATCGTCACCTA 59.185 50.000 0.00 0.00 41.21 3.08
418 422 0.737367 CACACGCATCATCGTCACCT 60.737 55.000 0.00 0.00 41.21 4.00
433 437 1.021968 AGAAAGGGAACGTTGCACAC 58.978 50.000 21.74 9.34 36.19 3.82
450 455 3.692101 TCTCCAAAAGCAACGTTTTCAGA 59.308 39.130 0.00 0.00 0.00 3.27
456 461 0.668535 GGCTCTCCAAAAGCAACGTT 59.331 50.000 0.00 0.00 41.66 3.99
457 462 0.179018 AGGCTCTCCAAAAGCAACGT 60.179 50.000 0.00 0.00 41.66 3.99
473 479 1.271597 ACACAGGACCATGAGAAAGGC 60.272 52.381 0.00 0.00 0.00 4.35
505 512 0.313043 AACGATCAACGACACCGACT 59.687 50.000 0.00 0.00 45.77 4.18
508 516 0.856641 AACAACGATCAACGACACCG 59.143 50.000 0.00 0.00 45.77 4.94
516 524 5.571277 TCGACGATATACAACAACGATCAA 58.429 37.500 0.00 0.00 0.00 2.57
519 527 5.624081 GTGATCGACGATATACAACAACGAT 59.376 40.000 10.97 0.00 40.87 3.73
569 582 8.558973 AAAATATGTCAAGGTGAGAAGAGAAG 57.441 34.615 0.00 0.00 0.00 2.85
572 585 6.036517 CCGAAAATATGTCAAGGTGAGAAGAG 59.963 42.308 0.00 0.00 0.00 2.85
574 587 5.643777 ACCGAAAATATGTCAAGGTGAGAAG 59.356 40.000 0.00 0.00 0.00 2.85
577 590 5.880054 AACCGAAAATATGTCAAGGTGAG 57.120 39.130 0.00 0.00 0.00 3.51
599 612 9.845740 TGATGGCAAAGAGCTAAGTTATATAAA 57.154 29.630 0.00 0.00 44.79 1.40
606 619 4.592942 TGATGATGGCAAAGAGCTAAGTT 58.407 39.130 0.00 0.00 44.79 2.66
611 624 2.584236 GGATGATGATGGCAAAGAGCT 58.416 47.619 0.00 0.00 44.79 4.09
615 628 0.040692 CGCGGATGATGATGGCAAAG 60.041 55.000 0.00 0.00 0.00 2.77
623 636 2.100031 GCACACACGCGGATGATGA 61.100 57.895 17.48 0.00 0.00 2.92
632 645 1.083657 CTAACACACGCACACACGC 60.084 57.895 0.00 0.00 36.19 5.34
633 646 0.043396 CACTAACACACGCACACACG 60.043 55.000 0.00 0.00 39.50 4.49
682 695 3.857157 ATCACAATAAGCATACCCGGT 57.143 42.857 0.00 0.00 0.00 5.28
689 702 6.992123 TCGAAGGATACAATCACAATAAGCAT 59.008 34.615 0.00 0.00 41.41 3.79
758 774 1.869767 CACTGAGCAGCGAGAGTTTTT 59.130 47.619 0.00 0.00 0.00 1.94
759 775 1.506493 CACTGAGCAGCGAGAGTTTT 58.494 50.000 0.00 0.00 0.00 2.43
760 776 0.948141 GCACTGAGCAGCGAGAGTTT 60.948 55.000 0.00 0.00 44.79 2.66
761 777 1.373999 GCACTGAGCAGCGAGAGTT 60.374 57.895 0.00 0.00 44.79 3.01
762 778 2.261052 GCACTGAGCAGCGAGAGT 59.739 61.111 0.00 0.00 44.79 3.24
778 794 2.103538 CGGCCATTGTGCTGATGC 59.896 61.111 2.24 0.00 40.15 3.91
779 795 1.940883 AAGCGGCCATTGTGCTGATG 61.941 55.000 2.24 0.00 40.15 3.07
780 796 1.660560 GAAGCGGCCATTGTGCTGAT 61.661 55.000 2.24 1.53 40.15 2.90
781 797 2.282391 AAGCGGCCATTGTGCTGA 60.282 55.556 2.24 0.00 40.15 4.26
782 798 2.180017 GAAGCGGCCATTGTGCTG 59.820 61.111 2.24 2.61 39.30 4.41
783 799 2.282391 TGAAGCGGCCATTGTGCT 60.282 55.556 2.24 0.00 41.60 4.40
784 800 2.126346 GTGAAGCGGCCATTGTGC 60.126 61.111 2.24 0.00 0.00 4.57
785 801 2.568090 GGTGAAGCGGCCATTGTG 59.432 61.111 2.24 0.00 0.00 3.33
