Multiple sequence alignment - TraesCS3A01G059800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G059800 chr3A 100.000 2259 0 0 1 2259 36229190 36226932 0.000000e+00 4172.0
1 TraesCS3A01G059800 chr3A 84.779 565 39 25 253 779 36191930 36191375 7.150000e-145 523.0
2 TraesCS3A01G059800 chr3A 82.507 383 43 14 963 1323 36191171 36190791 4.680000e-82 315.0
3 TraesCS3A01G059800 chr3D 87.021 809 44 28 1 779 26261046 26261823 0.000000e+00 856.0
4 TraesCS3A01G059800 chr3D 79.342 760 74 39 253 965 26211149 26210426 7.350000e-125 457.0
5 TraesCS3A01G059800 chr3D 83.298 473 51 12 1407 1855 26213859 26213391 5.810000e-111 411.0
6 TraesCS3A01G059800 chr3D 81.621 506 48 20 1326 1793 26209880 26209382 5.890000e-101 377.0
7 TraesCS3A01G059800 chr3D 83.951 405 30 14 1038 1412 26210306 26209907 2.760000e-94 355.0
8 TraesCS3A01G059800 chr3D 82.232 439 39 13 963 1365 26262031 26262466 2.150000e-90 342.0
9 TraesCS3A01G059800 chr3D 92.670 191 13 1 1851 2041 26213212 26213023 7.950000e-70 274.0
10 TraesCS3A01G059800 chr3D 82.320 181 18 8 796 965 26261811 26261988 6.500000e-31 145.0
11 TraesCS3A01G059800 chr3D 80.576 139 25 1 1872 2008 164398428 164398566 3.070000e-19 106.0
12 TraesCS3A01G059800 chr3B 94.409 465 16 7 4 459 43736577 43736114 0.000000e+00 706.0
13 TraesCS3A01G059800 chr3B 92.157 153 12 0 627 779 43735803 43735651 1.360000e-52 217.0
14 TraesCS3A01G059800 chr3B 78.028 355 62 6 963 1303 43735444 43735092 2.270000e-50 209.0
15 TraesCS3A01G059800 chr3B 89.571 163 11 6 1880 2041 658461453 658461296 3.800000e-48 202.0
16 TraesCS3A01G059800 chr3B 82.353 204 27 5 1610 1804 43734539 43734336 3.860000e-38 169.0
17 TraesCS3A01G059800 chr3B 82.778 180 18 8 796 965 43735663 43735487 5.030000e-32 148.0
18 TraesCS3A01G059800 chr4A 95.890 219 9 0 2037 2255 640236064 640235846 2.760000e-94 355.0
19 TraesCS3A01G059800 chr5A 94.977 219 11 0 2037 2255 483329625 483329843 5.970000e-91 344.0
20 TraesCS3A01G059800 chr5A 93.722 223 14 0 2037 2259 673705760 673705538 3.600000e-88 335.0
21 TraesCS3A01G059800 chr5A 87.912 91 11 0 1918 2008 631309972 631309882 8.530000e-20 108.0
22 TraesCS3A01G059800 chr7A 94.570 221 12 0 2035 2255 129261359 129261579 2.150000e-90 342.0
23 TraesCS3A01G059800 chr7A 94.521 219 12 0 2037 2255 401405379 401405161 2.780000e-89 339.0
24 TraesCS3A01G059800 chr7A 93.722 223 14 0 2037 2259 492343060 492342838 3.600000e-88 335.0
25 TraesCS3A01G059800 chr7A 87.500 80 10 0 1929 2008 592200578 592200499 2.390000e-15 93.5
26 TraesCS3A01G059800 chr6A 94.170 223 13 0 2033 2255 459511747 459511969 7.730000e-90 340.0
27 TraesCS3A01G059800 chr6A 94.170 223 13 0 2037 2259 606612049 606611827 7.730000e-90 340.0
28 TraesCS3A01G059800 chr6A 87.879 66 8 0 1943 2008 94264219 94264284 6.690000e-11 78.7
29 TraesCS3A01G059800 chr2A 94.521 219 12 0 2037 2255 27936341 27936559 2.780000e-89 339.0
30 TraesCS3A01G059800 chr6B 88.535 157 12 6 1884 2037 719234437 719234590 3.830000e-43 185.0
31 TraesCS3A01G059800 chrUn 86.624 157 13 6 1884 2037 62885216 62885367 1.390000e-37 167.0
32 TraesCS3A01G059800 chr2D 87.324 71 9 0 1943 2013 38479906 38479836 5.170000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G059800 chr3A 36226932 36229190 2258 True 4172.000000 4172 100.000000 1 2259 1 chr3A.!!$R1 2258
1 TraesCS3A01G059800 chr3A 36190791 36191930 1139 True 419.000000 523 83.643000 253 1323 2 chr3A.!!$R2 1070
2 TraesCS3A01G059800 chr3D 26261046 26262466 1420 False 447.666667 856 83.857667 1 1365 3 chr3D.!!$F2 1364
3 TraesCS3A01G059800 chr3D 26209382 26213859 4477 True 374.800000 457 84.176400 253 2041 5 chr3D.!!$R1 1788
4 TraesCS3A01G059800 chr3B 43734336 43736577 2241 True 289.800000 706 85.945000 4 1804 5 chr3B.!!$R2 1800

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 3598 0.652592 CTAATCCAGTTCGCAAGCCG 59.347 55.0 0.0 0.0 38.61 5.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1838 4948 0.104934 GGCCCCAGAGGAGATTAGGA 60.105 60.0 0.0 0.0 38.24 2.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.645838 TGAAGAAGTTTGAGCAGGCT 57.354 45.000 0.00 0.00 0.00 4.58
170 185 1.678970 GCAATATCATCCCCCGCCC 60.679 63.158 0.00 0.00 0.00 6.13
187 202 1.079543 CCACTCTGTGCGGAGGAAG 60.080 63.158 12.12 2.66 37.63 3.46
312 2775 6.318648 TGTGTTATTATTAAGCAAGGCCAGAG 59.681 38.462 5.01 0.00 0.00 3.35
352 2815 6.085979 CGAGAACTTTACTACACTGTTGTACG 59.914 42.308 3.31 1.78 37.15 3.67
420 2885 3.320626 CTGATTGTCATGTGTCGTGTCT 58.679 45.455 0.00 0.00 0.00 3.41
515 3130 9.391006 GTCTACCAGACATAGGATTAGAGATAG 57.609 40.741 1.46 0.00 44.45 2.08
516 3131 9.118367 TCTACCAGACATAGGATTAGAGATAGT 57.882 37.037 0.00 0.00 0.00 2.12
573 3197 7.814587 GTCCTAATTTGAAGCTTTGCTAACAAT 59.185 33.333 0.00 0.00 38.25 2.71
574 3198 8.367156 TCCTAATTTGAAGCTTTGCTAACAATT 58.633 29.630 0.00 1.31 38.25 2.32
576 3200 5.655893 TTTGAAGCTTTGCTAACAATTGC 57.344 34.783 5.05 0.00 38.25 3.56
578 3202 3.243367 TGAAGCTTTGCTAACAATTGCGT 60.243 39.130 5.05 0.00 38.25 5.24
582 3206 6.189677 AGCTTTGCTAACAATTGCGTATAA 57.810 33.333 5.05 0.00 39.26 0.98
590 3215 6.687105 GCTAACAATTGCGTATAAGAAACAGG 59.313 38.462 5.05 0.00 0.00 4.00
591 3216 6.811253 AACAATTGCGTATAAGAAACAGGA 57.189 33.333 5.05 0.00 0.00 3.86
601 3226 6.537301 CGTATAAGAAACAGGAAGGCATAACA 59.463 38.462 0.00 0.00 0.00 2.41
647 3287 3.930229 GGTCCTTTGTTTTCAAACCACAC 59.070 43.478 0.00 0.00 43.72 3.82
662 3306 8.958119 TCAAACCACACCTCTGTATTATATTC 57.042 34.615 0.00 0.00 0.00 1.75
713 3357 6.070824 ACCAGAACCAACAGATTTGTTCTTTT 60.071 34.615 0.00 0.00 44.40 2.27
766 3414 5.738619 TTCCATACCTGTCGCATACATAT 57.261 39.130 0.00 0.00 37.50 1.78
767 3415 5.072040 TCCATACCTGTCGCATACATATG 57.928 43.478 0.00 0.00 37.50 1.78
768 3416 4.770010 TCCATACCTGTCGCATACATATGA 59.230 41.667 10.38 0.00 34.82 2.15
769 3417 5.245075 TCCATACCTGTCGCATACATATGAA 59.755 40.000 10.38 0.00 34.82 2.57
770 3418 5.931724 CCATACCTGTCGCATACATATGAAA 59.068 40.000 10.38 0.00 34.82 2.69
771 3419 6.595326 CCATACCTGTCGCATACATATGAAAT 59.405 38.462 10.38 0.00 34.82 2.17
772 3420 7.119699 CCATACCTGTCGCATACATATGAAATT 59.880 37.037 10.38 0.00 34.82 1.82
773 3421 6.304356 ACCTGTCGCATACATATGAAATTG 57.696 37.500 10.38 2.51 37.50 2.32
774 3422 5.149273 CCTGTCGCATACATATGAAATTGC 58.851 41.667 10.38 10.98 37.50 3.56
775 3423 5.277925 CCTGTCGCATACATATGAAATTGCA 60.278 40.000 10.38 0.00 37.50 4.08
776 3424 6.316440 TGTCGCATACATATGAAATTGCAT 57.684 33.333 10.38 3.88 35.75 3.96
777 3425 6.372981 TGTCGCATACATATGAAATTGCATC 58.627 36.000 10.38 8.41 35.75 3.91
778 3426 6.205270 TGTCGCATACATATGAAATTGCATCT 59.795 34.615 10.38 0.00 35.75 2.90
779 3427 6.522165 GTCGCATACATATGAAATTGCATCTG 59.478 38.462 10.38 6.21 35.75 2.90
780 3428 6.427547 TCGCATACATATGAAATTGCATCTGA 59.572 34.615 16.63 3.48 35.75 3.27
781 3429 7.120138 TCGCATACATATGAAATTGCATCTGAT 59.880 33.333 16.63 5.30 35.75 2.90
782 3430 7.753580 CGCATACATATGAAATTGCATCTGATT 59.246 33.333 16.63 3.07 35.75 2.57
840 3492 2.267174 AGTGCAGACATCAACTTGCT 57.733 45.000 0.00 0.00 0.00 3.91
858 3511 5.916883 ACTTGCTCTCACAAAATTCATTTCG 59.083 36.000 0.00 0.00 0.00 3.46
859 3512 5.437289 TGCTCTCACAAAATTCATTTCGT 57.563 34.783 0.00 0.00 0.00 3.85
862 3515 5.914635 GCTCTCACAAAATTCATTTCGTCAA 59.085 36.000 0.00 0.00 0.00 3.18
867 3520 6.690957 TCACAAAATTCATTTCGTCAACAGAC 59.309 34.615 0.00 0.00 0.00 3.51
890 3548 0.683828 TGCAACCCATCGCCATCATT 60.684 50.000 0.00 0.00 0.00 2.57
895 3553 3.726557 ACCCATCGCCATCATTATCAT 57.273 42.857 0.00 0.00 0.00 2.45
