Multiple sequence alignment - TraesCS3A01G065100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G065100 chr3A 100.000 4331 0 0 4097 8427 38394861 38390531 0.000000e+00 7998
1 TraesCS3A01G065100 chr3A 100.000 3760 0 0 1 3760 38398957 38395198 0.000000e+00 6944
2 TraesCS3A01G065100 chr3A 79.830 471 84 8 1703 2171 235810597 235811058 4.870000e-87 333
3 TraesCS3A01G065100 chr3B 90.243 3823 236 62 6 3760 49755347 49751594 0.000000e+00 4867
4 TraesCS3A01G065100 chr3B 93.452 2245 113 19 5352 7566 49750405 49748165 0.000000e+00 3301
5 TraesCS3A01G065100 chr3B 97.841 1158 23 1 4097 5252 49751557 49750400 0.000000e+00 1999
6 TraesCS3A01G065100 chr3B 82.234 394 43 13 8002 8384 49748166 49747789 1.770000e-81 315
7 TraesCS3A01G065100 chr3B 90.654 107 10 0 7482 7588 49678067 49677961 8.820000e-30 143
8 TraesCS3A01G065100 chr3D 90.390 3819 197 56 1 3760 29172939 29169232 0.000000e+00 4863
9 TraesCS3A01G065100 chr3D 97.282 2244 54 4 5352 7588 29167726 29165483 0.000000e+00 3799
10 TraesCS3A01G065100 chr3D 98.014 1158 21 1 4097 5252 29168878 29167721 0.000000e+00 2010
11 TraesCS3A01G065100 chr3D 92.100 519 37 3 1 516 29184719 29184202 0.000000e+00 728
12 TraesCS3A01G065100 chr3D 91.715 519 39 3 1 516 29174028 29173511 0.000000e+00 717
13 TraesCS3A01G065100 chr3D 91.715 519 39 3 1 516 29200428 29199911 0.000000e+00 717
14 TraesCS3A01G065100 chr3D 91.715 519 39 3 1 516 29203693 29203176 0.000000e+00 717
15 TraesCS3A01G065100 chr3D 91.522 519 40 3 1 516 29198249 29197732 0.000000e+00 712
16 TraesCS3A01G065100 chr3D 91.522 519 40 3 1 516 29202604 29202087 0.000000e+00 712
17 TraesCS3A01G065100 chr3D 91.522 519 39 4 1 516 29197154 29196638 0.000000e+00 710
18 TraesCS3A01G065100 chr3D 91.329 519 41 3 1 516 29189476 29188959 0.000000e+00 706
19 TraesCS3A01G065100 chr3D 91.329 519 41 3 1 516 29190569 29190052 0.000000e+00 706
20 TraesCS3A01G065100 chr3D 91.137 519 42 3 1 516 29175117 29174600 0.000000e+00 701
21 TraesCS3A01G065100 chr3D 89.157 166 14 3 5631 5793 288550458 288550622 3.990000e-48 204
22 TraesCS3A01G065100 chr3D 95.238 126 5 1 5239 5364 442525152 442525276 1.860000e-46 198
23 TraesCS3A01G065100 chr2D 92.494 413 20 7 7584 7985 640367720 640367308 1.580000e-161 580
24 TraesCS3A01G065100 chr2D 89.977 439 28 10 7566 7989 10487869 10488306 3.440000e-153 553
25 TraesCS3A01G065100 chr2D 89.977 439 28 10 7566 7989 10504990 10505427 3.440000e-153 553
26 TraesCS3A01G065100 chr2D 89.245 437 33 9 7566 7989 10229059 10228624 1.250000e-147 534
27 TraesCS3A01G065100 chr7D 92.176 409 22 6 7584 7982 589511200 589510792 3.410000e-158 569
28 TraesCS3A01G065100 chr7D 90.654 428 24 11 7574 7988 551810167 551809743 9.560000e-154 555
29 TraesCS3A01G065100 chr7D 91.503 153 11 1 5631 5781 34756866 34757018 8.570000e-50 209
30 TraesCS3A01G065100 chr1A 91.587 416 25 6 7580 7986 45858881 45858467 4.420000e-157 566
31 TraesCS3A01G065100 chr6A 92.040 402 27 4 7584 7981 563381810 563382210 2.050000e-155 560
32 TraesCS3A01G065100 chr6A 92.308 156 10 1 5631 5784 411770405 411770250 3.960000e-53 220
33 TraesCS3A01G065100 chr2A 91.505 412 24 6 7584 7984 724728542 724728953 2.660000e-154 556
34 TraesCS3A01G065100 chr2A 90.968 155 12 1 5631 5783 141506318 141506472 3.080000e-49 207
35 TraesCS3A01G065100 chr2A 96.639 119 2 1 5248 5366 677737879 677737763 6.670000e-46 196
36 TraesCS3A01G065100 chr6B 90.506 158 12 2 5628 5782 617176578 617176735 1.110000e-48 206
37 TraesCS3A01G065100 chr6B 99.091 110 1 0 5245 5354 130967933 130967824 1.860000e-46 198
38 TraesCS3A01G065100 chr6B 97.391 115 3 0 5240 5354 156651554 156651440 6.670000e-46 196
39 TraesCS3A01G065100 chr6B 86.364 154 11 3 864 1009 2207857 2208008 8.760000e-35 159
40 TraesCS3A01G065100 chr5B 90.000 160 14 1 5624 5781 299602216 299602375 1.110000e-48 206
41 TraesCS3A01G065100 chr2B 88.485 165 17 1 5621 5783 190022881 190023045 1.860000e-46 198
42 TraesCS3A01G065100 chr2B 97.391 115 2 1 5245 5358 253633720 253633606 2.400000e-45 195
43 TraesCS3A01G065100 chr4B 99.083 109 1 0 5246 5354 57864964 57864856 6.670000e-46 196
44 TraesCS3A01G065100 chr1B 98.214 112 2 0 5243 5354 5934818 5934929 6.670000e-46 196
45 TraesCS3A01G065100 chr7B 94.444 126 5 2 5244 5368 732134692 732134568 8.630000e-45 193
46 TraesCS3A01G065100 chrUn 95.798 119 4 1 5248 5366 15981933 15981816 3.100000e-44 191


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G065100 chr3A 38390531 38398957 8426 True 7471.0 7998 100.0000 1 8427 2 chr3A.!!$R1 8426
1 TraesCS3A01G065100 chr3B 49747789 49755347 7558 True 2620.5 4867 90.9425 6 8384 4 chr3B.!!$R2 8378
2 TraesCS3A01G065100 chr3D 29165483 29175117 9634 True 2418.0 4863 93.7076 1 7588 5 chr3D.!!$R2 7587
3 TraesCS3A01G065100 chr3D 29184202 29184719 517 True 728.0 728 92.1000 1 516 1 chr3D.!!$R1 515
4 TraesCS3A01G065100 chr3D 29196638 29203693 7055 True 713.6 717 91.5992 1 516 5 chr3D.!!$R4 515
5 TraesCS3A01G065100 chr3D 29188959 29190569 1610 True 706.0 706 91.3290 1 516 2 chr3D.!!$R3 515

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
438 8068 0.468226 TCCAACAGCTCAAGGTCGTT 59.532 50.000 0.00 0.00 0.00 3.85 F
1358 11195 0.370958 CGTCGTTGTGGTTCGTTTGT 59.629 50.000 0.00 0.00 0.00 2.83 F
2361 12229 0.961753 CTTCCTTGGTTTGGTGGCTC 59.038 55.000 0.00 0.00 0.00 4.70 F
2505 12373 1.390287 TGTAGTGGGGACTAGGGACT 58.610 55.000 0.00 0.00 46.37 3.85 F
2552 12420 1.931172 AGTGGAAGTCAAACAACGTCG 59.069 47.619 0.00 0.00 0.00 5.12 F
3583 13470 1.975407 GTTGCTGTCCAGGCATGCT 60.975 57.895 18.92 0.11 39.54 3.79 F
5263 15169 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55 F
5264 15170 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30 F
7096 17024 0.259065 TGATAGGAGTCGACCAGGCT 59.741 55.000 13.01 0.00 37.62 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1588 11437 0.388907 AACCATGAACATTGCAGCGC 60.389 50.000 0.00 0.00 0.00 5.92 R
2974 12861 0.182775 GGCCCACCTGATCGGTATTT 59.817 55.000 8.59 0.00 46.94 1.40 R
3592 13479 0.478072 TGGAGCTGGGAGCAGAAAAA 59.522 50.000 0.00 0.00 45.56 1.94 R
3677 13564 2.475155 TCATGGAGAGAGTGCCAGAAT 58.525 47.619 0.00 0.00 37.64 2.40 R
4237 14143 4.339247 CCAACATGGCTTTTAGTCCATAGG 59.661 45.833 0.00 0.00 40.88 2.57 R
5336 15242 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30 R
7096 17024 1.069668 CTGACCATCTCATCGATGCCA 59.930 52.381 20.81 9.44 46.61 4.92 R
7150 17078 2.659016 CAGAGGCGCTCCTTGACA 59.341 61.111 7.64 0.00 44.46 3.58 R
7943 17881 0.181350 CCGAGCTCCATAAAGGCCTT 59.819 55.000 13.78 13.78 37.29 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 2.171237 TCGTCCATGCCTCTTCATCATT 59.829 45.455 0.00 0.00 0.00 2.57
127 1217 1.961277 CACACCTTGTGGCTCCGAC 60.961 63.158 0.00 0.00 44.27 4.79
128 1218 2.358737 CACCTTGTGGCTCCGACC 60.359 66.667 0.00 0.00 36.63 4.79
139 1229 0.810016 GCTCCGACCGACTACTTCTT 59.190 55.000 0.00 0.00 0.00 2.52
141 1231 1.811359 CTCCGACCGACTACTTCTTGT 59.189 52.381 0.00 0.00 0.00 3.16
151 1241 5.176958 CCGACTACTTCTTGTTTCGTCAAAT 59.823 40.000 0.00 0.00 33.65 2.32
166 1256 3.930848 CGTCAAATACGTTTCCCTAGCTT 59.069 43.478 0.00 0.00 46.72 3.74
179 1269 3.516300 TCCCTAGCTTCGTTGGTATTTCA 59.484 43.478 0.00 0.00 0.00 2.69
184 1274 2.678336 GCTTCGTTGGTATTTCAGAGGG 59.322 50.000 0.00 0.00 0.00 4.30
205 1295 1.153289 AGATGCGGCATCGAGCTTT 60.153 52.632 30.88 14.48 44.67 3.51
209 1299 1.210155 GCGGCATCGAGCTTTGTTT 59.790 52.632 0.00 0.00 44.79 2.83
217 1307 4.669197 GCATCGAGCTTTGTTTACGACATT 60.669 41.667 0.00 0.00 38.03 2.71
302 4657 3.818210 TGACTTTGACATACGGCATTTGT 59.182 39.130 0.00 0.00 0.00 2.83
367 5809 4.444306 GGGAGTGCATATACTTTAGGTGCA 60.444 45.833 0.00 0.00 42.86 4.57
377 6912 2.556622 ACTTTAGGTGCATGGAAAACCG 59.443 45.455 0.00 0.00 39.07 4.44
405 8035 2.016318 TCGGCCACATTCAATCATGTC 58.984 47.619 2.24 0.00 35.03 3.06
438 8068 0.468226 TCCAACAGCTCAAGGTCGTT 59.532 50.000 0.00 0.00 0.00 3.85
454 9178 1.702957 TCGTTTTCCTCCTCCCACAAT 59.297 47.619 0.00 0.00 0.00 2.71
458 9182 4.558697 CGTTTTCCTCCTCCCACAATTTTC 60.559 45.833 0.00 0.00 0.00 2.29
490 10296 0.615331 TCCAATCCAGCAGTCCTCAC 59.385 55.000 0.00 0.00 0.00 3.51
519 10326 0.822164 TCTAACCCAGCTCTAACCGC 59.178 55.000 0.00 0.00 0.00 5.68
520 10327 0.535335 CTAACCCAGCTCTAACCGCA 59.465 55.000 0.00 0.00 0.00 5.69
539 10346 4.394712 GCCTCCACCACTCACGGG 62.395 72.222 0.00 0.00 0.00 5.28
543 10350 3.000819 CCACCACTCACGGGCCTA 61.001 66.667 0.84 0.00 0.00 3.93
547 10354 0.907704 ACCACTCACGGGCCTAATCA 60.908 55.000 0.84 0.00 0.00 2.57
550 10357 1.146263 CTCACGGGCCTAATCACCC 59.854 63.158 0.84 0.00 43.25 4.61
553 10360 2.772622 CGGGCCTAATCACCCCCT 60.773 66.667 0.84 0.00 43.86 4.79
561 10372 1.542093 TAATCACCCCCTCCCCCTCA 61.542 60.000 0.00 0.00 0.00 3.86
606 10417 1.071385 CTAAGCCCCGCTCTGATGAAT 59.929 52.381 0.00 0.00 38.25 2.57
663 10474 1.640917 TAAGTTTGGGACTCGCTCCT 58.359 50.000 0.00 0.00 37.72 3.69