786 802 2.676471 GGGTGAAGCGGCCATTGT 60.676 61.111 2.24 0.00 0.00 2.71
787 803 2.676121 TGGGTGAAGCGGCCATTG 60.676 61.111 2.24 0.00 0.00 2.82
788 804 2.676471 GTGGGTGAAGCGGCCATT 60.676 61.111 2.24 0.00 0.00 3.16
794 810 2.343163 TTTTTGGCGTGGGTGAAGCG 62.343 55.000 0.00 0.00 0.00 4.68
795 811 0.874175 GTTTTTGGCGTGGGTGAAGC 60.874 55.000 0.00 0.00 0.00 3.86
796 812 0.744281 AGTTTTTGGCGTGGGTGAAG 59.256 50.000 0.00 0.00 0.00 3.02
797 813 0.741915 GAGTTTTTGGCGTGGGTGAA 59.258 50.000 0.00 0.00 0.00 3.18
798 814 0.394488 TGAGTTTTTGGCGTGGGTGA 60.394 50.000 0.00 0.00 0.00 4.02
799 815 0.673437 ATGAGTTTTTGGCGTGGGTG 59.327 50.000 0.00 0.00 0.00 4.61
800 816 0.958822 GATGAGTTTTTGGCGTGGGT 59.041 50.000 0.00 0.00 0.00 4.51
801 817 1.247567 AGATGAGTTTTTGGCGTGGG 58.752 50.000 0.00 0.00 0.00 4.61
802 818 3.052036 CAAAGATGAGTTTTTGGCGTGG 58.948 45.455 0.00 0.00 32.13 4.94
803 819 3.730715 GTCAAAGATGAGTTTTTGGCGTG 59.269 43.478 0.00 0.00 35.88 5.34
804 820 3.632145 AGTCAAAGATGAGTTTTTGGCGT 59.368 39.130 0.00 0.00 42.19 5.68
805 821 4.228912 AGTCAAAGATGAGTTTTTGGCG 57.771 40.909 0.00 0.00 42.19 5.69
806 822 5.157067 GCTAGTCAAAGATGAGTTTTTGGC 58.843 41.667 0.00 0.00 39.87 4.52
807 823 6.145535 GTGCTAGTCAAAGATGAGTTTTTGG 58.854 40.000 0.00 0.00 39.87 3.28
808 824 5.848036 CGTGCTAGTCAAAGATGAGTTTTTG 59.152 40.000 0.00 0.00 39.87 2.44
809 825 5.527582 ACGTGCTAGTCAAAGATGAGTTTTT 59.472 36.000 0.00 0.00 39.87 1.94
810 826 5.057149 ACGTGCTAGTCAAAGATGAGTTTT 58.943 37.500 0.00 0.00 39.87 2.43
811 827 4.632153 ACGTGCTAGTCAAAGATGAGTTT 58.368 39.130 0.00 0.00 39.87 2.66
812 828 4.258702 ACGTGCTAGTCAAAGATGAGTT 57.741 40.909 0.00 0.00 39.87 3.01
813 829 3.944055 ACGTGCTAGTCAAAGATGAGT 57.056 42.857 0.00 0.00 42.01 3.41
814 830 4.559251 GTGTACGTGCTAGTCAAAGATGAG 59.441 45.833 4.97 0.00 35.88 2.90
815 831 4.217767 AGTGTACGTGCTAGTCAAAGATGA 59.782 41.667 4.97 0.00 0.00 2.92
816 832 4.486090 AGTGTACGTGCTAGTCAAAGATG 58.514 43.478 4.97 0.00 0.00 2.90
817 833 4.380655 GGAGTGTACGTGCTAGTCAAAGAT 60.381 45.833 4.97 0.00 0.00 2.40
818 834 3.057736 GGAGTGTACGTGCTAGTCAAAGA 60.058 47.826 4.97 0.00 0.00 2.52
819 835 3.243336 GGAGTGTACGTGCTAGTCAAAG 58.757 50.000 4.97 0.00 0.00 2.77
820 836 2.624364 TGGAGTGTACGTGCTAGTCAAA 59.376 45.455 4.97 0.00 0.00 2.69
821 837 2.232399 TGGAGTGTACGTGCTAGTCAA 58.768 47.619 4.97 0.00 0.00 3.18
822 838 1.900245 TGGAGTGTACGTGCTAGTCA 58.100 50.000 4.97 0.00 0.00 3.41
823 839 2.479730 CCATGGAGTGTACGTGCTAGTC 60.480 54.545 5.56 4.08 0.00 2.59
824 840 1.476891 CCATGGAGTGTACGTGCTAGT 59.523 52.381 5.56 0.00 0.00 2.57
825 841 1.802880 GCCATGGAGTGTACGTGCTAG 60.803 57.143 18.40 0.00 0.00 3.42
826 842 0.174845 GCCATGGAGTGTACGTGCTA 59.825 55.000 18.40 0.00 0.00 3.49
827 843 1.079127 GCCATGGAGTGTACGTGCT 60.079 57.895 18.40 0.00 0.00 4.40