897 3555 3.009363 ACCCATCGCCATCATTATCATCA 59.991 43.478 0.00 0.00 0.00 3.07
898 3556 3.376234 CCCATCGCCATCATTATCATCAC 59.624 47.826 0.00 0.00 0.00 3.06
899 3557 3.063045 CCATCGCCATCATTATCATCACG 59.937 47.826 0.00 0.00 0.00 4.35
900 3558 3.658757 TCGCCATCATTATCATCACGA 57.341 42.857 0.00 0.00 0.00 4.35
901 3559 3.578688 TCGCCATCATTATCATCACGAG 58.421 45.455 0.00 0.00 0.00 4.18
902 3560 3.005791 TCGCCATCATTATCATCACGAGT 59.994 43.478 0.00 0.00 0.00 4.18
903 3561 3.122445 CGCCATCATTATCATCACGAGTG 59.878 47.826 0.00 0.00 0.00 3.51
904 3562 4.060900 GCCATCATTATCATCACGAGTGT 58.939 43.478 2.97 0.00 0.00 3.55
923 3584 4.082679 AGTGTGTCCTCTCGTTGACTAATC 60.083 45.833 0.00 0.00 32.67 1.75
929 3590 4.158025 TCCTCTCGTTGACTAATCCAGTTC 59.842 45.833 0.00 0.00 37.72 3.01
936 3597 1.666189 GACTAATCCAGTTCGCAAGCC 59.334 52.381 0.00 0.00 37.72 4.35
937 3598 0.652592 CTAATCCAGTTCGCAAGCCG 59.347 55.000 0.00 0.00 38.61 5.52
991 3707 9.594478 GTTTATAAACCCCCATAAAACAATCTG 57.406 33.333 16.14 0.00 30.56 2.90
999 3715 4.381932 CCCATAAAACAATCTGTTGCCTCC 60.382 45.833 0.00 0.00 40.14 4.30
1012 3728 0.625849 TGCCTCCATCCTTTCCTTCC 59.374 55.000 0.00 0.00 0.00 3.46
1014 3730 0.912486 CCTCCATCCTTTCCTTCCGT 59.088 55.000 0.00 0.00 0.00 4.69
1019 3735 2.211468 ATCCTTTCCTTCCGTGCCCC 62.211 60.000 0.00 0.00 0.00 5.80
1027 3743 1.420138 CCTTCCGTGCCCCTATACAAT 59.580 52.381 0.00 0.00 0.00 2.71
1035 3762 4.134563 GTGCCCCTATACAATACACAAGG 58.865 47.826 0.00 0.00 0.00 3.61
1036 3763 4.041464 TGCCCCTATACAATACACAAGGA 58.959 43.478 0.00 0.00 0.00 3.36
1087 3814 0.691078 GGCCATCCTCCTCCACTACA 60.691 60.000 0.00 0.00 0.00 2.74
1088 3815 1.428869 GCCATCCTCCTCCACTACAT 58.571 55.000 0.00 0.00 0.00 2.29
1092 3819 2.054232 TCCTCCTCCACTACATCGAC 57.946 55.000 0.00 0.00 0.00 4.20
1152 3885 1.215382 CGACTCGCCATCAACCTCA 59.785 57.895 0.00 0.00 0.00 3.86
1157 3890 2.100631 CGCCATCAACCTCACGGTC 61.101 63.158 0.00 0.00 44.73 4.79
1161 3894 1.762957 CCATCAACCTCACGGTCCTAT 59.237 52.381 0.00 0.00 44.73 2.57
1224 3957 3.961414 TTCGCCCCCACTTGTCCC 61.961 66.667 0.00 0.00 0.00 4.46
1231 3967 4.641645 CCACTTGTCCCGCCAGCA 62.642 66.667 0.00 0.00 0.00 4.41
1252 3988 4.457496 ACGCGCTCCTGTGATGGG 62.457 66.667 5.73 0.00 0.00 4.00
1254 3990 2.268920 GCGCTCCTGTGATGGGAA 59.731 61.111 0.00 0.00 31.92 3.97
1263 3999 5.280676 GCTCCTGTGATGGGAATAATGGATA 60.281 44.000 0.00 0.00 31.92 2.59
1286 4022 0.824759 ATCTTCTCTCGTTTCCGGGG 59.175 55.000 0.00 0.00 34.49 5.73
1442 4395 4.627611 AATACAGTGATGATGTTGCTGC 57.372 40.909 0.00 0.00 32.02 5.25
1467 4420 2.939103 GGTCACCTCGAGATTTCAATGG 59.061 50.000 15.71 0.00 0.00 3.16
1480 4455 1.985473 TCAATGGTTTCAGCAGCAGT 58.015 45.000 0.00 0.00 0.00 4.40
1482 4457 2.034939 TCAATGGTTTCAGCAGCAGTTG 59.965 45.455 0.00 0.00 0.00 3.16
1514 4489 4.705507 TCTTACATTCTCGTCAGTAGCCTT 59.294 41.667 0.00 0.00 0.00 4.35
1517 4492 3.182967 CATTCTCGTCAGTAGCCTTGAC 58.817 50.000 3.46 3.46 41.14 3.18
1522 4497 1.402984 CGTCAGTAGCCTTGACACTCC 60.403 57.143 11.79 0.00 43.98 3.85
1539 4514 2.156917 CTCCAGTGATGTTGTGTGCAT 58.843 47.619 0.00 0.00 0.00 3.96
1547 4522 1.330234 TGTTGTGTGCATGATGGCTT 58.670 45.000 0.00 0.00 34.04 4.35
1559 4536 4.682787 CATGATGGCTTCTACGAACACTA 58.317 43.478 1.86 0.00 0.00 2.74
1560 4537 4.106029 TGATGGCTTCTACGAACACTAC 57.894 45.455 1.86 0.00 0.00 2.73
1577 4554 6.677781 ACACTACCAATTTCGTCATAATGG 57.322 37.500 0.00 0.00 0.00 3.16
1616 4699 6.494893 AGCTTTAATTTGCACGATCTACAA 57.505 33.333 0.00 0.00 0.00 2.41
1636 4737 9.158233 TCTACAAAATTTACACGATTTCTAGGG 57.842 33.333 0.00 0.00 0.00 3.53
1641 4742 8.575649 AAATTTACACGATTTCTAGGGTGAAT 57.424 30.769 0.00 0.00 32.42 2.57
1656 4757 3.695830 GTGAATGGTCTTCACCCTACA 57.304 47.619 6.81 0.00 42.99 2.74
1669 4770 3.649023 TCACCCTACACTAGAAAAGGCAA 59.351 43.478 0.00 0.00 0.00 4.52
1681 4782 6.980397 ACTAGAAAAGGCAAACTGAAAATGTG 59.020 34.615 0.00 0.00 0.00 3.21
1719 4820 3.059603 GCGATTTACTCCTCCGCAA 57.940 52.632 0.00 0.00 44.55 4.85
1736 4837 2.664916 GCAAAAAGAAGCGCAAGATGA 58.335 42.857 11.47 0.00 43.02 2.92
1748 4850 5.987098 AGCGCAAGATGATCTCCAATATAT 58.013 37.500 11.47 0.00 43.02 0.86
1750 4852 6.983307 AGCGCAAGATGATCTCCAATATATAC 59.017 38.462 11.47 0.00 43.02 1.47
1751 4853 6.758416 GCGCAAGATGATCTCCAATATATACA 59.242 38.462 0.30 0.00 43.02 2.29
1752 4854 7.440556 GCGCAAGATGATCTCCAATATATACAT 59.559 37.037 0.30 0.00 43.02 2.29
1754 4856 9.610705 GCAAGATGATCTCCAATATATACATGT 57.389 33.333 2.69 2.69 0.00 3.21
1758 4868 9.404348 GATGATCTCCAATATATACATGTAGCG 57.596 37.037 11.91 0.00 0.00 4.26
1775 4885 1.953559 GCGGATGCTGGAAATACAGA 58.046 50.000 0.00 0.00 40.97 3.41
1808 4918 8.926092 AAACCCAAATAATCTAGCTAGGAATC 57.074 34.615 20.58 0.00 0.00 2.52
1809 4919 7.633018 ACCCAAATAATCTAGCTAGGAATCA 57.367 36.000 20.58 0.96 0.00 2.57
1810 4920 7.684529 ACCCAAATAATCTAGCTAGGAATCAG 58.315 38.462 20.58 6.02 0.00 2.90
1811 4921 7.108847 CCCAAATAATCTAGCTAGGAATCAGG 58.891 42.308 20.58 13.60 0.00 3.86
1812 4922 6.597280 CCAAATAATCTAGCTAGGAATCAGGC 59.403 42.308 20.58 0.00 0.00 4.85
1813 4923 5.948742 ATAATCTAGCTAGGAATCAGGCC 57.051 43.478 20.58 0.00 0.00 5.19
1814 4924 2.775490 TCTAGCTAGGAATCAGGCCA 57.225 50.000 20.58 0.00 0.00 5.36
1815 4925 2.320781 TCTAGCTAGGAATCAGGCCAC 58.679 52.381 20.58 0.00 0.00 5.01
1816 4926 1.346068 CTAGCTAGGAATCAGGCCACC 59.654 57.143 13.32 0.00 0.00 4.61
1817 4927 0.327000 AGCTAGGAATCAGGCCACCT 60.327 55.000 5.01 8.07 36.65 4.00
1818 4928 0.107643 GCTAGGAATCAGGCCACCTC 59.892 60.000 5.01 0.00 34.42 3.85
1819 4929 0.761802 CTAGGAATCAGGCCACCTCC 59.238 60.000 5.01 5.19 34.42 4.30
1820 4930 0.044092 TAGGAATCAGGCCACCTCCA 59.956 55.000 5.01 0.00 34.42 3.86
1821 4931 0.625683 AGGAATCAGGCCACCTCCAT 60.626 55.000 5.01 0.00 0.00 3.41
1822 4932 1.140312 GGAATCAGGCCACCTCCATA 58.860 55.000 5.01 0.00 0.00 2.74
1823 4933 1.707427 GGAATCAGGCCACCTCCATAT 59.293 52.381 5.01 0.00 0.00 1.78
1824 4934 2.290577 GGAATCAGGCCACCTCCATATC 60.291 54.545 5.01 0.00 0.00 1.63
1825 4935 0.979665 ATCAGGCCACCTCCATATCG 59.020 55.000 5.01 0.00 0.00 2.92
1826 4936 1.121407 TCAGGCCACCTCCATATCGG 61.121 60.000 5.01 0.00 0.00 4.18
1827 4937 1.121407 CAGGCCACCTCCATATCGGA 61.121 60.000 5.01 0.00 43.61 4.55
1828 4938 0.178891 AGGCCACCTCCATATCGGAT 60.179 55.000 5.01 0.00 45.19 4.18
1829 4939 0.693049 GGCCACCTCCATATCGGATT 59.307 55.000 0.00 0.00 45.19 3.01
1830 4940 1.906574 GGCCACCTCCATATCGGATTA 59.093 52.381 0.00 0.00 45.19 1.75
1831 4941 2.093447 GGCCACCTCCATATCGGATTAG 60.093 54.545 0.00 0.00 45.19 1.73
1832 4942 2.832129 GCCACCTCCATATCGGATTAGA 59.168 50.000 0.00 0.00 45.19 2.10
1833 4943 3.260884 GCCACCTCCATATCGGATTAGAA 59.739 47.826 0.00 0.00 45.19 2.10
1834 4944 4.262894 GCCACCTCCATATCGGATTAGAAA 60.263 45.833 0.00 0.00 45.19 2.52
1835 4945 5.482908 CCACCTCCATATCGGATTAGAAAG 58.517 45.833 0.00 0.00 45.19 2.62
1836 4946 4.932200 CACCTCCATATCGGATTAGAAAGC 59.068 45.833 0.00 0.00 45.19 3.51
1837 4947 4.020128 ACCTCCATATCGGATTAGAAAGCC 60.020 45.833 0.00 0.00 45.19 4.35
1838 4948 4.223923 CCTCCATATCGGATTAGAAAGCCT 59.776 45.833 0.00 0.00 45.19 4.58
1839 4949 5.407407 TCCATATCGGATTAGAAAGCCTC 57.593 43.478 0.00 0.00 39.64 4.70
1840 4950 4.223032 TCCATATCGGATTAGAAAGCCTCC 59.777 45.833 0.00 0.00 39.64 4.30
1841 4951 4.223923 CCATATCGGATTAGAAAGCCTCCT 59.776 45.833 0.00 0.00 36.56 3.69
1842 4952 5.422331 CCATATCGGATTAGAAAGCCTCCTA 59.578 44.000 0.00 0.00 36.56 2.94
1843 4953 6.070767 CCATATCGGATTAGAAAGCCTCCTAA 60.071 42.308 0.00 0.00 36.56 2.69
1844 4954 7.365117 CCATATCGGATTAGAAAGCCTCCTAAT 60.365 40.741 0.00 0.00 38.04 1.73