699 10510 4.111016 CCGCTCGTACACGGCTCA 62.111 66.667 6.09 0.00 43.44 4.26
743 10567 1.260538 ATGTCCTCTTCAGCCTCGCA 61.261 55.000 0.00 0.00 0.00 5.10
748 10572 3.123620 CTTCAGCCTCGCACTGCC 61.124 66.667 0.00 0.00 35.04 4.85
795 10620 5.689514 CACAAAAATTTTCAGGCACGTGATA 59.310 36.000 22.23 0.00 0.00 2.15
832 10657 8.909671 CGTTAGTTAAAACGTCTCATAAGTTCT 58.090 33.333 4.60 0.00 45.46 3.01
848 10673 9.577110 TCATAAGTTCTGAACGAATAATTACGT 57.423 29.630 14.35 0.00 44.57 3.57
854 10679 6.849502 TCTGAACGAATAATTACGTGAGAGT 58.150 36.000 0.00 0.00 42.43 3.24
862 10687 3.666345 ATTACGTGAGAGTAGAGGGGT 57.334 47.619 0.00 0.00 0.00 4.95
875 10700 4.533311 AGTAGAGGGGTTTTTCCGTGAATA 59.467 41.667 0.00 0.00 37.00 1.75
955 10788 1.689813 CCAAGTTACCAAACCCCCAAC 59.310 52.381 0.00 0.00 36.15 3.77
1115 10949 4.159108 CGGGTAGGAGCCCCCTCT 62.159 72.222 0.00 0.00 43.31 3.69
1116 10950 2.122769 GGGTAGGAGCCCCCTCTC 60.123 72.222 0.00 0.00 43.31 3.20
1168 11003 2.584143 CCCTAACCCTAACGCGCG 60.584 66.667 30.96 30.96 0.00 6.86
1169 11004 2.182537 CCTAACCCTAACGCGCGT 59.817 61.111 32.73 32.73 0.00 6.01
1171 11006 1.138247 CTAACCCTAACGCGCGTCT 59.862 57.895 37.77 26.47 0.00 4.18
1172 11007 0.864797 CTAACCCTAACGCGCGTCTC 60.865 60.000 37.77 0.00 0.00 3.36
1173 11008 2.270297 TAACCCTAACGCGCGTCTCC 62.270 60.000 37.77 0.00 0.00 3.71
1174 11009 3.823330 CCCTAACGCGCGTCTCCT 61.823 66.667 37.77 23.28 0.00 3.69
1191 11026 1.370414 CTTGGTTTGCTCCGTTGCG 60.370 57.895 0.00 0.00 35.36 4.85
1251 11086 1.090052 GTAACATCGTGCAGAGGCCC 61.090 60.000 0.00 0.00 40.13 5.80
1274 11109 2.507102 CCGCAGCTCAGGTACGTG 60.507 66.667 9.30 9.30 0.00 4.49
1300 11137 1.854227 GGGACGCTTAGAAATCTCGG 58.146 55.000 0.00 0.00 0.00 4.63
1302 11139 1.209998 GACGCTTAGAAATCTCGGCC 58.790 55.000 0.00 0.00 0.00 6.13
1307 11144 2.739379 GCTTAGAAATCTCGGCCTATGC 59.261 50.000 0.00 0.00 0.00 3.14
1338 11175 2.767566 GCGAATGCGTTTGGATTTTG 57.232 45.000 8.01 0.00 36.14 2.44
1358 11195 0.370958 CGTCGTTGTGGTTCGTTTGT 59.629 50.000 0.00 0.00 0.00 2.83
1387 11224 1.344942 CTCGCGGGTTCAGAAGTTCG 61.345 60.000 6.13 0.00 0.00 3.95
1473 11310 6.238648 CGAAATTGGGCGTATCCTTTTAGATT 60.239 38.462 0.00 0.00 34.39 2.40
1474 11311 6.391227 AATTGGGCGTATCCTTTTAGATTG 57.609 37.500 0.00 0.00 34.39 2.67
1475 11312 4.764050 TGGGCGTATCCTTTTAGATTGA 57.236 40.909 0.00 0.00 34.39 2.57
1577 11426 9.499585 CAGATGTCTGTAGAAATATTTTTGCAG 57.500 33.333 22.77 22.77 39.09 4.41
1639 11488 6.862209 TGTACAAAATGGGCATCACTTTATC 58.138 36.000 0.00 0.00 0.00 1.75
1678 11544 3.190874 GACTTGTAAGAGGATTGGAGCG 58.809 50.000 0.00 0.00 0.00 5.03
1833 11699 5.917447 CGATGATGATGTCGTCTATCAGTTT 59.083 40.000 4.08 0.00 40.13 2.66
1949 11815 8.415950 TTTTAGGCTTCAAATGGATAAACTGA 57.584 30.769 0.00 0.00 0.00 3.41
1991 11857 2.439507 TCCTTTCTCCAGAGTGCACTTT 59.560 45.455 22.65 13.35 0.00 2.66
2011 11878 9.179552 GCACTTTTAATTTTTGCATTTTTAGGG 57.820 29.630 0.00 0.00 33.24 3.53
2015 11882 9.905171 TTTTAATTTTTGCATTTTTAGGGATGC 57.095 25.926 1.60 1.60 46.73 3.91
2127 11994 7.169158 TCAATGCTTAAGGGAAAATTCGATT 57.831 32.000 4.29 0.00 0.00 3.34
2138 12005 4.314961 GAAAATTCGATTTGTGCCCCTTT 58.685 39.130 0.00 0.00 31.77 3.11
2361 12229 0.961753 CTTCCTTGGTTTGGTGGCTC 59.038 55.000 0.00 0.00 0.00 4.70
2396 12264 9.774742 CTTTGCACCTGATAAATAAGTAACTTC 57.225 33.333 0.00 0.00 0.00 3.01
2427 12295 8.622948 AGTTAGTCCTGTTGAATAAGAAAAGG 57.377 34.615 0.00 0.00 34.44 3.11
2485 12353 8.370266 ACAATTCCAGTTACCAGTGTAGTATA 57.630 34.615 0.00 0.00 0.00 1.47
2504 12372 2.473576 ATGTAGTGGGGACTAGGGAC 57.526 55.000 0.00 0.00 0.00 4.46
2505 12373 1.390287 TGTAGTGGGGACTAGGGACT 58.610 55.000 0.00 0.00 46.37 3.85
2506 12374 2.576841 TGTAGTGGGGACTAGGGACTA 58.423 52.381 0.00 0.00 41.75 2.59
2552 12420 1.931172 AGTGGAAGTCAAACAACGTCG 59.069 47.619 0.00 0.00 0.00 5.12
2571 12439 2.307686 TCGTAAGGGCTTTGGGAAAGAT 59.692 45.455 0.16 0.00 38.28 2.40
2581 12449 5.355630 GGCTTTGGGAAAGATCTTTAGTCTC 59.644 44.000 20.51 9.45 41.02 3.36
2588 12456 5.351948 AAAGATCTTTAGTCTCAGCCTCC 57.648 43.478 19.17 0.00 0.00 4.30
2613 12481 4.217118 AGCATAAGCAAGGTGAACAGAAAG 59.783 41.667 0.00 0.00 45.49 2.62
2620 12488 4.496507 GCAAGGTGAACAGAAAGAGTGAAC 60.497 45.833 0.00 0.00 0.00 3.18
2636 12504 6.006449 AGAGTGAACTATGCAACTCCATTTT 58.994 36.000 9.76 0.00 0.00 1.82
2637 12505 6.150140 AGAGTGAACTATGCAACTCCATTTTC 59.850 38.462 9.76 0.00 0.00 2.29
2638 12506 6.006449 AGTGAACTATGCAACTCCATTTTCT 58.994 36.000 0.00 0.00 0.00 2.52
2640 12508 4.708726 ACTATGCAACTCCATTTTCTGC 57.291 40.909 0.00 0.00 0.00 4.26
2738 12613 2.236766 TGGTATTCCGGAGCTAGTAGC 58.763 52.381 14.62 14.62 37.84 3.58
2787 12672 4.357918 AAGTGAGCCTACACATCAGTTT 57.642 40.909 0.00 0.00 42.45 2.66
2798 12683 7.043325 GCCTACACATCAGTTTATTTAGTCTCG 60.043 40.741 0.00 0.00 0.00 4.04
2799 12684 6.648725 ACACATCAGTTTATTTAGTCTCGC 57.351 37.500 0.00 0.00 0.00 5.03
2877 12762 9.131791 ACATGTATCTTTAAACTTCACCAACTT 57.868 29.630 0.00 0.00 0.00 2.66
2878 12763 9.965824 CATGTATCTTTAAACTTCACCAACTTT 57.034 29.630 0.00 0.00 0.00 2.66
2879 12764 9.965824 ATGTATCTTTAAACTTCACCAACTTTG 57.034 29.630 0.00 0.00 0.00 2.77
2914 12799 9.801873 CCTATAAACAATTATTTCACAACCCAG 57.198 33.333 0.00 0.00 33.75 4.45
2915 12800 9.801873 CTATAAACAATTATTTCACAACCCAGG 57.198 33.333 0.00 0.00 33.75 4.45
3111 12998 7.323656 CGTTGGTAATGTCTTTTGTGATCTTTC 59.676 37.037 0.00 0.00 0.00 2.62
3137 13024 8.165239 TGTGCTTTTGTTATGACTTATGAACT 57.835 30.769 0.00 0.00 0.00 3.01
3244 13131 8.774586 GCTTTTGGTATCGATGATGTATTTAGT 58.225 33.333 8.54 0.00 0.00 2.24
3274 13161 3.005155 ACAATCAGAAGCTTGGAAACTGC 59.995 43.478 2.10 0.00 0.00 4.40
3391 13278 7.446001 TGTGCAACATACAAGTCATTTCATA 57.554 32.000 0.00 0.00 45.67 2.15
3462 13349 4.848357 AGGAGGAAATACCATTGACTGTG 58.152 43.478 0.00 0.00 42.04 3.66
3505 13392 9.408648 CTAACTGGATAAACAGGGACATTTTAT 57.591 33.333 0.00 0.00 42.75 1.40
3583 13470 1.975407 GTTGCTGTCCAGGCATGCT 60.975 57.895 18.92 0.11 39.54 3.79
3592 13479 2.285969 AGGCATGCTCTGTCCCCT 60.286 61.111 18.92 0.00 0.00 4.79
3677 13564 6.818644 GTGGAGAGCTTGAGTGAACAATATTA 59.181 38.462 0.00 0.00 0.00 0.98
3704 13591 2.699846 GCACTCTCTCCATGAGGATCTT 59.300 50.000 0.00 0.00 44.70 2.40
4447 14353 7.416964 TGTTTTCCCTAATCCATACCATTTG 57.583 36.000 0.00 0.00 0.00 2.32
4462 14368 7.066887 CCATACCATTTGCATGTCTAACAGTAA 59.933 37.037 0.00 0.00 0.00 2.24
4615 14521 6.959671 TTCTTTGTTCGCTTGTCAATTTTT 57.040 29.167 0.00 0.00 0.00 1.94
5248 15154 6.095021 AGCTATCGTCTGTGACTTGTTATGTA 59.905 38.462 0.00 0.00 0.00 2.29
5249 15155 6.196724 GCTATCGTCTGTGACTTGTTATGTAC 59.803 42.308 0.00 0.00 0.00 2.90
5250 15156 5.700722 TCGTCTGTGACTTGTTATGTACT 57.299 39.130 0.00 0.00 0.00 2.73
5251 15157 5.696822 TCGTCTGTGACTTGTTATGTACTC 58.303 41.667 0.00 0.00 0.00 2.59
5252 15158 4.857588 CGTCTGTGACTTGTTATGTACTCC 59.142 45.833 0.00 0.00 0.00 3.85
5253 15159 5.169295 GTCTGTGACTTGTTATGTACTCCC 58.831 45.833 0.00 0.00 0.00 4.30
5254 15160 5.047235 GTCTGTGACTTGTTATGTACTCCCT 60.047 44.000 0.00 0.00 0.00 4.20
5255 15161 5.185249 TCTGTGACTTGTTATGTACTCCCTC 59.815 44.000 0.00 0.00 0.00 4.30
5256 15162 4.222145 TGTGACTTGTTATGTACTCCCTCC 59.778 45.833 0.00 0.00 0.00 4.30
5257 15163 3.446161 TGACTTGTTATGTACTCCCTCCG 59.554 47.826 0.00 0.00 0.00 4.63
5258 15164 3.438183 ACTTGTTATGTACTCCCTCCGT 58.562 45.455 0.00 0.00 0.00 4.69
5259 15165 3.836562 ACTTGTTATGTACTCCCTCCGTT 59.163 43.478 0.00 0.00 0.00 4.44
5260 15166 4.081807 ACTTGTTATGTACTCCCTCCGTTC 60.082 45.833 0.00 0.00 0.00 3.95
5261 15167 2.424601 TGTTATGTACTCCCTCCGTTCG 59.575 50.000 0.00 0.00 0.00 3.95
5262 15168 1.683943 TATGTACTCCCTCCGTTCGG 58.316 55.000 4.74 4.74 0.00 4.30
5263 15169 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
5264 15170 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
5265 15171 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
5266 15172 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
5267 15173 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5268 15174 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5269 15175 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5270 15176 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5271 15177 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5272 15178 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5273 15179 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5274 15180 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
5275 15181 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
5276 15182 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
5277 15183 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
5278 15184 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
5279 15185 4.383649 CGTTCGGAATTACTTGTCTCGAAA 59.616 41.667 0.00 0.00 37.00 3.46
5280 15186 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
5281 15187 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