828 844 1.375396 TGCCATGGAGTGTACGTGC 60.375 57.895 18.40 0.00 0.00 5.34
829 845 1.351430 CGTGCCATGGAGTGTACGTG 61.351 60.000 18.40 0.00 34.08 4.49
830 846 1.080093 CGTGCCATGGAGTGTACGT 60.080 57.895 18.40 0.00 34.08 3.57
831 847 1.809619 CCGTGCCATGGAGTGTACG 60.810 63.158 18.40 15.99 36.71 3.67
832 848 2.106683 GCCGTGCCATGGAGTGTAC 61.107 63.158 18.40 4.75 0.00 2.90
833 849 2.118233 TTGCCGTGCCATGGAGTGTA 62.118 55.000 18.40 0.00 0.00 2.90
834 850 3.490031 TTGCCGTGCCATGGAGTGT 62.490 57.895 18.40 0.00 0.00 3.55
835 851 2.672651 TTGCCGTGCCATGGAGTG 60.673 61.111 18.40 2.94 0.00 3.51
836 852 2.360350 CTTGCCGTGCCATGGAGT 60.360 61.111 18.40 0.00 0.00 3.85
837 853 3.136123 CCTTGCCGTGCCATGGAG 61.136 66.667 18.40 5.57 33.18 3.86
841 857 4.802051 ATCGCCTTGCCGTGCCAT 62.802 61.111 0.00 0.00 0.00 4.40
848 864 4.802051 TCCAGCCATCGCCTTGCC 62.802 66.667 0.00 0.00 34.57 4.52
849 865 3.512516 GTCCAGCCATCGCCTTGC 61.513 66.667 0.00 0.00 34.57 4.01
850 866 2.825836 GGTCCAGCCATCGCCTTG 60.826 66.667 0.00 0.00 37.17 3.61
851 867 4.115199 GGGTCCAGCCATCGCCTT 62.115 66.667 0.00 0.00 39.65 4.35
853 869 4.864334 CAGGGTCCAGCCATCGCC 62.864 72.222 0.00 0.00 39.65 5.54
854 870 4.864334 CCAGGGTCCAGCCATCGC 62.864 72.222 0.00 0.00 39.65 4.58
855 871 3.083349 TCCAGGGTCCAGCCATCG 61.083 66.667 0.00 0.00 39.65 3.84
856 872 1.852157 TTGTCCAGGGTCCAGCCATC 61.852 60.000 0.00 0.00 39.65 3.51
857 873 1.434513 TTTGTCCAGGGTCCAGCCAT 61.435 55.000 0.00 0.00 39.65 4.40
858 874 1.434513 ATTTGTCCAGGGTCCAGCCA 61.435 55.000 0.00 0.00 39.65 4.75
859 875 0.251787 AATTTGTCCAGGGTCCAGCC 60.252 55.000 0.00 0.00 0.00 4.85
860 876 1.273327 CAAATTTGTCCAGGGTCCAGC 59.727 52.381 10.15 0.00 0.00 4.85
861 877 2.558359 GTCAAATTTGTCCAGGGTCCAG 59.442 50.000 17.47 0.00 0.00 3.86
862 878 2.176798 AGTCAAATTTGTCCAGGGTCCA 59.823 45.455 17.47 0.00 0.00 4.02
863 879 2.558359 CAGTCAAATTTGTCCAGGGTCC 59.442 50.000 17.47 0.00 0.00 4.46
864 880 2.029918 GCAGTCAAATTTGTCCAGGGTC 60.030 50.000 17.47 1.17 0.00 4.46
865 881 1.963515 GCAGTCAAATTTGTCCAGGGT 59.036 47.619 17.47 0.00 0.00 4.34
866 882 1.273327 GGCAGTCAAATTTGTCCAGGG 59.727 52.381 17.47 4.35 0.00 4.45
867 883 2.242043 AGGCAGTCAAATTTGTCCAGG 58.758 47.619 17.47 6.54 0.00 4.45
868 884 3.553508 CCAAGGCAGTCAAATTTGTCCAG 60.554 47.826 17.47 9.08 0.00 3.86
869 885 2.364970 CCAAGGCAGTCAAATTTGTCCA 59.635 45.455 17.47 0.00 0.00 4.02
870 886 2.627699 TCCAAGGCAGTCAAATTTGTCC 59.372 45.455 17.47 13.64 0.00 4.02
871 887 4.320608 TTCCAAGGCAGTCAAATTTGTC 57.679 40.909 17.47 12.30 0.00 3.18
872 888 4.751767 TTTCCAAGGCAGTCAAATTTGT 57.248 36.364 17.47 0.00 0.00 2.83
873 889 5.502220 CGTTTTTCCAAGGCAGTCAAATTTG 60.502 40.000 12.15 12.15 0.00 2.32
874 890 4.570369 CGTTTTTCCAAGGCAGTCAAATTT 59.430 37.500 0.00 0.00 0.00 1.82
875 891 4.119136 CGTTTTTCCAAGGCAGTCAAATT 58.881 39.130 0.00 0.00 0.00 1.82