1845 4955 5.470047 TCGGATTAGAAAGCCTCCTAATC 57.530 43.478 15.60 15.60 45.08 1.75
1846 4956 5.148502 TCGGATTAGAAAGCCTCCTAATCT 58.851 41.667 19.85 2.69 45.11 2.40
1847 4957 5.244178 TCGGATTAGAAAGCCTCCTAATCTC 59.756 44.000 19.85 13.31 45.11 2.75
1848 4958 5.567823 CGGATTAGAAAGCCTCCTAATCTCC 60.568 48.000 19.85 11.29 45.11 3.71
1849 4959 5.546110 GGATTAGAAAGCCTCCTAATCTCCT 59.454 44.000 19.85 0.00 45.11 3.69
1850 4960 6.295632 GGATTAGAAAGCCTCCTAATCTCCTC 60.296 46.154 19.85 7.85 45.11 3.71
1851 4961 4.279288 AGAAAGCCTCCTAATCTCCTCT 57.721 45.455 0.00 0.00 0.00 3.69
1852 4962 3.966665 AGAAAGCCTCCTAATCTCCTCTG 59.033 47.826 0.00 0.00 0.00 3.35
1853 4963 2.397044 AGCCTCCTAATCTCCTCTGG 57.603 55.000 0.00 0.00 0.00 3.86
1854 4964 1.132881 AGCCTCCTAATCTCCTCTGGG 60.133 57.143 0.00 0.00 0.00 4.45
1855 4965 2.022718 CCTCCTAATCTCCTCTGGGG 57.977 60.000 0.00 0.00 0.00 4.96
1856 4966 1.347062 CTCCTAATCTCCTCTGGGGC 58.653 60.000 0.00 0.00 34.39 5.80
1857 4967 0.104934 TCCTAATCTCCTCTGGGGCC 60.105 60.000 0.00 0.00 34.39 5.80
1858 4968 0.400525 CCTAATCTCCTCTGGGGCCA 60.401 60.000 4.39 0.00 34.39 5.36
1859 4969 1.739750 CTAATCTCCTCTGGGGCCAT 58.260 55.000 4.39 0.00 34.39 4.40
1860 4970 2.495383 CCTAATCTCCTCTGGGGCCATA 60.495 54.545 4.39 0.00 34.39 2.74
1861 4971 2.447582 AATCTCCTCTGGGGCCATAT 57.552 50.000 4.39 0.00 34.39 1.78
1862 4972 1.963985 ATCTCCTCTGGGGCCATATC 58.036 55.000 4.39 0.00 34.39 1.63
1863 4973 0.870313 TCTCCTCTGGGGCCATATCT 59.130 55.000 4.39 0.00 34.39 1.98
1864 4974 0.982704 CTCCTCTGGGGCCATATCTG 59.017 60.000 4.39 0.00 34.39 2.90
1865 4975 1.130054 TCCTCTGGGGCCATATCTGC 61.130 60.000 4.39 0.00 34.39 4.26
1866 4976 1.421346 CCTCTGGGGCCATATCTGCA 61.421 60.000 4.39 0.00 0.00 4.41
1867 4977 0.475475 CTCTGGGGCCATATCTGCAA 59.525 55.000 4.39 0.00 0.00 4.08
1868 4978 0.925558 TCTGGGGCCATATCTGCAAA 59.074 50.000 4.39 0.00 0.00 3.68
1869 4979 1.035139 CTGGGGCCATATCTGCAAAC 58.965 55.000 4.39 0.00 0.00 2.93
1870 4980 0.630673 TGGGGCCATATCTGCAAACT 59.369 50.000 4.39 0.00 0.00 2.66
1871 4981 1.035139 GGGGCCATATCTGCAAACTG 58.965 55.000 4.39 0.00 0.00 3.16
1872 4982 1.035139 GGGCCATATCTGCAAACTGG 58.965 55.000 4.39 0.00 0.00 4.00
1873 4983 1.686115 GGGCCATATCTGCAAACTGGT 60.686 52.381 4.39 0.00 0.00 4.00
1874 4984 2.102578 GGCCATATCTGCAAACTGGTT 58.897 47.619 0.00 0.00 0.00 3.67
1875 4985 2.159198 GGCCATATCTGCAAACTGGTTG 60.159 50.000 0.00 0.00 40.50 3.77
1876 4986 2.754552 GCCATATCTGCAAACTGGTTGA 59.245 45.455 10.13 0.00 39.87 3.18
1877 4987 3.181493 GCCATATCTGCAAACTGGTTGAG 60.181 47.826 10.13 4.25 39.87 3.02
1878 4988 4.012374 CCATATCTGCAAACTGGTTGAGT 58.988 43.478 10.13 0.00 39.87 3.41
1879 4989 4.095483 CCATATCTGCAAACTGGTTGAGTC 59.905 45.833 10.13 0.00 39.87 3.36
1880 4990 3.498774 ATCTGCAAACTGGTTGAGTCT 57.501 42.857 10.13 0.00 39.87 3.24
1881 4991 3.281727 TCTGCAAACTGGTTGAGTCTT 57.718 42.857 10.13 0.00 39.87 3.01
1882 4992 4.415881 TCTGCAAACTGGTTGAGTCTTA 57.584 40.909 10.13 0.00 39.87 2.10
1883 4993 4.776349 TCTGCAAACTGGTTGAGTCTTAA 58.224 39.130 10.13 0.00 39.87 1.85
1884 4994 4.816385 TCTGCAAACTGGTTGAGTCTTAAG 59.184 41.667 10.13 0.00 39.87 1.85
1885 4995 3.882888 TGCAAACTGGTTGAGTCTTAAGG 59.117 43.478 10.13 0.00 39.87 2.69
1886 4996 3.304726 GCAAACTGGTTGAGTCTTAAGGC 60.305 47.826 10.13 0.00 39.87 4.35
1887 4997 2.861147 ACTGGTTGAGTCTTAAGGCC 57.139 50.000 2.75 0.00 0.00 5.19
1888 4998 2.054799 ACTGGTTGAGTCTTAAGGCCA 58.945 47.619 5.01 0.00 0.00 5.36
1889 4999 2.644798 ACTGGTTGAGTCTTAAGGCCAT 59.355 45.455 5.01 0.00 0.00 4.40
1890 5000 3.074538 ACTGGTTGAGTCTTAAGGCCATT 59.925 43.478 5.01 0.00 0.00 3.16
1891 5001 4.082125 CTGGTTGAGTCTTAAGGCCATTT 58.918 43.478 5.01 0.00 0.00 2.32
1892 5002 4.079253 TGGTTGAGTCTTAAGGCCATTTC 58.921 43.478 5.01 0.00 0.00 2.17
1893 5003 4.202567 TGGTTGAGTCTTAAGGCCATTTCT 60.203 41.667 5.01 0.00 0.00 2.52
1894 5004 5.013704 TGGTTGAGTCTTAAGGCCATTTCTA 59.986 40.000 5.01 0.00 0.00 2.10
1895 5005 5.944007 GGTTGAGTCTTAAGGCCATTTCTAA 59.056 40.000 5.01 0.00 0.00 2.10
1896 5006 6.127980 GGTTGAGTCTTAAGGCCATTTCTAAC 60.128 42.308 5.01 3.04 0.00 2.34
1897 5007 5.497474 TGAGTCTTAAGGCCATTTCTAACC 58.503 41.667 5.01 0.00 0.00 2.85
1898 5008 4.514401 AGTCTTAAGGCCATTTCTAACCG 58.486 43.478 5.01 0.00 0.00 4.44
1899 5009 4.224370 AGTCTTAAGGCCATTTCTAACCGA 59.776 41.667 5.01 0.00 0.00 4.69
1900 5010 5.104485 AGTCTTAAGGCCATTTCTAACCGAT 60.104 40.000 5.01 0.00 0.00 4.18
1901 5011 5.236695 GTCTTAAGGCCATTTCTAACCGATC 59.763 44.000 5.01 0.00 0.00 3.69
1902 5012 2.640316 AGGCCATTTCTAACCGATCC 57.360 50.000 5.01 0.00 0.00 3.36
1903 5013 1.143073 AGGCCATTTCTAACCGATCCC 59.857 52.381 5.01 0.00 0.00 3.85
1904 5014 1.143073 GGCCATTTCTAACCGATCCCT 59.857 52.381 0.00 0.00 0.00 4.20
1905 5015 2.370849 GGCCATTTCTAACCGATCCCTA 59.629 50.000 0.00 0.00 0.00 3.53
1906 5016 3.181448 GGCCATTTCTAACCGATCCCTAA 60.181 47.826 0.00 0.00 0.00 2.69
1907 5017 4.506802 GGCCATTTCTAACCGATCCCTAAT 60.507 45.833 0.00 0.00 0.00 1.73
1908 5018 4.455877 GCCATTTCTAACCGATCCCTAATG 59.544 45.833 0.00 0.00 0.00 1.90
1909 5019 5.744887 GCCATTTCTAACCGATCCCTAATGA 60.745 44.000 0.00 0.00 0.00 2.57
1910 5020 6.296026 CCATTTCTAACCGATCCCTAATGAA 58.704 40.000 0.00 0.00 0.00 2.57
1911 5021 6.942576 CCATTTCTAACCGATCCCTAATGAAT 59.057 38.462 0.00 0.00 0.00 2.57
1912 5022 8.100791 CCATTTCTAACCGATCCCTAATGAATA 58.899 37.037 0.00 0.00 0.00 1.75
1913 5023 9.155975 CATTTCTAACCGATCCCTAATGAATAG 57.844 37.037 0.00 0.00 0.00 1.73
1914 5024 8.486942 TTTCTAACCGATCCCTAATGAATAGA 57.513 34.615 0.00 0.00 33.04 1.98
1915 5025 7.704578 TCTAACCGATCCCTAATGAATAGAG 57.295 40.000 0.00 0.00 33.04 2.43
1916 5026 5.746990 AACCGATCCCTAATGAATAGAGG 57.253 43.478 0.00 0.00 33.04 3.69
1917 5027 5.011982 ACCGATCCCTAATGAATAGAGGA 57.988 43.478 0.00 0.00 36.22 3.71
1918 5028 5.020132 ACCGATCCCTAATGAATAGAGGAG 58.980 45.833 0.00 0.00 35.64 3.69
1919 5029 4.404073 CCGATCCCTAATGAATAGAGGAGG 59.596 50.000 0.00 0.00 35.64 4.30
1920 5030 5.265191 CGATCCCTAATGAATAGAGGAGGA 58.735 45.833 0.00 0.00 35.64 3.71
1921 5031 5.896678 CGATCCCTAATGAATAGAGGAGGAT 59.103 44.000 0.00 0.00 35.64 3.24
1922 5032 7.063593 CGATCCCTAATGAATAGAGGAGGATA 58.936 42.308 0.00 0.00 35.64 2.59
1923 5033 7.013846 CGATCCCTAATGAATAGAGGAGGATAC 59.986 44.444 0.00 0.00 35.64 2.24
1924 5034 6.188407 TCCCTAATGAATAGAGGAGGATACG 58.812 44.000 0.00 0.00 35.96 3.06
1925 5035 5.361285 CCCTAATGAATAGAGGAGGATACGG 59.639 48.000 0.00 0.00 35.96 4.02
1926 5036 5.952947 CCTAATGAATAGAGGAGGATACGGT 59.047 44.000 0.00 0.00 35.96 4.83
1927 5037 7.117397 CCTAATGAATAGAGGAGGATACGGTA 58.883 42.308 0.00 0.00 35.96 4.02
1928 5038 7.283580 CCTAATGAATAGAGGAGGATACGGTAG 59.716 44.444 0.00 0.00 35.96 3.18
1929 5039 5.837770 TGAATAGAGGAGGATACGGTAGA 57.162 43.478 0.00 0.00 46.39 2.59
1930 5040 5.806818 TGAATAGAGGAGGATACGGTAGAG 58.193 45.833 0.00 0.00 46.39 2.43
1931 5041 5.310068 TGAATAGAGGAGGATACGGTAGAGT 59.690 44.000 0.00 0.00 46.39 3.24
1932 5042 6.499699 TGAATAGAGGAGGATACGGTAGAGTA 59.500 42.308 0.00 0.00 46.39 2.59
1933 5043 6.949117 ATAGAGGAGGATACGGTAGAGTAA 57.051 41.667 0.00 0.00 46.39 2.24
1934 5044 5.643421 AGAGGAGGATACGGTAGAGTAAA 57.357 43.478 0.00 0.00 46.39 2.01
1935 5045 5.375773 AGAGGAGGATACGGTAGAGTAAAC 58.624 45.833 0.00 0.00 46.39 2.01
1936 5046 5.132480 AGAGGAGGATACGGTAGAGTAAACT 59.868 44.000 0.00 0.00 46.39 2.66
1937 5047 5.375773 AGGAGGATACGGTAGAGTAAACTC 58.624 45.833 1.72 1.72 46.39 3.01
1971 5081 9.780186 AGTATATTTACTCCACTAAGATTTGGC 57.220 33.333 0.00 0.00 33.18 4.52
