Multiple sequence alignment - TraesCS3A01G067700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G067700 chr3A 100.000 4272 0 0 1 4272 40826086 40821815 0.000000e+00 7890.0
1 TraesCS3A01G067700 chr3A 98.514 740 11 0 2529 3268 40692371 40691632 0.000000e+00 1306.0
2 TraesCS3A01G067700 chr3A 98.378 740 12 0 2529 3268 40798366 40797627 0.000000e+00 1301.0
3 TraesCS3A01G067700 chr3A 98.243 740 13 0 2529 3268 40743108 40742369 0.000000e+00 1295.0
4 TraesCS3A01G067700 chr3A 98.108 740 14 0 2529 3268 40731832 40731093 0.000000e+00 1290.0
5 TraesCS3A01G067700 chr3A 97.703 740 13 1 2529 3268 40754377 40753642 0.000000e+00 1269.0
6 TraesCS3A01G067700 chr3D 87.535 1412 98 31 2106 3468 29881227 29879845 0.000000e+00 1561.0
7 TraesCS3A01G067700 chr3D 89.362 611 40 8 3680 4272 486734965 486734362 0.000000e+00 745.0
8 TraesCS3A01G067700 chr3D 86.074 596 68 9 3682 4272 18866416 18867001 1.010000e-175 627.0
9 TraesCS3A01G067700 chr3D 84.733 655 50 31 1065 1683 29882019 29881379 1.020000e-170 610.0
10 TraesCS3A01G067700 chr3D 80.323 620 79 16 3680 4272 223094986 223094383 3.050000e-116 429.0
11 TraesCS3A01G067700 chr3D 86.996 223 16 11 556 774 29882490 29882277 5.520000e-59 239.0
12 TraesCS3A01G067700 chr3D 94.074 135 7 1 3486 3619 489379015 489379149 2.010000e-48 204.0
13 TraesCS3A01G067700 chr3D 91.935 124 6 1 1954 2073 29881354 29881231 2.040000e-38 171.0
14 TraesCS3A01G067700 chr3D 82.979 141 14 7 109 249 29882603 29882473 7.500000e-23 119.0
15 TraesCS3A01G067700 chr3D 100.000 62 0 0 3620 3681 29879852 29879791 9.710000e-22 115.0
16 TraesCS3A01G067700 chr3B 90.976 953 74 10 2526 3468 50791042 50790092 0.000000e+00 1273.0
17 TraesCS3A01G067700 chr3B 87.032 1041 68 36 567 1589 50793071 50792080 0.000000e+00 1112.0
18 TraesCS3A01G067700 chr3B 85.430 453 48 13 1612 2060 50792092 50791654 5.040000e-124 455.0
19 TraesCS3A01G067700 chr3B 96.703 182 6 0 328 509 693932370 693932551 1.930000e-78 303.0
20 TraesCS3A01G067700 chr3B 96.175 183 7 0 330 512 622079035 622078853 2.500000e-77 300.0
21 TraesCS3A01G067700 chr3B 92.053 151 12 0 3469 3619 715886608 715886458 3.350000e-51 213.0
22 TraesCS3A01G067700 chr3B 86.567 134 9 5 55 181 50793238 50793107 5.760000e-29 139.0
23 TraesCS3A01G067700 chr7A 90.523 612 41 10 3678 4272 3435465 3434854 0.000000e+00 793.0
24 TraesCS3A01G067700 chr7A 92.857 56 4 0 3348 3403 124795689 124795744 9.850000e-12 82.4
25 TraesCS3A01G067700 chr6A 90.148 609 39 11 3682 4272 596334592 596333987 0.000000e+00 773.0
26 TraesCS3A01G067700 chr6A 86.466 133 10 4 3486 3618 114239392 114239516 5.760000e-29 139.0
27 TraesCS3A01G067700 chr2D 89.655 609 44 10 3682 4272 384243109 384243716 0.000000e+00 758.0
28 TraesCS3A01G067700 chr2D 89.474 133 13 1 3486 3618 645852163 645852294 2.640000e-37 167.0
29 TraesCS3A01G067700 chr2A 87.769 605 62 7 3680 4272 286479385 286478781 0.000000e+00 697.0
30 TraesCS3A01G067700 chr2A 96.721 183 6 0 330 512 343510616 343510434 5.370000e-79 305.0
31 TraesCS3A01G067700 chr2A 90.066 151 15 0 3469 3619 767623301 767623151 3.370000e-46 196.0
32 TraesCS3A01G067700 chr2A 93.750 128 8 0 3489 3616 738044831 738044704 4.360000e-45 193.0
33 TraesCS3A01G067700 chr2A 83.333 84 6 4 3350 3428 703974031 703973951 2.130000e-08 71.3
34 TraesCS3A01G067700 chr4A 87.561 619 50 15 3679 4272 125470968 125471584 0.000000e+00 691.0
35 TraesCS3A01G067700 chr4A 91.729 133 8 2 3486 3617 487918574 487918704 9.440000e-42 182.0
36 TraesCS3A01G067700 chr4A 91.803 61 5 0 3343 3403 342448621 342448681 7.610000e-13 86.1
37 TraesCS3A01G067700 chr7D 86.992 615 41 13 3680 4272 277546189 277546786 0.000000e+00 656.0
38 TraesCS3A01G067700 chr7D 86.139 606 64 10 3680 4272 528371920 528372518 1.680000e-178 636.0
39 TraesCS3A01G067700 chr7D 89.738 497 45 4 1580 2073 187341906 187342399 7.800000e-177 630.0
40 TraesCS3A01G067700 chr7D 90.598 117 5 2 2104 2214 187342401 187342517 2.660000e-32 150.0
41 TraesCS3A01G067700 chr1D 86.811 599 64 8 3679 4272 348996059 348996647 0.000000e+00 654.0
42 TraesCS3A01G067700 chr1D 86.386 617 50 16 3682 4271 190485235 190484626 1.000000e-180 643.0
43 TraesCS3A01G067700 chr5A 85.832 607 60 12 3682 4272 650034464 650035060 4.690000e-174 621.0
44 TraesCS3A01G067700 chr5A 100.000 29 0 0 3347 3375 510556715 510556743 2.000000e-03 54.7
45 TraesCS3A01G067700 chr7B 85.526 304 41 3 3969 4272 72617272 72617572 8.920000e-82 315.0
46 TraesCS3A01G067700 chr7B 96.739 184 6 0 326 509 521120870 521121053 1.490000e-79 307.0
47 TraesCS3A01G067700 chr7B 95.628 183 8 0 330 512 380078169 380078351 1.160000e-75 294.0
48 TraesCS3A01G067700 chr7B 88.406 69 7 1 3345 3413 651450499 651450566 9.850000e-12 82.4
49 TraesCS3A01G067700 chr7B 92.453 53 4 0 3351 3403 472327517 472327465 4.580000e-10 76.8
50 TraesCS3A01G067700 chr7B 92.453 53 4 0 3351 3403 472394388 472394336 4.580000e-10 76.8
51 TraesCS3A01G067700 chr7B 95.000 40 2 0 3349 3388 483866419 483866458 3.570000e-06 63.9
52 TraesCS3A01G067700 chr5B 96.721 183 6 0 327 509 252334190 252334372 5.370000e-79 305.0
53 TraesCS3A01G067700 chr5B 95.676 185 8 0 328 512 357161182 357160998 8.980000e-77 298.0
54 TraesCS3A01G067700 chr5B 93.717 191 12 0 322 512 495443727 495443537 1.940000e-73 287.0
55 TraesCS3A01G067700 chr5B 89.552 134 14 0 3486 3619 655432259 655432126 2.040000e-38 171.0
56 TraesCS3A01G067700 chr4B 92.683 205 12 3 305 509 172375264 172375465 4.180000e-75 292.0
57 TraesCS3A01G067700 chr4B 90.446 157 12 3 3468 3622 491460308 491460463 2.010000e-48 204.0
58 TraesCS3A01G067700 chr4B 100.000 29 0 0 3345 3373 612274930 612274902 2.000000e-03 54.7
59 TraesCS3A01G067700 chr6B 92.537 134 8 1 3486 3619 80010047 80010178 1.570000e-44 191.0
60 TraesCS3A01G067700 chr6B 90.511 137 10 1 3486 3619 46674691 46674827 1.220000e-40 178.0
61 TraesCS3A01G067700 chr6B 80.588 170 21 7 2267 2428 303227461 303227626 2.090000e-23 121.0
62 TraesCS3A01G067700 chr6B 84.259 108 7 1 2104 2211 303227333 303227430 3.520000e-16 97.1
63 TraesCS3A01G067700 chr2B 89.781 137 14 0 3486 3622 559188151 559188015 4.390000e-40 176.0
64 TraesCS3A01G067700 chr2B 84.663 163 15 1 3468 3620 38631744 38631906 2.060000e-33 154.0
65 TraesCS3A01G067700 chr4D 89.130 138 14 1 3486 3622 82732086 82732223 2.040000e-38 171.0
66 TraesCS3A01G067700 chr4D 82.609 138 22 2 3486 3621 196016331 196016194 2.090000e-23 121.0
67 TraesCS3A01G067700 chr4D 89.231 65 7 0 3348 3412 370369301 370369237 9.850000e-12 82.4
68 TraesCS3A01G067700 chr4D 100.000 29 0 0 3345 3373 482704213 482704185 2.000000e-03 54.7
69 TraesCS3A01G067700 chrUn 90.909 110 10 0 1955 2064 53021671 53021780 9.570000e-32 148.0
70 TraesCS3A01G067700 chrUn 90.909 110 10 0 1955 2064 294170984 294171093 9.570000e-32 148.0
71 TraesCS3A01G067700 chrUn 86.111 108 5 1 2104 2211 53021795 53021892 1.620000e-19 108.0
72 TraesCS3A01G067700 chrUn 86.111 108 5 1 2104 2211 294171108 294171205 1.620000e-19 108.0
73 TraesCS3A01G067700 chr6D 85.542 83 11 1 248 329 5408988 5409070 7.610000e-13 86.1
74 TraesCS3A01G067700 chr6D 78.333 120 21 4 3467 3586 340441787 340441673 5.930000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G067700 chr3A 40821815 40826086 4271 True 7890.000000 7890 100.000000 1 4272 1 chr3A.!!$R6 4271
1 TraesCS3A01G067700 chr3A 40691632 40692371 739 True 1306.000000 1306 98.514000 2529 3268 1 chr3A.!!$R1 739
2 TraesCS3A01G067700 chr3A 40797627 40798366 739 True 1301.000000 1301 98.378000 2529 3268 1 chr3A.!!$R5 739
3 TraesCS3A01G067700 chr3A 40742369 40743108 739 True 1295.000000 1295 98.243000 2529 3268 1 chr3A.!!$R3 739
4 TraesCS3A01G067700 chr3A 40731093 40731832 739 True 1290.000000 1290 98.108000 2529 3268 1 chr3A.!!$R2 739
5 TraesCS3A01G067700 chr3A 40753642 40754377 735 True 1269.000000 1269 97.703000 2529 3268 1 chr3A.!!$R4 739
6 TraesCS3A01G067700 chr3D 486734362 486734965 603 True 745.000000 745 89.362000 3680 4272 1 chr3D.!!$R2 592
7 TraesCS3A01G067700 chr3D 18866416 18867001 585 False 627.000000 627 86.074000 3682 4272 1 chr3D.!!$F1 590
8 TraesCS3A01G067700 chr3D 29879791 29882603 2812 True 469.166667 1561 89.029667 109 3681 6 chr3D.!!$R3 3572
9 TraesCS3A01G067700 chr3D 223094383 223094986 603 True 429.000000 429 80.323000 3680 4272 1 chr3D.!!$R1 592
10 TraesCS3A01G067700 chr3B 50790092 50793238 3146 True 744.750000 1273 87.501250 55 3468 4 chr3B.!!$R3 3413
11 TraesCS3A01G067700 chr7A 3434854 3435465 611 True 793.000000 793 90.523000 3678 4272 1 chr7A.!!$R1 594
12 TraesCS3A01G067700 chr6A 596333987 596334592 605 True 773.000000 773 90.148000 3682 4272 1 chr6A.!!$R1 590
13 TraesCS3A01G067700 chr2D 384243109 384243716 607 False 758.000000 758 89.655000 3682 4272 1 chr2D.!!$F1 590
14 TraesCS3A01G067700 chr2A 286478781 286479385 604 True 697.000000 697 87.769000 3680 4272 1 chr2A.!!$R1 592
15 TraesCS3A01G067700 chr4A 125470968 125471584 616 False 691.000000 691 87.561000 3679 4272 1 chr4A.!!$F1 593
16 TraesCS3A01G067700 chr7D 277546189 277546786 597 False 656.000000 656 86.992000 3680 4272 1 chr7D.!!$F1 592
17 TraesCS3A01G067700 chr7D 528371920 528372518 598 False 636.000000 636 86.139000 3680 4272 1 chr7D.!!$F2 592
18 TraesCS3A01G067700 chr7D 187341906 187342517 611 False 390.000000 630 90.168000 1580 2214 2 chr7D.!!$F3 634
19 TraesCS3A01G067700 chr1D 348996059 348996647 588 False 654.000000 654 86.811000 3679 4272 1 chr1D.!!$F1 593
20 TraesCS3A01G067700 chr1D 190484626 190485235 609 True 643.000000 643 86.386000 3682 4271 1 chr1D.!!$R1 589
21 TraesCS3A01G067700 chr5A 650034464 650035060 596 False 621.000000 621 85.832000 3682 4272 1 chr5A.!!$F2 590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
777 787 0.038892 CATTGCCAAAGCGAGCAGTT 60.039 50.0 0.0 0.0 44.31 3.16 F