876 892 3.132111 ACGTTTTTCCAAGGCAGTCAAAT 59.868 39.130 0.00 0.00 0.00 2.32
877 893 2.494073 ACGTTTTTCCAAGGCAGTCAAA 59.506 40.909 0.00 0.00 0.00 2.69
878 894 2.096248 ACGTTTTTCCAAGGCAGTCAA 58.904 42.857 0.00 0.00 0.00 3.18
879 895 1.757682 ACGTTTTTCCAAGGCAGTCA 58.242 45.000 0.00 0.00 0.00 3.41
880 896 3.821841 CATACGTTTTTCCAAGGCAGTC 58.178 45.455 0.00 0.00 0.00 3.51
881 897 2.030274 GCATACGTTTTTCCAAGGCAGT 60.030 45.455 0.00 0.00 0.00 4.40
882 898 2.228822 AGCATACGTTTTTCCAAGGCAG 59.771 45.455 0.00 0.00 0.00 4.85
883 899 2.227865 GAGCATACGTTTTTCCAAGGCA 59.772 45.455 0.00 0.00 0.00 4.75
884 900 2.727916 CGAGCATACGTTTTTCCAAGGC 60.728 50.000 0.00 0.00 0.00 4.35
885 901 2.727916 GCGAGCATACGTTTTTCCAAGG 60.728 50.000 0.00 0.00 35.59 3.61
886 902 2.505866 GCGAGCATACGTTTTTCCAAG 58.494 47.619 0.00 0.00 35.59 3.61
887 903 1.198178 GGCGAGCATACGTTTTTCCAA 59.802 47.619 0.00 0.00 35.59 3.53
888 904 0.800012 GGCGAGCATACGTTTTTCCA 59.200 50.000 0.00 0.00 35.59 3.53
889 905 0.247537 CGGCGAGCATACGTTTTTCC 60.248 55.000 0.00 0.00 35.59 3.13
890 906 0.441145 ACGGCGAGCATACGTTTTTC 59.559 50.000 16.62 0.00 37.61 2.29
891 907 0.165079 CACGGCGAGCATACGTTTTT 59.835 50.000 16.62 0.00 39.02 1.94
892 908 1.785321 CACGGCGAGCATACGTTTT 59.215 52.632 16.62 0.00 39.02 2.43
893 909 2.736682 GCACGGCGAGCATACGTTT 61.737 57.895 23.98 0.00 39.02 3.60
894 910 3.186047 GCACGGCGAGCATACGTT 61.186 61.111 23.98 0.00 39.02 3.99
917 933 4.838152 ATGATTCTGGCGCCGCGT 62.838 61.111 23.90 7.64 0.00 6.01
918 934 4.303603 CATGATTCTGGCGCCGCG 62.304 66.667 23.90 15.91 0.00 6.46
919 935 2.180131 GATCATGATTCTGGCGCCGC 62.180 60.000 23.90 0.00 0.00 6.53
920 936 0.881600 TGATCATGATTCTGGCGCCG 60.882 55.000 23.90 16.91 0.00 6.46
921 937 1.531423 ATGATCATGATTCTGGCGCC 58.469 50.000 22.73 22.73 0.00 6.53
922 938 4.754372 TTTATGATCATGATTCTGGCGC 57.246 40.909 18.72 0.00 0.00 6.53
923 939 5.413523 TGGATTTATGATCATGATTCTGGCG 59.586 40.000 18.72 0.00 0.00 5.69
924 940 6.349944 GGTGGATTTATGATCATGATTCTGGC 60.350 42.308 18.72 9.52 0.00 4.85
925 941 6.128090 CGGTGGATTTATGATCATGATTCTGG 60.128 42.308 18.72 4.09 0.00 3.86
926 942 6.622245 GCGGTGGATTTATGATCATGATTCTG 60.622 42.308 18.72 11.50 0.00 3.02
927 943 5.413833 GCGGTGGATTTATGATCATGATTCT 59.586 40.000 18.72 3.01 0.00 2.40
928 944 5.392380 GGCGGTGGATTTATGATCATGATTC 60.392 44.000 18.72 14.70 0.00 2.52
929 945 4.460382 GGCGGTGGATTTATGATCATGATT 59.540 41.667 18.72 6.52 0.00 2.57
930 946 4.012374 GGCGGTGGATTTATGATCATGAT 58.988 43.478 18.72 8.25 0.00 2.45
931 947 3.411446 GGCGGTGGATTTATGATCATGA 58.589 45.455 18.72 7.33 0.00 3.07
932 948 2.489329 GGGCGGTGGATTTATGATCATG 59.511 50.000 18.72 0.00 0.00 3.07
933 949 2.108075 TGGGCGGTGGATTTATGATCAT 59.892 45.455 13.81 13.81 0.00 2.45