5282 15188 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
5283 15189 5.350365 TCGGAATTACTTGTCTCGAAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
5284 15190 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
5285 15191 6.037172 CGGAATTACTTGTCTCGAAAATGGAT 59.963 38.462 0.00 0.00 0.00 3.41
5286 15192 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
5287 15193 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
5288 15194 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
5289 15195 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
5290 15196 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
5291 15197 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
5292 15198 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
5293 15199 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
5294 15200 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
5295 15201 8.183104 TGTCTCGAAAATGGATGTATCTAGAT 57.817 34.615 10.73 10.73 0.00 1.98
5296 15202 8.084684 TGTCTCGAAAATGGATGTATCTAGATG 58.915 37.037 15.79 0.00 0.00 2.90
5297 15203 8.085296 GTCTCGAAAATGGATGTATCTAGATGT 58.915 37.037 15.79 1.25 0.00 3.06
5298 15204 9.297037 TCTCGAAAATGGATGTATCTAGATGTA 57.703 33.333 15.79 4.44 0.00 2.29
5325 15231 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
5326 15232 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
5327 15233 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
5328 15234 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
5329 15235 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
5330 15236 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
5331 15237 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
5332 15238 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
5333 15239 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
5334 15240 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
5335 15241 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
5336 15242 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
5337 15243 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
5338 15244 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
5339 15245 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
5340 15246 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
5341 15247 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
5342 15248 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
5343 15249 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
5344 15250 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
5345 15251 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
5346 15252 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
5347 15253 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
5348 15254 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5349 15255 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5350 15256 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5351 15257 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5352 15258 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5462 15368 1.417517 TGCTCTGTGTCTGTGTTCCAT 59.582 47.619 0.00 0.00 0.00 3.41
5481 15387 6.271488 TCCATTTTTGCTCTTATCCAGTTG 57.729 37.500 0.00 0.00 0.00 3.16
5577 15483 0.700564 AGGCAGCATTGAGGGAGAAA 59.299 50.000 0.00 0.00 0.00 2.52
5859 15767 9.969001 AATAGTTACTACCTTAAAGCCATTTGA 57.031 29.630 0.00 0.00 0.00 2.69
5860 15768 7.683437 AGTTACTACCTTAAAGCCATTTGAC 57.317 36.000 0.00 0.00 0.00 3.18
5861 15769 7.459234 AGTTACTACCTTAAAGCCATTTGACT 58.541 34.615 0.00 0.00 0.00 3.41
5862 15770 7.606839 AGTTACTACCTTAAAGCCATTTGACTC 59.393 37.037 0.00 0.00 0.00 3.36
6109 16030 5.598005 TGAGTGGAACCATGTCATTTTTCTT 59.402 36.000 0.00 0.00 37.80 2.52
6138 16059 1.141053 CTCCCCCTAGCAACCACATAC 59.859 57.143 0.00 0.00 0.00 2.39
6152 16073 1.134995 CACATACCGCTGAGCTCAGAA 60.135 52.381 41.20 24.66 46.59 3.02
6392 16320 3.880047 TCTACAACCTGGTTGATACGG 57.120 47.619 38.49 23.36 45.28 4.02
6502 16430 6.890293 GGAGAACCCAGAGTTATACTTTGAT 58.110 40.000 0.00 0.00 39.40 2.57
6766 16694 5.472820 GGAAGATGATGATGGGAAAGATGAC 59.527 44.000 0.00 0.00 0.00 3.06
6778 16706 5.118990 GGGAAAGATGACGATGAATCAGAA 58.881 41.667 0.00 0.00 0.00 3.02
6812 16740 3.443681 CGCATCAAAAATCCAGGTAAGGT 59.556 43.478 0.00 0.00 0.00 3.50
6822 16750 1.273324 CCAGGTAAGGTCCCACTCTCT 60.273 57.143 0.00 0.00 0.00 3.10
6823 16751 2.024273 CCAGGTAAGGTCCCACTCTCTA 60.024 54.545 0.00 0.00 0.00 2.43
6832 16760 2.429250 GTCCCACTCTCTAGCTTTCCTC 59.571 54.545 0.00 0.00 0.00 3.71
6857 16785 9.636789 TCTTCATGATGTCCATTTTCTCATATT 57.363 29.630 8.33 0.00 31.94 1.28
6937 16865 4.394712 CCCGTGCAGGAGGTGGAC 62.395 72.222 8.24 0.00 45.00 4.02
7096 17024 0.259065 TGATAGGAGTCGACCAGGCT 59.741 55.000 13.01 0.00 37.62 4.58
7150 17078 0.394625 GGCTACTGGAGGACGAGTCT 60.395 60.000 3.09 0.00 36.53 3.24
7470 17400 4.040376 CGCTAACGTATAGGGAAACTGAC 58.960 47.826 13.01 0.00 33.53 3.51
7510 17448 6.681777 ACAGAAGTATTTTTGCTTGTGATCC 58.318 36.000 7.70 0.00 37.96 3.36
7596 17534 9.700831 ATTGTTTATTAGAGAGTAGGGCATTTT 57.299 29.630 0.00 0.00 0.00 1.82
7597 17535 8.506168 TGTTTATTAGAGAGTAGGGCATTTTG 57.494 34.615 0.00 0.00 0.00 2.44
7598 17536 8.325787 TGTTTATTAGAGAGTAGGGCATTTTGA 58.674 33.333 0.00 0.00 0.00 2.69
7599 17537 9.174166 GTTTATTAGAGAGTAGGGCATTTTGAA 57.826 33.333 0.00 0.00 0.00 2.69
7600 17538 8.964476 TTATTAGAGAGTAGGGCATTTTGAAG 57.036 34.615 0.00 0.00 0.00 3.02
7601 17539 6.620877 TTAGAGAGTAGGGCATTTTGAAGA 57.379 37.500 0.00 0.00 0.00 2.87
7602 17540 4.837972 AGAGAGTAGGGCATTTTGAAGAC 58.162 43.478 0.00 0.00 0.00 3.01
7603 17541 3.942115 GAGAGTAGGGCATTTTGAAGACC 59.058 47.826 0.00 0.00 0.00 3.85
7604 17542 2.678336 GAGTAGGGCATTTTGAAGACCG 59.322 50.000 0.00 0.00 0.00 4.79
7605 17543 2.304761 AGTAGGGCATTTTGAAGACCGA 59.695 45.455 0.00 0.00 0.00 4.69
7606 17544 1.826385 AGGGCATTTTGAAGACCGAG 58.174 50.000 0.00 0.00 0.00 4.63
7607 17545 0.171231 GGGCATTTTGAAGACCGAGC 59.829 55.000 0.00 0.00 0.00 5.03
7608 17546 1.168714 GGCATTTTGAAGACCGAGCT 58.831 50.000 0.00 0.00 0.00 4.09
7609 17547 1.131315 GGCATTTTGAAGACCGAGCTC 59.869 52.381 2.73 2.73 0.00 4.09
7610 17548 1.131315 GCATTTTGAAGACCGAGCTCC 59.869 52.381 8.47 0.00 0.00 4.70
7611 17549 2.426522 CATTTTGAAGACCGAGCTCCA 58.573 47.619 8.47 0.00 0.00 3.86
7612 17550 2.859165 TTTTGAAGACCGAGCTCCAT 57.141 45.000 8.47 0.00 0.00 3.41
7613 17551 2.099141 TTTGAAGACCGAGCTCCATG 57.901 50.000 8.47 0.00 0.00 3.66
7614 17552 0.250234 TTGAAGACCGAGCTCCATGG 59.750 55.000 4.97 4.97 0.00 3.66
7615 17553 0.614697 TGAAGACCGAGCTCCATGGA 60.615 55.000 15.27 15.27 0.00 3.41
7616 17554 0.103937 GAAGACCGAGCTCCATGGAG 59.896 60.000 33.73 33.73 44.56 3.86
7628 17566 4.660789 CTCCATGGAGCCCTTTATTTTG 57.339 45.455 28.45 1.40 35.31 2.44
7629 17567 4.280819 CTCCATGGAGCCCTTTATTTTGA 58.719 43.478 28.45 0.00 35.31 2.69
7630 17568 4.682563 TCCATGGAGCCCTTTATTTTGAA 58.317 39.130 11.44 0.00 0.00 2.69
7631 17569 5.090139 TCCATGGAGCCCTTTATTTTGAAA 58.910 37.500 11.44 0.00 0.00 2.69
7632 17570 5.545723 TCCATGGAGCCCTTTATTTTGAAAA 59.454 36.000 11.44 0.00 0.00 2.29
7633 17571 6.043706 TCCATGGAGCCCTTTATTTTGAAAAA 59.956 34.615 11.44 0.00 0.00 1.94
7634 17572 6.885918 CCATGGAGCCCTTTATTTTGAAAAAT 59.114 34.615 5.56 6.29 41.24 1.82
7635 17573 7.394077 CCATGGAGCCCTTTATTTTGAAAAATT 59.606 33.333 5.56 0.00 39.24 1.82
7636 17574 7.977789 TGGAGCCCTTTATTTTGAAAAATTC 57.022 32.000 6.34 0.00 39.24 2.17
7637 17575 7.512992 TGGAGCCCTTTATTTTGAAAAATTCA 58.487 30.769 6.34 0.00 39.24 2.57
7695 17633 7.643569 AAAATACACATGTATGCAAGGATGA 57.356 32.000 0.00 0.00 40.78 2.92
7696 17634 7.643569 AAATACACATGTATGCAAGGATGAA 57.356 32.000 0.00 0.00 40.78 2.57
7697 17635 7.643569 AATACACATGTATGCAAGGATGAAA 57.356 32.000 0.00 0.00 40.78 2.69
7698 17636 5.571784 ACACATGTATGCAAGGATGAAAG 57.428 39.130 0.00 2.60 0.00 2.62
7699 17637 5.012239 ACACATGTATGCAAGGATGAAAGT 58.988 37.500 0.00 3.07 0.00 2.66
7700 17638 5.106038 ACACATGTATGCAAGGATGAAAGTG 60.106 40.000 0.00 0.00 0.00 3.16
7701 17639 5.012239 ACATGTATGCAAGGATGAAAGTGT 58.988 37.500 0.00 0.00 0.00 3.55
7702 17640 6.093909 CACATGTATGCAAGGATGAAAGTGTA 59.906 38.462 0.00 0.00 0.00 2.90
7703 17641 6.830324 ACATGTATGCAAGGATGAAAGTGTAT 59.170 34.615 0.00 0.00 0.00 2.29
7704 17642 6.682423 TGTATGCAAGGATGAAAGTGTATG 57.318 37.500 0.00 0.00 0.00 2.39
7705 17643 6.179756 TGTATGCAAGGATGAAAGTGTATGT 58.820 36.000 0.00 0.00 0.00 2.29
7706 17644 5.571784 ATGCAAGGATGAAAGTGTATGTG 57.428 39.130 0.00 0.00 0.00 3.21
7707 17645 4.650734 TGCAAGGATGAAAGTGTATGTGA 58.349 39.130 0.00 0.00 0.00 3.58
7708 17646 5.069318 TGCAAGGATGAAAGTGTATGTGAA 58.931 37.500 0.00 0.00 0.00 3.18
7709 17647 5.534278 TGCAAGGATGAAAGTGTATGTGAAA 59.466 36.000 0.00 0.00 0.00 2.69
7710 17648 5.858581 GCAAGGATGAAAGTGTATGTGAAAC 59.141 40.000 0.00 0.00 37.35 2.78