1972 5082 9.000486 GTATATTTACTCCACTAAGATTTGGCC 58.000 37.037 0.00 0.00 32.37 5.36
1973 5083 2.403252 ACTCCACTAAGATTTGGCCG 57.597 50.000 0.00 0.00 32.37 6.13
1974 5084 1.065418 ACTCCACTAAGATTTGGCCGG 60.065 52.381 0.00 0.00 32.37 6.13
1975 5085 1.209504 CTCCACTAAGATTTGGCCGGA 59.790 52.381 5.05 0.00 32.37 5.14
1976 5086 1.065709 TCCACTAAGATTTGGCCGGAC 60.066 52.381 5.05 0.56 32.37 4.79
1977 5087 1.379527 CACTAAGATTTGGCCGGACC 58.620 55.000 3.83 6.37 39.84 4.46
1978 5088 1.065418 CACTAAGATTTGGCCGGACCT 60.065 52.381 3.83 0.00 40.22 3.85
1979 5089 2.169769 CACTAAGATTTGGCCGGACCTA 59.830 50.000 3.83 0.00 40.22 3.08
1980 5090 2.434702 ACTAAGATTTGGCCGGACCTAG 59.565 50.000 3.83 5.08 40.22 3.02
1981 5091 0.107165 AAGATTTGGCCGGACCTAGC 60.107 55.000 3.83 0.00 40.22 3.42
1982 5092 0.983378 AGATTTGGCCGGACCTAGCT 60.983 55.000 3.83 0.00 40.22 3.32
1983 5093 0.533085 GATTTGGCCGGACCTAGCTC 60.533 60.000 3.83 0.58 40.22 4.09
1984 5094 1.271840 ATTTGGCCGGACCTAGCTCA 61.272 55.000 3.83 0.00 40.22 4.26
1985 5095 1.271840 TTTGGCCGGACCTAGCTCAT 61.272 55.000 3.83 0.00 40.22 2.90
1986 5096 1.686325 TTGGCCGGACCTAGCTCATC 61.686 60.000 3.83 0.00 40.22 2.92
1987 5097 2.737830 GCCGGACCTAGCTCATCC 59.262 66.667 5.05 0.00 0.00 3.51
1988 5098 2.873525 GCCGGACCTAGCTCATCCC 61.874 68.421 5.05 0.00 0.00 3.85
1989 5099 2.210711 CCGGACCTAGCTCATCCCC 61.211 68.421 0.00 0.00 0.00 4.81
1990 5100 1.152440 CGGACCTAGCTCATCCCCT 60.152 63.158 0.00 0.00 0.00 4.79
1991 5101 0.112606 CGGACCTAGCTCATCCCCTA 59.887 60.000 0.00 0.00 0.00 3.53
1992 5102 1.272760 CGGACCTAGCTCATCCCCTAT 60.273 57.143 0.00 0.00 0.00 2.57
1993 5103 2.025226 CGGACCTAGCTCATCCCCTATA 60.025 54.545 0.00 0.00 0.00 1.31
1994 5104 3.373220 CGGACCTAGCTCATCCCCTATAT 60.373 52.174 0.00 0.00 0.00 0.86
1995 5105 4.625963 GGACCTAGCTCATCCCCTATATT 58.374 47.826 0.00 0.00 0.00 1.28
1996 5106 5.033522 GGACCTAGCTCATCCCCTATATTT 58.966 45.833 0.00 0.00 0.00 1.40
1997 5107 6.203072 GGACCTAGCTCATCCCCTATATTTA 58.797 44.000 0.00 0.00 0.00 1.40
1998 5108 6.672657 GGACCTAGCTCATCCCCTATATTTAA 59.327 42.308 0.00 0.00 0.00 1.52
1999 5109 7.364851 GGACCTAGCTCATCCCCTATATTTAAC 60.365 44.444 0.00 0.00 0.00 2.01
2000 5110 6.154706 ACCTAGCTCATCCCCTATATTTAACG 59.845 42.308 0.00 0.00 0.00 3.18
2001 5111 5.422214 AGCTCATCCCCTATATTTAACGG 57.578 43.478 0.00 0.00 0.00 4.44
2002 5112 5.091552 AGCTCATCCCCTATATTTAACGGA 58.908 41.667 0.00 0.00 0.00 4.69
2003 5113 5.187967 AGCTCATCCCCTATATTTAACGGAG 59.812 44.000 0.00 0.00 0.00 4.63
2005 5115 6.154021 GCTCATCCCCTATATTTAACGGAGTA 59.846 42.308 0.00 0.00 45.00 2.59
2006 5116 7.310237 GCTCATCCCCTATATTTAACGGAGTAA 60.310 40.741 0.00 0.00 45.00 2.24
2007 5117 8.495160 TCATCCCCTATATTTAACGGAGTAAA 57.505 34.615 0.00 0.00 45.00 2.01
2008 5118 9.108111 TCATCCCCTATATTTAACGGAGTAAAT 57.892 33.333 6.35 6.35 45.00 1.40
2009 5119 9.162764 CATCCCCTATATTTAACGGAGTAAATG 57.837 37.037 9.84 0.00 45.00 2.32
2010 5120 8.266363 TCCCCTATATTTAACGGAGTAAATGT 57.734 34.615 9.84 6.96 45.00 2.71
2011 5121 8.716779 TCCCCTATATTTAACGGAGTAAATGTT 58.283 33.333 9.84 0.00 45.00 2.71
2012 5122 9.346005 CCCCTATATTTAACGGAGTAAATGTTT 57.654 33.333 9.84 0.00 45.00 2.83
2014 5124 9.659830 CCTATATTTAACGGAGTAAATGTTTGC 57.340 33.333 9.84 0.00 45.00 3.68
2018 5128 8.880878 ATTTAACGGAGTAAATGTTTGCTTTT 57.119 26.923 0.00 0.00 45.00 2.27
2019 5129 8.705048 TTTAACGGAGTAAATGTTTGCTTTTT 57.295 26.923 0.00 0.00 45.00 1.94
2043 5153 9.569122 TTTTCTAAACTTTGCATTCTACTACCT 57.431 29.630 0.00 0.00 0.00 3.08
2044 5154 8.773404 TTCTAAACTTTGCATTCTACTACCTC 57.227 34.615 0.00 0.00 0.00 3.85
2045 5155 8.135382 TCTAAACTTTGCATTCTACTACCTCT 57.865 34.615 0.00 0.00 0.00 3.69
2046 5156 8.251721 TCTAAACTTTGCATTCTACTACCTCTC 58.748 37.037 0.00 0.00 0.00 3.20
2047 5157 6.613153 AACTTTGCATTCTACTACCTCTCT 57.387 37.500 0.00 0.00 0.00 3.10
2048 5158 6.215495 ACTTTGCATTCTACTACCTCTCTC 57.785 41.667 0.00 0.00 0.00 3.20
2049 5159 5.128008 ACTTTGCATTCTACTACCTCTCTCC 59.872 44.000 0.00 0.00 0.00 3.71
2050 5160 3.567397 TGCATTCTACTACCTCTCTCCC 58.433 50.000 0.00 0.00 0.00 4.30
2051 5161 3.052869 TGCATTCTACTACCTCTCTCCCA 60.053 47.826 0.00 0.00 0.00 4.37
2052 5162 3.572255 GCATTCTACTACCTCTCTCCCAG 59.428 52.174 0.00 0.00 0.00 4.45
2053 5163 4.798882 CATTCTACTACCTCTCTCCCAGT 58.201 47.826 0.00 0.00 0.00 4.00
2054 5164 4.949966 TTCTACTACCTCTCTCCCAGTT 57.050 45.455 0.00 0.00 0.00 3.16
2055 5165 4.949966 TCTACTACCTCTCTCCCAGTTT 57.050 45.455 0.00 0.00 0.00 2.66
2056 5166 6.398655 TTCTACTACCTCTCTCCCAGTTTA 57.601 41.667 0.00 0.00 0.00 2.01
2057 5167 5.753716 TCTACTACCTCTCTCCCAGTTTAC 58.246 45.833 0.00 0.00 0.00 2.01
2058 5168 4.399483 ACTACCTCTCTCCCAGTTTACA 57.601 45.455 0.00 0.00 0.00 2.41
2059 5169 4.748701 ACTACCTCTCTCCCAGTTTACAA 58.251 43.478 0.00 0.00 0.00 2.41
2060 5170 4.773149 ACTACCTCTCTCCCAGTTTACAAG 59.227 45.833 0.00 0.00 0.00 3.16
2061 5171 2.907042 ACCTCTCTCCCAGTTTACAAGG 59.093 50.000 0.00 0.00 0.00 3.61
2062 5172 2.355209 CCTCTCTCCCAGTTTACAAGGC 60.355 54.545 0.00 0.00 0.00 4.35
2063 5173 1.275291 TCTCTCCCAGTTTACAAGGCG 59.725 52.381 0.00 0.00 0.00 5.52
2064 5174 1.002087 CTCTCCCAGTTTACAAGGCGT 59.998 52.381 0.00 0.00 0.00 5.68
2065 5175 1.156736 CTCCCAGTTTACAAGGCGTG 58.843 55.000 0.00 0.00 0.00 5.34
2066 5176 0.887387 TCCCAGTTTACAAGGCGTGC 60.887 55.000 0.00 0.00 0.00 5.34
2067 5177 1.206578 CCAGTTTACAAGGCGTGCG 59.793 57.895 0.00 0.00 0.00 5.34
2068 5178 1.440353 CAGTTTACAAGGCGTGCGC 60.440 57.895 8.17 8.17 41.06 6.09
2069 5179 2.498887 GTTTACAAGGCGTGCGCG 60.499 61.111 16.86 16.86 43.06 6.86
2070 5180 2.968156 TTTACAAGGCGTGCGCGT 60.968 55.556 22.18 8.25 43.06 6.01
2071 5181 3.230005 TTTACAAGGCGTGCGCGTG 62.230 57.895 22.18 14.14 43.06 5.34
2084 5194 4.509737 GCGTGCCCCTAGGTCGTC 62.510 72.222 8.29 0.00 35.88 4.20
2085 5195 3.066190 CGTGCCCCTAGGTCGTCA 61.066 66.667 8.29 0.00 34.57 4.35
2086 5196 2.642254 CGTGCCCCTAGGTCGTCAA 61.642 63.158 8.29 0.00 34.57 3.18
2087 5197 1.905512 GTGCCCCTAGGTCGTCAAT 59.094 57.895 8.29 0.00 34.57 2.57
2088 5198 0.252197 GTGCCCCTAGGTCGTCAATT 59.748 55.000 8.29 0.00 34.57 2.32
2089 5199 0.988832 TGCCCCTAGGTCGTCAATTT 59.011 50.000 8.29 0.00 34.57 1.82
2090 5200 1.339631 TGCCCCTAGGTCGTCAATTTG 60.340 52.381 8.29 0.00 34.57 2.32
2091 5201 1.065709 GCCCCTAGGTCGTCAATTTGA 60.066 52.381 8.29 0.00 34.57 2.69
2092 5202 2.629051 CCCCTAGGTCGTCAATTTGAC 58.371 52.381 17.76 17.76 43.65 3.18
2093 5203 2.236395 CCCCTAGGTCGTCAATTTGACT 59.764 50.000 23.29 10.24 44.85 3.41
2094 5204 3.449737 CCCCTAGGTCGTCAATTTGACTA 59.550 47.826 23.29 12.80 44.85 2.59
2095 5205 4.081309 CCCCTAGGTCGTCAATTTGACTAA 60.081 45.833 23.29 11.42 44.85 2.24
2096 5206 4.868734 CCCTAGGTCGTCAATTTGACTAAC 59.131 45.833 23.29 19.89 44.85 2.34
2097 5207 4.868734 CCTAGGTCGTCAATTTGACTAACC 59.131 45.833 27.23 27.23 44.85 2.85
2098 5208 4.618920 AGGTCGTCAATTTGACTAACCT 57.381 40.909 29.44 29.44 46.82 3.50
2101 5211 6.980051 GGTCGTCAATTTGACTAACCTAAT 57.020 37.500 27.23 0.00 44.85 1.73
2103 5213 7.903062 GGTCGTCAATTTGACTAACCTAATAC 58.097 38.462 27.23 13.72 44.85 1.89
2104 5214 7.546667 GGTCGTCAATTTGACTAACCTAATACA 59.453 37.037 27.23 2.94 44.85 2.29
2105 5215 8.928733 GTCGTCAATTTGACTAACCTAATACAA 58.071 33.333 23.29 0.00 44.85 2.41
2106 5216 9.146984 TCGTCAATTTGACTAACCTAATACAAG 57.853 33.333 23.29 6.50 44.85 3.16
2107 5217 8.932791 CGTCAATTTGACTAACCTAATACAAGT 58.067 33.333 23.29 0.00 44.85 3.16
2163 5273 9.574516 ACTTTAGATGTTCTATTTCCAAACTGT 57.425 29.630 0.00 0.00 0.00 3.55
2212 5322 5.146010 TGAAGGTGATAAAATTGGCAACC 57.854 39.130 0.00 0.00 0.00 3.77