934 950 1.492599 TGGGCGGTGGATTTATGATCA 59.507 47.619 0.00 0.00 0.00 2.92
935 951 1.880027 GTGGGCGGTGGATTTATGATC 59.120 52.381 0.00 0.00 0.00 2.92
936 952 1.494721 AGTGGGCGGTGGATTTATGAT 59.505 47.619 0.00 0.00 0.00 2.45
937 953 0.916086 AGTGGGCGGTGGATTTATGA 59.084 50.000 0.00 0.00 0.00 2.15
938 954 1.134098 AGAGTGGGCGGTGGATTTATG 60.134 52.381 0.00 0.00 0.00 1.90
939 955 1.141053 GAGAGTGGGCGGTGGATTTAT 59.859 52.381 0.00 0.00 0.00 1.40
940 956 0.539986 GAGAGTGGGCGGTGGATTTA 59.460 55.000 0.00 0.00 0.00 1.40
941 957 1.299976 GAGAGTGGGCGGTGGATTT 59.700 57.895 0.00 0.00 0.00 2.17
942 958 2.670148 GGAGAGTGGGCGGTGGATT 61.670 63.158 0.00 0.00 0.00 3.01
943 959 3.083997 GGAGAGTGGGCGGTGGAT 61.084 66.667 0.00 0.00 0.00 3.41
945 961 3.976490 TAGGGAGAGTGGGCGGTGG 62.976 68.421 0.00 0.00 0.00 4.61
946 962 2.363795 TAGGGAGAGTGGGCGGTG 60.364 66.667 0.00 0.00 0.00 4.94
947 963 2.363925 GTAGGGAGAGTGGGCGGT 60.364 66.667 0.00 0.00 0.00 5.68
948 964 2.042843 AGTAGGGAGAGTGGGCGG 60.043 66.667 0.00 0.00 0.00 6.13
949 965 1.379977 TGAGTAGGGAGAGTGGGCG 60.380 63.158 0.00 0.00 0.00 6.13
950 966 0.324830 AGTGAGTAGGGAGAGTGGGC 60.325 60.000 0.00 0.00 0.00 5.36
951 967 1.686741 GGAGTGAGTAGGGAGAGTGGG 60.687 61.905 0.00 0.00 0.00 4.61
952 968 1.006043 TGGAGTGAGTAGGGAGAGTGG 59.994 57.143 0.00 0.00 0.00 4.00
953 969 2.096248 GTGGAGTGAGTAGGGAGAGTG 58.904 57.143 0.00 0.00 0.00 3.51
954 970 1.711375 TGTGGAGTGAGTAGGGAGAGT 59.289 52.381 0.00 0.00 0.00 3.24
955 971 2.096248 GTGTGGAGTGAGTAGGGAGAG 58.904 57.143 0.00 0.00 0.00 3.20
956 972 1.427753 TGTGTGGAGTGAGTAGGGAGA 59.572 52.381 0.00 0.00 0.00 3.71
957 973 1.924731 TGTGTGGAGTGAGTAGGGAG 58.075 55.000 0.00 0.00 0.00 4.30
958 974 1.968493 GTTGTGTGGAGTGAGTAGGGA 59.032 52.381 0.00 0.00 0.00 4.20
959 975 1.002087 GGTTGTGTGGAGTGAGTAGGG 59.998 57.143 0.00 0.00 0.00 3.53
960 976 1.691976 TGGTTGTGTGGAGTGAGTAGG 59.308 52.381 0.00 0.00 0.00 3.18
961 977 3.469008 TTGGTTGTGTGGAGTGAGTAG 57.531 47.619 0.00 0.00 0.00 2.57
962 978 3.055021 TGTTTGGTTGTGTGGAGTGAGTA 60.055 43.478 0.00 0.00 0.00 2.59
963 979 2.290641 TGTTTGGTTGTGTGGAGTGAGT 60.291 45.455 0.00 0.00 0.00 3.41
964 980 2.355756 CTGTTTGGTTGTGTGGAGTGAG 59.644 50.000 0.00 0.00 0.00 3.51
965 981 2.364632 CTGTTTGGTTGTGTGGAGTGA 58.635 47.619 0.00 0.00 0.00 3.41
966 982 1.202290 GCTGTTTGGTTGTGTGGAGTG 60.202 52.381 0.00 0.00 0.00 3.51
967 983 1.102978 GCTGTTTGGTTGTGTGGAGT 58.897 50.000 0.00 0.00 0.00 3.85
968 984 0.385390 GGCTGTTTGGTTGTGTGGAG 59.615 55.000 0.00 0.00 0.00 3.86
969 985 0.323816 TGGCTGTTTGGTTGTGTGGA 60.324 50.000 0.00 0.00 0.00 4.02
970 986 0.534412 TTGGCTGTTTGGTTGTGTGG 59.466 50.000 0.00 0.00 0.00 4.17
971 987 1.476085 TCTTGGCTGTTTGGTTGTGTG 59.524 47.619 0.00 0.00 0.00 3.82
972 988 1.846007 TCTTGGCTGTTTGGTTGTGT 58.154 45.000 0.00 0.00 0.00 3.72