7740 17678 9.177608 TCAGGATGAAATACCTTAAATTGTGAG 57.822 33.333 0.00 0.00 45.97 3.51
7741 17679 7.917505 CAGGATGAAATACCTTAAATTGTGAGC 59.082 37.037 0.00 0.00 39.69 4.26
7742 17680 7.836183 AGGATGAAATACCTTAAATTGTGAGCT 59.164 33.333 0.00 0.00 31.95 4.09
7743 17681 7.917505 GGATGAAATACCTTAAATTGTGAGCTG 59.082 37.037 0.00 0.00 0.00 4.24
7744 17682 6.620678 TGAAATACCTTAAATTGTGAGCTGC 58.379 36.000 0.00 0.00 0.00 5.25
7745 17683 6.208402 TGAAATACCTTAAATTGTGAGCTGCA 59.792 34.615 1.02 0.00 0.00 4.41
7782 17720 9.554395 TCATTGACTTTAAAGATGAACAGTACA 57.446 29.630 21.92 3.65 0.00 2.90
7787 17725 9.922305 GACTTTAAAGATGAACAGTACATATGC 57.078 33.333 21.92 0.00 0.00 3.14
7788 17726 9.672673 ACTTTAAAGATGAACAGTACATATGCT 57.327 29.630 21.92 0.00 0.00 3.79
7794 17732 8.147642 AGATGAACAGTACATATGCTAAAAGC 57.852 34.615 1.58 0.00 42.82 3.51
7795 17733 6.677781 TGAACAGTACATATGCTAAAAGCC 57.322 37.500 1.58 0.00 41.51 4.35
7796 17734 5.588648 TGAACAGTACATATGCTAAAAGCCC 59.411 40.000 1.58 0.00 41.51 5.19
7797 17735 4.461198 ACAGTACATATGCTAAAAGCCCC 58.539 43.478 1.58 0.00 41.51 5.80
7798 17736 4.080015 ACAGTACATATGCTAAAAGCCCCA 60.080 41.667 1.58 0.00 41.51 4.96
7799 17737 4.516698 CAGTACATATGCTAAAAGCCCCAG 59.483 45.833 1.58 0.00 41.51 4.45
7800 17738 3.951563 ACATATGCTAAAAGCCCCAGA 57.048 42.857 1.58 0.00 41.51 3.86
7801 17739 4.459852 ACATATGCTAAAAGCCCCAGAT 57.540 40.909 1.58 0.00 41.51 2.90
7802 17740 4.808042 ACATATGCTAAAAGCCCCAGATT 58.192 39.130 1.58 0.00 41.51 2.40
7803 17741 5.211201 ACATATGCTAAAAGCCCCAGATTT 58.789 37.500 1.58 0.00 41.51 2.17
7804 17742 5.069516 ACATATGCTAAAAGCCCCAGATTTG 59.930 40.000 1.58 0.00 41.51 2.32
7805 17743 2.888212 TGCTAAAAGCCCCAGATTTGT 58.112 42.857 0.00 0.00 41.51 2.83
7806 17744 2.825532 TGCTAAAAGCCCCAGATTTGTC 59.174 45.455 0.00 0.00 41.51 3.18
7807 17745 3.092301 GCTAAAAGCCCCAGATTTGTCT 58.908 45.455 0.00 0.00 34.48 3.41
7808 17746 3.511540 GCTAAAAGCCCCAGATTTGTCTT 59.488 43.478 0.00 0.00 34.48 3.01
7809 17747 4.021104 GCTAAAAGCCCCAGATTTGTCTTT 60.021 41.667 0.00 0.00 34.48 2.52
7810 17748 5.511373 GCTAAAAGCCCCAGATTTGTCTTTT 60.511 40.000 10.61 10.61 37.47 2.27
7811 17749 5.372343 AAAAGCCCCAGATTTGTCTTTTT 57.628 34.783 0.00 0.00 31.97 1.94
7836 17774 6.657836 GTGTAGCTCACGGTTTAATGTATT 57.342 37.500 0.00 0.00 37.31 1.89
7837 17775 7.068692 GTGTAGCTCACGGTTTAATGTATTT 57.931 36.000 0.00 0.00 37.31 1.40
7838 17776 7.178074 GTGTAGCTCACGGTTTAATGTATTTC 58.822 38.462 0.00 0.00 37.31 2.17
7839 17777 5.464965 AGCTCACGGTTTAATGTATTTCG 57.535 39.130 0.00 0.00 0.00 3.46
7840 17778 5.172934 AGCTCACGGTTTAATGTATTTCGA 58.827 37.500 0.00 0.00 0.00 3.71
7841 17779 5.063060 AGCTCACGGTTTAATGTATTTCGAC 59.937 40.000 0.00 0.00 0.00 4.20
7842 17780 5.725864 GCTCACGGTTTAATGTATTTCGACC 60.726 44.000 0.00 0.00 0.00 4.79
7843 17781 5.481105 TCACGGTTTAATGTATTTCGACCT 58.519 37.500 0.00 0.00 0.00 3.85
7844 17782 5.349270 TCACGGTTTAATGTATTTCGACCTG 59.651 40.000 0.00 0.00 0.00 4.00
7845 17783 5.349270 CACGGTTTAATGTATTTCGACCTGA 59.651 40.000 0.00 0.00 0.00 3.86
7846 17784 5.933463 ACGGTTTAATGTATTTCGACCTGAA 59.067 36.000 0.00 0.00 33.85 3.02
7856 17794 4.377839 TTTCGACCTGAAAATTTGCACA 57.622 36.364 0.00 0.00 43.46 4.57
7857 17795 3.347958 TCGACCTGAAAATTTGCACAC 57.652 42.857 0.00 0.00 0.00 3.82
7858 17796 2.043411 CGACCTGAAAATTTGCACACG 58.957 47.619 0.00 0.00 0.00 4.49
7859 17797 2.540769 CGACCTGAAAATTTGCACACGT 60.541 45.455 0.00 0.00 0.00 4.49
7860 17798 2.788786 GACCTGAAAATTTGCACACGTG 59.211 45.455 15.48 15.48 0.00 4.49
7861 17799 2.165437 ACCTGAAAATTTGCACACGTGT 59.835 40.909 17.22 17.22 0.00 4.49
7862 17800 3.378742 ACCTGAAAATTTGCACACGTGTA 59.621 39.130 22.90 6.04 0.00 2.90
7863 17801 3.728718 CCTGAAAATTTGCACACGTGTAC 59.271 43.478 22.90 17.23 0.00 2.90
7864 17802 4.346970 CTGAAAATTTGCACACGTGTACA 58.653 39.130 22.90 20.07 0.00 2.90
7865 17803 4.926244 TGAAAATTTGCACACGTGTACAT 58.074 34.783 22.90 6.25 0.00 2.29
7866 17804 5.344066 TGAAAATTTGCACACGTGTACATT 58.656 33.333 22.90 12.87 29.14 2.71
7867 17805 6.495706 TGAAAATTTGCACACGTGTACATTA 58.504 32.000 22.90 13.24 28.21 1.90
7868 17806 7.142021 TGAAAATTTGCACACGTGTACATTAT 58.858 30.769 22.90 14.89 28.21 1.28
7869 17807 6.926280 AAATTTGCACACGTGTACATTATG 57.074 33.333 22.90 8.35 28.21 1.90
7870 17808 5.621197 ATTTGCACACGTGTACATTATGT 57.379 34.783 22.90 2.58 0.00 2.29
7871 17809 6.729391 ATTTGCACACGTGTACATTATGTA 57.271 33.333 22.90 2.45 0.00 2.29
7872 17810 6.729391 TTTGCACACGTGTACATTATGTAT 57.271 33.333 22.90 0.00 35.05 2.29
7873 17811 5.959652 TGCACACGTGTACATTATGTATC 57.040 39.130 22.90 4.75 35.05 2.24
7874 17812 5.656480 TGCACACGTGTACATTATGTATCT 58.344 37.500 22.90 0.00 35.05 1.98
7875 17813 6.797454 TGCACACGTGTACATTATGTATCTA 58.203 36.000 22.90 0.00 35.05 1.98
7876 17814 6.915843 TGCACACGTGTACATTATGTATCTAG 59.084 38.462 22.90 3.96 35.05 2.43
7877 17815 6.362551 GCACACGTGTACATTATGTATCTAGG 59.637 42.308 22.90 3.55 35.05 3.02
7878 17816 7.423199 CACACGTGTACATTATGTATCTAGGT 58.577 38.462 22.90 7.34 35.05 3.08
7879 17817 8.562052 CACACGTGTACATTATGTATCTAGGTA 58.438 37.037 22.90 0.00 35.05 3.08
7880 17818 9.293404 ACACGTGTACATTATGTATCTAGGTAT 57.707 33.333 21.98 0.00 35.05 2.73
7928 17866 9.952188 TTTTTGAAACCGAAAAGTTTGAATTTT 57.048 22.222 0.00 0.00 40.01 1.82
7929 17867 8.941127 TTTGAAACCGAAAAGTTTGAATTTTG 57.059 26.923 0.00 0.00 40.01 2.44
7930 17868 7.891183 TGAAACCGAAAAGTTTGAATTTTGA 57.109 28.000 0.00 0.00 40.01 2.69
7931 17869 8.311650 TGAAACCGAAAAGTTTGAATTTTGAA 57.688 26.923 0.00 0.00 40.01 2.69
7932 17870 8.439286 TGAAACCGAAAAGTTTGAATTTTGAAG 58.561 29.630 0.00 0.00 40.01 3.02
7933 17871 7.899178 AACCGAAAAGTTTGAATTTTGAAGT 57.101 28.000 0.00 0.00 30.22 3.01
7934 17872 7.899178 ACCGAAAAGTTTGAATTTTGAAGTT 57.101 28.000 0.00 0.00 30.22 2.66
7935 17873 7.959733 ACCGAAAAGTTTGAATTTTGAAGTTC 58.040 30.769 0.00 0.00 30.22 3.01
7936 17874 7.817478 ACCGAAAAGTTTGAATTTTGAAGTTCT 59.183 29.630 4.17 0.00 30.22 3.01
7937 17875 8.321005 CCGAAAAGTTTGAATTTTGAAGTTCTC 58.679 33.333 4.17 0.00 30.22 2.87
7938 17876 8.859156 CGAAAAGTTTGAATTTTGAAGTTCTCA 58.141 29.630 4.17 0.00 30.22 3.27
7949 17887 6.976934 TTTGAAGTTCTCAAATAAAGGCCT 57.023 33.333 0.00 0.00 46.80 5.19
7950 17888 6.976934 TTGAAGTTCTCAAATAAAGGCCTT 57.023 33.333 13.78 13.78 41.21 4.35
7951 17889 6.976934 TGAAGTTCTCAAATAAAGGCCTTT 57.023 33.333 32.37 32.37 36.63 3.11
7952 17890 8.472007 TTGAAGTTCTCAAATAAAGGCCTTTA 57.528 30.769 34.29 34.29 41.21 1.85
7953 17891 8.650143 TGAAGTTCTCAAATAAAGGCCTTTAT 57.350 30.769 35.31 35.31 44.89 1.40
7954 17892 8.522830 TGAAGTTCTCAAATAAAGGCCTTTATG 58.477 33.333 39.05 31.39 42.91 1.90
7955 17893 7.410120 AGTTCTCAAATAAAGGCCTTTATGG 57.590 36.000 39.05 33.09 42.91 2.74
7956 17894 7.182060 AGTTCTCAAATAAAGGCCTTTATGGA 58.818 34.615 39.05 34.56 42.91 3.41
7957 17895 7.340487 AGTTCTCAAATAAAGGCCTTTATGGAG 59.660 37.037 38.70 38.70 42.91 3.86
7958 17896 5.594317 TCTCAAATAAAGGCCTTTATGGAGC 59.406 40.000 39.06 7.86 42.91 4.70
7959 17897 5.518865 TCAAATAAAGGCCTTTATGGAGCT 58.481 37.500 39.05 25.82 42.91 4.09
7960 17898 5.594317 TCAAATAAAGGCCTTTATGGAGCTC 59.406 40.000 39.05 4.71 42.91 4.09
7961 17899 2.044123 AAAGGCCTTTATGGAGCTCG 57.956 50.000 29.47 0.00 38.35 5.03
7962 17900 0.181350 AAGGCCTTTATGGAGCTCGG 59.819 55.000 13.78 2.99 38.35 4.63
7963 17901 0.983378 AGGCCTTTATGGAGCTCGGT 60.983 55.000 7.83 0.82 38.35 4.69
7964 17902 0.533085 GGCCTTTATGGAGCTCGGTC 60.533 60.000 7.83 0.00 38.35 4.79
7965 17903 0.466124 GCCTTTATGGAGCTCGGTCT 59.534 55.000 7.83 0.00 38.35 3.85
7966 17904 1.539280 GCCTTTATGGAGCTCGGTCTC 60.539 57.143 7.83 0.00 38.35 3.36
7977 17915 3.981308 CGGTCTCCGTTTGGCATT 58.019 55.556 0.00 0.00 42.73 3.56
7978 17916 2.253513 CGGTCTCCGTTTGGCATTT 58.746 52.632 0.00 0.00 42.73 2.32
7979 17917 0.596082 CGGTCTCCGTTTGGCATTTT 59.404 50.000 0.00 0.00 42.73 1.82
7980 17918 1.401018 CGGTCTCCGTTTGGCATTTTC 60.401 52.381 0.00 0.00 42.73 2.29
7981 17919 1.401018 GGTCTCCGTTTGGCATTTTCG 60.401 52.381 0.00 0.00 34.14 3.46
7982 17920 1.265905 GTCTCCGTTTGGCATTTTCGT 59.734 47.619 0.00 0.00 34.14 3.85
7983 17921 1.950909 TCTCCGTTTGGCATTTTCGTT 59.049 42.857 0.00 0.00 34.14 3.85
7984 17922 2.359531 TCTCCGTTTGGCATTTTCGTTT 59.640 40.909 0.00 0.00 34.14 3.60
7985 17923 3.564644 TCTCCGTTTGGCATTTTCGTTTA 59.435 39.130 0.00 0.00 34.14 2.01
7986 17924 4.216687 TCTCCGTTTGGCATTTTCGTTTAT 59.783 37.500 0.00 0.00 34.14 1.40
7987 17925 4.872664 TCCGTTTGGCATTTTCGTTTATT 58.127 34.783 0.00 0.00 34.14 1.40
7988 17926 6.010294 TCCGTTTGGCATTTTCGTTTATTA 57.990 33.333 0.00 0.00 34.14 0.98
7989 17927 6.087522 TCCGTTTGGCATTTTCGTTTATTAG 58.912 36.000 0.00 0.00 34.14 1.73
7990 17928 6.072618 TCCGTTTGGCATTTTCGTTTATTAGA 60.073 34.615 0.00 0.00 34.14 2.10
7991 17929 6.033091 CCGTTTGGCATTTTCGTTTATTAGAC 59.967 38.462 0.00 0.00 0.00 2.59
7992 17930 6.579292 CGTTTGGCATTTTCGTTTATTAGACA 59.421 34.615 0.00 0.00 0.00 3.41