1027 1084 0.029567 GACGATCCGACTGGCTACTG 59.970 60.0 0.0 0.0 34.14 2.74 F
1031 1088 0.106167 ATCCGACTGGCTACTGGCTA 60.106 55.0 0.0 0.0 41.46 3.93 F
1967 2103 0.321996 GTTCTCAGGGTGTGGAGACC 59.678 60.0 0.0 0.0 39.73 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1939 2064 0.908910 ACCCTGAGAACACACACACA 59.091 50.0 0.00 0.0 0.0 3.72 R
2087 2227 0.979665 CAAGCTGTCTCCTTCCCTCA 59.020 55.0 0.00 0.0 0.0 3.86 R
2088 2228 0.980423 ACAAGCTGTCTCCTTCCCTC 59.020 55.0 0.00 0.0 0.0 4.30 R
3579 3973 0.446222 AAATGACGTCCGCAATTCCG 59.554 50.0 14.12 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.624352 TCTGGAAGAGTGAAGATGTTTTTG 57.376 37.500 0.00 0.00 38.67 2.44
36 37 6.356556 TCTGGAAGAGTGAAGATGTTTTTGA 58.643 36.000 0.00 0.00 38.67 2.69
37 38 7.000472 TCTGGAAGAGTGAAGATGTTTTTGAT 59.000 34.615 0.00 0.00 38.67 2.57
38 39 8.156820 TCTGGAAGAGTGAAGATGTTTTTGATA 58.843 33.333 0.00 0.00 38.67 2.15
39 40 8.327941 TGGAAGAGTGAAGATGTTTTTGATAG 57.672 34.615 0.00 0.00 0.00 2.08
40 41 7.094634 TGGAAGAGTGAAGATGTTTTTGATAGC 60.095 37.037 0.00 0.00 0.00 2.97
41 42 6.749923 AGAGTGAAGATGTTTTTGATAGCC 57.250 37.500 0.00 0.00 0.00 3.93
42 43 6.479884 AGAGTGAAGATGTTTTTGATAGCCT 58.520 36.000 0.00 0.00 0.00 4.58
43 44 6.597280 AGAGTGAAGATGTTTTTGATAGCCTC 59.403 38.462 0.00 0.00 0.00 4.70
44 45 6.479884 AGTGAAGATGTTTTTGATAGCCTCT 58.520 36.000 0.00 0.00 0.00 3.69
45 46 6.597280 AGTGAAGATGTTTTTGATAGCCTCTC 59.403 38.462 0.00 0.00 0.00 3.20
46 47 6.597280 GTGAAGATGTTTTTGATAGCCTCTCT 59.403 38.462 0.00 0.00 0.00 3.10
47 48 6.596888 TGAAGATGTTTTTGATAGCCTCTCTG 59.403 38.462 0.00 0.00 0.00 3.35
48 49 6.305272 AGATGTTTTTGATAGCCTCTCTGA 57.695 37.500 0.00 0.00 0.00 3.27
49 50 6.897986 AGATGTTTTTGATAGCCTCTCTGAT 58.102 36.000 0.00 0.00 0.00 2.90
50 51 8.027524 AGATGTTTTTGATAGCCTCTCTGATA 57.972 34.615 0.00 0.00 0.00 2.15
51 52 8.658619 AGATGTTTTTGATAGCCTCTCTGATAT 58.341 33.333 0.00 0.00 0.00 1.63
52 53 8.618702 ATGTTTTTGATAGCCTCTCTGATATG 57.381 34.615 0.00 0.00 0.00 1.78
53 54 7.795047 TGTTTTTGATAGCCTCTCTGATATGA 58.205 34.615 0.00 0.00 0.00 2.15
63 64 6.606796 AGCCTCTCTGATATGATATGTGGTAG 59.393 42.308 0.00 0.00 0.00 3.18
79 80 1.812571 GGTAGAACCTTGTGCCACATG 59.187 52.381 0.00 0.17 34.73 3.21
103 104 5.824097 GTGGTAGGGTAGAGAGAGAGTTTAG 59.176 48.000 0.00 0.00 0.00 1.85
104 105 5.491800 TGGTAGGGTAGAGAGAGAGTTTAGT 59.508 44.000 0.00 0.00 0.00 2.24
107 108 4.540906 AGGGTAGAGAGAGAGTTTAGTCCA 59.459 45.833 0.00 0.00 0.00 4.02
156 157 0.803768 CCTCGGAGTCAAGTCATGCG 60.804 60.000 4.02 0.00 0.00 4.73
174 180 1.668419 CGATGCCAGGTCCCTAAAAG 58.332 55.000 0.00 0.00 0.00 2.27
182 188 4.262036 GCCAGGTCCCTAAAAGAAAACAAG 60.262 45.833 0.00 0.00 0.00 3.16
185 191 6.097696 CCAGGTCCCTAAAAGAAAACAAGAAA 59.902 38.462 0.00 0.00 0.00 2.52
188 194 6.423905 GGTCCCTAAAAGAAAACAAGAAATGC 59.576 38.462 0.00 0.00 0.00 3.56
189 195 7.210174 GTCCCTAAAAGAAAACAAGAAATGCT 58.790 34.615 0.00 0.00 0.00 3.79
190 196 7.710907 GTCCCTAAAAGAAAACAAGAAATGCTT 59.289 33.333 0.00 0.00 37.29 3.91
212 218 3.114616 CGGCAGGCAGACGTCTTG 61.115 66.667 17.26 13.43 46.08 3.02
231 237 6.238184 CGTCTTGCAATAAATCTAGTCATGCA 60.238 38.462 0.00 0.00 40.22 3.96
232 238 7.130917 GTCTTGCAATAAATCTAGTCATGCAG 58.869 38.462 0.00 0.00 42.49 4.41
233 239 5.428496 TGCAATAAATCTAGTCATGCAGC 57.572 39.130 0.00 0.00 37.40 5.25
234 240 4.883006 TGCAATAAATCTAGTCATGCAGCA 59.117 37.500 0.00 0.00 37.40 4.41
235 241 5.008316 TGCAATAAATCTAGTCATGCAGCAG 59.992 40.000 0.00 0.00 37.40 4.24
236 242 5.450171 CAATAAATCTAGTCATGCAGCAGC 58.550 41.667 0.00 0.00 42.57 5.25
237 243 3.278668 AAATCTAGTCATGCAGCAGCT 57.721 42.857 0.00 1.62 42.74 4.24
238 244 3.278668 AATCTAGTCATGCAGCAGCTT 57.721 42.857 0.00 0.00 42.74 3.74
239 245 4.412796 AATCTAGTCATGCAGCAGCTTA 57.587 40.909 0.00 0.00 42.74 3.09
240 246 3.449528 TCTAGTCATGCAGCAGCTTAG 57.550 47.619 0.00 0.73 42.74 2.18
241 247 2.762887 TCTAGTCATGCAGCAGCTTAGT 59.237 45.455 0.00 0.00 42.74 2.24
242 248 2.021355 AGTCATGCAGCAGCTTAGTC 57.979 50.000 0.00 0.00 42.74 2.59
243 249 1.012841 GTCATGCAGCAGCTTAGTCC 58.987 55.000 0.00 0.00 42.74 3.85
244 250 0.614812 TCATGCAGCAGCTTAGTCCA 59.385 50.000 0.00 0.00 42.74 4.02
245 251 1.015109 CATGCAGCAGCTTAGTCCAG 58.985 55.000 0.00 0.00 42.74 3.86
246 252 0.617413 ATGCAGCAGCTTAGTCCAGT 59.383 50.000 0.00 0.00 42.74 4.00
247 253 0.397941 TGCAGCAGCTTAGTCCAGTT 59.602 50.000 1.76 0.00 42.74 3.16
248 254 0.801251 GCAGCAGCTTAGTCCAGTTG 59.199 55.000 0.00 0.00 37.91 3.16
249 255 1.879796 GCAGCAGCTTAGTCCAGTTGT 60.880 52.381 0.00 0.00 37.91 3.32
250 256 1.802960 CAGCAGCTTAGTCCAGTTGTG 59.197 52.381 0.00 0.00 0.00 3.33
251 257 1.694150 AGCAGCTTAGTCCAGTTGTGA 59.306 47.619 0.00 0.00 0.00 3.58
252 258 2.104792 AGCAGCTTAGTCCAGTTGTGAA 59.895 45.455 0.00 0.00 0.00 3.18
253 259 2.224314 GCAGCTTAGTCCAGTTGTGAAC 59.776 50.000 0.00 0.00 0.00 3.18
254 260 2.808543 CAGCTTAGTCCAGTTGTGAACC 59.191 50.000 0.00 0.00 0.00 3.62
255 261 2.438021 AGCTTAGTCCAGTTGTGAACCA 59.562 45.455 0.00 0.00 0.00 3.67
256 262 3.118038 AGCTTAGTCCAGTTGTGAACCAA 60.118 43.478 0.00 0.00 0.00 3.67
280 286 5.613358 CAGTGTTGGATGGTTAAAGAGAC 57.387 43.478 0.00 0.00 0.00 3.36
281 287 5.308825 CAGTGTTGGATGGTTAAAGAGACT 58.691 41.667 0.00 0.00 0.00 3.24
282 288 5.180117 CAGTGTTGGATGGTTAAAGAGACTG 59.820 44.000 0.00 0.00 0.00 3.51
283 289 5.063880 GTGTTGGATGGTTAAAGAGACTGT 58.936 41.667 0.00 0.00 0.00 3.55
284 290 5.049405 GTGTTGGATGGTTAAAGAGACTGTG 60.049 44.000 0.00 0.00 0.00 3.66
285 291 5.163248 TGTTGGATGGTTAAAGAGACTGTGA 60.163 40.000 0.00 0.00 0.00 3.58
286 292 5.762179 TGGATGGTTAAAGAGACTGTGAT 57.238 39.130 0.00 0.00 0.00 3.06
287 293 6.867519 TGGATGGTTAAAGAGACTGTGATA 57.132 37.500 0.00 0.00 0.00 2.15
288 294 7.437713 TGGATGGTTAAAGAGACTGTGATAT 57.562 36.000 0.00 0.00 0.00 1.63
289 295 7.500992 TGGATGGTTAAAGAGACTGTGATATC 58.499 38.462 0.00 0.00 0.00 1.63
290 296 6.931840 GGATGGTTAAAGAGACTGTGATATCC 59.068 42.308 0.00 0.00 0.00 2.59
291 297 7.202047 GGATGGTTAAAGAGACTGTGATATCCT 60.202 40.741 0.00 0.00 0.00 3.24
292 298 7.113658 TGGTTAAAGAGACTGTGATATCCTC 57.886 40.000 0.00 0.00 0.00 3.71
293 299 6.667848 TGGTTAAAGAGACTGTGATATCCTCA 59.332 38.462 0.00 0.00 0.00 3.86
294 300 7.180229 TGGTTAAAGAGACTGTGATATCCTCAA 59.820 37.037 0.00 0.00 35.07 3.02
295 301 7.492994 GGTTAAAGAGACTGTGATATCCTCAAC 59.507 40.741 0.00 0.95 35.07 3.18
296 302 5.606348 AAGAGACTGTGATATCCTCAACC 57.394 43.478 0.00 0.00 35.07 3.77
297 303 3.964031 AGAGACTGTGATATCCTCAACCC 59.036 47.826 0.00 0.00 35.07 4.11
298 304 3.041946 AGACTGTGATATCCTCAACCCC 58.958 50.000 0.00 0.00 35.07 4.95
299 305 3.041946 GACTGTGATATCCTCAACCCCT 58.958 50.000 0.00 0.00 35.07 4.79
300 306 3.041946 ACTGTGATATCCTCAACCCCTC 58.958 50.000 0.00 0.00 35.07 4.30
301 307 3.041211 CTGTGATATCCTCAACCCCTCA 58.959 50.000 0.00 0.00 35.07 3.86
302 308 3.041211 TGTGATATCCTCAACCCCTCAG 58.959 50.000 0.00 0.00 35.07 3.35
303 309 2.370189 GTGATATCCTCAACCCCTCAGG 59.630 54.545 0.00 0.00 43.78 3.86
318 324 3.249687 CAGGGTTAAGTCCTGGTGC 57.750 57.895 14.12 0.00 45.95 5.01
319 325 0.693049 CAGGGTTAAGTCCTGGTGCT 59.307 55.000 14.12 0.00 45.95 4.40
320 326 1.073923 CAGGGTTAAGTCCTGGTGCTT 59.926 52.381 14.12 10.13 45.95 3.91
321 327 1.073923 AGGGTTAAGTCCTGGTGCTTG 59.926 52.381 13.58 0.00 32.53 4.01
322 328 0.881796 GGTTAAGTCCTGGTGCTTGC 59.118 55.000 13.58 8.19 0.00 4.01
323 329 1.604604 GTTAAGTCCTGGTGCTTGCA 58.395 50.000 13.58 0.00 0.00 4.08
324 330 2.162681 GTTAAGTCCTGGTGCTTGCAT 58.837 47.619 13.58 0.00 0.00 3.96
325 331 2.558359 GTTAAGTCCTGGTGCTTGCATT 59.442 45.455 13.58 0.00 0.00 3.56
326 332 2.584835 AAGTCCTGGTGCTTGCATTA 57.415 45.000 0.00 0.00 0.00 1.90
327 333 2.814805 AGTCCTGGTGCTTGCATTAT 57.185 45.000 0.00 0.00 0.00 1.28
328 334 3.091633 AGTCCTGGTGCTTGCATTATT 57.908 42.857 0.00 0.00 0.00 1.40
329 335 4.235079 AGTCCTGGTGCTTGCATTATTA 57.765 40.909 0.00 0.00 0.00 0.98
330 336 4.202441 AGTCCTGGTGCTTGCATTATTAG 58.798 43.478 0.00 0.00 0.00 1.73
331 337 3.316308 GTCCTGGTGCTTGCATTATTAGG 59.684 47.826 0.00 3.47 0.00 2.69
332 338 2.035066 CCTGGTGCTTGCATTATTAGGC 59.965 50.000 0.00 0.00 0.00 3.93
333 339 2.031120 TGGTGCTTGCATTATTAGGCC 58.969 47.619 0.00 0.00 0.00 5.19
334 340 2.310538 GGTGCTTGCATTATTAGGCCT 58.689 47.619 11.78 11.78 0.00 5.19
335 341 2.695147 GGTGCTTGCATTATTAGGCCTT 59.305 45.455 12.58 0.00 0.00 4.35
336 342 3.491447 GGTGCTTGCATTATTAGGCCTTG 60.491 47.826 12.58 3.10 0.00 3.61
337 343 3.131046 GTGCTTGCATTATTAGGCCTTGT 59.869 43.478 12.58 1.94 0.00 3.16
338 344 4.338118 GTGCTTGCATTATTAGGCCTTGTA 59.662 41.667 12.58 0.00 0.00 2.41
339 345 4.338118 TGCTTGCATTATTAGGCCTTGTAC 59.662 41.667 12.58 0.00 0.00 2.90
340 346 4.338118 GCTTGCATTATTAGGCCTTGTACA 59.662 41.667 12.58 0.00 0.00 2.90
341 347 5.163561 GCTTGCATTATTAGGCCTTGTACAA 60.164 40.000 12.58 8.28 0.00 2.41
342 348 6.461509 GCTTGCATTATTAGGCCTTGTACAAT 60.462 38.462 12.58 6.77 0.00 2.71
343 349 6.389830 TGCATTATTAGGCCTTGTACAATG 57.610 37.500 12.58 14.63 0.00 2.82
344 350 5.301551 TGCATTATTAGGCCTTGTACAATGG 59.698 40.000 12.58 13.26 0.00 3.16
345 351 5.278957 GCATTATTAGGCCTTGTACAATGGG 60.279 44.000 12.58 14.91 0.00 4.00
346 352 5.718801 TTATTAGGCCTTGTACAATGGGA 57.281 39.130 12.58 0.00 0.00 4.37
347 353 3.644966 TTAGGCCTTGTACAATGGGAG 57.355 47.619 12.58 1.65 0.00 4.30
348 354 0.625849 AGGCCTTGTACAATGGGAGG 59.374 55.000 16.08 11.34 0.00 4.30
349 355 0.331616 GGCCTTGTACAATGGGAGGT 59.668 55.000 16.08 0.00 0.00 3.85
350 356 1.463674 GCCTTGTACAATGGGAGGTG 58.536 55.000 16.08 0.00 0.00 4.00
351 357 1.463674 CCTTGTACAATGGGAGGTGC 58.536 55.000 9.13 0.00 0.00 5.01
352 358 1.004745 CCTTGTACAATGGGAGGTGCT 59.995 52.381 9.13 0.00 0.00 4.40
353 359 2.555227 CCTTGTACAATGGGAGGTGCTT 60.555 50.000 9.13 0.00 0.00 3.91
354 360 3.308117 CCTTGTACAATGGGAGGTGCTTA 60.308 47.826 9.13 0.00 0.00 3.09