973 989 3.181477 TGAATCTTGGCTGTTTGGTTGTG 60.181 43.478 0.00 0.00 0.00 3.33
974 990 3.030291 TGAATCTTGGCTGTTTGGTTGT 58.970 40.909 0.00 0.00 0.00 3.32
975 991 3.731652 TGAATCTTGGCTGTTTGGTTG 57.268 42.857 0.00 0.00 0.00 3.77
976 992 4.344679 TGATTGAATCTTGGCTGTTTGGTT 59.655 37.500 6.73 0.00 0.00 3.67
977 993 3.896888 TGATTGAATCTTGGCTGTTTGGT 59.103 39.130 6.73 0.00 0.00 3.67
978 994 4.524316 TGATTGAATCTTGGCTGTTTGG 57.476 40.909 6.73 0.00 0.00 3.28
979 995 5.350365 CCATTGATTGAATCTTGGCTGTTTG 59.650 40.000 12.50 0.00 0.00 2.93
980 996 5.484715 CCATTGATTGAATCTTGGCTGTTT 58.515 37.500 12.50 0.00 0.00 2.83
981 997 4.622220 GCCATTGATTGAATCTTGGCTGTT 60.622 41.667 29.11 0.53 46.47 3.16
982 998 3.118884 GCCATTGATTGAATCTTGGCTGT 60.119 43.478 29.11 2.27 46.47 4.40
983 999 3.454375 GCCATTGATTGAATCTTGGCTG 58.546 45.455 29.11 12.51 46.47 4.85
984 1000 3.814005 GCCATTGATTGAATCTTGGCT 57.186 42.857 29.11 3.67 46.47 4.75
986 1002 2.800629 GCGGCCATTGATTGAATCTTGG 60.801 50.000 17.73 17.73 36.77 3.61
987 1003 2.100252 AGCGGCCATTGATTGAATCTTG 59.900 45.455 2.24 4.51 0.00 3.02
988 1004 2.360165 GAGCGGCCATTGATTGAATCTT 59.640 45.455 2.24 0.00 0.00 2.40
989 1005 1.952296 GAGCGGCCATTGATTGAATCT 59.048 47.619 2.24 0.00 0.00 2.40
990 1006 1.952296 AGAGCGGCCATTGATTGAATC 59.048 47.619 2.24 0.00 0.00 2.52
991 1007 1.952296 GAGAGCGGCCATTGATTGAAT 59.048 47.619 2.24 0.00 0.00 2.57
992 1008 1.065199 AGAGAGCGGCCATTGATTGAA 60.065 47.619 2.24 0.00 0.00 2.69
993 1009 0.543277 AGAGAGCGGCCATTGATTGA 59.457 50.000 2.24 0.00 0.00 2.57
994 1010 0.942962 GAGAGAGCGGCCATTGATTG 59.057 55.000 2.24 0.00 0.00 2.67
995 1011 0.543277 TGAGAGAGCGGCCATTGATT 59.457 50.000 2.24 0.00 0.00 2.57
996 1012 0.763652 ATGAGAGAGCGGCCATTGAT 59.236 50.000 2.24 0.00 0.00 2.57
997 1013 0.105593 GATGAGAGAGCGGCCATTGA 59.894 55.000 2.24 0.00 0.00 2.57
998 1014 0.179065 TGATGAGAGAGCGGCCATTG 60.179 55.000 2.24 0.00 0.00 2.82
999 1015 0.179062 GTGATGAGAGAGCGGCCATT 60.179 55.000 2.24 0.00 0.00 3.16
1000 1016 1.445095 GTGATGAGAGAGCGGCCAT 59.555 57.895 2.24 0.00 0.00 4.40
1001 1017 2.725312 GGTGATGAGAGAGCGGCCA 61.725 63.158 2.24 0.00 0.00 5.36
1002 1018 1.965754 AAGGTGATGAGAGAGCGGCC 61.966 60.000 0.00 0.00 0.00 6.13
1003 1019 0.529555 GAAGGTGATGAGAGAGCGGC 60.530 60.000 0.00 0.00 0.00 6.53
1004 1020 0.103937 GGAAGGTGATGAGAGAGCGG 59.896 60.000 0.00 0.00 0.00 5.52
1005 1021 0.103937 GGGAAGGTGATGAGAGAGCG 59.896 60.000 0.00 0.00 0.00 5.03
1006 1022 0.103937 CGGGAAGGTGATGAGAGAGC 59.896 60.000 0.00 0.00 0.00 4.09
1007 1023 1.479709 ACGGGAAGGTGATGAGAGAG 58.520 55.000 0.00 0.00 0.00 3.20
1008 1024 2.820728 TACGGGAAGGTGATGAGAGA 57.179 50.000 0.00 0.00 0.00 3.10
1009 1025 3.639094 AGAATACGGGAAGGTGATGAGAG 59.361 47.826 0.00 0.00 0.00 3.20