7993 17931 7.201232 CGTTTGGCATTTTCGTTTATTAGACAG 60.201 37.037 0.00 0.00 0.00 3.51
7994 17932 6.811253 TGGCATTTTCGTTTATTAGACAGT 57.189 33.333 0.00 0.00 0.00 3.55
7995 17933 7.908827 TGGCATTTTCGTTTATTAGACAGTA 57.091 32.000 0.00 0.00 0.00 2.74
7996 17934 8.500753 TGGCATTTTCGTTTATTAGACAGTAT 57.499 30.769 0.00 0.00 0.00 2.12
7997 17935 8.609176 TGGCATTTTCGTTTATTAGACAGTATC 58.391 33.333 0.00 0.00 0.00 2.24
7998 17936 8.827677 GGCATTTTCGTTTATTAGACAGTATCT 58.172 33.333 0.00 0.00 41.95 1.98
8026 17964 5.070446 TCGATATCCTTAGTCCATGCACTTT 59.930 40.000 0.00 0.00 0.00 2.66
8027 17965 6.266786 TCGATATCCTTAGTCCATGCACTTTA 59.733 38.462 0.00 0.00 0.00 1.85
8030 17968 5.692115 TCCTTAGTCCATGCACTTTATCA 57.308 39.130 0.00 0.00 0.00 2.15
8034 17972 7.121168 TCCTTAGTCCATGCACTTTATCAAAAG 59.879 37.037 0.00 0.00 46.34 2.27
8038 17976 7.899973 AGTCCATGCACTTTATCAAAAGAAAT 58.100 30.769 4.95 0.00 44.14 2.17
8044 17982 8.464770 TGCACTTTATCAAAAGAAATGCATAC 57.535 30.769 0.00 0.00 42.54 2.39
8060 17998 7.864108 AATGCATACTCTAATTGTTGTGCTA 57.136 32.000 0.00 0.00 32.73 3.49
8062 18000 6.406370 TGCATACTCTAATTGTTGTGCTACT 58.594 36.000 0.00 0.00 32.73 2.57
8065 18003 9.046296 GCATACTCTAATTGTTGTGCTACTTAT 57.954 33.333 0.00 0.00 0.00 1.73
8096 18043 1.632409 AGCCAGTCCTGAATGATGTGT 59.368 47.619 0.00 0.00 0.00 3.72
8097 18044 2.040813 AGCCAGTCCTGAATGATGTGTT 59.959 45.455 0.00 0.00 0.00 3.32
8098 18045 2.821969 GCCAGTCCTGAATGATGTGTTT 59.178 45.455 0.00 0.00 0.00 2.83
8099 18046 3.256631 GCCAGTCCTGAATGATGTGTTTT 59.743 43.478 0.00 0.00 0.00 2.43
8100 18047 4.616835 GCCAGTCCTGAATGATGTGTTTTC 60.617 45.833 0.00 0.00 0.00 2.29
8101 18048 4.082571 CCAGTCCTGAATGATGTGTTTTCC 60.083 45.833 0.00 0.00 0.00 3.13
8102 18049 4.763793 CAGTCCTGAATGATGTGTTTTCCT 59.236 41.667 0.00 0.00 0.00 3.36
8103 18050 5.242393 CAGTCCTGAATGATGTGTTTTCCTT 59.758 40.000 0.00 0.00 0.00 3.36
8104 18051 5.835280 AGTCCTGAATGATGTGTTTTCCTTT 59.165 36.000 0.00 0.00 0.00 3.11
8105 18052 6.324770 AGTCCTGAATGATGTGTTTTCCTTTT 59.675 34.615 0.00 0.00 0.00 2.27
8106 18053 6.986231 GTCCTGAATGATGTGTTTTCCTTTTT 59.014 34.615 0.00 0.00 0.00 1.94
8142 18089 3.615056 CGTAATGCTCGTGTTATGGTTGA 59.385 43.478 0.00 0.00 0.00 3.18
8150 18097 7.892609 TGCTCGTGTTATGGTTGATATATACT 58.107 34.615 0.00 0.00 0.00 2.12
8155 18102 7.598869 CGTGTTATGGTTGATATATACTGTGCT 59.401 37.037 0.00 0.00 0.00 4.40
8162 18109 5.139435 TGATATATACTGTGCTGCTGTCC 57.861 43.478 0.00 0.00 0.00 4.02
8167 18114 2.848679 TGTGCTGCTGTCCTCCCA 60.849 61.111 0.00 0.00 0.00 4.37
8183 18130 6.127793 GTCCTCCCAGTAACTTCTAGTCATA 58.872 44.000 0.00 0.00 0.00 2.15
8184 18131 6.778559 GTCCTCCCAGTAACTTCTAGTCATAT 59.221 42.308 0.00 0.00 0.00 1.78
8226 18174 8.409371 TGCACATATTATCGCCTGATTTTTAAA 58.591 29.630 0.00 0.00 35.99 1.52
8236 18184 7.703328 TCGCCTGATTTTTAAATATGAGGTTC 58.297 34.615 19.73 8.15 0.00 3.62
8238 18186 7.645340 CGCCTGATTTTTAAATATGAGGTTCAG 59.355 37.037 19.73 10.21 0.00 3.02
8276 18224 7.987458 TGTATTCTTAAATCCATCGAAAGCTCT 59.013 33.333 0.00 0.00 0.00 4.09
8360 18309 9.768662 ATTGGAAAAATATTTGATCATGCCTAC 57.231 29.630 0.39 0.00 0.00 3.18
8406 18355 8.907222 ATGCAAAACTACAAATCAATTTTCCT 57.093 26.923 0.00 0.00 0.00 3.36
8407 18356 9.995003 ATGCAAAACTACAAATCAATTTTCCTA 57.005 25.926 0.00 0.00 0.00 2.94
8408 18357 9.823647 TGCAAAACTACAAATCAATTTTCCTAA 57.176 25.926 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 1189 1.149101 ACAAGGTGTGAGGGGACAAT 58.851 50.000 0.00 0.00 0.00 2.71
101 1191 4.411164 ACAAGGTGTGAGGGGACA 57.589 55.556 0.00 0.00 0.00 4.02
127 1217 3.635331 TGACGAAACAAGAAGTAGTCGG 58.365 45.455 0.00 0.00 40.37 4.79
128 1218 5.630896 TTTGACGAAACAAGAAGTAGTCG 57.369 39.130 0.00 0.00 41.27 4.18
151 1241 2.353011 CCAACGAAGCTAGGGAAACGTA 60.353 50.000 0.00 0.00 33.76 3.57
166 1256 1.065709 GGCCCTCTGAAATACCAACGA 60.066 52.381 0.00 0.00 0.00 3.85
377 6912 2.016318 TGAATGTGGCCGATGTGAATC 58.984 47.619 0.00 0.00 0.00 2.52
387 6922 1.066002 CGGACATGATTGAATGTGGCC 59.934 52.381 0.00 0.00 40.87 5.36
389 6924 5.756195 ATAACGGACATGATTGAATGTGG 57.244 39.130 0.00 0.00 40.87 4.17
405 8035 3.187227 GCTGTTGGATGCAGATATAACGG 59.813 47.826 0.00 0.00 36.12 4.44
438 8068 3.142028 AGGAAAATTGTGGGAGGAGGAAA 59.858 43.478 0.00 0.00 0.00 3.13
454 9178 6.780031 TGGATTGGATCTTGTGTAAAGGAAAA 59.220 34.615 0.00 0.00 0.00 2.29
458 9182 4.096984 GCTGGATTGGATCTTGTGTAAAGG 59.903 45.833 0.00 0.00 0.00 3.11
490 10296 0.748005 CTGGGTTAGATGGCGGTTGG 60.748 60.000 0.00 0.00 0.00 3.77
519 10326 2.348998 GTGAGTGGTGGAGGCCTG 59.651 66.667 12.00 0.00 0.00 4.85
520 10327 3.314331 CGTGAGTGGTGGAGGCCT 61.314 66.667 3.86 3.86 0.00 5.19
530 10337 0.462047 GGTGATTAGGCCCGTGAGTG 60.462 60.000 0.00 0.00 0.00 3.51
533 10340 2.372074 GGGGTGATTAGGCCCGTGA 61.372 63.158 0.00 0.00 45.74 4.35
539 10346 2.461739 GGGGAGGGGGTGATTAGGC 61.462 68.421 0.00 0.00 0.00 3.93
543 10350 2.044620 GAGGGGGAGGGGGTGATT 59.955 66.667 0.00 0.00 0.00 2.57
547 10354 4.695791 GGTTGAGGGGGAGGGGGT 62.696 72.222 0.00 0.00 0.00 4.95
748 10572 1.028905 TCGGTCACTTTTGGCAAAGG 58.971 50.000 19.16 19.16 43.47 3.11
832 10657 7.977904 TCTACTCTCACGTAATTATTCGTTCA 58.022 34.615 0.00 0.00 38.23 3.18
848 10673 2.565834 CGGAAAAACCCCTCTACTCTCA 59.434 50.000 0.00 0.00 34.64 3.27
854 10679 5.247862 GTTATTCACGGAAAAACCCCTCTA 58.752 41.667 0.00 0.00 34.64 2.43
862 10687 5.051153 GCAAAAGGGTTATTCACGGAAAAA 58.949 37.500 0.00 0.00 0.00 1.94
875 10700 0.480252 AGCAGAGAGGCAAAAGGGTT 59.520 50.000 0.00 0.00 35.83 4.11
1168 11003 0.250338 ACGGAGCAAACCAAGGAGAC 60.250 55.000 0.00 0.00 0.00 3.36
1169 11004 0.472471 AACGGAGCAAACCAAGGAGA 59.528 50.000 0.00 0.00 0.00 3.71
1171 11006 1.452145 GCAACGGAGCAAACCAAGGA 61.452 55.000 0.00 0.00 0.00 3.36
1172 11007 1.007387 GCAACGGAGCAAACCAAGG 60.007 57.895 0.00 0.00 0.00 3.61
1173 11008 1.370414 CGCAACGGAGCAAACCAAG 60.370 57.895 2.33 0.00 0.00 3.61
1174 11009 2.115911 ACGCAACGGAGCAAACCAA 61.116 52.632 2.33 0.00 0.00 3.67
1233 11068 1.220749 GGGCCTCTGCACGATGTTA 59.779 57.895 0.84 0.00 40.13 2.41
1300 11137 1.526917 ATCAGGCAACCGCATAGGC 60.527 57.895 0.00 0.00 46.52 3.93
1302 11139 1.650912 GCATCAGGCAACCGCATAG 59.349 57.895 0.00 0.00 43.97 2.23
1307 11144 1.063006 CATTCGCATCAGGCAACCG 59.937 57.895 0.00 0.00 45.17 4.44
1338 11175 0.922111 CAAACGAACCACAACGACGC 60.922 55.000 0.00 0.00 0.00 5.19
1387 11224 1.964373 ACCAACGGAATGCCACGAC 60.964 57.895 0.00 0.00 0.00 4.34
1499 11336 7.994334 TGACAGTAAGTAAACCAAAGTACCATT 59.006 33.333 0.00 0.00 0.00 3.16
1500 11337 7.511268 TGACAGTAAGTAAACCAAAGTACCAT 58.489 34.615 0.00 0.00 0.00 3.55
1502 11339 6.988580 ACTGACAGTAAGTAAACCAAAGTACC 59.011 38.462 6.24 0.00 0.00 3.34
1503 11340 7.707893 TCACTGACAGTAAGTAAACCAAAGTAC 59.292 37.037 8.02 0.00 0.00 2.73
1586 11435 0.800683 CCATGAACATTGCAGCGCAG 60.801 55.000 11.47 1.31 40.61 5.18
1588 11437 0.388907 AACCATGAACATTGCAGCGC 60.389 50.000 0.00 0.00 0.00 5.92
1590 11439 3.430895 CAGAAAACCATGAACATTGCAGC 59.569 43.478 0.00 0.00 0.00 5.25
1639 11488 5.240183 ACAAGTCCATCAACTGACATTCAAG 59.760 40.000 0.00 0.00 33.89 3.02
1833 11699 4.719273 TGACCCACATATTCCATGTACTCA 59.281 41.667 0.00 0.00 0.00 3.41
1886 11752 6.238456 CCATTTGCTAATCTCGCTGACAAATA 60.238 38.462 0.00 0.00 35.22 1.40
1949 11815 0.607489 GACAGGCCACATTGACTGCT 60.607 55.000 5.01 0.00 34.40 4.24
1991 11857 7.625185 GCGCATCCCTAAAAATGCAAAAATTAA 60.625 33.333 0.30 0.00 46.83 1.40
2011 11878 2.301577 AGACCTAAGAGTTGCGCATC 57.698 50.000 12.75 11.46 0.00 3.91
2014 11881 1.727335 GTCAAGACCTAAGAGTTGCGC 59.273 52.381 0.00 0.00 0.00 6.09
2015 11882 3.305398 AGTCAAGACCTAAGAGTTGCG 57.695 47.619 0.00 0.00 0.00 4.85
2102 11969 6.773976 TCGAATTTTCCCTTAAGCATTGAT 57.226 33.333 0.00 0.00 0.00 2.57
2116 11983 3.592898 AGGGGCACAAATCGAATTTTC 57.407 42.857 0.00 0.00 0.00 2.29
2127 11994 3.454082 ACTCAAAATCAAAAGGGGCACAA 59.546 39.130 0.00 0.00 0.00 3.33
2361 12229 4.749245 ATCAGGTGCAAAGTAAAAGACG 57.251 40.909 0.00 0.00 0.00 4.18
2448 12316 8.303876 GGTAACTGGAATTGTAAATTGACATGT 58.696 33.333 0.00 0.00 0.00 3.21
2467 12335 8.350722 CCACTACATATACTACACTGGTAACTG 58.649 40.741 0.00 0.00 42.06 3.16
2485 12353 1.938069 AGTCCCTAGTCCCCACTACAT 59.062 52.381 0.00 0.00 33.62 2.29
2504 12372 8.541234 ACTAGAAAAATGTTTCCTAGTCCCTAG 58.459 37.037 4.66 1.04 43.65 3.02
2505 12373 8.319146 CACTAGAAAAATGTTTCCTAGTCCCTA 58.681 37.037 4.66 0.00 43.65 3.53
2506 12374 7.017254 TCACTAGAAAAATGTTTCCTAGTCCCT 59.983 37.037 4.66 0.00 43.65 4.20
2507 12375 7.166167 TCACTAGAAAAATGTTTCCTAGTCCC 58.834 38.462 4.66 0.00 43.65 4.46
2508 12376 7.878644 ACTCACTAGAAAAATGTTTCCTAGTCC 59.121 37.037 4.66 0.00 43.65 3.85
2509 12377 8.713271 CACTCACTAGAAAAATGTTTCCTAGTC 58.287 37.037 4.66 0.00 43.65 2.59
2510 12378 7.661847 CCACTCACTAGAAAAATGTTTCCTAGT 59.338 37.037 4.66 9.02 43.65 2.57
2511 12379 7.878127 TCCACTCACTAGAAAAATGTTTCCTAG 59.122 37.037 4.66 8.48 43.65 3.02