355 361 3.627395 TGTACAATGGGAGGTGCTTAG 57.373 47.619 0.00 0.00 0.00 2.18
356 362 2.238646 TGTACAATGGGAGGTGCTTAGG 59.761 50.000 0.00 0.00 0.00 2.69
357 363 0.625849 ACAATGGGAGGTGCTTAGGG 59.374 55.000 0.00 0.00 0.00 3.53
358 364 0.106519 CAATGGGAGGTGCTTAGGGG 60.107 60.000 0.00 0.00 0.00 4.79
359 365 0.253630 AATGGGAGGTGCTTAGGGGA 60.254 55.000 0.00 0.00 0.00 4.81
360 366 0.695803 ATGGGAGGTGCTTAGGGGAG 60.696 60.000 0.00 0.00 0.00 4.30
361 367 2.073101 GGGAGGTGCTTAGGGGAGG 61.073 68.421 0.00 0.00 0.00 4.30
362 368 1.307084 GGAGGTGCTTAGGGGAGGT 60.307 63.158 0.00 0.00 0.00 3.85
363 369 1.627297 GGAGGTGCTTAGGGGAGGTG 61.627 65.000 0.00 0.00 0.00 4.00
364 370 2.258748 GAGGTGCTTAGGGGAGGTGC 62.259 65.000 0.00 0.00 0.00 5.01
365 371 2.301738 GGTGCTTAGGGGAGGTGCT 61.302 63.158 0.00 0.00 0.00 4.40
366 372 1.685820 GTGCTTAGGGGAGGTGCTT 59.314 57.895 0.00 0.00 0.00 3.91
367 373 0.909623 GTGCTTAGGGGAGGTGCTTA 59.090 55.000 0.00 0.00 0.00 3.09
368 374 1.134371 GTGCTTAGGGGAGGTGCTTAG 60.134 57.143 0.00 0.00 0.00 2.18
369 375 1.273609 TGCTTAGGGGAGGTGCTTAGA 60.274 52.381 0.00 0.00 0.00 2.10
370 376 1.414550 GCTTAGGGGAGGTGCTTAGAG 59.585 57.143 0.00 0.00 0.00 2.43
371 377 2.955461 GCTTAGGGGAGGTGCTTAGAGA 60.955 54.545 0.00 0.00 0.00 3.10
372 378 3.375699 CTTAGGGGAGGTGCTTAGAGAA 58.624 50.000 0.00 0.00 0.00 2.87
373 379 2.344093 AGGGGAGGTGCTTAGAGAAA 57.656 50.000 0.00 0.00 0.00 2.52
374 380 2.852130 AGGGGAGGTGCTTAGAGAAAT 58.148 47.619 0.00 0.00 0.00 2.17
375 381 4.008916 AGGGGAGGTGCTTAGAGAAATA 57.991 45.455 0.00 0.00 0.00 1.40
376 382 4.371681 AGGGGAGGTGCTTAGAGAAATAA 58.628 43.478 0.00 0.00 0.00 1.40
377 383 4.788617 AGGGGAGGTGCTTAGAGAAATAAA 59.211 41.667 0.00 0.00 0.00 1.40
378 384 4.882427 GGGGAGGTGCTTAGAGAAATAAAC 59.118 45.833 0.00 0.00 0.00 2.01
379 385 4.882427 GGGAGGTGCTTAGAGAAATAAACC 59.118 45.833 0.00 0.00 0.00 3.27
380 386 5.497474 GGAGGTGCTTAGAGAAATAAACCA 58.503 41.667 0.00 0.00 0.00 3.67
381 387 5.586643 GGAGGTGCTTAGAGAAATAAACCAG 59.413 44.000 0.00 0.00 0.00 4.00
382 388 6.374417 AGGTGCTTAGAGAAATAAACCAGA 57.626 37.500 0.00 0.00 0.00 3.86
383 389 6.174049 AGGTGCTTAGAGAAATAAACCAGAC 58.826 40.000 0.00 0.00 0.00 3.51
384 390 6.013293 AGGTGCTTAGAGAAATAAACCAGACT 60.013 38.462 0.00 0.00 0.00 3.24
385 391 6.655425 GGTGCTTAGAGAAATAAACCAGACTT 59.345 38.462 0.00 0.00 0.00 3.01
386 392 7.175119 GGTGCTTAGAGAAATAAACCAGACTTT 59.825 37.037 0.00 0.00 0.00 2.66
387 393 8.568794 GTGCTTAGAGAAATAAACCAGACTTTT 58.431 33.333 0.00 0.00 0.00 2.27
388 394 8.784043 TGCTTAGAGAAATAAACCAGACTTTTC 58.216 33.333 0.00 0.00 0.00 2.29
389 395 9.004717 GCTTAGAGAAATAAACCAGACTTTTCT 57.995 33.333 0.00 0.00 38.86 2.52
394 400 9.613957 GAGAAATAAACCAGACTTTTCTTAAGC 57.386 33.333 0.00 0.00 36.91 3.09
395 401 9.131791 AGAAATAAACCAGACTTTTCTTAAGCA 57.868 29.630 0.00 0.00 33.97 3.91
396 402 9.181805 GAAATAAACCAGACTTTTCTTAAGCAC 57.818 33.333 0.00 0.00 0.00 4.40
397 403 5.515797 AAACCAGACTTTTCTTAAGCACC 57.484 39.130 0.00 0.00 0.00 5.01
398 404 3.139077 ACCAGACTTTTCTTAAGCACCG 58.861 45.455 0.00 0.00 0.00 4.94
399 405 2.484264 CCAGACTTTTCTTAAGCACCGG 59.516 50.000 0.00 0.00 0.00 5.28
400 406 3.139077 CAGACTTTTCTTAAGCACCGGT 58.861 45.455 0.00 0.00 0.00 5.28
401 407 3.058914 CAGACTTTTCTTAAGCACCGGTG 60.059 47.826 30.66 30.66 0.00 4.94
414 420 3.740044 CACCGGTGCTTATTTGTACAG 57.260 47.619 24.02 0.00 0.00 2.74
415 421 2.418628 CACCGGTGCTTATTTGTACAGG 59.581 50.000 24.02 0.00 41.71 4.00
416 422 2.303600 ACCGGTGCTTATTTGTACAGGA 59.696 45.455 6.12 0.00 39.37 3.86
417 423 3.054655 ACCGGTGCTTATTTGTACAGGAT 60.055 43.478 6.12 0.00 39.37 3.24
418 424 4.162698 ACCGGTGCTTATTTGTACAGGATA 59.837 41.667 6.12 0.00 39.37 2.59
419 425 4.750098 CCGGTGCTTATTTGTACAGGATAG 59.250 45.833 0.00 0.00 39.37 2.08
420 426 5.452776 CCGGTGCTTATTTGTACAGGATAGA 60.453 44.000 0.00 0.00 39.37 1.98
421 427 5.462398 CGGTGCTTATTTGTACAGGATAGAC 59.538 44.000 0.00 0.00 0.00 2.59
422 428 5.462398 GGTGCTTATTTGTACAGGATAGACG 59.538 44.000 0.00 0.00 0.00 4.18
423 429 5.047847 TGCTTATTTGTACAGGATAGACGC 58.952 41.667 0.00 4.64 0.00 5.19
424 430 5.163447 TGCTTATTTGTACAGGATAGACGCT 60.163 40.000 0.00 0.00 0.00 5.07
425 431 5.753921 GCTTATTTGTACAGGATAGACGCTT 59.246 40.000 0.00 0.00 0.00 4.68
426 432 6.921857 GCTTATTTGTACAGGATAGACGCTTA 59.078 38.462 0.00 0.00 0.00 3.09
427 433 7.437267 GCTTATTTGTACAGGATAGACGCTTAA 59.563 37.037 0.00 0.00 0.00 1.85
428 434 8.638685 TTATTTGTACAGGATAGACGCTTAAC 57.361 34.615 0.00 0.00 0.00 2.01
429 435 5.909621 TTGTACAGGATAGACGCTTAACT 57.090 39.130 0.00 0.00 0.00 2.24
430 436 7.395190 TTTGTACAGGATAGACGCTTAACTA 57.605 36.000 0.00 0.00 0.00 2.24
431 437 7.395190 TTGTACAGGATAGACGCTTAACTAA 57.605 36.000 0.00 0.00 0.00 2.24
432 438 7.024340 TGTACAGGATAGACGCTTAACTAAG 57.976 40.000 0.00 0.00 36.40 2.18
444 450 4.705337 CTTAACTAAGCGTCTCTCCTGT 57.295 45.455 0.00 0.00 0.00 4.00
445 451 5.814764 CTTAACTAAGCGTCTCTCCTGTA 57.185 43.478 0.00 0.00 0.00 2.74
446 452 5.812652 CTTAACTAAGCGTCTCTCCTGTAG 58.187 45.833 0.00 0.00 0.00 2.74
447 453 3.630892 ACTAAGCGTCTCTCCTGTAGA 57.369 47.619 0.00 0.00 0.00 2.59
448 454 3.952931 ACTAAGCGTCTCTCCTGTAGAA 58.047 45.455 0.00 0.00 32.46 2.10
449 455 4.333690 ACTAAGCGTCTCTCCTGTAGAAA 58.666 43.478 0.00 0.00 32.46 2.52
450 456 4.951094 ACTAAGCGTCTCTCCTGTAGAAAT 59.049 41.667 0.00 0.00 32.46 2.17
451 457 6.120905 ACTAAGCGTCTCTCCTGTAGAAATA 58.879 40.000 0.00 0.00 32.46 1.40
452 458 5.508200 AAGCGTCTCTCCTGTAGAAATAG 57.492 43.478 0.00 0.00 32.46 1.73
453 459 3.886505 AGCGTCTCTCCTGTAGAAATAGG 59.113 47.826 0.00 0.00 35.36 2.57
454 460 3.551250 GCGTCTCTCCTGTAGAAATAGGC 60.551 52.174 0.00 0.00 34.08 3.93
455 461 3.632604 CGTCTCTCCTGTAGAAATAGGCA 59.367 47.826 0.00 0.00 34.08 4.75
456 462 4.498345 CGTCTCTCCTGTAGAAATAGGCAC 60.498 50.000 0.00 0.00 34.08 5.01
457 463 3.961408 TCTCTCCTGTAGAAATAGGCACC 59.039 47.826 0.00 0.00 34.08 5.01
458 464 2.693591 TCTCCTGTAGAAATAGGCACCG 59.306 50.000 0.00 0.00 34.08 4.94
459 465 1.760613 TCCTGTAGAAATAGGCACCGG 59.239 52.381 0.00 0.00 34.08 5.28
460 466 1.485066 CCTGTAGAAATAGGCACCGGT 59.515 52.381 0.00 0.00 0.00 5.28
461 467 2.550978 CTGTAGAAATAGGCACCGGTG 58.449 52.381 30.66 30.66 0.00 4.94
498 504 8.803235 ACCTGGTTTATTTTTCTAAACATCTCC 58.197 33.333 0.00 0.00 41.36 3.71
499 505 8.251026 CCTGGTTTATTTTTCTAAACATCTCCC 58.749 37.037 8.47 0.00 41.36 4.30
500 506 8.950007 TGGTTTATTTTTCTAAACATCTCCCT 57.050 30.769 8.47 0.00 41.36 4.20
505 511 9.747898 TTATTTTTCTAAACATCTCCCTAAGCA 57.252 29.630 0.00 0.00 0.00 3.91
506 512 7.448748 TTTTTCTAAACATCTCCCTAAGCAC 57.551 36.000 0.00 0.00 0.00 4.40
507 513 4.755266 TCTAAACATCTCCCTAAGCACC 57.245 45.455 0.00 0.00 0.00 5.01
508 514 4.362677 TCTAAACATCTCCCTAAGCACCT 58.637 43.478 0.00 0.00 0.00 4.00
509 515 4.783227 TCTAAACATCTCCCTAAGCACCTT 59.217 41.667 0.00 0.00 0.00 3.50
510 516 3.636153 AACATCTCCCTAAGCACCTTC 57.364 47.619 0.00 0.00 0.00 3.46
511 517 1.840635 ACATCTCCCTAAGCACCTTCC 59.159 52.381 0.00 0.00 0.00 3.46
512 518 1.123928 ATCTCCCTAAGCACCTTCCG 58.876 55.000 0.00 0.00 0.00 4.30
513 519 0.976073 TCTCCCTAAGCACCTTCCGG 60.976 60.000 0.00 0.00 0.00 5.14
514 520 1.972660 CTCCCTAAGCACCTTCCGGG 61.973 65.000 0.00 6.12 36.36 5.73
515 521 1.993391 CCCTAAGCACCTTCCGGGA 60.993 63.158 0.00 0.00 36.83 5.14
516 522 1.522569 CCTAAGCACCTTCCGGGAG 59.477 63.158 1.30 1.30 38.76 4.30
517 523 0.976073 CCTAAGCACCTTCCGGGAGA 60.976 60.000 12.85 0.00 38.76 3.71
518 524 0.461961 CTAAGCACCTTCCGGGAGAG 59.538 60.000 12.85 4.33 38.76 3.20
519 525 0.976073 TAAGCACCTTCCGGGAGAGG 60.976 60.000 12.85 14.35 38.76 3.69
520 526 2.683933 GCACCTTCCGGGAGAGGA 60.684 66.667 23.53 0.00 38.79 3.71
521 527 2.726351 GCACCTTCCGGGAGAGGAG 61.726 68.421 23.53 18.68 41.98 3.69
522 528 1.000486 CACCTTCCGGGAGAGGAGA 60.000 63.158 23.53 0.00 41.98 3.71
523 529 1.000612 ACCTTCCGGGAGAGGAGAC 59.999 63.158 23.53 0.00 41.98 3.36
524 530 2.122167 CCTTCCGGGAGAGGAGACG 61.122 68.421 12.85 0.00 41.98 4.18
525 531 1.378778 CTTCCGGGAGAGGAGACGT 60.379 63.158 2.45 0.00 41.98 4.34
526 532 0.966370 CTTCCGGGAGAGGAGACGTT 60.966 60.000 2.45 0.00 41.98 3.99
527 533 0.964358 TTCCGGGAGAGGAGACGTTC 60.964 60.000 0.00 0.00 41.98 3.95
535 541 4.863984 GGAGACGTTCCTGTCGAC 57.136 61.111 9.11 9.11 43.70 4.20
536 542 1.954528 GGAGACGTTCCTGTCGACA 59.045 57.895 18.88 18.88 43.70 4.35
537 543 0.313043 GGAGACGTTCCTGTCGACAA 59.687 55.000 20.49 2.19 43.70 3.18
538 544 1.406447 GAGACGTTCCTGTCGACAAC 58.594 55.000 20.49 13.90 43.70 3.32
539 545 0.742505 AGACGTTCCTGTCGACAACA 59.257 50.000 20.49 5.82 43.70 3.33
540 546 0.850856 GACGTTCCTGTCGACAACAC 59.149 55.000 20.49 14.40 33.24 3.32
541 547 0.458669 ACGTTCCTGTCGACAACACT 59.541 50.000 20.49 0.26 33.24 3.55
542 548 0.852777 CGTTCCTGTCGACAACACTG 59.147 55.000 20.49 7.25 33.24 3.66
543 549 1.535226 CGTTCCTGTCGACAACACTGA 60.535 52.381 20.49 8.31 33.24 3.41
544 550 2.755650 GTTCCTGTCGACAACACTGAT 58.244 47.619 20.49 0.00 33.24 2.90
545 551 2.438868 TCCTGTCGACAACACTGATG 57.561 50.000 20.49 4.94 33.24 3.07
546 552 1.686587 TCCTGTCGACAACACTGATGT 59.313 47.619 20.49 0.00 42.46 3.06
589 595 7.014615 AGTCCAATTGCAACTTGTAGAAAGAAT 59.985 33.333 0.00 0.00 0.00 2.40
679 689 5.393027 CGGCTTAATCTAATTGCAGTTGGTT 60.393 40.000 4.47 2.25 0.00 3.67
688 698 4.688419 CAGTTGGTTGCGCTGGCG 62.688 66.667 9.73 10.80 44.10 5.69
704 714 4.221422 CGCCCGTCCGATCCATGT 62.221 66.667 0.00 0.00 0.00 3.21
753 763 0.676184 TGAGCACTGAGTCACTGACC 59.324 55.000 5.51 0.00 32.18 4.02
773 783 2.507769 GCCATTGCCAAAGCGAGC 60.508 61.111 0.00 0.00 44.31 5.03
774 784 2.964174 CCATTGCCAAAGCGAGCA 59.036 55.556 0.00 0.00 44.31 4.26
775 785 1.153901 CCATTGCCAAAGCGAGCAG 60.154 57.895 0.00 0.00 44.31 4.24
776 786 1.582968 CATTGCCAAAGCGAGCAGT 59.417 52.632 0.00 0.00 44.31 4.40