2213 5323 4.837860 TGAAGGTGATAAAATTGGCAACCT 59.162 37.500 0.00 0.00 0.00 3.50
2214 5324 6.013379 TGAAGGTGATAAAATTGGCAACCTA 58.987 36.000 0.00 0.00 0.00 3.08
2215 5325 6.152661 TGAAGGTGATAAAATTGGCAACCTAG 59.847 38.462 0.00 0.00 0.00 3.02
2216 5326 4.956075 AGGTGATAAAATTGGCAACCTAGG 59.044 41.667 7.41 7.41 0.00 3.02
2217 5327 4.709886 GGTGATAAAATTGGCAACCTAGGT 59.290 41.667 9.21 9.21 0.00 3.08
2218 5328 5.889289 GGTGATAAAATTGGCAACCTAGGTA 59.111 40.000 16.67 0.00 0.00 3.08
2219 5329 6.549736 GGTGATAAAATTGGCAACCTAGGTAT 59.450 38.462 16.67 0.83 0.00 2.73
2220 5330 7.722285 GGTGATAAAATTGGCAACCTAGGTATA 59.278 37.037 16.67 0.00 0.00 1.47
2221 5331 8.565416 GTGATAAAATTGGCAACCTAGGTATAC 58.435 37.037 16.67 8.74 0.00 1.47
2222 5332 7.442969 TGATAAAATTGGCAACCTAGGTATACG 59.557 37.037 16.67 5.52 0.00 3.06
2223 5333 2.607631 TTGGCAACCTAGGTATACGC 57.392 50.000 16.67 15.11 0.00 4.42
2224 5334 1.487300 TGGCAACCTAGGTATACGCA 58.513 50.000 16.67 5.50 0.00 5.24
2225 5335 2.043992 TGGCAACCTAGGTATACGCAT 58.956 47.619 16.67 0.00 0.00 4.73
2226 5336 3.232662 TGGCAACCTAGGTATACGCATA 58.767 45.455 16.67 6.29 0.00 3.14
2227 5337 3.257375 TGGCAACCTAGGTATACGCATAG 59.743 47.826 16.67 0.00 0.00 2.23
2228 5338 3.368116 GGCAACCTAGGTATACGCATAGG 60.368 52.174 16.67 18.75 40.58 2.57
2229 5339 3.508793 GCAACCTAGGTATACGCATAGGA 59.491 47.826 23.78 0.00 38.53 2.94
2230 5340 4.617762 GCAACCTAGGTATACGCATAGGAC 60.618 50.000 23.78 13.98 38.53 3.85
2231 5341 4.654389 ACCTAGGTATACGCATAGGACT 57.346 45.455 23.78 6.78 38.53 3.85
2232 5342 4.995536 ACCTAGGTATACGCATAGGACTT 58.004 43.478 23.78 8.07 38.53 3.01
2233 5343 5.392125 ACCTAGGTATACGCATAGGACTTT 58.608 41.667 23.78 7.82 38.53 2.66
2234 5344 5.837438 ACCTAGGTATACGCATAGGACTTTT 59.163 40.000 23.78 7.56 38.53 2.27
2235 5345 7.006509 ACCTAGGTATACGCATAGGACTTTTA 58.993 38.462 23.78 0.00 38.53 1.52
2236 5346 7.506938 ACCTAGGTATACGCATAGGACTTTTAA 59.493 37.037 23.78 0.00 38.53 1.52
2237 5347 8.362639 CCTAGGTATACGCATAGGACTTTTAAA 58.637 37.037 16.76 0.00 37.57 1.52
2238 5348 9.189723 CTAGGTATACGCATAGGACTTTTAAAC 57.810 37.037 0.00 0.00 0.00 2.01
2239 5349 7.789026 AGGTATACGCATAGGACTTTTAAACT 58.211 34.615 0.00 0.00 0.00 2.66
2240 5350 7.709613 AGGTATACGCATAGGACTTTTAAACTG 59.290 37.037 0.00 0.00 0.00 3.16
2241 5351 7.707893 GGTATACGCATAGGACTTTTAAACTGA 59.292 37.037 0.00 0.00 0.00 3.41
2242 5352 9.090692 GTATACGCATAGGACTTTTAAACTGAA 57.909 33.333 0.00 0.00 0.00 3.02
2243 5353 6.870971 ACGCATAGGACTTTTAAACTGAAA 57.129 33.333 0.00 0.00 0.00 2.69
2244 5354 6.665465 ACGCATAGGACTTTTAAACTGAAAC 58.335 36.000 0.00 0.00 0.00 2.78
2245 5355 5.788531 CGCATAGGACTTTTAAACTGAAACG 59.211 40.000 0.00 0.00 0.00 3.60
2246 5356 6.084277 GCATAGGACTTTTAAACTGAAACGG 58.916 40.000 0.00 0.00 0.00 4.44
2247 5357 6.072893 GCATAGGACTTTTAAACTGAAACGGA 60.073 38.462 0.00 0.00 0.00 4.69
2248 5358 7.519002 CATAGGACTTTTAAACTGAAACGGAG 58.481 38.462 0.00 0.00 0.00 4.63
2249 5359 4.820173 AGGACTTTTAAACTGAAACGGAGG 59.180 41.667 0.00 0.00 0.00 4.30
2250 5360 4.577693 GGACTTTTAAACTGAAACGGAGGT 59.422 41.667 0.00 0.00 0.00 3.85
2251 5361 5.759763 GGACTTTTAAACTGAAACGGAGGTA 59.240 40.000 0.00 0.00 0.00 3.08
2252 5362 6.073385 GGACTTTTAAACTGAAACGGAGGTAG 60.073 42.308 0.00 0.00 0.00 3.18
2253 5363 6.351711 ACTTTTAAACTGAAACGGAGGTAGT 58.648 36.000 0.00 0.00 0.00 2.73
2254 5364 7.500141 ACTTTTAAACTGAAACGGAGGTAGTA 58.500 34.615 0.00 0.00 0.00 1.82
2255 5365 7.654923 ACTTTTAAACTGAAACGGAGGTAGTAG 59.345 37.037 0.00 0.00 0.00 2.57
2256 5366 6.655078 TTAAACTGAAACGGAGGTAGTAGT 57.345 37.500 0.00 0.00 0.00 2.73
2257 5367 7.759489 TTAAACTGAAACGGAGGTAGTAGTA 57.241 36.000 0.00 0.00 0.00 1.82
2258 5368 6.847421 AAACTGAAACGGAGGTAGTAGTAT 57.153 37.500 0.00 0.00 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.605319 CGTAGTTGCCCTTGGAAGCA 60.605 55.000 0.00 0.00 37.18 3.91
170 185 0.668706 CACTTCCTCCGCACAGAGTG 60.669 60.000 0.00 0.00 36.51 3.51
187 202 1.132588 GCTCTCTTCGTGTGACACAC 58.867 55.000 25.76 25.76 45.26 3.82
312 2775 9.291664 GTAAAGTTCTCGCATATATATCTGTCC 57.708 37.037 0.00 0.00 0.00 4.02
352 2815 6.751514 TGACACCCAATAATGTAACACATC 57.248 37.500 0.00 0.00 37.97 3.06
420 2885 5.070001 CACCCATCCAAGTAACAAGAAAGA 58.930 41.667 0.00 0.00 0.00 2.52
532 3151 9.878667 TCAAATTAGGACATCAACTTATCGTTA 57.121 29.630 0.00 0.00 33.63 3.18
535 3154 7.852945 GCTTCAAATTAGGACATCAACTTATCG 59.147 37.037 0.00 0.00 0.00 2.92
540 3159 7.373493 CAAAGCTTCAAATTAGGACATCAACT 58.627 34.615 0.00 0.00 0.00 3.16
573 3197 3.687698 GCCTTCCTGTTTCTTATACGCAA 59.312 43.478 0.00 0.00 0.00 4.85
574 3198 3.267483 GCCTTCCTGTTTCTTATACGCA 58.733 45.455 0.00 0.00 0.00 5.24
576 3200 6.537301 TGTTATGCCTTCCTGTTTCTTATACG 59.463 38.462 0.00 0.00 0.00 3.06
578 3202 8.736244 GTTTGTTATGCCTTCCTGTTTCTTATA 58.264 33.333 0.00 0.00 0.00 0.98
582 3206 4.280929 GGTTTGTTATGCCTTCCTGTTTCT 59.719 41.667 0.00 0.00 0.00 2.52
590 3215 4.953579 TCTAATGGGGTTTGTTATGCCTTC 59.046 41.667 0.00 0.00 0.00 3.46
591 3216 4.941713 TCTAATGGGGTTTGTTATGCCTT 58.058 39.130 0.00 0.00 0.00 4.35
601 3226 7.006509 CCTCATGACATAATCTAATGGGGTTT 58.993 38.462 0.00 0.00 0.00 3.27
662 3306 6.486657 TCAAGGAAGACCAATACAAAGAACAG 59.513 38.462 0.00 0.00 38.94 3.16
786 3434 7.254863 GGACAAGATGCAATTTCATGTGTTTTT 60.255 33.333 1.66 0.00 0.00 1.94
787 3435 6.203338 GGACAAGATGCAATTTCATGTGTTTT 59.797 34.615 1.66 0.00 0.00 2.43
788 3436 5.697633 GGACAAGATGCAATTTCATGTGTTT 59.302 36.000 1.66 0.00 0.00 2.83
789 3437 5.011329 AGGACAAGATGCAATTTCATGTGTT 59.989 36.000 1.66 0.00 0.00 3.32
790 3438 4.525487 AGGACAAGATGCAATTTCATGTGT 59.475 37.500 1.66 0.00 0.00 3.72
791 3439 5.068234 AGGACAAGATGCAATTTCATGTG 57.932 39.130 1.66 0.00 0.00 3.21
792 3440 5.014858 AGAGGACAAGATGCAATTTCATGT 58.985 37.500 0.00 0.00 0.00 3.21
793 3441 5.357314 AGAGAGGACAAGATGCAATTTCATG 59.643 40.000 0.00 0.00 0.00 3.07
794 3442 5.507637 AGAGAGGACAAGATGCAATTTCAT 58.492 37.500 0.00 0.00 0.00 2.57
840 3492 6.790282 TGTTGACGAAATGAATTTTGTGAGA 58.210 32.000 12.37 0.00 42.76 3.27
858 3511 0.385974 GGTTGCATGCGTCTGTTGAC 60.386 55.000 14.09 1.48 39.70 3.18
859 3512 1.514678 GGGTTGCATGCGTCTGTTGA 61.515 55.000 14.09 0.00 0.00 3.18
862 3515 1.303561 ATGGGTTGCATGCGTCTGT 60.304 52.632 14.09 0.00 0.00 3.41
867 3520 4.557605 GGCGATGGGTTGCATGCG 62.558 66.667 14.09 0.00 36.39 4.73
890 3548 3.621558 AGAGGACACACTCGTGATGATA 58.378 45.455 3.74 0.00 46.80 2.15
899 3557 1.609555 AGTCAACGAGAGGACACACTC 59.390 52.381 0.00 0.00 36.50 3.51
900 3558 1.693627 AGTCAACGAGAGGACACACT 58.306 50.000 0.00 0.00 36.50 3.55
901 3559 3.637998 TTAGTCAACGAGAGGACACAC 57.362 47.619 0.00 0.00 36.50 3.82
902 3560 3.192844 GGATTAGTCAACGAGAGGACACA 59.807 47.826 0.00 0.00 36.50 3.72
903 3561 3.192844 TGGATTAGTCAACGAGAGGACAC 59.807 47.826 0.00 0.00 36.50 3.67
904 3562 3.427573 TGGATTAGTCAACGAGAGGACA 58.572 45.455 0.00 0.00 36.50 4.02
905 3563 3.444388 ACTGGATTAGTCAACGAGAGGAC 59.556 47.826 0.00 0.00 33.17 3.85
913 3574 3.424962 GCTTGCGAACTGGATTAGTCAAC 60.425 47.826 0.00 0.00 39.18 3.18
923 3584 3.793144 GCTCGGCTTGCGAACTGG 61.793 66.667 0.00 0.00 0.00 4.00
936 3597 0.861837 GATGATTACGGCCTTGCTCG 59.138 55.000 0.00 0.00 0.00 5.03
937 3598 1.230324 GGATGATTACGGCCTTGCTC 58.770 55.000 0.00 0.00 0.00 4.26
991 3707 2.095461 GAAGGAAAGGATGGAGGCAAC 58.905 52.381 0.00 0.00 0.00 4.17
999 3715 1.032114 GGGCACGGAAGGAAAGGATG 61.032 60.000 0.00 0.00 0.00 3.51
1012 3728 3.462483 TGTGTATTGTATAGGGGCACG 57.538 47.619 0.00 0.00 0.00 5.34
1014 3730 4.041464 TCCTTGTGTATTGTATAGGGGCA 58.959 43.478 0.00 0.00 0.00 5.36