2552 12420 3.969553 AGATCTTTCCCAAAGCCCTTAC 58.030 45.455 0.00 0.00 38.39 2.34
2571 12439 2.370349 CTCGGAGGCTGAGACTAAAGA 58.630 52.381 0.00 0.00 39.05 2.52
2581 12449 0.462581 TTGCTTATGCTCGGAGGCTG 60.463 55.000 7.20 0.00 40.48 4.85
2588 12456 2.076100 TGTTCACCTTGCTTATGCTCG 58.924 47.619 1.96 0.00 40.48 5.03
2613 12481 5.886960 AAATGGAGTTGCATAGTTCACTC 57.113 39.130 5.56 5.56 0.00 3.51
2620 12488 4.707030 TGCAGAAAATGGAGTTGCATAG 57.293 40.909 0.00 0.00 39.61 2.23
2638 12506 0.961019 GTCCCTGCTTGTCATTTGCA 59.039 50.000 0.00 0.00 35.30 4.08
2640 12508 1.522668 TCGTCCCTGCTTGTCATTTG 58.477 50.000 0.00 0.00 0.00 2.32
2653 12522 4.703897 TGGTGAAATGAGATAATCGTCCC 58.296 43.478 0.00 0.00 0.00 4.46
2689 12558 3.375299 CCTGTGTTATTCCTTAGCACTGC 59.625 47.826 0.00 0.00 41.25 4.40
2690 12559 4.832248 TCCTGTGTTATTCCTTAGCACTG 58.168 43.478 0.00 0.00 41.25 3.66
2691 12560 5.248477 TCTTCCTGTGTTATTCCTTAGCACT 59.752 40.000 0.00 0.00 41.25 4.40
2692 12561 5.488341 TCTTCCTGTGTTATTCCTTAGCAC 58.512 41.667 0.00 0.00 41.11 4.40
2707 12582 2.236395 CCGGAATACCAACTCTTCCTGT 59.764 50.000 0.00 0.00 36.99 4.00
2744 12619 7.484007 CACTTTACAGATTCATTGCATGAGAAC 59.516 37.037 0.00 0.00 40.94 3.01
2772 12647 7.043325 CGAGACTAAATAAACTGATGTGTAGGC 60.043 40.741 0.00 0.00 0.00 3.93
2787 12672 8.683615 TCAGATTTAGAACTGCGAGACTAAATA 58.316 33.333 18.79 10.66 42.03 1.40
2853 12738 9.965824 CAAAGTTGGTGAAGTTTAAAGATACAT 57.034 29.630 0.00 0.00 33.69 2.29
2887 12772 9.535170 TGGGTTGTGAAATAATTGTTTATAGGA 57.465 29.630 0.00 0.00 0.00 2.94
2888 12773 9.801873 CTGGGTTGTGAAATAATTGTTTATAGG 57.198 33.333 0.00 0.00 0.00 2.57
2889 12774 9.801873 CCTGGGTTGTGAAATAATTGTTTATAG 57.198 33.333 0.00 0.00 0.00 1.31
2974 12861 0.182775 GGCCCACCTGATCGGTATTT 59.817 55.000 8.59 0.00 46.94 1.40
3111 12998 8.292448 AGTTCATAAGTCATAACAAAAGCACAG 58.708 33.333 0.00 0.00 0.00 3.66
3137 13024 6.321435 ACTGCACTACTATACTAACAGATGCA 59.679 38.462 0.00 0.00 37.72 3.96
3205 13092 6.454583 CGATACCAAAAGCTGAAATGCAAATG 60.455 38.462 0.00 0.00 34.99 2.32
3244 13131 6.530120 TCCAAGCTTCTGATTGTACTTGTAA 58.470 36.000 0.00 0.00 37.84 2.41
3274 13161 0.830648 TAGCCAACCCATCTTCTCCG 59.169 55.000 0.00 0.00 0.00 4.63
3391 13278 5.762179 TGGTATCTGACAAAAGGAGACAT 57.238 39.130 0.00 0.00 0.00 3.06
3583 13470 1.073923 GGAGCAGAAAAAGGGGACAGA 59.926 52.381 0.00 0.00 0.00 3.41
3592 13479 0.478072 TGGAGCTGGGAGCAGAAAAA 59.522 50.000 0.00 0.00 45.56 1.94
3677 13564 2.475155 TCATGGAGAGAGTGCCAGAAT 58.525 47.619 0.00 0.00 37.64 2.40
3704 13591 9.298250 GTGTCTAACATGGAGGAGTATATAAGA 57.702 37.037 0.00 0.00 0.00 2.10
4237 14143 4.339247 CCAACATGGCTTTTAGTCCATAGG 59.661 45.833 0.00 0.00 40.88 2.57
4438 14344 8.752005 ATTACTGTTAGACATGCAAATGGTAT 57.248 30.769 0.00 0.00 0.00 2.73
4587 14493 6.612247 TTGACAAGCGAACAAAGAAATAGA 57.388 33.333 0.00 0.00 0.00 1.98
4642 14548 8.936864 AGAATGTCCTTTCTATACGAAAAACAG 58.063 33.333 0.00 0.00 40.87 3.16
4671 14577 7.856145 AGAAAATGATAAGCAACTGGAGTAG 57.144 36.000 0.00 0.00 0.00 2.57
4672 14578 9.383519 CTAAGAAAATGATAAGCAACTGGAGTA 57.616 33.333 0.00 0.00 0.00 2.59
5248 15154 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5249 15155 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5250 15156 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5251 15157 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5252 15158 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5253 15159 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
5254 15160 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
5255 15161 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
5256 15162 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
5257 15163 5.834239 TTTCGAGACAAGTAATTCCGAAC 57.166 39.130 0.00 0.00 34.86 3.95
5258 15164 6.128391 CCATTTTCGAGACAAGTAATTCCGAA 60.128 38.462 0.00 0.00 33.57 4.30
5259 15165 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
5260 15166 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
5261 15167 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
5262 15168 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
5263 15169 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
5264 15170 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
5265 15171 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
5266 15172 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
5267 15173 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
5268 15174 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
5269 15175 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
5270 15176 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
5271 15177 8.085296 ACATCTAGATACATCCATTTTCGAGAC 58.915 37.037 4.54 0.00 0.00 3.36
5272 15178 8.183104 ACATCTAGATACATCCATTTTCGAGA 57.817 34.615 4.54 0.00 0.00 4.04
5299 15205 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
5300 15206 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
5301 15207 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
5302 15208 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
5303 15209 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
5304 15210 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
5305 15211 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
5306 15212 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
5307 15213 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
5308 15214 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
5309 15215 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
5310 15216 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
5311 15217 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
5312 15218 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
5313 15219 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
5314 15220 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
5315 15221 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
5316 15222 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
5317 15223 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
5318 15224 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
5319 15225 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
5320 15226 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
5321 15227 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
5322 15228 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
5323 15229 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
5324 15230 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
5325 15231 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
5326 15232 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
5327 15233 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5328 15234 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5329 15235 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5330 15236 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5331 15237 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5332 15238 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5333 15239 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5334 15240 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
5335 15241 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
5336 15242 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
5337 15243 0.393537 GACTACTCCCTCCGTTCGGA 60.394 60.000 13.34 13.34 0.00 4.55
5338 15244 0.679002 TGACTACTCCCTCCGTTCGG 60.679 60.000 4.74 4.74 0.00 4.30
5339 15245 1.135460 GTTGACTACTCCCTCCGTTCG 60.135 57.143 0.00 0.00 0.00 3.95
5340 15246 1.891150 TGTTGACTACTCCCTCCGTTC 59.109 52.381 0.00 0.00 0.00 3.95
5341 15247 2.005370 TGTTGACTACTCCCTCCGTT 57.995 50.000 0.00 0.00 0.00 4.44
5342 15248 2.005370 TTGTTGACTACTCCCTCCGT 57.995 50.000 0.00 0.00 0.00 4.69
5343 15249 2.496070 TCATTGTTGACTACTCCCTCCG 59.504 50.000 0.00 0.00 0.00 4.63
5344 15250 3.769844 TCTCATTGTTGACTACTCCCTCC 59.230 47.826 0.00 0.00 0.00 4.30
5345 15251 5.606348 ATCTCATTGTTGACTACTCCCTC 57.394 43.478 0.00 0.00 0.00 4.30
5346 15252 5.104735 GGAATCTCATTGTTGACTACTCCCT 60.105 44.000 0.00 0.00 0.00 4.20
5347 15253 5.119694 GGAATCTCATTGTTGACTACTCCC 58.880 45.833 0.00 0.00 0.00 4.30
5348 15254 5.734720 TGGAATCTCATTGTTGACTACTCC 58.265 41.667 0.00 0.00 0.00 3.85
5349 15255 7.856145 AATGGAATCTCATTGTTGACTACTC 57.144 36.000 0.00 0.00 36.16 2.59
5350 15256 9.911788 ATTAATGGAATCTCATTGTTGACTACT 57.088 29.630 7.06 0.00 37.82 2.57
5351 15257 9.941664 CATTAATGGAATCTCATTGTTGACTAC 57.058 33.333 7.62 0.00 37.82 2.73
5352 15258 9.685276 ACATTAATGGAATCTCATTGTTGACTA 57.315 29.630 19.37 0.00 37.82 2.59
5462 15368 6.068010 TCCTTCAACTGGATAAGAGCAAAAA 58.932 36.000 0.00 0.00 0.00 1.94
5481 15387 9.713713 AGTAGTATCTGTTTCTTCTTTTCCTTC 57.286 33.333 0.00 0.00 0.00 3.46
5577 15483 0.681733 TGCGCCTCTCTTCTTCTTGT 59.318 50.000 4.18 0.00 0.00 3.16