777 787 0.038892 CATTGCCAAAGCGAGCAGTT 60.039 50.000 0.00 0.00 44.31 3.16
778 788 0.038892 ATTGCCAAAGCGAGCAGTTG 60.039 50.000 0.00 1.45 44.31 3.16
779 789 2.429739 GCCAAAGCGAGCAGTTGC 60.430 61.111 0.00 0.00 42.49 4.17
780 790 2.256461 CCAAAGCGAGCAGTTGCC 59.744 61.111 0.00 0.00 43.38 4.52
781 791 2.554636 CCAAAGCGAGCAGTTGCCA 61.555 57.895 0.00 0.00 43.38 4.92
782 792 1.359833 CAAAGCGAGCAGTTGCCAA 59.640 52.632 0.00 0.00 43.38 4.52
783 793 0.038892 CAAAGCGAGCAGTTGCCAAT 60.039 50.000 0.00 0.00 43.38 3.16
784 794 0.242017 AAAGCGAGCAGTTGCCAATC 59.758 50.000 0.00 0.00 43.38 2.67
785 795 0.607489 AAGCGAGCAGTTGCCAATCT 60.607 50.000 0.00 0.00 43.38 2.40
796 806 4.098960 CAGTTGCCAATCTAATCTGCCATT 59.901 41.667 0.00 0.00 0.00 3.16
910 938 0.745486 TGACGTACCTGCGCTAGCTA 60.745 55.000 13.93 0.43 45.42 3.32
911 939 0.316854 GACGTACCTGCGCTAGCTAC 60.317 60.000 13.93 7.06 45.42 3.58
933 987 5.933734 CGGCATACTATATGACGTTCATC 57.066 43.478 14.57 0.00 44.85 2.92
937 991 5.862323 GCATACTATATGACGTTCATCCGTT 59.138 40.000 4.15 0.00 41.98 4.44
947 1001 1.002900 GTTCATCCGTTGGTGTGTGTG 60.003 52.381 0.00 0.00 0.00 3.82
949 1003 0.307453 CATCCGTTGGTGTGTGTGTG 59.693 55.000 0.00 0.00 0.00 3.82
1016 1073 0.174845 TTAGTTGGCTGGACGATCCG 59.825 55.000 0.00 0.00 40.17 4.18
1023 1080 2.362503 TGGACGATCCGACTGGCT 60.363 61.111 0.00 0.00 40.17 4.75
1024 1081 1.077285 TGGACGATCCGACTGGCTA 60.077 57.895 0.00 0.00 40.17 3.93
1025 1082 1.359475 GGACGATCCGACTGGCTAC 59.641 63.158 0.00 0.00 34.14 3.58
1027 1084 0.029567 GACGATCCGACTGGCTACTG 59.970 60.000 0.00 0.00 34.14 2.74
1029 1086 1.068250 GATCCGACTGGCTACTGGC 59.932 63.158 0.00 0.00 40.90 4.85
1030 1087 1.381872 ATCCGACTGGCTACTGGCT 60.382 57.895 0.00 0.00 41.46 4.75
1031 1088 0.106167 ATCCGACTGGCTACTGGCTA 60.106 55.000 0.00 0.00 41.46 3.93
1032 1089 1.035932 TCCGACTGGCTACTGGCTAC 61.036 60.000 0.00 0.00 41.46 3.58
1055 1112 4.881057 GCAGCAGCTGATCCTGAT 57.119 55.556 27.39 0.00 37.91 2.90
1056 1113 2.619362 GCAGCAGCTGATCCTGATC 58.381 57.895 27.39 1.31 37.91 2.92
1057 1114 1.222766 GCAGCAGCTGATCCTGATCG 61.223 60.000 27.39 0.00 40.63 3.69
1058 1115 0.388294 CAGCAGCTGATCCTGATCGA 59.612 55.000 20.43 0.00 40.63 3.59
1059 1116 0.675083 AGCAGCTGATCCTGATCGAG 59.325 55.000 20.43 3.33 40.63 4.04
1060 1117 0.672889 GCAGCTGATCCTGATCGAGA 59.327 55.000 20.43 0.00 40.63 4.04
1061 1118 1.336148 GCAGCTGATCCTGATCGAGAG 60.336 57.143 20.43 0.00 40.63 3.20
1259 1337 5.760743 CCGTCTCCTTTCTTTCTTTCTTTCT 59.239 40.000 0.00 0.00 0.00 2.52
1261 1339 7.201741 CCGTCTCCTTTCTTTCTTTCTTTCTTT 60.202 37.037 0.00 0.00 0.00 2.52
1262 1340 7.853437 CGTCTCCTTTCTTTCTTTCTTTCTTTC 59.147 37.037 0.00 0.00 0.00 2.62
1264 1342 9.467796 TCTCCTTTCTTTCTTTCTTTCTTTCTT 57.532 29.630 0.00 0.00 0.00 2.52
1316 1430 1.153842 CACGCATACGCAGGTGAGA 60.154 57.895 0.00 0.00 45.53 3.27
1466 1580 1.153628 CGTCGTCAACCCCATCTCC 60.154 63.158 0.00 0.00 0.00 3.71
1496 1610 3.474806 GTCATGGACAAGACGCCG 58.525 61.111 0.00 0.00 32.09 6.46
1517 1631 1.134367 CACATCTACCTCGCCTTCGAA 59.866 52.381 0.00 0.00 44.98 3.71
1520 1634 1.035932 TCTACCTCGCCTTCGAAGGG 61.036 60.000 38.28 28.87 46.56 3.95
1687 1804 9.559958 CATCTAAATTATCTTGTGTGTGGTTTC 57.440 33.333 0.00 0.00 0.00 2.78
1708 1827 9.032420 GGTTTCCACTTTTAGTTAGATATCGAG 57.968 37.037 0.00 0.00 0.00 4.04
1721 1840 5.282055 AGATATCGAGGAAATGCACTGAA 57.718 39.130 0.00 0.00 0.00 3.02
1838 1961 5.281727 GGATAAATTCCAGCGAATGTTTCC 58.718 41.667 0.00 0.52 44.74 3.13
1846 1969 0.806241 GCGAATGTTTCCGCCCTTTA 59.194 50.000 0.00 0.00 45.06 1.85
1872 1996 4.727179 CGAAATGCAAATCGAATGACTGAG 59.273 41.667 16.82 0.00 41.43 3.35
1879 2003 5.907945 GCAAATCGAATGACTGAGATTCATG 59.092 40.000 5.82 0.00 33.84 3.07
1888 2012 4.877823 TGACTGAGATTCATGGAATTTCGG 59.122 41.667 13.66 13.66 41.96 4.30
1892 2016 4.635765 TGAGATTCATGGAATTTCGGTGAC 59.364 41.667 0.00 0.00 36.39 3.67
1895 2019 5.355350 AGATTCATGGAATTTCGGTGACTTC 59.645 40.000 0.00 4.07 31.89 3.01
1896 2020 3.000041 TCATGGAATTTCGGTGACTTCG 59.000 45.455 0.00 0.00 0.00 3.79
1897 2021 2.823924 TGGAATTTCGGTGACTTCGA 57.176 45.000 0.00 0.00 34.62 3.71
1901 2025 3.181510 GGAATTTCGGTGACTTCGATTGG 60.182 47.826 0.00 0.00 36.49 3.16
1903 2027 2.536761 TTCGGTGACTTCGATTGGTT 57.463 45.000 0.00 0.00 36.49 3.67
1911 2035 3.435327 TGACTTCGATTGGTTCCGAAATG 59.565 43.478 0.00 0.00 43.05 2.32
1914 2038 4.998672 ACTTCGATTGGTTCCGAAATGTTA 59.001 37.500 0.00 0.00 43.05 2.41
1928 2052 5.625311 CCGAAATGTTACTGAAACTGAAAGC 59.375 40.000 0.00 0.00 38.99 3.51
1931 2055 4.789095 TGTTACTGAAACTGAAAGCGAC 57.211 40.909 0.00 0.00 38.99 5.19
1937 2062 2.948979 TGAAACTGAAAGCGACAACCAT 59.051 40.909 0.00 0.00 37.60 3.55
1938 2063 3.003275 TGAAACTGAAAGCGACAACCATC 59.997 43.478 0.00 0.00 37.60 3.51
1939 2064 2.550830 ACTGAAAGCGACAACCATCT 57.449 45.000 0.00 0.00 37.60 2.90
1940 2065 2.146342 ACTGAAAGCGACAACCATCTG 58.854 47.619 0.00 0.00 37.60 2.90
1967 2103 0.321996 GTTCTCAGGGTGTGGAGACC 59.678 60.000 0.00 0.00 39.73 3.85
2014 2150 3.683802 AGGAAAACATTGAGAGGCTCAG 58.316 45.455 18.26 3.47 41.75 3.35
2047 2183 1.315257 GCCAACAGGGTGCAGGTATG 61.315 60.000 0.00 0.00 39.65 2.39
2065 2205 7.520776 GCAGGTATGTATACTACTGTCTGTCAG 60.521 44.444 4.17 0.29 40.13 3.51
2077 2217 2.826428 GTCTGTCAGACAGCTTGTTCA 58.174 47.619 25.11 3.84 45.54 3.18
2078 2218 3.397482 GTCTGTCAGACAGCTTGTTCAT 58.603 45.455 25.11 0.00 45.54 2.57
2079 2219 3.812053 GTCTGTCAGACAGCTTGTTCATT 59.188 43.478 25.11 0.00 45.54 2.57
2080 2220 4.274459 GTCTGTCAGACAGCTTGTTCATTT 59.726 41.667 25.11 0.00 45.54 2.32
2081 2221 4.883585 TCTGTCAGACAGCTTGTTCATTTT 59.116 37.500 23.94 0.00 45.54 1.82
2082 2222 5.357878 TCTGTCAGACAGCTTGTTCATTTTT 59.642 36.000 23.94 0.00 45.54 1.94
2152 2292 3.373748 CCCACTTGAAACAAACAAAAGGC 59.626 43.478 0.00 0.00 0.00 4.35
2213 2365 1.518056 CTTTGCACGTGACCTGGCAT 61.518 55.000 22.23 0.00 35.98 4.40
2305 2462 2.239402 TGTAGATTCAGAATGCCCTGCA 59.761 45.455 0.00 0.00 44.86 4.41
2319 2476 2.548920 GCCCTGCATACTCTGTCATACC 60.549 54.545 0.00 0.00 0.00 2.73
2333 2491 6.482524 TCTGTCATACCACTACTACTCTGTT 58.517 40.000 0.00 0.00 0.00 3.16
2334 2492 6.598457 TCTGTCATACCACTACTACTCTGTTC 59.402 42.308 0.00 0.00 0.00 3.18
2336 2494 6.946583 TGTCATACCACTACTACTCTGTTCTT 59.053 38.462 0.00 0.00 0.00 2.52
2337 2495 7.450634 TGTCATACCACTACTACTCTGTTCTTT 59.549 37.037 0.00 0.00 0.00 2.52
2338 2496 7.969508 GTCATACCACTACTACTCTGTTCTTTC 59.030 40.741 0.00 0.00 0.00 2.62
2340 2498 6.334102 ACCACTACTACTCTGTTCTTTCTG 57.666 41.667 0.00 0.00 0.00 3.02
2342 2500 7.002879 ACCACTACTACTCTGTTCTTTCTGTA 58.997 38.462 0.00 0.00 0.00 2.74
2343 2501 7.504911 ACCACTACTACTCTGTTCTTTCTGTAA 59.495 37.037 0.00 0.00 0.00 2.41
2396 2554 6.907741 TGCTGAACATTAATTCATCACGAAA 58.092 32.000 0.00 0.00 37.93 3.46
2401 2559 7.967854 TGAACATTAATTCATCACGAAATGGAC 59.032 33.333 0.00 0.00 37.12 4.02
2442 2634 4.941657 TGTTGCATTGCTACATTTCACAA 58.058 34.783 19.62 0.00 39.07 3.33
2445 2637 6.482641 TGTTGCATTGCTACATTTCACAATTT 59.517 30.769 19.62 0.00 39.07 1.82
2447 2639 7.119605 TGCATTGCTACATTTCACAATTTTC 57.880 32.000 10.49 0.00 30.54 2.29
2450 2642 8.284693 GCATTGCTACATTTCACAATTTTCTTT 58.715 29.630 0.16 0.00 30.54 2.52
2494 2861 8.226819 TCAAAATTATCAGGTGTGTGTTTGTA 57.773 30.769 0.00 0.00 0.00 2.41
2502 2869 2.450160 GTGTGTGTTTGTACAGCAAGC 58.550 47.619 0.00 0.00 38.47 4.01
2509 2876 5.298026 TGTGTTTGTACAGCAAGCTCATTAA 59.702 36.000 0.00 0.00 37.05 1.40
2531 2898 8.758633 TTAATTAACTAGTTCAGTCAGTCAGC 57.241 34.615 12.39 0.00 36.04 4.26
2551 2918 2.819608 GCTGTTGATTCTTGCAACCCTA 59.180 45.455 0.00 0.00 43.71 3.53
2618 2986 1.675310 CCAATCTGCGCTCCCAACA 60.675 57.895 9.73 0.00 0.00 3.33
2815 3186 1.442526 GCAAGGGCGAGGACATCATG 61.443 60.000 0.00 0.00 0.00 3.07
3261 3654 3.862991 GAACCGGAGCTAGGCCCC 61.863 72.222 9.46 0.00 0.00 5.80
3277 3670 4.687976 AGGCCCCATTCTTCTACAAAAAT 58.312 39.130 0.00 0.00 0.00 1.82
3296 3689 9.558396 ACAAAAATATGAAATTCAGCCAAAGAA 57.442 25.926 1.10 0.00 0.00 2.52
3356 3750 1.750206 GAAGACGGACTTACTCCCTCC 59.250 57.143 0.00 0.00 39.13 4.30
3388 3782 3.297134 AGTGTTGTGGTCTTGGTTCAT 57.703 42.857 0.00 0.00 0.00 2.57
3411 3805 8.832521 TCATATTTGAACTAAAACGACAACACT 58.167 29.630 0.00 0.00 0.00 3.55
3418 3812 5.663456 ACTAAAACGACAACACTAGGAACA 58.337 37.500 0.00 0.00 0.00 3.18
3431 3825 7.604657 ACACTAGGAACAGAGGGAATATAAG 57.395 40.000 0.00 0.00 0.00 1.73
3452 3846 1.415672 AAAGAGCCTCCACCCGACAA 61.416 55.000 0.00 0.00 0.00 3.18
3460 3854 0.034380 TCCACCCGACAAACAAACCA 60.034 50.000 0.00 0.00 0.00 3.67
3468 3862 4.813697 CCCGACAAACAAACCATCAAATTT 59.186 37.500 0.00 0.00 0.00 1.82
3469 3863 5.986135 CCCGACAAACAAACCATCAAATTTA 59.014 36.000 0.00 0.00 0.00 1.40
3470 3864 6.145371 CCCGACAAACAAACCATCAAATTTAG 59.855 38.462 0.00 0.00 0.00 1.85
3471 3865 6.145371 CCGACAAACAAACCATCAAATTTAGG 59.855 38.462 0.00 0.00 0.00 2.69
3472 3866 6.145371 CGACAAACAAACCATCAAATTTAGGG 59.855 38.462 7.99 4.90 0.00 3.53
3473 3867 7.130681 ACAAACAAACCATCAAATTTAGGGA 57.869 32.000 8.47 0.00 0.00 4.20
3474 3868 7.744733 ACAAACAAACCATCAAATTTAGGGAT 58.255 30.769 8.47 0.00 0.00 3.85
3475 3869 7.661027 ACAAACAAACCATCAAATTTAGGGATG 59.339 33.333 9.10 9.10 38.47 3.51
3476 3870 6.933514 ACAAACCATCAAATTTAGGGATGT 57.066 33.333 13.14 10.92 37.34 3.06
3477 3871 8.429237 AACAAACCATCAAATTTAGGGATGTA 57.571 30.769 13.14 0.00 37.34 2.29
3478 3872 8.429237 ACAAACCATCAAATTTAGGGATGTAA 57.571 30.769 13.14 0.00 37.34 2.41
3479 3873 8.875168 ACAAACCATCAAATTTAGGGATGTAAA 58.125 29.630 13.14 0.00 37.34 2.01
3480 3874 9.150348 CAAACCATCAAATTTAGGGATGTAAAC 57.850 33.333 13.14 0.00 37.34 2.01
3481 3875 7.418337 ACCATCAAATTTAGGGATGTAAACC 57.582 36.000 13.14 0.00 37.34 3.27
3482 3876 6.096282 ACCATCAAATTTAGGGATGTAAACCG 59.904 38.462 13.14 3.30 37.34 4.44
3483 3877 6.460953 CCATCAAATTTAGGGATGTAAACCGG 60.461 42.308 0.00 0.00 37.34 5.28