1019 3735 9.212641 CTTCCATGATCCTTGTGTATTGTATAG 57.787 37.037 0.00 0.00 0.00 1.31
1027 3743 2.846206 AGCCTTCCATGATCCTTGTGTA 59.154 45.455 0.00 0.00 0.00 2.90
1035 3762 0.384669 GCAGCAAGCCTTCCATGATC 59.615 55.000 0.00 0.00 37.23 2.92
1036 3763 2.501492 GCAGCAAGCCTTCCATGAT 58.499 52.632 0.00 0.00 37.23 2.45
1075 3802 0.663688 CCGTCGATGTAGTGGAGGAG 59.336 60.000 3.52 0.00 0.00 3.69
1152 3885 1.728490 GGCGGACGTAATAGGACCGT 61.728 60.000 20.48 0.05 44.48 4.83
1157 3890 1.371389 GCGAGGCGGACGTAATAGG 60.371 63.158 0.00 0.00 0.00 2.57
1252 3988 9.868277 ACGAGAGAAGATGATTATCCATTATTC 57.132 33.333 0.00 0.00 33.64 1.75
1373 4248 6.681777 ACTGTAAATCTTTGATCCAGTTTGC 58.318 36.000 0.00 0.00 0.00 3.68
1407 4282 7.543172 TCATCACTGTATTTAACTGGAACGTAC 59.457 37.037 0.00 0.00 0.00 3.67
1415 4368 7.695201 CAGCAACATCATCACTGTATTTAACTG 59.305 37.037 0.00 0.00 0.00 3.16
1442 4395 0.108615 AAATCTCGAGGTGACCGCAG 60.109 55.000 13.56 2.55 0.00 5.18
1467 4420 0.318445 CTGCCAACTGCTGCTGAAAC 60.318 55.000 13.69 0.91 42.00 2.78
1480 4455 6.170506 ACGAGAATGTAAGAAATACTGCCAA 58.829 36.000 0.00 0.00 35.42 4.52
1482 4457 5.810587 TGACGAGAATGTAAGAAATACTGCC 59.189 40.000 0.00 0.00 35.42 4.85
1514 4489 2.170397 ACACAACATCACTGGAGTGTCA 59.830 45.455 6.68 0.00 45.76 3.58
1517 4492 1.265095 GCACACAACATCACTGGAGTG 59.735 52.381 0.00 0.00 46.91 3.51
1522 4497 3.498082 CATCATGCACACAACATCACTG 58.502 45.455 0.00 0.00 0.00 3.66
1539 4514 3.119245 GGTAGTGTTCGTAGAAGCCATCA 60.119 47.826 0.00 0.00 45.90 3.07
1559 4536 4.889409 AGCATCCATTATGACGAAATTGGT 59.111 37.500 0.00 0.00 37.86 3.67
1560 4537 5.443185 AGCATCCATTATGACGAAATTGG 57.557 39.130 0.00 0.00 37.86 3.16
1599 4682 8.911662 GTGTAAATTTTGTAGATCGTGCAAATT 58.088 29.630 0.00 7.61 40.06 1.82
1604 4687 5.849858 TCGTGTAAATTTTGTAGATCGTGC 58.150 37.500 0.00 0.00 0.00 5.34
1616 4699 7.989416 TTCACCCTAGAAATCGTGTAAATTT 57.011 32.000 0.00 0.00 0.00 1.82
1621 4722 4.468510 ACCATTCACCCTAGAAATCGTGTA 59.531 41.667 0.00 0.00 0.00 2.90
1636 4737 3.335579 GTGTAGGGTGAAGACCATTCAC 58.664 50.000 11.38 11.38 43.94 3.18
1641 4742 3.820195 TCTAGTGTAGGGTGAAGACCA 57.180 47.619 0.00 0.00 45.25 4.02
1656 4757 6.980397 CACATTTTCAGTTTGCCTTTTCTAGT 59.020 34.615 0.00 0.00 0.00 2.57
1669 4770 4.081752 TCAACTTGGCACACATTTTCAGTT 60.082 37.500 0.00 0.00 39.29 3.16
1681 4782 0.179018 ACTCCTGGTCAACTTGGCAC 60.179 55.000 0.00 0.00 0.00 5.01
1719 4820 3.376546 GGAGATCATCTTGCGCTTCTTTT 59.623 43.478 9.73 0.00 0.00 2.27
1736 4837 7.898014 TCCGCTACATGTATATATTGGAGAT 57.102 36.000 5.91 0.00 0.00 2.75
1752 4854 9.948818 AAATCTGTATTTCCAGCATCCGCTACA 62.949 40.741 0.00 0.00 37.23 2.74
1754 4856 5.687441 AAATCTGTATTTCCAGCATCCGCTA 60.687 40.000 0.00 0.00 37.23 4.26
1793 4903 3.326297 GTGGCCTGATTCCTAGCTAGATT 59.674 47.826 22.70 6.06 0.00 2.40
1799 4909 0.107643 GAGGTGGCCTGATTCCTAGC 59.892 60.000 3.32 0.00 31.76 3.42
1804 4914 2.613977 CGATATGGAGGTGGCCTGATTC 60.614 54.545 3.32 0.00 31.76 2.52
1805 4915 1.349026 CGATATGGAGGTGGCCTGATT 59.651 52.381 3.32 0.00 31.76 2.57
1806 4916 0.979665 CGATATGGAGGTGGCCTGAT 59.020 55.000 3.32 0.00 31.76 2.90
1807 4917 1.121407 CCGATATGGAGGTGGCCTGA 61.121 60.000 3.32 0.00 42.00 3.86
1808 4918 1.121407 TCCGATATGGAGGTGGCCTG 61.121 60.000 3.32 0.00 43.74 4.85
1809 4919 1.235989 TCCGATATGGAGGTGGCCT 59.764 57.895 3.32 0.00 43.74 5.19
1810 4920 3.885814 TCCGATATGGAGGTGGCC 58.114 61.111 0.00 0.00 43.74 5.36
1818 4928 4.223923 AGGAGGCTTTCTAATCCGATATGG 59.776 45.833 0.00 0.00 36.91 2.74
1819 4929 5.413309 AGGAGGCTTTCTAATCCGATATG 57.587 43.478 0.00 0.00 36.91 1.78
1820 4930 7.621683 AGATTAGGAGGCTTTCTAATCCGATAT 59.378 37.037 25.71 10.35 46.30 1.63
1821 4931 6.954684 AGATTAGGAGGCTTTCTAATCCGATA 59.045 38.462 25.71 0.00 46.30 2.92
1822 4932 5.782845 AGATTAGGAGGCTTTCTAATCCGAT 59.217 40.000 25.71 10.94 46.30 4.18
1823 4933 5.148502 AGATTAGGAGGCTTTCTAATCCGA 58.851 41.667 25.71 6.66 46.30 4.55
1824 4934 5.474825 GAGATTAGGAGGCTTTCTAATCCG 58.525 45.833 25.71 0.00 46.30 4.18
1825 4935 5.546110 AGGAGATTAGGAGGCTTTCTAATCC 59.454 44.000 25.71 17.19 46.30 3.01
1826 4936 6.496911 AGAGGAGATTAGGAGGCTTTCTAATC 59.503 42.308 23.24 23.24 45.87 1.75
1827 4937 6.269769 CAGAGGAGATTAGGAGGCTTTCTAAT 59.730 42.308 9.07 9.07 38.46 1.73
1828 4938 5.600484 CAGAGGAGATTAGGAGGCTTTCTAA 59.400 44.000 0.00 0.00 0.00 2.10
1829 4939 5.144100 CAGAGGAGATTAGGAGGCTTTCTA 58.856 45.833 0.00 0.00 0.00 2.10
1830 4940 3.966665 CAGAGGAGATTAGGAGGCTTTCT 59.033 47.826 0.00 0.00 0.00 2.52
1831 4941 3.070878 CCAGAGGAGATTAGGAGGCTTTC 59.929 52.174 0.00 0.00 0.00 2.62
1832 4942 3.044894 CCAGAGGAGATTAGGAGGCTTT 58.955 50.000 0.00 0.00 0.00 3.51
1833 4943 2.688477 CCAGAGGAGATTAGGAGGCTT 58.312 52.381 0.00 0.00 0.00 4.35
1834 4944 1.132881 CCCAGAGGAGATTAGGAGGCT 60.133 57.143 0.00 0.00 33.47 4.58
1835 4945 1.347062 CCCAGAGGAGATTAGGAGGC 58.653 60.000 0.00 0.00 33.47 4.70
1836 4946 2.022718 CCCCAGAGGAGATTAGGAGG 57.977 60.000 0.00 0.00 38.24 4.30
1837 4947 1.347062 GCCCCAGAGGAGATTAGGAG 58.653 60.000 0.00 0.00 38.24 3.69
1838 4948 0.104934 GGCCCCAGAGGAGATTAGGA 60.105 60.000 0.00 0.00 38.24 2.94
1839 4949 0.400525 TGGCCCCAGAGGAGATTAGG 60.401 60.000 0.00 0.00 38.24 2.69
1840 4950 1.739750 ATGGCCCCAGAGGAGATTAG 58.260 55.000 0.00 0.00 38.24 1.73
1841 4951 3.079689 AGATATGGCCCCAGAGGAGATTA 59.920 47.826 0.00 0.00 38.24 1.75
1842 4952 2.157880 AGATATGGCCCCAGAGGAGATT 60.158 50.000 0.00 0.00 38.24 2.40
1843 4953 1.440345 AGATATGGCCCCAGAGGAGAT 59.560 52.381 0.00 0.00 38.24 2.75
1844 4954 0.870313 AGATATGGCCCCAGAGGAGA 59.130 55.000 0.00 0.00 38.24 3.71
1845 4955 0.982704 CAGATATGGCCCCAGAGGAG 59.017 60.000 0.00 0.00 38.24 3.69
1846 4956 1.130054 GCAGATATGGCCCCAGAGGA 61.130 60.000 0.00 0.00 38.24 3.71
1847 4957 1.377994 GCAGATATGGCCCCAGAGG 59.622 63.158 0.00 0.00 39.47 3.69
1848 4958 0.475475 TTGCAGATATGGCCCCAGAG 59.525 55.000 0.00 0.00 0.00 3.35
1849 4959 0.925558 TTTGCAGATATGGCCCCAGA 59.074 50.000 0.00 0.00 0.00 3.86
1850 4960 1.035139 GTTTGCAGATATGGCCCCAG 58.965 55.000 0.00 0.00 0.00 4.45
1851 4961 0.630673 AGTTTGCAGATATGGCCCCA 59.369 50.000 0.00 0.00 0.00 4.96
1852 4962 1.035139 CAGTTTGCAGATATGGCCCC 58.965 55.000 0.00 0.00 0.00 5.80
1853 4963 1.035139 CCAGTTTGCAGATATGGCCC 58.965 55.000 0.00 0.00 0.00 5.80
1854 4964 1.767759 ACCAGTTTGCAGATATGGCC 58.232 50.000 10.34 0.00 34.24 5.36
1855 4965 2.754552 TCAACCAGTTTGCAGATATGGC 59.245 45.455 10.34 0.00 34.88 4.40
1856 4966 4.012374 ACTCAACCAGTTTGCAGATATGG 58.988 43.478 9.20 9.20 34.88 2.74
1857 4967 4.940046 AGACTCAACCAGTTTGCAGATATG 59.060 41.667 0.00 0.00 34.41 1.78
1858 4968 5.171339 AGACTCAACCAGTTTGCAGATAT 57.829 39.130 0.00 0.00 34.41 1.63
1859 4969 4.623932 AGACTCAACCAGTTTGCAGATA 57.376 40.909 0.00 0.00 34.41 1.98
1860 4970 3.498774 AGACTCAACCAGTTTGCAGAT 57.501 42.857 0.00 0.00 34.41 2.90
1861 4971 3.281727 AAGACTCAACCAGTTTGCAGA 57.718 42.857 0.00 0.00 34.41 4.26
1862 4972 4.023707 CCTTAAGACTCAACCAGTTTGCAG 60.024 45.833 3.36 0.00 34.41 4.41
1863 4973 3.882888 CCTTAAGACTCAACCAGTTTGCA 59.117 43.478 3.36 0.00 34.41 4.08
1864 4974 3.304726 GCCTTAAGACTCAACCAGTTTGC 60.305 47.826 3.36 0.00 34.41 3.68
1865 4975 3.253432 GGCCTTAAGACTCAACCAGTTTG 59.747 47.826 3.36 0.00 34.41 2.93
1866 4976 3.117663 TGGCCTTAAGACTCAACCAGTTT 60.118 43.478 3.32 0.00 34.41 2.66
1867 4977 2.441750 TGGCCTTAAGACTCAACCAGTT 59.558 45.455 3.32 0.00 34.41 3.16
1868 4978 2.054799 TGGCCTTAAGACTCAACCAGT 58.945 47.619 3.32 0.00 38.45 4.00
1869 4979 2.859165 TGGCCTTAAGACTCAACCAG 57.141 50.000 3.32 0.00 0.00 4.00