5770 15678 6.449956 AGGACTTTACCATATACTCCTTCCA 58.550 40.000 0.00 0.00 0.00 3.53
6138 16059 2.099431 GCAGTTCTGAGCTCAGCGG 61.099 63.158 34.48 23.45 43.46 5.52
6541 16469 3.329386 CTTTTGTCGCTTCCTCTGATCA 58.671 45.455 0.00 0.00 0.00 2.92
6766 16694 3.182182 TCGAGCAAGTTCTGATTCATCG 58.818 45.455 0.00 0.00 0.00 3.84
6812 16740 2.313342 AGAGGAAAGCTAGAGAGTGGGA 59.687 50.000 0.00 0.00 0.00 4.37
6822 16750 4.471025 TGGACATCATGAAGAGGAAAGCTA 59.529 41.667 4.68 0.00 0.00 3.32
6823 16751 3.265221 TGGACATCATGAAGAGGAAAGCT 59.735 43.478 4.68 0.00 0.00 3.74
6937 16865 5.920273 GTCATGTTTGTTCACAAATGTAGGG 59.080 40.000 8.32 0.00 46.12 3.53
7096 17024 1.069668 CTGACCATCTCATCGATGCCA 59.930 52.381 20.81 9.44 46.61 4.92
7150 17078 2.659016 CAGAGGCGCTCCTTGACA 59.341 61.111 7.64 0.00 44.46 3.58
7528 17466 6.657836 TTCTAAGCCGACTTAAAAGTATGC 57.342 37.500 7.61 7.61 39.88 3.14
7583 17521 2.678336 CGGTCTTCAAAATGCCCTACTC 59.322 50.000 0.00 0.00 0.00 2.59
7588 17526 0.171231 GCTCGGTCTTCAAAATGCCC 59.829 55.000 0.00 0.00 0.00 5.36
7589 17527 1.131315 GAGCTCGGTCTTCAAAATGCC 59.869 52.381 0.00 0.00 0.00 4.40
7590 17528 1.131315 GGAGCTCGGTCTTCAAAATGC 59.869 52.381 7.83 0.00 0.00 3.56
7591 17529 2.426522 TGGAGCTCGGTCTTCAAAATG 58.573 47.619 7.83 0.00 0.00 2.32
7592 17530 2.859165 TGGAGCTCGGTCTTCAAAAT 57.141 45.000 7.83 0.00 0.00 1.82
7593 17531 2.426522 CATGGAGCTCGGTCTTCAAAA 58.573 47.619 7.83 0.00 0.00 2.44
7594 17532 1.339055 CCATGGAGCTCGGTCTTCAAA 60.339 52.381 5.56 0.00 0.00 2.69
7595 17533 0.250234 CCATGGAGCTCGGTCTTCAA 59.750 55.000 5.56 0.00 0.00 2.69
7596 17534 0.614697 TCCATGGAGCTCGGTCTTCA 60.615 55.000 11.44 0.00 0.00 3.02
7597 17535 0.103937 CTCCATGGAGCTCGGTCTTC 59.896 60.000 28.45 0.00 35.31 2.87
7598 17536 2.206635 CTCCATGGAGCTCGGTCTT 58.793 57.895 28.45 0.00 35.31 3.01
7599 17537 3.947173 CTCCATGGAGCTCGGTCT 58.053 61.111 28.45 0.00 35.31 3.85
7607 17545 4.280819 TCAAAATAAAGGGCTCCATGGAG 58.719 43.478 33.73 33.73 44.56 3.86
7608 17546 4.329638 TCAAAATAAAGGGCTCCATGGA 57.670 40.909 15.27 15.27 0.00 3.41
7609 17547 5.419239 TTTCAAAATAAAGGGCTCCATGG 57.581 39.130 4.97 4.97 0.00 3.66
7610 17548 7.926674 ATTTTTCAAAATAAAGGGCTCCATG 57.073 32.000 0.00 0.00 36.88 3.66
7611 17549 8.162746 TGAATTTTTCAAAATAAAGGGCTCCAT 58.837 29.630 0.00 0.00 37.62 3.41
7612 17550 7.512992 TGAATTTTTCAAAATAAAGGGCTCCA 58.487 30.769 0.00 0.00 37.62 3.86
7613 17551 7.977789 TGAATTTTTCAAAATAAAGGGCTCC 57.022 32.000 0.00 0.00 37.62 4.70
7670 17608 8.065473 TCATCCTTGCATACATGTGTATTTTT 57.935 30.769 9.11 0.00 39.06 1.94
7671 17609 7.643569 TCATCCTTGCATACATGTGTATTTT 57.356 32.000 9.11 0.00 39.06 1.82
7672 17610 7.643569 TTCATCCTTGCATACATGTGTATTT 57.356 32.000 9.11 0.00 39.06 1.40
7673 17611 7.340232 ACTTTCATCCTTGCATACATGTGTATT 59.660 33.333 9.11 0.00 39.06 1.89
7674 17612 6.830324 ACTTTCATCCTTGCATACATGTGTAT 59.170 34.615 9.11 0.00 41.58 2.29
7675 17613 6.093909 CACTTTCATCCTTGCATACATGTGTA 59.906 38.462 9.11 0.00 34.67 2.90
7676 17614 5.012239 ACTTTCATCCTTGCATACATGTGT 58.988 37.500 9.11 0.00 0.00 3.72
7677 17615 5.106038 ACACTTTCATCCTTGCATACATGTG 60.106 40.000 9.11 0.00 0.00 3.21
7678 17616 5.012239 ACACTTTCATCCTTGCATACATGT 58.988 37.500 2.69 2.69 0.00 3.21
7679 17617 5.571784 ACACTTTCATCCTTGCATACATG 57.428 39.130 0.00 0.00 0.00 3.21
7680 17618 6.830324 ACATACACTTTCATCCTTGCATACAT 59.170 34.615 0.00 0.00 0.00 2.29
7681 17619 6.093909 CACATACACTTTCATCCTTGCATACA 59.906 38.462 0.00 0.00 0.00 2.29
7682 17620 6.316140 TCACATACACTTTCATCCTTGCATAC 59.684 38.462 0.00 0.00 0.00 2.39
7683 17621 6.413892 TCACATACACTTTCATCCTTGCATA 58.586 36.000 0.00 0.00 0.00 3.14
7684 17622 5.255687 TCACATACACTTTCATCCTTGCAT 58.744 37.500 0.00 0.00 0.00 3.96
7685 17623 4.650734 TCACATACACTTTCATCCTTGCA 58.349 39.130 0.00 0.00 0.00 4.08
7686 17624 5.627499 TTCACATACACTTTCATCCTTGC 57.373 39.130 0.00 0.00 0.00 4.01
7687 17625 6.969366 TGTTTCACATACACTTTCATCCTTG 58.031 36.000 0.00 0.00 0.00 3.61
7688 17626 7.765695 ATGTTTCACATACACTTTCATCCTT 57.234 32.000 0.00 0.00 36.99 3.36
7689 17627 7.765695 AATGTTTCACATACACTTTCATCCT 57.234 32.000 0.00 0.00 37.97 3.24
7690 17628 8.081633 TGAAATGTTTCACATACACTTTCATCC 58.918 33.333 4.16 0.00 41.88 3.51
7691 17629 9.121517 CTGAAATGTTTCACATACACTTTCATC 57.878 33.333 4.16 0.00 41.88 2.92
7692 17630 8.084073 CCTGAAATGTTTCACATACACTTTCAT 58.916 33.333 4.16 0.00 41.88 2.57
7693 17631 7.284261 TCCTGAAATGTTTCACATACACTTTCA 59.716 33.333 4.16 0.00 41.88 2.69
7694 17632 7.648142 TCCTGAAATGTTTCACATACACTTTC 58.352 34.615 4.16 0.00 41.88 2.62
7695 17633 7.581213 TCCTGAAATGTTTCACATACACTTT 57.419 32.000 4.16 0.00 41.88 2.66
7696 17634 7.448161 TCATCCTGAAATGTTTCACATACACTT 59.552 33.333 4.16 0.00 41.88 3.16
7697 17635 6.942005 TCATCCTGAAATGTTTCACATACACT 59.058 34.615 4.16 0.00 41.88 3.55
7698 17636 7.144722 TCATCCTGAAATGTTTCACATACAC 57.855 36.000 4.16 0.00 41.88 2.90
7699 17637 7.757941 TTCATCCTGAAATGTTTCACATACA 57.242 32.000 4.16 0.00 41.88 2.29
7713 17651 9.527157 TCACAATTTAAGGTATTTCATCCTGAA 57.473 29.630 0.00 0.00 34.03 3.02
7714 17652 9.177608 CTCACAATTTAAGGTATTTCATCCTGA 57.822 33.333 0.00 0.00 33.97 3.86
7715 17653 7.917505 GCTCACAATTTAAGGTATTTCATCCTG 59.082 37.037 0.00 0.00 33.97 3.86
7716 17654 7.836183 AGCTCACAATTTAAGGTATTTCATCCT 59.164 33.333 0.00 0.00 35.34 3.24
7717 17655 7.917505 CAGCTCACAATTTAAGGTATTTCATCC 59.082 37.037 0.00 0.00 0.00 3.51
7718 17656 7.433425 GCAGCTCACAATTTAAGGTATTTCATC 59.567 37.037 0.00 0.00 0.00 2.92
7719 17657 7.093814 TGCAGCTCACAATTTAAGGTATTTCAT 60.094 33.333 0.00 0.00 0.00 2.57
7720 17658 6.208402 TGCAGCTCACAATTTAAGGTATTTCA 59.792 34.615 0.00 0.00 0.00 2.69
7721 17659 6.528072 GTGCAGCTCACAATTTAAGGTATTTC 59.472 38.462 10.30 0.00 44.98 2.17
7722 17660 6.389906 GTGCAGCTCACAATTTAAGGTATTT 58.610 36.000 10.30 0.00 44.98 1.40
7723 17661 5.954335 GTGCAGCTCACAATTTAAGGTATT 58.046 37.500 10.30 0.00 44.98 1.89
7724 17662 5.567138 GTGCAGCTCACAATTTAAGGTAT 57.433 39.130 10.30 0.00 44.98 2.73
7726 17664 3.923017 GTGCAGCTCACAATTTAAGGT 57.077 42.857 10.30 0.00 44.98 3.50
7756 17694 9.554395 TGTACTGTTCATCTTTAAAGTCAATGA 57.446 29.630 14.74 13.14 0.00 2.57
7761 17699 9.922305 GCATATGTACTGTTCATCTTTAAAGTC 57.078 33.333 14.74 3.45 0.00 3.01
7762 17700 9.672673 AGCATATGTACTGTTCATCTTTAAAGT 57.327 29.630 14.74 0.22 0.00 2.66
7768 17706 8.616076 GCTTTTAGCATATGTACTGTTCATCTT 58.384 33.333 4.29 0.00 41.89 2.40
7769 17707 7.227512 GGCTTTTAGCATATGTACTGTTCATCT 59.772 37.037 4.29 0.00 44.75 2.90
7770 17708 7.355778 GGCTTTTAGCATATGTACTGTTCATC 58.644 38.462 4.29 0.00 44.75 2.92
7771 17709 6.263168 GGGCTTTTAGCATATGTACTGTTCAT 59.737 38.462 4.29 5.26 44.75 2.57
7772 17710 5.588648 GGGCTTTTAGCATATGTACTGTTCA 59.411 40.000 4.29 0.00 44.75 3.18
7773 17711 5.008712 GGGGCTTTTAGCATATGTACTGTTC 59.991 44.000 4.29 0.00 44.75 3.18
7774 17712 4.887655 GGGGCTTTTAGCATATGTACTGTT 59.112 41.667 4.29 0.00 44.75 3.16
7775 17713 4.080015 TGGGGCTTTTAGCATATGTACTGT 60.080 41.667 4.29 0.00 44.75 3.55
7776 17714 4.460263 TGGGGCTTTTAGCATATGTACTG 58.540 43.478 4.29 0.00 44.75 2.74
7777 17715 4.412199 TCTGGGGCTTTTAGCATATGTACT 59.588 41.667 4.29 0.00 44.75 2.73
7778 17716 4.714632 TCTGGGGCTTTTAGCATATGTAC 58.285 43.478 4.29 0.00 44.75 2.90
7779 17717 5.582950 ATCTGGGGCTTTTAGCATATGTA 57.417 39.130 4.29 0.00 44.75 2.29
7780 17718 3.951563 TCTGGGGCTTTTAGCATATGT 57.048 42.857 4.29 0.00 44.75 2.29
7781 17719 5.069516 ACAAATCTGGGGCTTTTAGCATATG 59.930 40.000 0.00 0.00 44.75 1.78
7782 17720 5.211201 ACAAATCTGGGGCTTTTAGCATAT 58.789 37.500 0.67 0.00 44.75 1.78
7783 17721 4.609301 ACAAATCTGGGGCTTTTAGCATA 58.391 39.130 0.67 0.00 44.75 3.14
7784 17722 3.444029 ACAAATCTGGGGCTTTTAGCAT 58.556 40.909 0.67 0.00 44.75 3.79
7785 17723 2.825532 GACAAATCTGGGGCTTTTAGCA 59.174 45.455 0.67 0.00 44.75 3.49
7786 17724 3.092301 AGACAAATCTGGGGCTTTTAGC 58.908 45.455 0.00 0.00 35.33 3.09
7787 17725 5.728637 AAAGACAAATCTGGGGCTTTTAG 57.271 39.130 0.00 0.00 34.48 1.85
7788 17726 6.493189 AAAAAGACAAATCTGGGGCTTTTA 57.507 33.333 5.72 0.00 34.38 1.52
7789 17727 5.372343 AAAAAGACAAATCTGGGGCTTTT 57.628 34.783 0.00 0.00 35.69 2.27
7813 17751 6.657836 AATACATTAAACCGTGAGCTACAC 57.342 37.500 6.31 6.31 45.11 2.90
7814 17752 6.035220 CGAAATACATTAAACCGTGAGCTACA 59.965 38.462 0.00 0.00 0.00 2.74
7815 17753 6.254157 TCGAAATACATTAAACCGTGAGCTAC 59.746 38.462 0.00 0.00 0.00 3.58
7816 17754 6.254157 GTCGAAATACATTAAACCGTGAGCTA 59.746 38.462 0.00 0.00 0.00 3.32
7817 17755 5.063060 GTCGAAATACATTAAACCGTGAGCT 59.937 40.000 0.00 0.00 0.00 4.09
7818 17756 5.253335 GTCGAAATACATTAAACCGTGAGC 58.747 41.667 0.00 0.00 0.00 4.26
7819 17757 5.579511 AGGTCGAAATACATTAAACCGTGAG 59.420 40.000 0.00 0.00 33.11 3.51
7820 17758 5.349270 CAGGTCGAAATACATTAAACCGTGA 59.651 40.000 0.00 0.00 33.11 4.35
7821 17759 5.349270 TCAGGTCGAAATACATTAAACCGTG 59.651 40.000 0.00 0.00 33.11 4.94
7822 17760 5.481105 TCAGGTCGAAATACATTAAACCGT 58.519 37.500 0.00 0.00 33.11 4.83