3484 3878 4.951094 TCAAATTTAGGGATGTAAACCGGG 59.049 41.667 6.32 0.00 0.00 5.73
3485 3879 4.596354 AATTTAGGGATGTAAACCGGGT 57.404 40.909 6.32 0.00 0.00 5.28
3486 3880 3.632643 TTTAGGGATGTAAACCGGGTC 57.367 47.619 6.32 0.00 0.00 4.46
3487 3881 1.499368 TAGGGATGTAAACCGGGTCC 58.501 55.000 6.32 0.00 0.00 4.46
3488 3882 1.225426 GGGATGTAAACCGGGTCCC 59.775 63.158 6.32 0.62 41.55 4.46
3490 3884 1.598517 GATGTAAACCGGGTCCCGT 59.401 57.895 28.39 13.25 46.80 5.28
3491 3885 0.036105 GATGTAAACCGGGTCCCGTT 60.036 55.000 28.39 19.10 46.80 4.44
3492 3886 0.401356 ATGTAAACCGGGTCCCGTTT 59.599 50.000 28.39 26.09 46.80 3.60
3493 3887 1.051812 TGTAAACCGGGTCCCGTTTA 58.948 50.000 28.39 25.19 46.80 2.01
3494 3888 1.417890 TGTAAACCGGGTCCCGTTTAA 59.582 47.619 28.39 17.40 46.80 1.52
3495 3889 2.158755 TGTAAACCGGGTCCCGTTTAAA 60.159 45.455 28.39 21.77 46.80 1.52
3496 3890 1.608055 AAACCGGGTCCCGTTTAAAG 58.392 50.000 28.39 14.47 46.80 1.85
3497 3891 0.473755 AACCGGGTCCCGTTTAAAGT 59.526 50.000 28.39 15.14 46.80 2.66
3498 3892 0.035317 ACCGGGTCCCGTTTAAAGTC 59.965 55.000 28.39 0.00 46.80 3.01
3499 3893 0.674581 CCGGGTCCCGTTTAAAGTCC 60.675 60.000 28.39 0.00 46.80 3.85
3500 3894 0.035176 CGGGTCCCGTTTAAAGTCCA 59.965 55.000 23.02 0.00 42.73 4.02
3501 3895 1.339342 CGGGTCCCGTTTAAAGTCCAT 60.339 52.381 23.02 0.00 42.73 3.41
3502 3896 2.799017 GGGTCCCGTTTAAAGTCCATT 58.201 47.619 0.00 0.00 0.00 3.16
3503 3897 3.159472 GGGTCCCGTTTAAAGTCCATTT 58.841 45.455 0.00 0.00 34.72 2.32
3504 3898 4.334552 GGGTCCCGTTTAAAGTCCATTTA 58.665 43.478 0.00 0.00 32.01 1.40
3505 3899 4.951715 GGGTCCCGTTTAAAGTCCATTTAT 59.048 41.667 0.00 0.00 33.40 1.40
3506 3900 6.121590 GGGTCCCGTTTAAAGTCCATTTATA 58.878 40.000 0.00 0.00 33.40 0.98
3507 3901 6.602803 GGGTCCCGTTTAAAGTCCATTTATAA 59.397 38.462 0.00 0.00 33.40 0.98
3508 3902 7.286087 GGGTCCCGTTTAAAGTCCATTTATAAT 59.714 37.037 0.00 0.00 33.40 1.28
3509 3903 9.341078 GGTCCCGTTTAAAGTCCATTTATAATA 57.659 33.333 0.00 0.00 33.40 0.98
3565 3959 9.733556 TGAGGAAAATAAACTATCAAACTAGCA 57.266 29.630 0.00 0.00 0.00 3.49
3581 3975 9.453325 TCAAACTAGCAAAAATTAACTAAACGG 57.547 29.630 0.00 0.00 0.00 4.44
3582 3976 9.453325 CAAACTAGCAAAAATTAACTAAACGGA 57.547 29.630 0.00 0.00 0.00 4.69
3587 3981 7.792925 AGCAAAAATTAACTAAACGGAATTGC 58.207 30.769 0.00 0.00 38.73 3.56
3588 3982 6.730177 GCAAAAATTAACTAAACGGAATTGCG 59.270 34.615 18.40 18.40 0.00 4.85
3589 3983 6.937886 AAAATTAACTAAACGGAATTGCGG 57.062 33.333 23.54 7.99 0.00 5.69
3590 3984 5.883503 AATTAACTAAACGGAATTGCGGA 57.116 34.783 23.54 7.44 0.00 5.54
3591 3985 4.666928 TTAACTAAACGGAATTGCGGAC 57.333 40.909 23.54 0.00 0.00 4.79
3592 3986 1.073177 ACTAAACGGAATTGCGGACG 58.927 50.000 23.54 10.81 0.00 4.79
3593 3987 1.073177 CTAAACGGAATTGCGGACGT 58.927 50.000 23.54 7.80 41.88 4.34
3594 3988 1.060122 CTAAACGGAATTGCGGACGTC 59.940 52.381 23.54 7.13 38.79 4.34
3595 3989 0.881159 AAACGGAATTGCGGACGTCA 60.881 50.000 23.54 0.00 38.79 4.35
3596 3990 0.672401 AACGGAATTGCGGACGTCAT 60.672 50.000 23.54 0.00 38.79 3.06
3597 3991 0.672401 ACGGAATTGCGGACGTCATT 60.672 50.000 23.54 8.25 33.92 2.57
3598 3992 0.446222 CGGAATTGCGGACGTCATTT 59.554 50.000 18.91 2.72 0.00 2.32
3599 3993 1.661617 CGGAATTGCGGACGTCATTTA 59.338 47.619 18.91 0.00 0.00 1.40
3600 3994 2.286833 CGGAATTGCGGACGTCATTTAT 59.713 45.455 18.91 2.30 0.00 1.40
3601 3995 3.242608 CGGAATTGCGGACGTCATTTATT 60.243 43.478 18.91 10.92 0.00 1.40
3602 3996 4.668289 GGAATTGCGGACGTCATTTATTT 58.332 39.130 18.91 3.30 0.00 1.40
3603 3997 4.499040 GGAATTGCGGACGTCATTTATTTG 59.501 41.667 18.91 0.00 0.00 2.32
3604 3998 2.535934 TGCGGACGTCATTTATTTGC 57.464 45.000 18.91 7.92 0.00 3.68
3605 3999 1.131504 TGCGGACGTCATTTATTTGCC 59.868 47.619 18.91 0.00 0.00 4.52
3606 4000 1.131504 GCGGACGTCATTTATTTGCCA 59.868 47.619 18.91 0.00 0.00 4.92
3607 4001 2.780993 CGGACGTCATTTATTTGCCAC 58.219 47.619 18.91 0.00 0.00 5.01
3608 4002 2.418628 CGGACGTCATTTATTTGCCACT 59.581 45.455 18.91 0.00 0.00 4.00
3609 4003 3.119990 CGGACGTCATTTATTTGCCACTT 60.120 43.478 18.91 0.00 0.00 3.16
3610 4004 4.093703 CGGACGTCATTTATTTGCCACTTA 59.906 41.667 18.91 0.00 0.00 2.24
3611 4005 5.329493 GGACGTCATTTATTTGCCACTTAC 58.671 41.667 18.91 0.00 0.00 2.34
3612 4006 5.106475 GGACGTCATTTATTTGCCACTTACA 60.106 40.000 18.91 0.00 0.00 2.41
3613 4007 6.404293 GGACGTCATTTATTTGCCACTTACAT 60.404 38.462 18.91 0.00 0.00 2.29
3614 4008 6.551736 ACGTCATTTATTTGCCACTTACATC 58.448 36.000 0.00 0.00 0.00 3.06
3615 4009 5.971202 CGTCATTTATTTGCCACTTACATCC 59.029 40.000 0.00 0.00 0.00 3.51
3616 4010 6.273071 GTCATTTATTTGCCACTTACATCCC 58.727 40.000 0.00 0.00 0.00 3.85
3617 4011 6.096846 GTCATTTATTTGCCACTTACATCCCT 59.903 38.462 0.00 0.00 0.00 4.20
3618 4012 7.284489 GTCATTTATTTGCCACTTACATCCCTA 59.716 37.037 0.00 0.00 0.00 3.53
3784 4184 0.965866 CGACCTAGCTCCCAGTCACA 60.966 60.000 0.00 0.00 0.00 3.58
3788 4188 0.616111 CTAGCTCCCAGTCACACCCT 60.616 60.000 0.00 0.00 0.00 4.34
3891 4301 0.388649 AGTCACAGTTCGGCGATCAC 60.389 55.000 19.04 11.84 0.00 3.06
3956 4399 2.267961 GAATCACTCGGCGGGGTT 59.732 61.111 13.20 2.35 0.00 4.11
4125 4613 1.903404 GGGAGTTGGCAGGTGGTTG 60.903 63.158 0.00 0.00 0.00 3.77
4230 4718 0.396811 CCAGGTCGGTGTTCCTCTTT 59.603 55.000 0.00 0.00 30.91 2.52
4237 4725 1.223187 GGTGTTCCTCTTTTTCGCGA 58.777 50.000 3.71 3.71 0.00 5.87
4251 4739 3.849953 GCGACGATGTTGGTCCGC 61.850 66.667 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.630505 CACTCTTCCAGACACAGATGAATG 59.369 45.833 0.00 0.00 0.00 2.67
1 2 4.529769 TCACTCTTCCAGACACAGATGAAT 59.470 41.667 0.00 0.00 0.00 2.57
3 4 3.500343 TCACTCTTCCAGACACAGATGA 58.500 45.455 0.00 0.00 0.00 2.92
4 5 3.949842 TCACTCTTCCAGACACAGATG 57.050 47.619 0.00 0.00 0.00 2.90
5 6 4.155709 TCTTCACTCTTCCAGACACAGAT 58.844 43.478 0.00 0.00 0.00 2.90
6 7 3.566351 TCTTCACTCTTCCAGACACAGA 58.434 45.455 0.00 0.00 0.00 3.41
7 8 4.244066 CATCTTCACTCTTCCAGACACAG 58.756 47.826 0.00 0.00 0.00 3.66
8 9 3.643320 ACATCTTCACTCTTCCAGACACA 59.357 43.478 0.00 0.00 0.00 3.72
9 10 4.264460 ACATCTTCACTCTTCCAGACAC 57.736 45.455 0.00 0.00 0.00 3.67
10 11 4.963318 AACATCTTCACTCTTCCAGACA 57.037 40.909 0.00 0.00 0.00 3.41
11 12 6.260936 TCAAAAACATCTTCACTCTTCCAGAC 59.739 38.462 0.00 0.00 0.00 3.51
12 13 6.356556 TCAAAAACATCTTCACTCTTCCAGA 58.643 36.000 0.00 0.00 0.00 3.86
13 14 6.624352 TCAAAAACATCTTCACTCTTCCAG 57.376 37.500 0.00 0.00 0.00 3.86
14 15 7.094634 GCTATCAAAAACATCTTCACTCTTCCA 60.095 37.037 0.00 0.00 0.00 3.53
15 16 7.247019 GCTATCAAAAACATCTTCACTCTTCC 58.753 38.462 0.00 0.00 0.00 3.46
16 17 7.120432 AGGCTATCAAAAACATCTTCACTCTTC 59.880 37.037 0.00 0.00 0.00 2.87
17 18 6.944862 AGGCTATCAAAAACATCTTCACTCTT 59.055 34.615 0.00 0.00 0.00 2.85
18 19 6.479884 AGGCTATCAAAAACATCTTCACTCT 58.520 36.000 0.00 0.00 0.00 3.24
19 20 6.597280 AGAGGCTATCAAAAACATCTTCACTC 59.403 38.462 0.00 0.00 0.00 3.51
20 21 6.479884 AGAGGCTATCAAAAACATCTTCACT 58.520 36.000 0.00 0.00 0.00 3.41
21 22 6.597280 AGAGAGGCTATCAAAAACATCTTCAC 59.403 38.462 12.28 0.00 0.00 3.18
22 23 6.596888 CAGAGAGGCTATCAAAAACATCTTCA 59.403 38.462 12.28 0.00 0.00 3.02
23 24 6.820656 TCAGAGAGGCTATCAAAAACATCTTC 59.179 38.462 12.28 0.00 0.00 2.87
24 25 6.715280 TCAGAGAGGCTATCAAAAACATCTT 58.285 36.000 12.28 0.00 0.00 2.40
25 26 6.305272 TCAGAGAGGCTATCAAAAACATCT 57.695 37.500 12.28 0.00 0.00 2.90
26 27 8.719648 CATATCAGAGAGGCTATCAAAAACATC 58.280 37.037 12.28 0.00 0.00 3.06
27 28 8.435187 TCATATCAGAGAGGCTATCAAAAACAT 58.565 33.333 12.28 0.00 0.00 2.71
28 29 7.795047 TCATATCAGAGAGGCTATCAAAAACA 58.205 34.615 12.28 0.00 0.00 2.83
29 30 8.845413 ATCATATCAGAGAGGCTATCAAAAAC 57.155 34.615 12.28 0.00 0.00 2.43
32 33 9.264653 ACATATCATATCAGAGAGGCTATCAAA 57.735 33.333 12.28 0.00 0.00 2.69
33 34 8.693625 CACATATCATATCAGAGAGGCTATCAA 58.306 37.037 12.28 0.00 0.00 2.57
34 35 7.287235 CCACATATCATATCAGAGAGGCTATCA 59.713 40.741 12.28 0.00 0.00 2.15
35 36 7.287466 ACCACATATCATATCAGAGAGGCTATC 59.713 40.741 0.00 0.00 0.00 2.08
36 37 7.131451 ACCACATATCATATCAGAGAGGCTAT 58.869 38.462 0.00 0.00 0.00 2.97
37 38 6.497640 ACCACATATCATATCAGAGAGGCTA 58.502 40.000 0.00 0.00 0.00 3.93
38 39 5.340322 ACCACATATCATATCAGAGAGGCT 58.660 41.667 0.00 0.00 0.00 4.58
39 40 5.674052 ACCACATATCATATCAGAGAGGC 57.326 43.478 0.00 0.00 0.00 4.70
40 41 8.465999 GTTCTACCACATATCATATCAGAGAGG 58.534 40.741 0.00 0.00 0.00 3.69
41 42 8.465999 GGTTCTACCACATATCATATCAGAGAG 58.534 40.741 0.00 0.00 38.42 3.20
42 43 8.173412 AGGTTCTACCACATATCATATCAGAGA 58.827 37.037 0.00 0.00 41.95 3.10
43 44 8.359875 AGGTTCTACCACATATCATATCAGAG 57.640 38.462 0.00 0.00 41.95 3.35
44 45 8.588472 CAAGGTTCTACCACATATCATATCAGA 58.412 37.037 0.00 0.00 41.95 3.27
45 46 8.370940 ACAAGGTTCTACCACATATCATATCAG 58.629 37.037 0.00 0.00 41.95 2.90
46 47 8.150296 CACAAGGTTCTACCACATATCATATCA 58.850 37.037 0.00 0.00 41.95 2.15
47 48 7.118390 GCACAAGGTTCTACCACATATCATATC 59.882 40.741 0.00 0.00 41.95 1.63
48 49 6.936900 GCACAAGGTTCTACCACATATCATAT 59.063 38.462 0.00 0.00 41.95 1.78
49 50 6.288294 GCACAAGGTTCTACCACATATCATA 58.712 40.000 0.00 0.00 41.95 2.15
50 51 5.126067 GCACAAGGTTCTACCACATATCAT 58.874 41.667 0.00 0.00 41.95 2.45
51 52 4.513442 GCACAAGGTTCTACCACATATCA 58.487 43.478 0.00 0.00 41.95 2.15
52 53 3.877508 GGCACAAGGTTCTACCACATATC 59.122 47.826 0.00 0.00 41.95 1.63
53 54 3.265737 TGGCACAAGGTTCTACCACATAT 59.734 43.478 0.00 0.00 41.95 1.78
57 58 1.235724 GTGGCACAAGGTTCTACCAC 58.764 55.000 13.86 0.00 44.16 4.16
63 64 0.314935 CCACATGTGGCACAAGGTTC 59.685 55.000 31.13 0.00 44.16 3.62
79 80 3.937778 ACTCTCTCTCTACCCTACCAC 57.062 52.381 0.00 0.00 0.00 4.16
82 83 6.057533 GGACTAAACTCTCTCTCTACCCTAC 58.942 48.000 0.00 0.00 0.00 3.18
83 84 5.730207 TGGACTAAACTCTCTCTCTACCCTA 59.270 44.000 0.00 0.00 0.00 3.53