1010 1026 3.637229 GAGAATACGGGAAGGTGATGAGA 59.363 47.826 0.00 0.00 0.00 3.27
1011 1027 3.384789 TGAGAATACGGGAAGGTGATGAG 59.615 47.826 0.00 0.00 0.00 2.90
1012 1028 3.371034 TGAGAATACGGGAAGGTGATGA 58.629 45.455 0.00 0.00 0.00 2.92
1013 1029 3.819564 TGAGAATACGGGAAGGTGATG 57.180 47.619 0.00 0.00 0.00 3.07
1014 1030 4.227197 AGATGAGAATACGGGAAGGTGAT 58.773 43.478 0.00 0.00 0.00 3.06
1015 1031 3.643237 AGATGAGAATACGGGAAGGTGA 58.357 45.455 0.00 0.00 0.00 4.02
1016 1032 4.408182 AAGATGAGAATACGGGAAGGTG 57.592 45.455 0.00 0.00 0.00 4.00
1017 1033 6.749036 ATAAAGATGAGAATACGGGAAGGT 57.251 37.500 0.00 0.00 0.00 3.50
1018 1034 7.815068 CAGTATAAAGATGAGAATACGGGAAGG 59.185 40.741 0.00 0.00 31.54 3.46
1019 1035 7.815068 CCAGTATAAAGATGAGAATACGGGAAG 59.185 40.741 5.01 0.00 40.48 3.46
1020 1036 7.289317 ACCAGTATAAAGATGAGAATACGGGAA 59.711 37.037 14.60 0.00 40.48 3.97
1021 1037 6.781014 ACCAGTATAAAGATGAGAATACGGGA 59.219 38.462 14.60 0.00 40.48 5.14
1022 1038 6.994221 ACCAGTATAAAGATGAGAATACGGG 58.006 40.000 8.37 8.37 42.39 5.28
1023 1039 8.794553 AGTACCAGTATAAAGATGAGAATACGG 58.205 37.037 0.00 0.00 31.54 4.02
1034 1050 8.996655 TGGAGAGTAGTAGTACCAGTATAAAGA 58.003 37.037 4.02 0.00 0.00 2.52
1035 1051 9.054922 GTGGAGAGTAGTAGTACCAGTATAAAG 57.945 40.741 4.02 0.00 0.00 1.85
1036 1052 7.995488 GGTGGAGAGTAGTAGTACCAGTATAAA 59.005 40.741 4.02 0.00 0.00 1.40
1037 1053 7.512992 GGTGGAGAGTAGTAGTACCAGTATAA 58.487 42.308 4.02 0.00 0.00 0.98
1038 1054 6.239430 CGGTGGAGAGTAGTAGTACCAGTATA 60.239 46.154 4.02 0.00 0.00 1.47
1039 1055 5.454471 CGGTGGAGAGTAGTAGTACCAGTAT 60.454 48.000 4.02 0.00 0.00 2.12
1040 1056 4.141846 CGGTGGAGAGTAGTAGTACCAGTA 60.142 50.000 4.02 0.00 0.00 2.74
1041 1057 3.370315 CGGTGGAGAGTAGTAGTACCAGT 60.370 52.174 4.02 0.00 0.00 4.00
1042 1058 3.204526 CGGTGGAGAGTAGTAGTACCAG 58.795 54.545 4.02 0.00 0.00 4.00
1043 1059 2.573462 ACGGTGGAGAGTAGTAGTACCA 59.427 50.000 4.02 0.00 0.00 3.25
1044 1060 3.118445 AGACGGTGGAGAGTAGTAGTACC 60.118 52.174 4.02 0.00 0.00 3.34
1045 1061 4.119136 GAGACGGTGGAGAGTAGTAGTAC 58.881 52.174 0.00 0.00 0.00 2.73
1046 1062 3.133721 GGAGACGGTGGAGAGTAGTAGTA 59.866 52.174 0.00 0.00 0.00 1.82
1047 1063 2.093021 GGAGACGGTGGAGAGTAGTAGT 60.093 54.545 0.00 0.00 0.00 2.73
1048 1064 2.563702 GGAGACGGTGGAGAGTAGTAG 58.436 57.143 0.00 0.00 0.00 2.57
1049 1065 2.706339 GGAGACGGTGGAGAGTAGTA 57.294 55.000 0.00 0.00 0.00 1.82
1050 1066 3.573626 GGAGACGGTGGAGAGTAGT 57.426 57.895 0.00 0.00 0.00 2.73
1069 1085 0.168568 GAAGAAGAAGCAGCAGCAGC 59.831 55.000 3.17 0.46 45.49 5.25
1070 1086 1.810959 AGAAGAAGAAGCAGCAGCAG 58.189 50.000 3.17 0.00 45.49 4.24
1071 1087 2.149578 GAAGAAGAAGAAGCAGCAGCA 58.850 47.619 3.17 0.00 45.49 4.41
1072 1088 2.425539 AGAAGAAGAAGAAGCAGCAGC 58.574 47.619 0.00 0.00 42.56 5.25
1073 1089 4.317488 AGAAGAAGAAGAAGAAGCAGCAG 58.683 43.478 0.00 0.00 0.00 4.24