1870 4980 3.806949 AATGGCCTTAAGACTCAACCA 57.193 42.857 3.32 2.26 0.00 3.67
1871 4981 4.336280 AGAAATGGCCTTAAGACTCAACC 58.664 43.478 3.32 0.00 0.00 3.77
1872 4982 6.127980 GGTTAGAAATGGCCTTAAGACTCAAC 60.128 42.308 3.32 0.00 0.00 3.18
1873 4983 5.944007 GGTTAGAAATGGCCTTAAGACTCAA 59.056 40.000 3.32 0.00 0.00 3.02
1874 4984 5.497474 GGTTAGAAATGGCCTTAAGACTCA 58.503 41.667 3.32 0.00 0.00 3.41
1875 4985 4.571176 CGGTTAGAAATGGCCTTAAGACTC 59.429 45.833 3.32 0.00 0.00 3.36
1876 4986 4.224370 TCGGTTAGAAATGGCCTTAAGACT 59.776 41.667 3.32 0.00 0.00 3.24
1877 4987 4.510571 TCGGTTAGAAATGGCCTTAAGAC 58.489 43.478 3.32 0.00 0.00 3.01
1878 4988 4.829872 TCGGTTAGAAATGGCCTTAAGA 57.170 40.909 3.32 0.00 0.00 2.10
1879 4989 4.515567 GGATCGGTTAGAAATGGCCTTAAG 59.484 45.833 3.32 0.00 0.00 1.85
1880 4990 4.457466 GGATCGGTTAGAAATGGCCTTAA 58.543 43.478 3.32 0.00 0.00 1.85
1881 4991 3.181448 GGGATCGGTTAGAAATGGCCTTA 60.181 47.826 3.32 0.00 0.00 2.69
1882 4992 2.422945 GGGATCGGTTAGAAATGGCCTT 60.423 50.000 3.32 0.00 0.00 4.35
1883 4993 1.143073 GGGATCGGTTAGAAATGGCCT 59.857 52.381 3.32 0.00 0.00 5.19
1884 4994 1.143073 AGGGATCGGTTAGAAATGGCC 59.857 52.381 0.00 0.00 0.00 5.36
1885 4995 2.640316 AGGGATCGGTTAGAAATGGC 57.360 50.000 0.00 0.00 0.00 4.40
1886 4996 5.865085 TCATTAGGGATCGGTTAGAAATGG 58.135 41.667 0.00 0.00 0.00 3.16
1887 4997 7.986085 ATTCATTAGGGATCGGTTAGAAATG 57.014 36.000 0.00 0.00 0.00 2.32
1888 4998 9.101325 TCTATTCATTAGGGATCGGTTAGAAAT 57.899 33.333 0.00 0.00 0.00 2.17
1889 4999 8.486942 TCTATTCATTAGGGATCGGTTAGAAA 57.513 34.615 0.00 0.00 0.00 2.52
1890 5000 7.178628 CCTCTATTCATTAGGGATCGGTTAGAA 59.821 40.741 0.00 0.00 28.74 2.10
1891 5001 6.663953 CCTCTATTCATTAGGGATCGGTTAGA 59.336 42.308 0.00 0.00 28.74 2.10
1892 5002 6.663953 TCCTCTATTCATTAGGGATCGGTTAG 59.336 42.308 0.00 0.00 28.74 2.34
1893 5003 6.558498 TCCTCTATTCATTAGGGATCGGTTA 58.442 40.000 0.00 0.00 28.74 2.85
1894 5004 5.403512 TCCTCTATTCATTAGGGATCGGTT 58.596 41.667 0.00 0.00 28.74 4.44
1895 5005 5.011982 TCCTCTATTCATTAGGGATCGGT 57.988 43.478 0.00 0.00 28.74 4.69
1896 5006 4.404073 CCTCCTCTATTCATTAGGGATCGG 59.596 50.000 0.00 0.00 31.10 4.18
1897 5007 5.265191 TCCTCCTCTATTCATTAGGGATCG 58.735 45.833 0.00 0.00 31.10 3.69
1898 5008 7.013846 CGTATCCTCCTCTATTCATTAGGGATC 59.986 44.444 0.00 0.00 31.52 3.36
1899 5009 6.836527 CGTATCCTCCTCTATTCATTAGGGAT 59.163 42.308 0.00 0.00 32.88 3.85
1900 5010 6.188407 CGTATCCTCCTCTATTCATTAGGGA 58.812 44.000 0.00 0.00 28.74 4.20
1901 5011 5.361285 CCGTATCCTCCTCTATTCATTAGGG 59.639 48.000 0.00 0.00 0.00 3.53
1902 5012 5.952947 ACCGTATCCTCCTCTATTCATTAGG 59.047 44.000 0.00 0.00 0.00 2.69
1903 5013 8.047911 TCTACCGTATCCTCCTCTATTCATTAG 58.952 40.741 0.00 0.00 0.00 1.73
1904 5014 7.925622 TCTACCGTATCCTCCTCTATTCATTA 58.074 38.462 0.00 0.00 0.00 1.90
1905 5015 6.791371 TCTACCGTATCCTCCTCTATTCATT 58.209 40.000 0.00 0.00 0.00 2.57
1906 5016 6.012333 ACTCTACCGTATCCTCCTCTATTCAT 60.012 42.308 0.00 0.00 0.00 2.57
1907 5017 5.310068 ACTCTACCGTATCCTCCTCTATTCA 59.690 44.000 0.00 0.00 0.00 2.57
1908 5018 5.807909 ACTCTACCGTATCCTCCTCTATTC 58.192 45.833 0.00 0.00 0.00 1.75
1909 5019 5.846528 ACTCTACCGTATCCTCCTCTATT 57.153 43.478 0.00 0.00 0.00 1.73
1910 5020 6.949117 TTACTCTACCGTATCCTCCTCTAT 57.051 41.667 0.00 0.00 0.00 1.98
1911 5021 6.328672 AGTTTACTCTACCGTATCCTCCTCTA 59.671 42.308 0.00 0.00 0.00 2.43
1912 5022 5.132480 AGTTTACTCTACCGTATCCTCCTCT 59.868 44.000 0.00 0.00 0.00 3.69
1913 5023 5.375773 AGTTTACTCTACCGTATCCTCCTC 58.624 45.833 0.00 0.00 0.00 3.71
1914 5024 5.375773 GAGTTTACTCTACCGTATCCTCCT 58.624 45.833 2.66 0.00 39.81 3.69
1915 5025 5.687770 GAGTTTACTCTACCGTATCCTCC 57.312 47.826 2.66 0.00 39.81 4.30
1945 5055 9.780186 GCCAAATCTTAGTGGAGTAAATATACT 57.220 33.333 0.00 0.00 45.10 2.12
1946 5056 9.000486 GGCCAAATCTTAGTGGAGTAAATATAC 58.000 37.037 0.00 0.00 37.03 1.47
1947 5057 7.876068 CGGCCAAATCTTAGTGGAGTAAATATA 59.124 37.037 2.24 0.00 37.03 0.86
1948 5058 6.710744 CGGCCAAATCTTAGTGGAGTAAATAT 59.289 38.462 2.24 0.00 37.03 1.28
1949 5059 6.053005 CGGCCAAATCTTAGTGGAGTAAATA 58.947 40.000 2.24 0.00 37.03 1.40
1950 5060 4.881850 CGGCCAAATCTTAGTGGAGTAAAT 59.118 41.667 2.24 0.00 37.03 1.40
1951 5061 4.258543 CGGCCAAATCTTAGTGGAGTAAA 58.741 43.478 2.24 0.00 37.03 2.01
1952 5062 3.370103 CCGGCCAAATCTTAGTGGAGTAA 60.370 47.826 2.24 0.00 37.03 2.24
1953 5063 2.169769 CCGGCCAAATCTTAGTGGAGTA 59.830 50.000 2.24 0.00 37.03 2.59
1954 5064 1.065418 CCGGCCAAATCTTAGTGGAGT 60.065 52.381 2.24 0.00 37.03 3.85
1955 5065 1.209504 TCCGGCCAAATCTTAGTGGAG 59.790 52.381 2.24 0.00 37.03 3.86
1956 5066 1.065709 GTCCGGCCAAATCTTAGTGGA 60.066 52.381 2.24 0.00 37.03 4.02
1957 5067 1.379527 GTCCGGCCAAATCTTAGTGG 58.620 55.000 2.24 0.00 38.00 4.00
1958 5068 1.065418 AGGTCCGGCCAAATCTTAGTG 60.065 52.381 15.92 0.00 40.61 2.74
1959 5069 1.286248 AGGTCCGGCCAAATCTTAGT 58.714 50.000 15.92 0.00 40.61 2.24
1960 5070 2.807108 GCTAGGTCCGGCCAAATCTTAG 60.807 54.545 15.92 9.11 40.61 2.18
1961 5071 1.140252 GCTAGGTCCGGCCAAATCTTA 59.860 52.381 15.92 0.00 40.61 2.10
1962 5072 0.107165 GCTAGGTCCGGCCAAATCTT 60.107 55.000 15.92 0.00 40.61 2.40
1963 5073 0.983378 AGCTAGGTCCGGCCAAATCT 60.983 55.000 15.92 0.00 40.61 2.40
1964 5074 0.533085 GAGCTAGGTCCGGCCAAATC 60.533 60.000 10.97 5.91 40.61 2.17
1965 5075 1.271840 TGAGCTAGGTCCGGCCAAAT 61.272 55.000 18.90 0.02 40.61 2.32
1966 5076 1.271840 ATGAGCTAGGTCCGGCCAAA 61.272 55.000 18.90 0.00 40.61 3.28
1967 5077 1.686325 GATGAGCTAGGTCCGGCCAA 61.686 60.000 18.90 0.00 40.61 4.52
1968 5078 2.041922 ATGAGCTAGGTCCGGCCA 60.042 61.111 18.90 1.00 40.61 5.36
1969 5079 2.737830 GATGAGCTAGGTCCGGCC 59.262 66.667 18.90 0.59 37.58 6.13
1970 5080 2.737830 GGATGAGCTAGGTCCGGC 59.262 66.667 18.90 8.13 0.00 6.13
1971 5081 2.210711 GGGGATGAGCTAGGTCCGG 61.211 68.421 18.90 0.00 32.71 5.14
1972 5082 0.112606 TAGGGGATGAGCTAGGTCCG 59.887 60.000 18.90 0.00 32.71 4.79
1973 5083 2.632763 ATAGGGGATGAGCTAGGTCC 57.367 55.000 18.90 4.56 0.00 4.46
1974 5084 7.557724 GTTAAATATAGGGGATGAGCTAGGTC 58.442 42.308 15.12 15.12 0.00 3.85
1975 5085 6.154706 CGTTAAATATAGGGGATGAGCTAGGT 59.845 42.308 0.00 0.00 0.00 3.08
1976 5086 6.407074 CCGTTAAATATAGGGGATGAGCTAGG 60.407 46.154 0.00 0.00 0.00 3.02
1977 5087 6.380274 TCCGTTAAATATAGGGGATGAGCTAG 59.620 42.308 0.00 0.00 0.00 3.42
1978 5088 6.258354 TCCGTTAAATATAGGGGATGAGCTA 58.742 40.000 0.00 0.00 0.00 3.32
1979 5089 5.091552 TCCGTTAAATATAGGGGATGAGCT 58.908 41.667 0.00 0.00 0.00 4.09
1980 5090 5.046520 ACTCCGTTAAATATAGGGGATGAGC 60.047 44.000 0.00 0.00 0.00 4.26
1981 5091 6.607004 ACTCCGTTAAATATAGGGGATGAG 57.393 41.667 0.00 0.00 0.00 2.90
1982 5092 8.495160 TTTACTCCGTTAAATATAGGGGATGA 57.505 34.615 0.00 0.00 0.00 2.92
1983 5093 9.162764 CATTTACTCCGTTAAATATAGGGGATG 57.837 37.037 0.00 0.00 0.00 3.51
1984 5094 8.887393 ACATTTACTCCGTTAAATATAGGGGAT 58.113 33.333 0.00 0.00 0.00 3.85
1985 5095 8.266363 ACATTTACTCCGTTAAATATAGGGGA 57.734 34.615 0.00 0.00 0.00 4.81
1986 5096 8.913487 AACATTTACTCCGTTAAATATAGGGG 57.087 34.615 0.00 0.00 0.00 4.79
1988 5098 9.659830 GCAAACATTTACTCCGTTAAATATAGG 57.340 33.333 0.00 0.00 0.00 2.57
1992 5102 9.968870 AAAAGCAAACATTTACTCCGTTAAATA 57.031 25.926 0.00 0.00 0.00 1.40
1993 5103 8.880878 AAAAGCAAACATTTACTCCGTTAAAT 57.119 26.923 0.00 0.00 0.00 1.40
1994 5104 8.705048 AAAAAGCAAACATTTACTCCGTTAAA 57.295 26.923 0.00 0.00 0.00 1.52
2017 5127 9.569122 AGGTAGTAGAATGCAAAGTTTAGAAAA 57.431 29.630 0.00 0.00 0.00 2.29