84 85 4.540906 TGGACTAAACTCTCTCTCTACCCT 59.459 45.833 0.00 0.00 0.00 4.34
86 87 5.503002 ACTGGACTAAACTCTCTCTCTACC 58.497 45.833 0.00 0.00 0.00 3.18
88 89 7.232188 TCAAACTGGACTAAACTCTCTCTCTA 58.768 38.462 0.00 0.00 0.00 2.43
89 90 6.071984 TCAAACTGGACTAAACTCTCTCTCT 58.928 40.000 0.00 0.00 0.00 3.10
90 91 6.334102 TCAAACTGGACTAAACTCTCTCTC 57.666 41.667 0.00 0.00 0.00 3.20
92 93 5.402867 CGTTCAAACTGGACTAAACTCTCTC 59.597 44.000 0.00 0.00 0.00 3.20
103 104 2.553079 TTTGCACGTTCAAACTGGAC 57.447 45.000 9.35 0.00 31.64 4.02
104 105 3.246619 GTTTTTGCACGTTCAAACTGGA 58.753 40.909 12.95 0.00 35.86 3.86
126 127 3.691744 CTCCGAGGTCGCTGCAGAC 62.692 68.421 20.43 7.84 40.25 3.51
156 157 3.366052 TTCTTTTAGGGACCTGGCATC 57.634 47.619 0.00 0.00 0.00 3.91
182 188 1.444895 CTGCCGTGCCAAGCATTTC 60.445 57.895 0.00 0.00 41.91 2.17
193 199 3.865929 AAGACGTCTGCCTGCCGTG 62.866 63.158 20.85 0.00 34.51 4.94
194 200 3.616721 AAGACGTCTGCCTGCCGT 61.617 61.111 20.85 0.00 37.56 5.68
212 218 5.428496 TGCTGCATGACTAGATTTATTGC 57.572 39.130 0.00 0.00 0.00 3.56
231 237 1.694150 TCACAACTGGACTAAGCTGCT 59.306 47.619 0.00 0.00 0.00 4.24
232 238 2.169832 TCACAACTGGACTAAGCTGC 57.830 50.000 0.00 0.00 0.00 5.25
233 239 2.808543 GGTTCACAACTGGACTAAGCTG 59.191 50.000 0.00 0.00 0.00 4.24
234 240 2.438021 TGGTTCACAACTGGACTAAGCT 59.562 45.455 0.00 0.00 0.00 3.74
235 241 2.846193 TGGTTCACAACTGGACTAAGC 58.154 47.619 0.00 0.00 0.00 3.09
257 263 4.455877 GTCTCTTTAACCATCCAACACTGG 59.544 45.833 0.00 0.00 45.08 4.00
258 264 5.180117 CAGTCTCTTTAACCATCCAACACTG 59.820 44.000 0.00 0.00 0.00 3.66
259 265 5.163195 ACAGTCTCTTTAACCATCCAACACT 60.163 40.000 0.00 0.00 0.00 3.55
260 266 5.049405 CACAGTCTCTTTAACCATCCAACAC 60.049 44.000 0.00 0.00 0.00 3.32
261 267 5.063204 CACAGTCTCTTTAACCATCCAACA 58.937 41.667 0.00 0.00 0.00 3.33
262 268 5.305585 TCACAGTCTCTTTAACCATCCAAC 58.694 41.667 0.00 0.00 0.00 3.77
263 269 5.560722 TCACAGTCTCTTTAACCATCCAA 57.439 39.130 0.00 0.00 0.00 3.53
264 270 5.762179 ATCACAGTCTCTTTAACCATCCA 57.238 39.130 0.00 0.00 0.00 3.41
265 271 6.931840 GGATATCACAGTCTCTTTAACCATCC 59.068 42.308 4.83 0.00 0.00 3.51
266 272 7.731054 AGGATATCACAGTCTCTTTAACCATC 58.269 38.462 4.83 0.00 0.00 3.51
267 273 7.345653 TGAGGATATCACAGTCTCTTTAACCAT 59.654 37.037 4.83 0.00 31.12 3.55
268 274 6.667848 TGAGGATATCACAGTCTCTTTAACCA 59.332 38.462 4.83 0.00 31.12 3.67
269 275 7.113658 TGAGGATATCACAGTCTCTTTAACC 57.886 40.000 4.83 0.00 31.12 2.85
270 276 7.492994 GGTTGAGGATATCACAGTCTCTTTAAC 59.507 40.741 4.83 2.98 37.77 2.01
271 277 7.364762 GGGTTGAGGATATCACAGTCTCTTTAA 60.365 40.741 4.83 0.00 37.77 1.52
272 278 6.098409 GGGTTGAGGATATCACAGTCTCTTTA 59.902 42.308 4.83 0.00 37.77 1.85
273 279 5.104735 GGGTTGAGGATATCACAGTCTCTTT 60.105 44.000 4.83 0.00 37.77 2.52
274 280 4.407296 GGGTTGAGGATATCACAGTCTCTT 59.593 45.833 4.83 0.00 37.77 2.85
275 281 3.964031 GGGTTGAGGATATCACAGTCTCT 59.036 47.826 4.83 0.00 37.77 3.10
276 282 3.070302 GGGGTTGAGGATATCACAGTCTC 59.930 52.174 4.83 2.25 37.77 3.36
277 283 3.041946 GGGGTTGAGGATATCACAGTCT 58.958 50.000 4.83 0.00 37.77 3.24
278 284 3.041946 AGGGGTTGAGGATATCACAGTC 58.958 50.000 4.83 0.00 37.77 3.51
279 285 3.041946 GAGGGGTTGAGGATATCACAGT 58.958 50.000 4.83 0.00 37.77 3.55
280 286 3.041211 TGAGGGGTTGAGGATATCACAG 58.959 50.000 4.83 0.00 37.77 3.66
281 287 3.041211 CTGAGGGGTTGAGGATATCACA 58.959 50.000 4.83 1.48 37.77 3.58
282 288 2.370189 CCTGAGGGGTTGAGGATATCAC 59.630 54.545 4.83 0.00 37.77 3.06
283 289 2.694397 CCTGAGGGGTTGAGGATATCA 58.306 52.381 4.83 0.00 35.62 2.15
301 307 1.073923 CAAGCACCAGGACTTAACCCT 59.926 52.381 0.00 0.00 0.00 4.34
302 308 1.534729 CAAGCACCAGGACTTAACCC 58.465 55.000 0.00 0.00 0.00 4.11
303 309 0.881796 GCAAGCACCAGGACTTAACC 59.118 55.000 0.00 0.00 0.00 2.85
304 310 1.604604 TGCAAGCACCAGGACTTAAC 58.395 50.000 0.00 0.00 0.00 2.01
305 311 2.584835 ATGCAAGCACCAGGACTTAA 57.415 45.000 0.00 0.00 0.00 1.85
306 312 2.584835 AATGCAAGCACCAGGACTTA 57.415 45.000 0.00 0.00 0.00 2.24
307 313 2.584835 TAATGCAAGCACCAGGACTT 57.415 45.000 0.00 0.00 0.00 3.01
308 314 2.814805 ATAATGCAAGCACCAGGACT 57.185 45.000 0.00 0.00 0.00 3.85
309 315 3.316308 CCTAATAATGCAAGCACCAGGAC 59.684 47.826 0.00 0.00 0.00 3.85
310 316 3.554934 CCTAATAATGCAAGCACCAGGA 58.445 45.455 0.00 0.00 0.00 3.86
311 317 2.035066 GCCTAATAATGCAAGCACCAGG 59.965 50.000 0.00 1.28 0.00 4.45
312 318 2.035066 GGCCTAATAATGCAAGCACCAG 59.965 50.000 0.00 0.00 0.00 4.00
313 319 2.031120 GGCCTAATAATGCAAGCACCA 58.969 47.619 0.00 0.00 0.00 4.17
314 320 2.310538 AGGCCTAATAATGCAAGCACC 58.689 47.619 1.29 0.00 0.00 5.01
315 321 3.131046 ACAAGGCCTAATAATGCAAGCAC 59.869 43.478 5.16 0.00 0.00 4.40
316 322 3.364549 ACAAGGCCTAATAATGCAAGCA 58.635 40.909 5.16 0.00 0.00 3.91
317 323 4.338118 TGTACAAGGCCTAATAATGCAAGC 59.662 41.667 5.16 0.00 0.00 4.01
318 324 6.449635 TTGTACAAGGCCTAATAATGCAAG 57.550 37.500 5.16 0.00 0.00 4.01
319 325 6.183360 CCATTGTACAAGGCCTAATAATGCAA 60.183 38.462 14.66 6.65 0.00 4.08
320 326 5.301551 CCATTGTACAAGGCCTAATAATGCA 59.698 40.000 14.66 0.00 0.00 3.96
321 327 5.278957 CCCATTGTACAAGGCCTAATAATGC 60.279 44.000 14.66 0.00 0.00 3.56
322 328 6.068010 TCCCATTGTACAAGGCCTAATAATG 58.932 40.000 14.66 14.37 0.00 1.90
323 329 6.274322 TCCCATTGTACAAGGCCTAATAAT 57.726 37.500 14.66 2.05 0.00 1.28
324 330 5.398581 CCTCCCATTGTACAAGGCCTAATAA 60.399 44.000 14.66 0.00 0.00 1.40
325 331 4.104102 CCTCCCATTGTACAAGGCCTAATA 59.896 45.833 14.66 0.00 0.00 0.98
326 332 3.117512 CCTCCCATTGTACAAGGCCTAAT 60.118 47.826 14.66 0.00 0.00 1.73
327 333 2.241176 CCTCCCATTGTACAAGGCCTAA 59.759 50.000 14.66 0.00 0.00 2.69
328 334 1.843851 CCTCCCATTGTACAAGGCCTA 59.156 52.381 14.66 1.57 0.00 3.93
329 335 0.625849 CCTCCCATTGTACAAGGCCT 59.374 55.000 14.66 0.00 0.00 5.19
330 336 0.331616 ACCTCCCATTGTACAAGGCC 59.668 55.000 14.66 0.00 0.00 5.19
331 337 1.463674 CACCTCCCATTGTACAAGGC 58.536 55.000 14.66 0.00 0.00 4.35
332 338 1.004745 AGCACCTCCCATTGTACAAGG 59.995 52.381 14.65 13.92 0.00 3.61
333 339 2.496899 AGCACCTCCCATTGTACAAG 57.503 50.000 14.65 6.30 0.00 3.16
334 340 2.969821 AAGCACCTCCCATTGTACAA 57.030 45.000 11.41 11.41 0.00 2.41
335 341 2.238646 CCTAAGCACCTCCCATTGTACA 59.761 50.000 0.00 0.00 0.00 2.90
336 342 2.421529 CCCTAAGCACCTCCCATTGTAC 60.422 54.545 0.00 0.00 0.00 2.90
337 343 1.843851 CCCTAAGCACCTCCCATTGTA 59.156 52.381 0.00 0.00 0.00 2.41
338 344 0.625849 CCCTAAGCACCTCCCATTGT 59.374 55.000 0.00 0.00 0.00 2.71
339 345 0.106519 CCCCTAAGCACCTCCCATTG 60.107 60.000 0.00 0.00 0.00 2.82
340 346 0.253630 TCCCCTAAGCACCTCCCATT 60.254 55.000 0.00 0.00 0.00 3.16
341 347 0.695803 CTCCCCTAAGCACCTCCCAT 60.696 60.000 0.00 0.00 0.00 4.00
342 348 1.306997 CTCCCCTAAGCACCTCCCA 60.307 63.158 0.00 0.00 0.00 4.37
343 349 2.073101 CCTCCCCTAAGCACCTCCC 61.073 68.421 0.00 0.00 0.00 4.30
344 350 1.307084 ACCTCCCCTAAGCACCTCC 60.307 63.158 0.00 0.00 0.00 4.30
345 351 1.908483 CACCTCCCCTAAGCACCTC 59.092 63.158 0.00 0.00 0.00 3.85
346 352 2.301738 GCACCTCCCCTAAGCACCT 61.302 63.158 0.00 0.00 0.00 4.00
347 353 1.853250 AAGCACCTCCCCTAAGCACC 61.853 60.000 0.00 0.00 0.00 5.01
348 354 0.909623 TAAGCACCTCCCCTAAGCAC 59.090 55.000 0.00 0.00 0.00 4.40
349 355 1.204146 CTAAGCACCTCCCCTAAGCA 58.796 55.000 0.00 0.00 0.00 3.91
350 356 1.414550 CTCTAAGCACCTCCCCTAAGC 59.585 57.143 0.00 0.00 0.00 3.09
351 357 3.033659 TCTCTAAGCACCTCCCCTAAG 57.966 52.381 0.00 0.00 0.00 2.18
352 358 3.484953 TTCTCTAAGCACCTCCCCTAA 57.515 47.619 0.00 0.00 0.00 2.69
353 359 3.484953 TTTCTCTAAGCACCTCCCCTA 57.515 47.619 0.00 0.00 0.00 3.53
354 360 2.344093 TTTCTCTAAGCACCTCCCCT 57.656 50.000 0.00 0.00 0.00 4.79
355 361 4.772886 TTATTTCTCTAAGCACCTCCCC 57.227 45.455 0.00 0.00 0.00 4.81
356 362 4.882427 GGTTTATTTCTCTAAGCACCTCCC 59.118 45.833 0.00 0.00 0.00 4.30
357 363 5.497474 TGGTTTATTTCTCTAAGCACCTCC 58.503 41.667 0.00 0.00 0.00 4.30
358 364 6.314152 GTCTGGTTTATTTCTCTAAGCACCTC 59.686 42.308 0.00 0.00 0.00 3.85
359 365 6.013293 AGTCTGGTTTATTTCTCTAAGCACCT 60.013 38.462 0.00 0.00 0.00 4.00
360 366 6.174049 AGTCTGGTTTATTTCTCTAAGCACC 58.826 40.000 0.00 0.00 0.00 5.01
361 367 7.674471 AAGTCTGGTTTATTTCTCTAAGCAC 57.326 36.000 0.00 0.00 0.00 4.40
362 368 8.691661 AAAAGTCTGGTTTATTTCTCTAAGCA 57.308 30.769 0.00 0.00 0.00 3.91
363 369 9.004717 AGAAAAGTCTGGTTTATTTCTCTAAGC 57.995 33.333 0.00 0.00 35.96 3.09
368 374 9.613957 GCTTAAGAAAAGTCTGGTTTATTTCTC 57.386 33.333 6.67 0.00 38.89 2.87
369 375 9.131791 TGCTTAAGAAAAGTCTGGTTTATTTCT 57.868 29.630 6.67 0.00 40.90 2.52
370 376 9.181805 GTGCTTAAGAAAAGTCTGGTTTATTTC 57.818 33.333 6.67 0.00 33.05 2.17
371 377 8.141909 GGTGCTTAAGAAAAGTCTGGTTTATTT 58.858 33.333 6.67 0.00 33.05 1.40
372 378 7.521585 CGGTGCTTAAGAAAAGTCTGGTTTATT 60.522 37.037 6.67 0.00 33.05 1.40
373 379 6.072673 CGGTGCTTAAGAAAAGTCTGGTTTAT 60.073 38.462 6.67 0.00 33.05 1.40
374 380 5.237779 CGGTGCTTAAGAAAAGTCTGGTTTA 59.762 40.000 6.67 0.00 33.05 2.01
375 381 4.036380 CGGTGCTTAAGAAAAGTCTGGTTT 59.964 41.667 6.67 0.00 33.05 3.27
376 382 3.564225 CGGTGCTTAAGAAAAGTCTGGTT 59.436 43.478 6.67 0.00 33.05 3.67
377 383 3.139077 CGGTGCTTAAGAAAAGTCTGGT 58.861 45.455 6.67 0.00 33.05 4.00
378 384 2.484264 CCGGTGCTTAAGAAAAGTCTGG 59.516 50.000 6.67 0.00 33.05 3.86
379 385 3.058914 CACCGGTGCTTAAGAAAAGTCTG 60.059 47.826 24.02 0.00 33.05 3.51
380 386 3.139077 CACCGGTGCTTAAGAAAAGTCT 58.861 45.455 24.02 0.00 34.72 3.24
381 387 3.537793 CACCGGTGCTTAAGAAAAGTC 57.462 47.619 24.02 0.00 0.00 3.01
394 400 2.418628 CCTGTACAAATAAGCACCGGTG 59.581 50.000 30.66 30.66 0.00 4.94
395 401 2.303600 TCCTGTACAAATAAGCACCGGT 59.696 45.455 0.00 0.00 0.00 5.28
396 402 2.980568 TCCTGTACAAATAAGCACCGG 58.019 47.619 0.00 0.00 0.00 5.28
397 403 5.462398 GTCTATCCTGTACAAATAAGCACCG 59.538 44.000 0.00 0.00 0.00 4.94