1074 1090 4.348863 AGAAGAAGAAGAAGAAGCAGCA 57.651 40.909 0.00 0.00 0.00 4.41
1075 1091 4.996758 AGAAGAAGAAGAAGAAGAAGCAGC 59.003 41.667 0.00 0.00 0.00 5.25
1076 1092 6.147656 GGAAGAAGAAGAAGAAGAAGAAGCAG 59.852 42.308 0.00 0.00 0.00 4.24
1077 1093 5.994668 GGAAGAAGAAGAAGAAGAAGAAGCA 59.005 40.000 0.00 0.00 0.00 3.91
1078 1094 5.411361 GGGAAGAAGAAGAAGAAGAAGAAGC 59.589 44.000 0.00 0.00 0.00 3.86
1079 1095 5.637387 CGGGAAGAAGAAGAAGAAGAAGAAG 59.363 44.000 0.00 0.00 0.00 2.85
1080 1096 5.070580 ACGGGAAGAAGAAGAAGAAGAAGAA 59.929 40.000 0.00 0.00 0.00 2.52
1083 1099 4.589374 AGACGGGAAGAAGAAGAAGAAGAA 59.411 41.667 0.00 0.00 0.00 2.52
1086 1102 3.895656 TCAGACGGGAAGAAGAAGAAGAA 59.104 43.478 0.00 0.00 0.00 2.52
1102 1118 2.434884 ATTGCCGCTGGTCAGACG 60.435 61.111 1.65 5.21 0.00 4.18
1212 1231 1.476110 CCAACCCAACGACAGAAAGGA 60.476 52.381 0.00 0.00 0.00 3.36
1213 1232 0.951558 CCAACCCAACGACAGAAAGG 59.048 55.000 0.00 0.00 0.00 3.11
1250 1269 0.321671 AGCAGTGACACGTTGCCTAT 59.678 50.000 14.34 0.00 38.58 2.57
1287 1306 1.605058 CCACGGATCCAACGAGAGGT 61.605 60.000 13.41 0.00 34.93 3.85
1341 1360 2.365617 GTTGGTGAGAGTGAGGTTGAGA 59.634 50.000 0.00 0.00 0.00 3.27
1353 1372 1.754745 GCCTGTGAGGTTGGTGAGA 59.245 57.895 0.00 0.00 37.80 3.27
1362 1381 0.967380 GTGGAATTGGGCCTGTGAGG 60.967 60.000 4.53 0.00 38.80 3.86
1484 1503 2.791655 GGTTGAAACCTAGGTCAAGGG 58.208 52.381 16.64 0.00 45.75 3.95
1843 1869 8.978539 TCTATATAGTGAAATAAAGCGCAACAG 58.021 33.333 11.47 0.00 0.00 3.16
1898 1924 0.304705 GTACCGGCATGATTCAAGCG 59.695 55.000 0.00 3.87 0.00 4.68
1993 2020 7.174253 TGTTGTTAGATTGTAAGTTAAGCCAGG 59.826 37.037 0.00 0.00 0.00 4.45
2007 2034 4.220382 TGGGCCAAGAATGTTGTTAGATTG 59.780 41.667 2.13 0.00 0.00 2.67
2008 2035 4.415596 TGGGCCAAGAATGTTGTTAGATT 58.584 39.130 2.13 0.00 0.00 2.40
2072 2099 1.476085 AGACTGCAGTTGGAGAGATCG 59.524 52.381 22.65 0.00 36.93 3.69
2128 2155 8.177378 TGTAAGAGACAGAAACGAGAGTTCCC 62.177 46.154 0.00 0.00 43.16 3.97
2253 2280 3.578688 CTGCAAGTTTCCCTAATGTTGC 58.421 45.455 0.00 0.00 38.27 4.17
2328 2356 1.801178 GCACTGGGAAAGACTCGAAAG 59.199 52.381 0.00 0.00 0.00 2.62
2358 2386 9.096823 AGAATTATTATGTATACCGAGGAACCA 57.903 33.333 0.00 0.00 0.00 3.67
2432 2460 4.965119 ATAACCTGCTCGAAAAATGGTC 57.035 40.909 0.00 0.00 0.00 4.02
2660 2688 4.986659 CCTGAGAATTTGTTTGCTTCAAGG 59.013 41.667 0.00 0.00 0.00 3.61
2861 2889 8.824781 TTCGAAGAGAGATCAATTTGATCAATC 58.175 33.333 31.06 26.78 46.90 2.67
2864 2892 7.326454 AGTTCGAAGAGAGATCAATTTGATCA 58.674 34.615 31.06 12.82 46.90 2.92
2865 2893 7.769272 AGTTCGAAGAGAGATCAATTTGATC 57.231 36.000 25.38 25.38 45.74 2.92
2885 2913 3.942115 GGATGCTTCCTACCAAGAAGTTC 59.058 47.826 11.34 0.00 42.27 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.