2018 5128 9.216117 GAGGTAGTAGAATGCAAAGTTTAGAAA 57.784 33.333 0.00 0.00 0.00 2.52
2019 5129 8.594550 AGAGGTAGTAGAATGCAAAGTTTAGAA 58.405 33.333 0.00 0.00 0.00 2.10
2020 5130 8.135382 AGAGGTAGTAGAATGCAAAGTTTAGA 57.865 34.615 0.00 0.00 0.00 2.10
2021 5131 8.254508 AGAGAGGTAGTAGAATGCAAAGTTTAG 58.745 37.037 0.00 0.00 0.00 1.85
2022 5132 8.135382 AGAGAGGTAGTAGAATGCAAAGTTTA 57.865 34.615 0.00 0.00 0.00 2.01
2023 5133 7.010339 AGAGAGGTAGTAGAATGCAAAGTTT 57.990 36.000 0.00 0.00 0.00 2.66
2024 5134 6.351456 GGAGAGAGGTAGTAGAATGCAAAGTT 60.351 42.308 0.00 0.00 0.00 2.66
2025 5135 5.128008 GGAGAGAGGTAGTAGAATGCAAAGT 59.872 44.000 0.00 0.00 0.00 2.66
2026 5136 5.452636 GGGAGAGAGGTAGTAGAATGCAAAG 60.453 48.000 0.00 0.00 0.00 2.77
2027 5137 4.406003 GGGAGAGAGGTAGTAGAATGCAAA 59.594 45.833 0.00 0.00 0.00 3.68
2028 5138 3.961408 GGGAGAGAGGTAGTAGAATGCAA 59.039 47.826 0.00 0.00 0.00 4.08
2029 5139 3.052869 TGGGAGAGAGGTAGTAGAATGCA 60.053 47.826 0.00 0.00 0.00 3.96
2030 5140 3.567397 TGGGAGAGAGGTAGTAGAATGC 58.433 50.000 0.00 0.00 0.00 3.56
2031 5141 4.798882 ACTGGGAGAGAGGTAGTAGAATG 58.201 47.826 0.00 0.00 0.00 2.67
2032 5142 5.475398 AACTGGGAGAGAGGTAGTAGAAT 57.525 43.478 0.00 0.00 0.00 2.40
2033 5143 4.949966 AACTGGGAGAGAGGTAGTAGAA 57.050 45.455 0.00 0.00 0.00 2.10
2034 5144 4.949966 AAACTGGGAGAGAGGTAGTAGA 57.050 45.455 0.00 0.00 0.00 2.59
2035 5145 5.507637 TGTAAACTGGGAGAGAGGTAGTAG 58.492 45.833 0.00 0.00 0.00 2.57
2036 5146 5.525454 TGTAAACTGGGAGAGAGGTAGTA 57.475 43.478 0.00 0.00 0.00 1.82
2037 5147 4.399483 TGTAAACTGGGAGAGAGGTAGT 57.601 45.455 0.00 0.00 0.00 2.73
2038 5148 4.160626 CCTTGTAAACTGGGAGAGAGGTAG 59.839 50.000 0.00 0.00 0.00 3.18
2039 5149 4.094476 CCTTGTAAACTGGGAGAGAGGTA 58.906 47.826 0.00 0.00 0.00 3.08
2040 5150 2.907042 CCTTGTAAACTGGGAGAGAGGT 59.093 50.000 0.00 0.00 0.00 3.85
2041 5151 2.355209 GCCTTGTAAACTGGGAGAGAGG 60.355 54.545 0.00 0.00 0.00 3.69
2042 5152 2.675317 CGCCTTGTAAACTGGGAGAGAG 60.675 54.545 0.00 0.00 0.00 3.20
2043 5153 1.275291 CGCCTTGTAAACTGGGAGAGA 59.725 52.381 0.00 0.00 0.00 3.10
2044 5154 1.002087 ACGCCTTGTAAACTGGGAGAG 59.998 52.381 0.00 0.00 0.00 3.20
2045 5155 1.053424 ACGCCTTGTAAACTGGGAGA 58.947 50.000 0.00 0.00 0.00 3.71
2046 5156 1.156736 CACGCCTTGTAAACTGGGAG 58.843 55.000 0.00 0.00 0.00 4.30
2047 5157 0.887387 GCACGCCTTGTAAACTGGGA 60.887 55.000 0.00 0.00 0.00 4.37
2048 5158 1.579429 GCACGCCTTGTAAACTGGG 59.421 57.895 0.00 0.00 0.00 4.45
2049 5159 1.206578 CGCACGCCTTGTAAACTGG 59.793 57.895 0.00 0.00 0.00 4.00
2050 5160 1.440353 GCGCACGCCTTGTAAACTG 60.440 57.895 0.30 0.00 34.56 3.16
2051 5161 2.943653 GCGCACGCCTTGTAAACT 59.056 55.556 0.30 0.00 34.56 2.66
2052 5162 2.498887 CGCGCACGCCTTGTAAAC 60.499 61.111 8.75 0.00 37.98 2.01
2053 5163 2.968156 ACGCGCACGCCTTGTAAA 60.968 55.556 5.73 0.00 45.53 2.01
2054 5164 3.707700 CACGCGCACGCCTTGTAA 61.708 61.111 5.73 0.00 45.53 2.41
2067 5177 4.509737 GACGACCTAGGGGCACGC 62.510 72.222 14.81 6.25 43.76 5.34
2068 5178 1.956629 ATTGACGACCTAGGGGCACG 61.957 60.000 14.81 14.81 39.93 5.34
2069 5179 0.252197 AATTGACGACCTAGGGGCAC 59.748 55.000 14.81 2.61 35.63 5.01
2070 5180 0.988832 AAATTGACGACCTAGGGGCA 59.011 50.000 14.81 0.74 35.63 5.36
2071 5181 1.065709 TCAAATTGACGACCTAGGGGC 60.066 52.381 14.81 3.61 35.63 5.80
2072 5182 2.629051 GTCAAATTGACGACCTAGGGG 58.371 52.381 14.81 7.16 37.67 4.79
2137 5247 9.574516 ACAGTTTGGAAATAGAACATCTAAAGT 57.425 29.630 0.00 0.00 31.96 2.66
2186 5296 8.637986 GGTTGCCAATTTTATCACCTTCATATA 58.362 33.333 0.00 0.00 0.00 0.86
2187 5297 7.345392 AGGTTGCCAATTTTATCACCTTCATAT 59.655 33.333 0.00 0.00 0.00 1.78
2188 5298 6.667414 AGGTTGCCAATTTTATCACCTTCATA 59.333 34.615 0.00 0.00 0.00 2.15
2189 5299 5.484998 AGGTTGCCAATTTTATCACCTTCAT 59.515 36.000 0.00 0.00 0.00 2.57
2190 5300 4.837860 AGGTTGCCAATTTTATCACCTTCA 59.162 37.500 0.00 0.00 0.00 3.02
2191 5301 5.405935 AGGTTGCCAATTTTATCACCTTC 57.594 39.130 0.00 0.00 0.00 3.46
2192 5302 5.422012 CCTAGGTTGCCAATTTTATCACCTT 59.578 40.000 0.00 0.00 0.00 3.50
2193 5303 4.956075 CCTAGGTTGCCAATTTTATCACCT 59.044 41.667 0.00 0.00 0.00 4.00
2194 5304 4.709886 ACCTAGGTTGCCAATTTTATCACC 59.290 41.667 9.21 0.00 0.00 4.02
2195 5305 5.914898 ACCTAGGTTGCCAATTTTATCAC 57.085 39.130 9.21 0.00 0.00 3.06
2196 5306 7.442969 CGTATACCTAGGTTGCCAATTTTATCA 59.557 37.037 22.11 0.00 0.00 2.15
2197 5307 7.572539 GCGTATACCTAGGTTGCCAATTTTATC 60.573 40.741 22.11 0.00 0.00 1.75
2198 5308 6.206048 GCGTATACCTAGGTTGCCAATTTTAT 59.794 38.462 22.11 5.71 0.00 1.40
2199 5309 5.528320 GCGTATACCTAGGTTGCCAATTTTA 59.472 40.000 22.11 0.00 0.00 1.52
2200 5310 4.337274 GCGTATACCTAGGTTGCCAATTTT 59.663 41.667 22.11 0.00 0.00 1.82
2201 5311 3.881089 GCGTATACCTAGGTTGCCAATTT 59.119 43.478 22.11 0.00 0.00 1.82
2202 5312 3.118186 TGCGTATACCTAGGTTGCCAATT 60.118 43.478 22.11 0.00 0.00 2.32
2203 5313 2.436542 TGCGTATACCTAGGTTGCCAAT 59.563 45.455 22.11 9.64 0.00 3.16
2204 5314 1.832366 TGCGTATACCTAGGTTGCCAA 59.168 47.619 22.11 0.75 0.00 4.52
2205 5315 1.487300 TGCGTATACCTAGGTTGCCA 58.513 50.000 22.11 1.21 0.00 4.92
2206 5316 2.833631 ATGCGTATACCTAGGTTGCC 57.166 50.000 22.11 7.02 0.00 4.52
2207 5317 3.508793 TCCTATGCGTATACCTAGGTTGC 59.491 47.826 22.11 18.70 33.81 4.17
2208 5318 4.765856 AGTCCTATGCGTATACCTAGGTTG 59.234 45.833 22.11 9.15 33.81 3.77
2209 5319 4.995536 AGTCCTATGCGTATACCTAGGTT 58.004 43.478 22.11 10.62 33.81 3.50
2210 5320 4.654389 AGTCCTATGCGTATACCTAGGT 57.346 45.455 20.57 20.57 33.81 3.08
2211 5321 5.979288 AAAGTCCTATGCGTATACCTAGG 57.021 43.478 7.41 7.41 33.46 3.02
2212 5322 9.189723 GTTTAAAAGTCCTATGCGTATACCTAG 57.810 37.037 0.00 0.00 0.00 3.02
2213 5323 8.917088 AGTTTAAAAGTCCTATGCGTATACCTA 58.083 33.333 0.00 0.00 0.00 3.08
2214 5324 7.709613 CAGTTTAAAAGTCCTATGCGTATACCT 59.290 37.037 0.00 0.00 0.00 3.08
2215 5325 7.707893 TCAGTTTAAAAGTCCTATGCGTATACC 59.292 37.037 0.00 0.00 0.00 2.73
2216 5326 8.638685 TCAGTTTAAAAGTCCTATGCGTATAC 57.361 34.615 0.00 0.00 0.00 1.47
2217 5327 9.656040 TTTCAGTTTAAAAGTCCTATGCGTATA 57.344 29.630 0.00 0.00 0.00 1.47
2218 5328 8.448615 GTTTCAGTTTAAAAGTCCTATGCGTAT 58.551 33.333 0.00 0.00 0.00 3.06
2219 5329 7.359431 CGTTTCAGTTTAAAAGTCCTATGCGTA 60.359 37.037 0.00 0.00 0.00 4.42
2220 5330 6.565247 CGTTTCAGTTTAAAAGTCCTATGCGT 60.565 38.462 0.00 0.00 0.00 5.24
2221 5331 5.788531 CGTTTCAGTTTAAAAGTCCTATGCG 59.211 40.000 0.00 0.00 0.00 4.73
2222 5332 6.072893 TCCGTTTCAGTTTAAAAGTCCTATGC 60.073 38.462 0.00 0.00 0.00 3.14
2223 5333 7.360946 CCTCCGTTTCAGTTTAAAAGTCCTATG 60.361 40.741 0.00 0.00 0.00 2.23
2224 5334 6.653740 CCTCCGTTTCAGTTTAAAAGTCCTAT 59.346 38.462 0.00 0.00 0.00 2.57
2225 5335 5.993441 CCTCCGTTTCAGTTTAAAAGTCCTA 59.007 40.000 0.00 0.00 0.00 2.94
2226 5336 4.820173 CCTCCGTTTCAGTTTAAAAGTCCT 59.180 41.667 0.00 0.00 0.00 3.85
2227 5337 4.577693 ACCTCCGTTTCAGTTTAAAAGTCC 59.422 41.667 0.00 0.00 0.00 3.85
2228 5338 5.746307 ACCTCCGTTTCAGTTTAAAAGTC 57.254 39.130 0.00 0.00 0.00 3.01
2229 5339 6.351711 ACTACCTCCGTTTCAGTTTAAAAGT 58.648 36.000 0.00 0.00 0.00 2.66
2230 5340 6.856135 ACTACCTCCGTTTCAGTTTAAAAG 57.144 37.500 0.00 0.00 0.00 2.27
2231 5341 7.500141 ACTACTACCTCCGTTTCAGTTTAAAA 58.500 34.615 0.00 0.00 0.00 1.52
2232 5342 7.054491 ACTACTACCTCCGTTTCAGTTTAAA 57.946 36.000 0.00 0.00 0.00 1.52
2233 5343 6.655078 ACTACTACCTCCGTTTCAGTTTAA 57.345 37.500 0.00 0.00 0.00 1.52
2234 5344 7.944729 ATACTACTACCTCCGTTTCAGTTTA 57.055 36.000 0.00 0.00 0.00 2.01
2235 5345 6.847421 ATACTACTACCTCCGTTTCAGTTT 57.153 37.500 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.