398 404 5.462398 CGTCTATCCTGTACAAATAAGCACC 59.538 44.000 0.00 0.00 0.00 5.01
399 405 5.050972 GCGTCTATCCTGTACAAATAAGCAC 60.051 44.000 0.00 0.00 0.00 4.40
400 406 5.047847 GCGTCTATCCTGTACAAATAAGCA 58.952 41.667 0.00 0.00 0.00 3.91
401 407 5.290386 AGCGTCTATCCTGTACAAATAAGC 58.710 41.667 0.00 4.79 0.00 3.09
402 408 8.753175 GTTAAGCGTCTATCCTGTACAAATAAG 58.247 37.037 0.00 0.00 0.00 1.73
403 409 8.472413 AGTTAAGCGTCTATCCTGTACAAATAA 58.528 33.333 0.00 0.00 0.00 1.40
404 410 8.004087 AGTTAAGCGTCTATCCTGTACAAATA 57.996 34.615 0.00 0.00 0.00 1.40
405 411 6.875076 AGTTAAGCGTCTATCCTGTACAAAT 58.125 36.000 0.00 0.00 0.00 2.32
406 412 6.276832 AGTTAAGCGTCTATCCTGTACAAA 57.723 37.500 0.00 0.00 0.00 2.83
407 413 5.909621 AGTTAAGCGTCTATCCTGTACAA 57.090 39.130 0.00 0.00 0.00 2.41
408 414 7.024340 CTTAGTTAAGCGTCTATCCTGTACA 57.976 40.000 0.00 0.00 0.00 2.90
422 428 9.223557 TTCTACAGGAGAGACGCTTAGTTAAGC 62.224 44.444 12.72 12.72 44.08 3.09
423 429 4.705337 ACAGGAGAGACGCTTAGTTAAG 57.295 45.455 0.00 0.00 36.40 1.85
424 430 5.494724 TCTACAGGAGAGACGCTTAGTTAA 58.505 41.667 0.00 0.00 0.00 2.01
425 431 5.095145 TCTACAGGAGAGACGCTTAGTTA 57.905 43.478 0.00 0.00 0.00 2.24
426 432 3.952931 TCTACAGGAGAGACGCTTAGTT 58.047 45.455 0.00 0.00 0.00 2.24
427 433 3.630892 TCTACAGGAGAGACGCTTAGT 57.369 47.619 0.00 0.00 0.00 2.24
428 434 4.966965 TTTCTACAGGAGAGACGCTTAG 57.033 45.455 0.00 0.00 34.93 2.18
429 435 5.531659 CCTATTTCTACAGGAGAGACGCTTA 59.468 44.000 0.00 0.00 34.93 3.09
430 436 4.339814 CCTATTTCTACAGGAGAGACGCTT 59.660 45.833 0.00 0.00 34.93 4.68
431 437 3.886505 CCTATTTCTACAGGAGAGACGCT 59.113 47.826 0.00 0.00 34.93 5.07
432 438 3.551250 GCCTATTTCTACAGGAGAGACGC 60.551 52.174 0.00 0.00 34.93 5.19
433 439 3.632604 TGCCTATTTCTACAGGAGAGACG 59.367 47.826 0.00 0.00 34.93 4.18
434 440 4.202172 GGTGCCTATTTCTACAGGAGAGAC 60.202 50.000 0.00 0.00 34.93 3.36
435 441 3.961408 GGTGCCTATTTCTACAGGAGAGA 59.039 47.826 0.00 0.00 34.93 3.10
436 442 3.243569 CGGTGCCTATTTCTACAGGAGAG 60.244 52.174 0.00 0.00 34.93 3.20
437 443 2.693591 CGGTGCCTATTTCTACAGGAGA 59.306 50.000 0.00 0.00 33.42 3.71
438 444 2.224066 CCGGTGCCTATTTCTACAGGAG 60.224 54.545 0.00 0.00 33.42 3.69
439 445 1.760613 CCGGTGCCTATTTCTACAGGA 59.239 52.381 0.00 0.00 33.42 3.86
440 446 1.485066 ACCGGTGCCTATTTCTACAGG 59.515 52.381 6.12 0.00 35.04 4.00
441 447 2.550978 CACCGGTGCCTATTTCTACAG 58.449 52.381 24.02 0.00 0.00 2.74
442 448 2.684001 CACCGGTGCCTATTTCTACA 57.316 50.000 24.02 0.00 0.00 2.74
472 478 8.803235 GGAGATGTTTAGAAAAATAAACCAGGT 58.197 33.333 6.84 0.00 42.45 4.00
473 479 8.251026 GGGAGATGTTTAGAAAAATAAACCAGG 58.749 37.037 6.84 0.00 42.45 4.45
474 480 9.025041 AGGGAGATGTTTAGAAAAATAAACCAG 57.975 33.333 6.84 0.00 42.45 4.00
475 481 8.950007 AGGGAGATGTTTAGAAAAATAAACCA 57.050 30.769 6.84 0.00 42.45 3.67
479 485 9.747898 TGCTTAGGGAGATGTTTAGAAAAATAA 57.252 29.630 0.00 0.00 0.00 1.40
480 486 9.174166 GTGCTTAGGGAGATGTTTAGAAAAATA 57.826 33.333 0.00 0.00 0.00 1.40
481 487 7.122799 GGTGCTTAGGGAGATGTTTAGAAAAAT 59.877 37.037 0.00 0.00 0.00 1.82
482 488 6.433093 GGTGCTTAGGGAGATGTTTAGAAAAA 59.567 38.462 0.00 0.00 0.00 1.94
483 489 5.944007 GGTGCTTAGGGAGATGTTTAGAAAA 59.056 40.000 0.00 0.00 0.00 2.29
484 490 5.250774 AGGTGCTTAGGGAGATGTTTAGAAA 59.749 40.000 0.00 0.00 0.00 2.52
485 491 4.783227 AGGTGCTTAGGGAGATGTTTAGAA 59.217 41.667 0.00 0.00 0.00 2.10
486 492 4.362677 AGGTGCTTAGGGAGATGTTTAGA 58.637 43.478 0.00 0.00 0.00 2.10
487 493 4.762289 AGGTGCTTAGGGAGATGTTTAG 57.238 45.455 0.00 0.00 0.00 1.85
488 494 4.080526 GGAAGGTGCTTAGGGAGATGTTTA 60.081 45.833 0.00 0.00 0.00 2.01
489 495 3.308473 GGAAGGTGCTTAGGGAGATGTTT 60.308 47.826 0.00 0.00 0.00 2.83
490 496 2.239907 GGAAGGTGCTTAGGGAGATGTT 59.760 50.000 0.00 0.00 0.00 2.71
491 497 1.840635 GGAAGGTGCTTAGGGAGATGT 59.159 52.381 0.00 0.00 0.00 3.06
492 498 1.202580 CGGAAGGTGCTTAGGGAGATG 60.203 57.143 0.00 0.00 0.00 2.90
493 499 1.123928 CGGAAGGTGCTTAGGGAGAT 58.876 55.000 0.00 0.00 0.00 2.75
494 500 2.591915 CGGAAGGTGCTTAGGGAGA 58.408 57.895 0.00 0.00 0.00 3.71
507 513 0.966370 AACGTCTCCTCTCCCGGAAG 60.966 60.000 0.73 0.00 31.44 3.46
508 514 0.964358 GAACGTCTCCTCTCCCGGAA 60.964 60.000 0.73 0.00 31.44 4.30
509 515 1.378250 GAACGTCTCCTCTCCCGGA 60.378 63.158 0.73 0.00 0.00 5.14
510 516 2.416432 GGAACGTCTCCTCTCCCGG 61.416 68.421 0.00 0.00 41.61 5.73
511 517 3.198582 GGAACGTCTCCTCTCCCG 58.801 66.667 8.87 0.00 41.61 5.14
518 524 0.313043 TTGTCGACAGGAACGTCTCC 59.687 55.000 19.11 8.26 45.81 3.71
519 525 1.268896 TGTTGTCGACAGGAACGTCTC 60.269 52.381 19.11 3.26 33.40 3.36
520 526 0.742505 TGTTGTCGACAGGAACGTCT 59.257 50.000 19.11 0.00 33.40 4.18
521 527 0.850856 GTGTTGTCGACAGGAACGTC 59.149 55.000 19.11 7.99 39.39 4.34
522 528 0.458669 AGTGTTGTCGACAGGAACGT 59.541 50.000 19.11 3.25 39.39 3.99
523 529 0.852777 CAGTGTTGTCGACAGGAACG 59.147 55.000 19.11 10.41 39.39 3.95
524 530 2.218953 TCAGTGTTGTCGACAGGAAC 57.781 50.000 19.11 16.99 39.39 3.62
525 531 2.102420 ACATCAGTGTTGTCGACAGGAA 59.898 45.455 19.11 5.58 39.39 3.36
526 532 1.686587 ACATCAGTGTTGTCGACAGGA 59.313 47.619 19.11 12.41 39.39 3.86
527 533 2.154854 ACATCAGTGTTGTCGACAGG 57.845 50.000 19.11 7.53 39.39 4.00
551 557 4.202243 TGCAATTGGACTAAGCTGCTTTTT 60.202 37.500 21.29 7.69 34.06 1.94
552 558 3.321682 TGCAATTGGACTAAGCTGCTTTT 59.678 39.130 21.29 8.08 34.06 2.27
553 559 2.892852 TGCAATTGGACTAAGCTGCTTT 59.107 40.909 21.29 2.78 34.06 3.51
554 560 2.517959 TGCAATTGGACTAAGCTGCTT 58.482 42.857 19.93 19.93 34.06 3.91
620 627 3.928727 TTAGGACGGTGACTACAAGTG 57.071 47.619 0.00 0.00 0.00 3.16
687 697 4.221422 ACATGGATCGGACGGGCG 62.221 66.667 0.00 0.00 0.00 6.13
688 698 2.588877 CACATGGATCGGACGGGC 60.589 66.667 0.00 0.00 0.00 6.13
689 699 2.588877 GCACATGGATCGGACGGG 60.589 66.667 0.00 0.00 0.00 5.28
690 700 2.588877 GGCACATGGATCGGACGG 60.589 66.667 0.00 0.00 0.00 4.79
736 746 0.390860 GTGGTCAGTGACTCAGTGCT 59.609 55.000 22.18 0.00 35.04 4.40
753 763 2.806198 CGCTTTGGCAATGGCGTG 60.806 61.111 27.70 11.01 42.23 5.34
770 780 3.243002 GCAGATTAGATTGGCAACTGCTC 60.243 47.826 23.21 10.00 43.54 4.26
771 781 2.686915 GCAGATTAGATTGGCAACTGCT 59.313 45.455 23.21 14.75 43.54 4.24
772 782 2.223665 GGCAGATTAGATTGGCAACTGC 60.224 50.000 22.71 22.71 45.29 4.40
773 783 3.018856 TGGCAGATTAGATTGGCAACTG 58.981 45.455 0.00 5.45 45.36 3.16
774 784 3.370840 TGGCAGATTAGATTGGCAACT 57.629 42.857 0.00 4.80 45.36 3.16
831 841 1.097547 CATCGATCCGGCAAAAGGCT 61.098 55.000 0.00 0.00 44.01 4.58
839 849 2.591715 CAACCCCATCGATCCGGC 60.592 66.667 0.00 0.00 0.00 6.13
843 853 1.024579 ACGCAACAACCCCATCGATC 61.025 55.000 0.00 0.00 0.00 3.69
844 854 1.002624 ACGCAACAACCCCATCGAT 60.003 52.632 0.00 0.00 0.00 3.59
910 938 4.841443 TGAACGTCATATAGTATGCCGT 57.159 40.909 0.81 0.81 0.00 5.68
911 939 4.798907 GGATGAACGTCATATAGTATGCCG 59.201 45.833 0.00 0.00 37.20 5.69
928 982 1.304254 CACACACACCAACGGATGAA 58.696 50.000 0.00 0.00 0.00 2.57
929 983 0.179234 ACACACACACCAACGGATGA 59.821 50.000 0.00 0.00 0.00 2.92
931 985 0.817634 CCACACACACACCAACGGAT 60.818 55.000 0.00 0.00 0.00 4.18
933 987 3.106552 CCACACACACACCAACGG 58.893 61.111 0.00 0.00 0.00 4.44
937 991 1.029408 GTTGAGCCACACACACACCA 61.029 55.000 0.00 0.00 0.00 4.17
949 1003 0.398318 AGAAGACCAGTGGTTGAGCC 59.602 55.000 17.93 2.66 35.25 4.70
984 1040 1.073923 CCAACTAACTGCTCCCTTGGT 59.926 52.381 0.00 0.00 0.00 3.67
1016 1073 0.461961 CCAGTAGCCAGTAGCCAGTC 59.538 60.000 0.00 0.00 45.47 3.51
1056 1113 4.227134 CCCACCCCATCGCTCTCG 62.227 72.222 0.00 0.00 0.00 4.04
1057 1114 4.554036 GCCCACCCCATCGCTCTC 62.554 72.222 0.00 0.00 0.00 3.20
1289 1393 1.227409 CGTATGCGTGTGGCCCATA 60.227 57.895 0.00 0.00 42.61 2.74
1290 1394 2.513666 CGTATGCGTGTGGCCCAT 60.514 61.111 0.00 0.00 42.61 4.00
1305 1409 2.644212 CCAGCTCTCTCACCTGCGT 61.644 63.158 0.00 0.00 0.00 5.24
1316 1430 2.686835 GGGCAGTCCTCCAGCTCT 60.687 66.667 0.00 0.00 0.00 4.09
1466 1580 3.842923 ATGACGAGCCTGGCGAGG 61.843 66.667 13.96 10.99 43.19 4.63
1496 1610 0.872021 CGAAGGCGAGGTAGATGTGC 60.872 60.000 0.00 0.00 40.82 4.57
1535 1649 2.766828 GGTAGCATGTACCTGGTCTCTT 59.233 50.000 0.63 0.00 34.82 2.85
1538 1652 2.552093 AGGTAGCATGTACCTGGTCT 57.448 50.000 19.84 0.00 45.56 3.85
1608 1722 9.243105 ACAACTAGTTTGGTTATGAAATGCTAT 57.757 29.630 5.07 0.00 39.84 2.97
1687 1804 9.765795 ATTTCCTCGATATCTAACTAAAAGTGG 57.234 33.333 0.34 0.00 0.00 4.00
1703 1820 5.649782 AAAATTCAGTGCATTTCCTCGAT 57.350 34.783 1.09 0.00 0.00 3.59
1705 1824 5.221880 TGAAAAATTCAGTGCATTTCCTCG 58.778 37.500 1.09 0.00 34.08 4.63
1743 1864 2.708216 TGCTGAGATATTTTGGCCGA 57.292 45.000 0.00 0.00 0.00 5.54
1817 1940 4.920376 CGGAAACATTCGCTGGAATTTAT 58.080 39.130 0.00 0.00 40.90 1.40
1846 1969 2.423185 TCATTCGATTTGCATTTCGGCT 59.577 40.909 16.02 4.35 36.08 5.52
1872 1996 5.567138 AAGTCACCGAAATTCCATGAATC 57.433 39.130 0.00 0.00 30.29 2.52
1879 2003 3.181510 CCAATCGAAGTCACCGAAATTCC 60.182 47.826 0.00 0.00 39.62 3.01
1888 2012 2.074547 TCGGAACCAATCGAAGTCAC 57.925 50.000 0.00 0.00 32.11 3.67
1892 2016 4.419522 AACATTTCGGAACCAATCGAAG 57.580 40.909 0.00 0.00 44.47 3.79
1895 2019 4.390603 TCAGTAACATTTCGGAACCAATCG 59.609 41.667 0.00 0.00 0.00 3.34
1896 2020 5.873179 TCAGTAACATTTCGGAACCAATC 57.127 39.130 0.00 0.00 0.00 2.67
1897 2021 6.264518 AGTTTCAGTAACATTTCGGAACCAAT 59.735 34.615 0.00 0.00 39.30 3.16
1901 2025 6.295039 TCAGTTTCAGTAACATTTCGGAAC 57.705 37.500 0.00 0.00 39.30 3.62
1903 2027 6.512741 GCTTTCAGTTTCAGTAACATTTCGGA 60.513 38.462 0.00 0.00 39.30 4.55
1911 2035 4.789095 TGTCGCTTTCAGTTTCAGTAAC 57.211 40.909 0.00 0.00 36.99 2.50
1914 2038 2.354821 GGTTGTCGCTTTCAGTTTCAGT 59.645 45.455 0.00 0.00 0.00 3.41
1928 2052 1.261354 CACACACACAGATGGTTGTCG 59.739 52.381 0.00 0.00 0.00 4.35
1931 2055 2.945008 AGAACACACACACAGATGGTTG 59.055 45.455 0.00 0.00 0.00 3.77