7823 17761 6.411630 TTCAGGTCGAAATACATTAAACCG 57.588 37.500 0.00 0.00 33.11 4.44
7824 17762 9.634163 AATTTTCAGGTCGAAATACATTAAACC 57.366 29.630 0.00 0.00 43.12 3.27
7827 17765 9.134734 GCAAATTTTCAGGTCGAAATACATTAA 57.865 29.630 0.00 0.00 43.12 1.40
7828 17766 8.300286 TGCAAATTTTCAGGTCGAAATACATTA 58.700 29.630 0.00 0.00 43.12 1.90
7829 17767 7.116233 GTGCAAATTTTCAGGTCGAAATACATT 59.884 33.333 0.00 0.00 43.12 2.71
7830 17768 6.586082 GTGCAAATTTTCAGGTCGAAATACAT 59.414 34.615 0.00 0.00 43.12 2.29
7831 17769 5.918011 GTGCAAATTTTCAGGTCGAAATACA 59.082 36.000 0.00 0.00 43.12 2.29
7832 17770 5.918011 TGTGCAAATTTTCAGGTCGAAATAC 59.082 36.000 0.00 0.00 43.12 1.89
7833 17771 5.918011 GTGTGCAAATTTTCAGGTCGAAATA 59.082 36.000 0.00 0.00 43.12 1.40
7834 17772 4.744631 GTGTGCAAATTTTCAGGTCGAAAT 59.255 37.500 0.00 0.00 43.12 2.17
7835 17773 4.109050 GTGTGCAAATTTTCAGGTCGAAA 58.891 39.130 0.00 0.00 41.95 3.46
7836 17774 3.701241 GTGTGCAAATTTTCAGGTCGAA 58.299 40.909 0.00 0.00 0.00 3.71
7837 17775 2.286713 CGTGTGCAAATTTTCAGGTCGA 60.287 45.455 0.00 0.00 0.00 4.20
7838 17776 2.043411 CGTGTGCAAATTTTCAGGTCG 58.957 47.619 0.00 0.00 0.00 4.79
7839 17777 2.788786 CACGTGTGCAAATTTTCAGGTC 59.211 45.455 7.58 0.00 0.00 3.85
7840 17778 2.165437 ACACGTGTGCAAATTTTCAGGT 59.835 40.909 22.71 0.00 0.00 4.00
7841 17779 2.808244 ACACGTGTGCAAATTTTCAGG 58.192 42.857 22.71 0.00 0.00 3.86
7842 17780 4.346970 TGTACACGTGTGCAAATTTTCAG 58.653 39.130 32.87 0.00 37.70 3.02
7843 17781 4.357018 TGTACACGTGTGCAAATTTTCA 57.643 36.364 32.87 10.71 37.70 2.69
7844 17782 5.881637 AATGTACACGTGTGCAAATTTTC 57.118 34.783 36.85 14.05 43.49 2.29
7845 17783 6.920758 ACATAATGTACACGTGTGCAAATTTT 59.079 30.769 36.85 28.36 43.49 1.82
7846 17784 6.442952 ACATAATGTACACGTGTGCAAATTT 58.557 32.000 36.85 28.66 43.49 1.82
7847 17785 6.007936 ACATAATGTACACGTGTGCAAATT 57.992 33.333 36.85 29.27 43.49 1.82
7848 17786 5.621197 ACATAATGTACACGTGTGCAAAT 57.379 34.783 36.85 29.18 43.49 2.32
7849 17787 6.592220 AGATACATAATGTACACGTGTGCAAA 59.408 34.615 36.85 28.45 43.49 3.68
7850 17788 6.103330 AGATACATAATGTACACGTGTGCAA 58.897 36.000 36.85 24.91 43.49 4.08
7851 17789 5.656480 AGATACATAATGTACACGTGTGCA 58.344 37.500 35.74 35.74 44.32 4.57
7852 17790 6.362551 CCTAGATACATAATGTACACGTGTGC 59.637 42.308 30.83 28.95 35.42 4.57
7853 17791 7.423199 ACCTAGATACATAATGTACACGTGTG 58.577 38.462 30.83 14.57 35.42 3.82
7854 17792 7.578310 ACCTAGATACATAATGTACACGTGT 57.422 36.000 26.52 26.52 35.42 4.49
7902 17840 9.952188 AAAATTCAAACTTTTCGGTTTCAAAAA 57.048 22.222 0.00 0.00 37.32 1.94
7903 17841 9.387123 CAAAATTCAAACTTTTCGGTTTCAAAA 57.613 25.926 0.00 0.00 37.32 2.44
7904 17842 8.774586 TCAAAATTCAAACTTTTCGGTTTCAAA 58.225 25.926 0.00 0.00 37.32 2.69
7905 17843 8.311650 TCAAAATTCAAACTTTTCGGTTTCAA 57.688 26.923 0.00 0.00 37.32 2.69
7906 17844 7.891183 TCAAAATTCAAACTTTTCGGTTTCA 57.109 28.000 0.00 0.00 37.32 2.69
7907 17845 8.440059 ACTTCAAAATTCAAACTTTTCGGTTTC 58.560 29.630 0.00 0.00 37.32 2.78
7908 17846 8.317891 ACTTCAAAATTCAAACTTTTCGGTTT 57.682 26.923 0.00 0.00 39.62 3.27
7909 17847 7.899178 ACTTCAAAATTCAAACTTTTCGGTT 57.101 28.000 0.00 0.00 0.00 4.44
7910 17848 7.817478 AGAACTTCAAAATTCAAACTTTTCGGT 59.183 29.630 0.00 0.00 0.00 4.69
7911 17849 8.185003 AGAACTTCAAAATTCAAACTTTTCGG 57.815 30.769 0.00 0.00 0.00 4.30
7912 17850 8.859156 TGAGAACTTCAAAATTCAAACTTTTCG 58.141 29.630 0.00 0.00 31.34 3.46
7926 17864 8.919145 TAAAGGCCTTTATTTGAGAACTTCAAA 58.081 29.630 30.16 7.50 44.18 2.69
7927 17865 6.976934 AAGGCCTTTATTTGAGAACTTCAA 57.023 33.333 13.78 0.00 43.92 2.69
7928 17866 6.976934 AAAGGCCTTTATTTGAGAACTTCA 57.023 33.333 29.47 0.00 0.00 3.02
7929 17867 7.976175 CCATAAAGGCCTTTATTTGAGAACTTC 59.024 37.037 37.39 0.00 42.11 3.01
7930 17868 7.673926 TCCATAAAGGCCTTTATTTGAGAACTT 59.326 33.333 37.39 18.43 42.11 2.66
7931 17869 7.182060 TCCATAAAGGCCTTTATTTGAGAACT 58.818 34.615 37.39 19.07 42.11 3.01
7932 17870 7.404671 TCCATAAAGGCCTTTATTTGAGAAC 57.595 36.000 37.39 0.00 42.11 3.01
7933 17871 6.096846 GCTCCATAAAGGCCTTTATTTGAGAA 59.903 38.462 40.92 26.10 42.11 2.87
7934 17872 5.594317 GCTCCATAAAGGCCTTTATTTGAGA 59.406 40.000 40.92 32.58 42.11 3.27
7935 17873 5.595952 AGCTCCATAAAGGCCTTTATTTGAG 59.404 40.000 37.34 37.34 42.11 3.02
7936 17874 5.518865 AGCTCCATAAAGGCCTTTATTTGA 58.481 37.500 37.39 32.48 42.11 2.69
7937 17875 5.506317 CGAGCTCCATAAAGGCCTTTATTTG 60.506 44.000 37.39 30.85 42.11 2.32
7938 17876 4.580580 CGAGCTCCATAAAGGCCTTTATTT 59.419 41.667 37.39 22.94 42.11 1.40
7939 17877 4.137543 CGAGCTCCATAAAGGCCTTTATT 58.862 43.478 37.39 26.77 42.11 1.40
7940 17878 3.496870 CCGAGCTCCATAAAGGCCTTTAT 60.497 47.826 35.31 35.31 44.11 1.40
7941 17879 2.158813 CCGAGCTCCATAAAGGCCTTTA 60.159 50.000 34.29 34.29 39.12 1.85
7942 17880 1.408822 CCGAGCTCCATAAAGGCCTTT 60.409 52.381 32.37 32.37 37.29 3.11
7943 17881 0.181350 CCGAGCTCCATAAAGGCCTT 59.819 55.000 13.78 13.78 37.29 4.35
7944 17882 0.983378 ACCGAGCTCCATAAAGGCCT 60.983 55.000 8.47 0.00 37.29 5.19
7945 17883 0.533085 GACCGAGCTCCATAAAGGCC 60.533 60.000 8.47 0.00 37.29 5.19
7946 17884 0.466124 AGACCGAGCTCCATAAAGGC 59.534 55.000 8.47 0.00 37.29 4.35
7947 17885 2.517650 GAGACCGAGCTCCATAAAGG 57.482 55.000 8.47 4.75 39.47 3.11
7961 17899 1.401018 CGAAAATGCCAAACGGAGACC 60.401 52.381 0.00 0.00 0.00 3.85
7962 17900 1.265905 ACGAAAATGCCAAACGGAGAC 59.734 47.619 0.00 0.00 0.00 3.36
7963 17901 1.600023 ACGAAAATGCCAAACGGAGA 58.400 45.000 0.00 0.00 0.00 3.71
7964 17902 2.415697 AACGAAAATGCCAAACGGAG 57.584 45.000 0.00 0.00 0.00 4.63
7965 17903 2.873133 AAACGAAAATGCCAAACGGA 57.127 40.000 0.00 0.00 0.00 4.69
7966 17904 6.033091 GTCTAATAAACGAAAATGCCAAACGG 59.967 38.462 0.00 0.00 0.00 4.44
7967 17905 6.579292 TGTCTAATAAACGAAAATGCCAAACG 59.421 34.615 0.00 0.00 0.00 3.60
7968 17906 7.593644 ACTGTCTAATAAACGAAAATGCCAAAC 59.406 33.333 0.00 0.00 0.00 2.93
7969 17907 7.653647 ACTGTCTAATAAACGAAAATGCCAAA 58.346 30.769 0.00 0.00 0.00 3.28
7970 17908 7.209471 ACTGTCTAATAAACGAAAATGCCAA 57.791 32.000 0.00 0.00 0.00 4.52
7971 17909 6.811253 ACTGTCTAATAAACGAAAATGCCA 57.189 33.333 0.00 0.00 0.00 4.92
7972 17910 8.827677 AGATACTGTCTAATAAACGAAAATGCC 58.172 33.333 0.00 0.00 34.69 4.40
7992 17930 9.976776 TGGACTAAGGATATCGATTAAGATACT 57.023 33.333 1.71 0.00 36.10 2.12
7995 17933 8.200792 GCATGGACTAAGGATATCGATTAAGAT 58.799 37.037 1.71 0.00 34.79 2.40
7996 17934 7.178451 TGCATGGACTAAGGATATCGATTAAGA 59.822 37.037 1.71 0.00 0.00 2.10
7997 17935 7.276658 GTGCATGGACTAAGGATATCGATTAAG 59.723 40.741 10.51 0.00 0.00 1.85
7998 17936 7.039011 AGTGCATGGACTAAGGATATCGATTAA 60.039 37.037 19.35 0.00 0.00 1.40
7999 17937 6.437477 AGTGCATGGACTAAGGATATCGATTA 59.563 38.462 19.35 0.00 0.00 1.75
8000 17938 5.247110 AGTGCATGGACTAAGGATATCGATT 59.753 40.000 19.35 0.00 0.00 3.34
8001 17939 4.774726 AGTGCATGGACTAAGGATATCGAT 59.225 41.667 19.35 2.16 0.00 3.59
8002 17940 4.152647 AGTGCATGGACTAAGGATATCGA 58.847 43.478 19.35 0.00 0.00 3.59
8008 17946 5.692115 TGATAAAGTGCATGGACTAAGGA 57.308 39.130 21.06 6.59 0.00 3.36
8017 17955 7.354025 TGCATTTCTTTTGATAAAGTGCATG 57.646 32.000 9.12 0.00 41.77 4.06
8019 17957 8.306038 AGTATGCATTTCTTTTGATAAAGTGCA 58.694 29.630 3.54 13.27 46.16 4.57
8034 17972 7.253422 AGCACAACAATTAGAGTATGCATTTC 58.747 34.615 3.54 3.45 34.27 2.17
8038 17976 6.406370 AGTAGCACAACAATTAGAGTATGCA 58.594 36.000 0.00 0.00 34.27 3.96
8055 17993 5.066117 GGCTCCAAACCTTTATAAGTAGCAC 59.934 44.000 0.00 0.00 0.00 4.40
8060 17998 5.254115 GACTGGCTCCAAACCTTTATAAGT 58.746 41.667 0.00 0.00 0.00 2.24
8062 18000 4.291249 AGGACTGGCTCCAAACCTTTATAA 59.709 41.667 7.44 0.00 42.46 0.98
8065 18003 2.062636 AGGACTGGCTCCAAACCTTTA 58.937 47.619 7.44 0.00 42.46 1.85
8066 18004 0.853530 AGGACTGGCTCCAAACCTTT 59.146 50.000 7.44 0.00 42.46 3.11
8119 18066 3.241067 ACCATAACACGAGCATTACGT 57.759 42.857 0.00 0.00 44.83 3.57
8123 18070 9.151471 GTATATATCAACCATAACACGAGCATT 57.849 33.333 0.00 0.00 0.00 3.56
8142 18089 4.221703 GGAGGACAGCAGCACAGTATATAT 59.778 45.833 0.00 0.00 0.00 0.86
8150 18097 2.848679 TGGGAGGACAGCAGCACA 60.849 61.111 0.00 0.00 0.00 4.57
8155 18102 1.623811 GAAGTTACTGGGAGGACAGCA 59.376 52.381 0.00 0.00 42.21 4.41
8196 18143 4.640364 TCAGGCGATAATATGTGCATCAA 58.360 39.130 0.00 0.00 0.00 2.57
8200 18147 6.389830 AAAAATCAGGCGATAATATGTGCA 57.610 33.333 0.00 0.00 0.00 4.57
8201 18148 8.795786 TTTAAAAATCAGGCGATAATATGTGC 57.204 30.769 0.00 0.00 0.00 4.57
8210 18157 7.823745 ACCTCATATTTAAAAATCAGGCGAT 57.176 32.000 0.00 0.00 0.00 4.58
8226 18174 9.466497 ACATTATGTTGAAACTGAACCTCATAT 57.534 29.630 0.00 0.00 0.00 1.78
8251 18199 8.371770 AGAGCTTTCGATGGATTTAAGAATAC 57.628 34.615 0.00 0.00 0.00 1.89
8258 18206 9.832445 ACTTAAATAGAGCTTTCGATGGATTTA 57.168 29.630 0.00 0.00 0.00 1.40
8264 18212 8.190888 ACTGAACTTAAATAGAGCTTTCGATG 57.809 34.615 0.00 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.