1937 2062 1.138859 CCCTGAGAACACACACACAGA 59.861 52.381 0.00 0.00 0.00 3.41
1938 2063 1.134401 ACCCTGAGAACACACACACAG 60.134 52.381 0.00 0.00 0.00 3.66
1939 2064 0.908910 ACCCTGAGAACACACACACA 59.091 50.000 0.00 0.00 0.00 3.72
1940 2065 1.299541 CACCCTGAGAACACACACAC 58.700 55.000 0.00 0.00 0.00 3.82
1967 2103 2.205022 TGAAGTGGCTTTGATCCCTG 57.795 50.000 0.00 0.00 0.00 4.45
2083 2223 2.443255 AGCTGTCTCCTTCCCTCAAAAA 59.557 45.455 0.00 0.00 0.00 1.94
2084 2224 2.057922 AGCTGTCTCCTTCCCTCAAAA 58.942 47.619 0.00 0.00 0.00 2.44
2085 2225 1.734655 AGCTGTCTCCTTCCCTCAAA 58.265 50.000 0.00 0.00 0.00 2.69
2086 2226 1.349026 CAAGCTGTCTCCTTCCCTCAA 59.651 52.381 0.00 0.00 0.00 3.02
2087 2227 0.979665 CAAGCTGTCTCCTTCCCTCA 59.020 55.000 0.00 0.00 0.00 3.86
2088 2228 0.980423 ACAAGCTGTCTCCTTCCCTC 59.020 55.000 0.00 0.00 0.00 4.30
2089 2229 1.349357 GAACAAGCTGTCTCCTTCCCT 59.651 52.381 0.00 0.00 0.00 4.20
2090 2230 1.072331 TGAACAAGCTGTCTCCTTCCC 59.928 52.381 0.00 0.00 0.00 3.97
2091 2231 2.550830 TGAACAAGCTGTCTCCTTCC 57.449 50.000 0.00 0.00 0.00 3.46
2092 2232 5.009010 TCAAAATGAACAAGCTGTCTCCTTC 59.991 40.000 0.00 0.00 0.00 3.46
2093 2233 4.889409 TCAAAATGAACAAGCTGTCTCCTT 59.111 37.500 0.00 0.00 0.00 3.36
2094 2234 4.464008 TCAAAATGAACAAGCTGTCTCCT 58.536 39.130 0.00 0.00 0.00 3.69
2095 2235 4.836125 TCAAAATGAACAAGCTGTCTCC 57.164 40.909 0.00 0.00 0.00 3.71
2096 2236 7.755591 TGATATCAAAATGAACAAGCTGTCTC 58.244 34.615 1.98 0.00 0.00 3.36
2097 2237 7.692460 TGATATCAAAATGAACAAGCTGTCT 57.308 32.000 1.98 0.00 0.00 3.41
2100 2240 9.622004 GGATATGATATCAAAATGAACAAGCTG 57.378 33.333 9.99 0.00 0.00 4.24
2101 2241 9.584008 AGGATATGATATCAAAATGAACAAGCT 57.416 29.630 9.99 0.00 0.00 3.74
2213 2365 5.775195 CCGACATCTATGGGCCTGATATATA 59.225 44.000 4.53 0.00 0.00 0.86
2261 2413 5.689383 ACATGTGTGACAGTTAAATGGTC 57.311 39.130 7.93 3.61 0.00 4.02
2265 2417 8.621532 ATCTACAACATGTGTGACAGTTAAAT 57.378 30.769 0.00 0.00 41.89 1.40
2305 2462 7.934665 CAGAGTAGTAGTGGTATGACAGAGTAT 59.065 40.741 0.00 0.00 0.00 2.12
2319 2476 9.745880 TTTTACAGAAAGAACAGAGTAGTAGTG 57.254 33.333 0.00 0.00 0.00 2.74
2383 2541 4.095483 GCTCTGTCCATTTCGTGATGAATT 59.905 41.667 2.99 0.00 36.22 2.17
2472 2664 7.575414 TGTACAAACACACACCTGATAATTT 57.425 32.000 0.00 0.00 0.00 1.82
2494 2861 8.567285 AACTAGTTAATTAATGAGCTTGCTGT 57.433 30.769 6.26 0.00 0.00 4.40
2509 2876 6.597832 AGCTGACTGACTGAACTAGTTAAT 57.402 37.500 8.42 0.00 40.53 1.40
2531 2898 4.074970 AGTAGGGTTGCAAGAATCAACAG 58.925 43.478 0.00 0.00 44.02 3.16
2618 2986 2.660552 CCGGCTGTTGTCGTCGTT 60.661 61.111 0.00 0.00 40.05 3.85
3290 3683 3.986996 ATTGCCCTCCCAAATTCTTTG 57.013 42.857 0.00 0.00 40.32 2.77
3293 3686 3.261643 GTCAAATTGCCCTCCCAAATTCT 59.738 43.478 0.00 0.00 0.00 2.40
3294 3687 3.007831 TGTCAAATTGCCCTCCCAAATTC 59.992 43.478 0.00 0.00 0.00 2.17
3295 3688 2.978278 TGTCAAATTGCCCTCCCAAATT 59.022 40.909 0.00 0.00 0.00 1.82
3296 3689 2.618794 TGTCAAATTGCCCTCCCAAAT 58.381 42.857 0.00 0.00 0.00 2.32
3356 3750 6.748132 AGACCACAACACTTATTTTGGAATG 58.252 36.000 0.00 0.00 0.00 2.67
3388 3782 8.767085 CCTAGTGTTGTCGTTTTAGTTCAAATA 58.233 33.333 0.00 0.00 0.00 1.40
3403 3797 2.897969 TCCCTCTGTTCCTAGTGTTGTC 59.102 50.000 0.00 0.00 0.00 3.18
3408 3802 6.042093 TGCTTATATTCCCTCTGTTCCTAGTG 59.958 42.308 0.00 0.00 0.00 2.74
3411 3805 7.347222 TCTTTGCTTATATTCCCTCTGTTCCTA 59.653 37.037 0.00 0.00 0.00 2.94
3418 3812 4.662650 AGGCTCTTTGCTTATATTCCCTCT 59.337 41.667 0.00 0.00 42.39 3.69
3431 3825 2.747855 CGGGTGGAGGCTCTTTGC 60.748 66.667 15.23 0.00 41.94 3.68
3445 3839 3.444703 TTTGATGGTTTGTTTGTCGGG 57.555 42.857 0.00 0.00 0.00 5.14
3452 3846 7.315066 ACATCCCTAAATTTGATGGTTTGTT 57.685 32.000 16.86 0.00 40.10 2.83
3460 3854 5.596772 CCCGGTTTACATCCCTAAATTTGAT 59.403 40.000 0.00 0.00 0.00 2.57
3468 3862 1.499368 GGACCCGGTTTACATCCCTA 58.501 55.000 0.00 0.00 0.00 3.53
3469 3863 1.276859 GGGACCCGGTTTACATCCCT 61.277 60.000 0.00 0.00 44.94 4.20
3470 3864 1.225426 GGGACCCGGTTTACATCCC 59.775 63.158 0.00 2.99 42.30 3.85
3471 3865 1.153309 CGGGACCCGGTTTACATCC 60.153 63.158 26.15 0.00 44.15 3.51
3472 3866 4.526770 CGGGACCCGGTTTACATC 57.473 61.111 26.15 0.00 44.15 3.06
3480 3874 9.947478 TATAAATGGACTTTAAACGGGACCCGG 62.947 44.444 35.36 19.31 40.87 5.73
3481 3875 6.377450 ATAAATGGACTTTAAACGGGACCCG 61.377 44.000 31.56 31.56 41.61 5.28
3482 3876 2.502142 ATGGACTTTAAACGGGACCC 57.498 50.000 0.00 0.00 0.00 4.46
3483 3877 7.628769 TTATAAATGGACTTTAAACGGGACC 57.371 36.000 0.00 0.00 33.15 4.46
3539 3933 9.733556 TGCTAGTTTGATAGTTTATTTTCCTCA 57.266 29.630 0.00 0.00 0.00 3.86
3555 3949 9.453325 CCGTTTAGTTAATTTTTGCTAGTTTGA 57.547 29.630 0.00 0.00 0.00 2.69
3556 3950 9.453325 TCCGTTTAGTTAATTTTTGCTAGTTTG 57.547 29.630 0.00 0.00 0.00 2.93
3561 3955 8.917655 GCAATTCCGTTTAGTTAATTTTTGCTA 58.082 29.630 0.00 0.00 33.63 3.49
3562 3956 7.358848 CGCAATTCCGTTTAGTTAATTTTTGCT 60.359 33.333 0.00 0.00 34.10 3.91
3563 3957 6.730177 CGCAATTCCGTTTAGTTAATTTTTGC 59.270 34.615 0.00 0.00 33.21 3.68
3564 3958 7.115095 TCCGCAATTCCGTTTAGTTAATTTTTG 59.885 33.333 0.00 0.00 0.00 2.44
3565 3959 7.115236 GTCCGCAATTCCGTTTAGTTAATTTTT 59.885 33.333 0.00 0.00 0.00 1.94
3566 3960 6.583427 GTCCGCAATTCCGTTTAGTTAATTTT 59.417 34.615 0.00 0.00 0.00 1.82
3567 3961 6.088173 GTCCGCAATTCCGTTTAGTTAATTT 58.912 36.000 0.00 0.00 0.00 1.82
3568 3962 5.633927 GTCCGCAATTCCGTTTAGTTAATT 58.366 37.500 0.00 0.00 0.00 1.40
3569 3963 4.201744 CGTCCGCAATTCCGTTTAGTTAAT 60.202 41.667 0.00 0.00 0.00 1.40
3570 3964 3.123284 CGTCCGCAATTCCGTTTAGTTAA 59.877 43.478 0.00 0.00 0.00 2.01
3571 3965 2.667481 CGTCCGCAATTCCGTTTAGTTA 59.333 45.455 0.00 0.00 0.00 2.24
3572 3966 1.461897 CGTCCGCAATTCCGTTTAGTT 59.538 47.619 0.00 0.00 0.00 2.24
3573 3967 1.073177 CGTCCGCAATTCCGTTTAGT 58.927 50.000 0.00 0.00 0.00 2.24
3574 3968 1.060122 GACGTCCGCAATTCCGTTTAG 59.940 52.381 3.51 0.00 33.03 1.85
3575 3969 1.070038 GACGTCCGCAATTCCGTTTA 58.930 50.000 3.51 0.00 33.03 2.01
3576 3970 0.881159 TGACGTCCGCAATTCCGTTT 60.881 50.000 14.12 0.00 33.03 3.60
3577 3971 0.672401 ATGACGTCCGCAATTCCGTT 60.672 50.000 14.12 0.00 33.03 4.44
3578 3972 0.672401 AATGACGTCCGCAATTCCGT 60.672 50.000 14.12 0.00 36.04 4.69
3579 3973 0.446222 AAATGACGTCCGCAATTCCG 59.554 50.000 14.12 0.00 0.00 4.30
3580 3974 3.963383 ATAAATGACGTCCGCAATTCC 57.037 42.857 14.12 0.00 0.00 3.01
3581 3975 4.027702 GCAAATAAATGACGTCCGCAATTC 60.028 41.667 14.12 0.00 0.00 2.17
3582 3976 3.857093 GCAAATAAATGACGTCCGCAATT 59.143 39.130 14.12 2.87 0.00 2.32
3583 3977 3.434637 GCAAATAAATGACGTCCGCAAT 58.565 40.909 14.12 0.00 0.00 3.56
3584 3978 2.414824 GGCAAATAAATGACGTCCGCAA 60.415 45.455 14.12 0.00 0.00 4.85
3585 3979 1.131504 GGCAAATAAATGACGTCCGCA 59.868 47.619 14.12 0.00 0.00 5.69
3586 3980 1.131504 TGGCAAATAAATGACGTCCGC 59.868 47.619 14.12 2.76 0.00 5.54
3587 3981 2.418628 AGTGGCAAATAAATGACGTCCG 59.581 45.455 14.12 0.00 0.00 4.79
3588 3982 4.434713 AAGTGGCAAATAAATGACGTCC 57.565 40.909 14.12 0.00 0.00 4.79
3589 3983 5.933790 TGTAAGTGGCAAATAAATGACGTC 58.066 37.500 9.11 9.11 0.00 4.34
3590 3984 5.950758 TGTAAGTGGCAAATAAATGACGT 57.049 34.783 0.00 0.00 0.00 4.34
3591 3985 5.971202 GGATGTAAGTGGCAAATAAATGACG 59.029 40.000 0.00 0.00 0.00 4.35
3592 3986 6.096846 AGGGATGTAAGTGGCAAATAAATGAC 59.903 38.462 0.00 0.00 0.00 3.06
3593 3987 6.194235 AGGGATGTAAGTGGCAAATAAATGA 58.806 36.000 0.00 0.00 0.00 2.57
3594 3988 6.469782 AGGGATGTAAGTGGCAAATAAATG 57.530 37.500 0.00 0.00 0.00 2.32
3595 3989 8.782137 ATTAGGGATGTAAGTGGCAAATAAAT 57.218 30.769 0.00 0.00 0.00 1.40
3596 3990 7.836685 TGATTAGGGATGTAAGTGGCAAATAAA 59.163 33.333 0.00 0.00 0.00 1.40
3597 3991 7.350382 TGATTAGGGATGTAAGTGGCAAATAA 58.650 34.615 0.00 0.00 0.00 1.40
3598 3992 6.905736 TGATTAGGGATGTAAGTGGCAAATA 58.094 36.000 0.00 0.00 0.00 1.40
3599 3993 5.765510 TGATTAGGGATGTAAGTGGCAAAT 58.234 37.500 0.00 0.00 0.00 2.32
3600 3994 5.186256 TGATTAGGGATGTAAGTGGCAAA 57.814 39.130 0.00 0.00 0.00 3.68
3601 3995 4.853468 TGATTAGGGATGTAAGTGGCAA 57.147 40.909 0.00 0.00 0.00 4.52
3602 3996 4.853468 TTGATTAGGGATGTAAGTGGCA 57.147 40.909 0.00 0.00 0.00 4.92
3603 3997 6.547510 AGAATTTGATTAGGGATGTAAGTGGC 59.452 38.462 0.00 0.00 0.00 5.01
3604 3998 8.525290 AAGAATTTGATTAGGGATGTAAGTGG 57.475 34.615 0.00 0.00 0.00 4.00
3605 3999 8.624776 GGAAGAATTTGATTAGGGATGTAAGTG 58.375 37.037 0.00 0.00 0.00 3.16
3606 4000 8.560903 AGGAAGAATTTGATTAGGGATGTAAGT 58.439 33.333 0.00 0.00 0.00 2.24
3607 4001 8.844244 CAGGAAGAATTTGATTAGGGATGTAAG 58.156 37.037 0.00 0.00 0.00 2.34
3608 4002 8.336235 ACAGGAAGAATTTGATTAGGGATGTAA 58.664 33.333 0.00 0.00 0.00 2.41
3609 4003 7.872138 ACAGGAAGAATTTGATTAGGGATGTA 58.128 34.615 0.00 0.00 0.00 2.29
3610 4004 6.735556 ACAGGAAGAATTTGATTAGGGATGT 58.264 36.000 0.00 0.00 0.00 3.06
3611 4005 7.123247 ACAACAGGAAGAATTTGATTAGGGATG 59.877 37.037 0.00 0.00 0.00 3.51
3612 4006 7.184862 ACAACAGGAAGAATTTGATTAGGGAT 58.815 34.615 0.00 0.00 0.00 3.85
3613 4007 6.552008 ACAACAGGAAGAATTTGATTAGGGA 58.448 36.000 0.00 0.00 0.00 4.20
3614 4008 6.434028 TGACAACAGGAAGAATTTGATTAGGG 59.566 38.462 0.00 0.00 0.00 3.53
3615 4009 7.452880 TGACAACAGGAAGAATTTGATTAGG 57.547 36.000 0.00 0.00 0.00 2.69
4119 4607 1.450312 CGGCCTCATCCTCAACCAC 60.450 63.158 0.00 0.00 0.00 4.16
4125 4613 4.959596 GAGCGCGGCCTCATCCTC 62.960 72.222 8.83 0.00 0.00 3.71
4146 4634 3.752796 GCTCAAGGCGTGGTACATA 57.247 52.632 0.00 0.00 44.52 2.29
4191 4679 0.611896 CTTTTCTGATGGGCGGGGTT 60.612 55.000 0.00 0.00 0.00 4.11
4230 4718 1.286354 GGACCAACATCGTCGCGAAA 61.286 55.000 12.06 1.68 39.99 3.46
4237 4725 2.742372 GCTGCGGACCAACATCGT 60.742 61.111 0.00 0.00 0.00 3.73
4251 4739 1.088340 CCATCAAGCTCGACCTGCTG 61.088 60.000 0.00 0.00 41.03 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.