Multiple sequence alignment - TraesCS3A01G055400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G055400 chr3A 100.000 4020 0 0 1 4020 32141471 32145490 0.000000e+00 7424.0
1 TraesCS3A01G055400 chr3A 83.880 701 70 26 5 686 710404319 710403643 2.640000e-176 628.0
2 TraesCS3A01G055400 chr3A 83.618 702 71 19 5 686 710464352 710463675 1.590000e-173 619.0
3 TraesCS3A01G055400 chr3D 86.589 2237 179 59 1783 3920 22376284 22378498 0.000000e+00 2357.0
4 TraesCS3A01G055400 chr3D 92.951 610 36 4 919 1522 22375646 22376254 0.000000e+00 881.0
5 TraesCS3A01G055400 chr3D 89.086 678 43 9 3257 3914 23056570 23057236 0.000000e+00 813.0
6 TraesCS3A01G055400 chr3D 90.635 598 48 7 2685 3280 23055914 23056505 0.000000e+00 787.0
7 TraesCS3A01G055400 chr3D 89.268 615 49 12 923 1532 23054256 23054858 0.000000e+00 754.0
8 TraesCS3A01G055400 chr3D 85.081 677 59 15 1803 2448 22384627 22385292 0.000000e+00 652.0
9 TraesCS3A01G055400 chr3D 87.456 566 53 15 2667 3220 22386053 22386612 1.580000e-178 636.0
10 TraesCS3A01G055400 chr3D 85.122 531 40 8 1783 2302 23054850 23055352 1.290000e-139 507.0
11 TraesCS3A01G055400 chr3D 86.585 328 23 9 2337 2645 23055525 23055850 3.850000e-90 342.0
12 TraesCS3A01G055400 chr3D 92.357 157 10 1 772 928 22375467 22375621 5.230000e-54 222.0
13 TraesCS3A01G055400 chr3D 84.753 223 23 5 2075 2286 22725750 22725528 3.150000e-51 213.0
14 TraesCS3A01G055400 chr3D 85.167 209 29 2 1313 1519 22726234 22726026 3.150000e-51 213.0
15 TraesCS3A01G055400 chr3D 88.811 143 15 1 2494 2635 22385921 22386063 1.490000e-39 174.0
16 TraesCS3A01G055400 chr3B 88.136 826 75 18 2408 3220 39807008 39806193 0.000000e+00 961.0
17 TraesCS3A01G055400 chr3B 86.910 848 66 17 3106 3920 40234207 40235042 0.000000e+00 909.0
18 TraesCS3A01G055400 chr3B 84.910 835 58 28 1783 2583 40232245 40233045 0.000000e+00 782.0
19 TraesCS3A01G055400 chr3B 86.630 546 52 17 997 1532 40231719 40232253 5.790000e-163 584.0
20 TraesCS3A01G055400 chr3B 90.741 432 31 5 2685 3113 40233614 40234039 5.830000e-158 568.0
21 TraesCS3A01G055400 chr3B 83.529 510 40 23 2176 2644 40233043 40233549 1.720000e-118 436.0
22 TraesCS3A01G055400 chr3B 87.761 335 39 1 1138 1472 95900222 95900554 1.350000e-104 390.0
23 TraesCS3A01G055400 chr3B 86.692 263 25 5 1974 2226 95900554 95900816 2.370000e-72 283.0
24 TraesCS3A01G055400 chr1A 91.014 690 48 11 1 686 578752569 578753248 0.000000e+00 918.0
25 TraesCS3A01G055400 chr1A 87.761 335 39 1 1138 1472 427395680 427396012 1.350000e-104 390.0
26 TraesCS3A01G055400 chr1A 87.761 335 39 1 1138 1472 529310523 529310855 1.350000e-104 390.0
27 TraesCS3A01G055400 chr1A 89.313 262 17 7 1974 2226 526135531 526135272 6.480000e-83 318.0
28 TraesCS3A01G055400 chr1A 86.131 137 12 5 2097 2226 406350949 406351085 1.510000e-29 141.0
29 TraesCS3A01G055400 chr4A 90.173 692 61 5 1 686 455650383 455651073 0.000000e+00 894.0
30 TraesCS3A01G055400 chr4A 90.043 693 56 11 1 690 26675980 26675298 0.000000e+00 885.0
31 TraesCS3A01G055400 chr4A 91.288 264 20 3 1527 1788 104373316 104373054 1.370000e-94 357.0
32 TraesCS3A01G055400 chr4A 91.255 263 20 2 1528 1788 425964752 425965013 4.940000e-94 355.0
33 TraesCS3A01G055400 chrUn 89.957 697 54 7 1 690 349112191 349111504 0.000000e+00 885.0
34 TraesCS3A01G055400 chrUn 90.029 692 50 10 1 690 243398557 243397883 0.000000e+00 878.0
35 TraesCS3A01G055400 chrUn 90.029 692 50 10 1 690 267336485 267337159 0.000000e+00 878.0
36 TraesCS3A01G055400 chr7A 89.956 687 64 4 1 686 639782677 639781995 0.000000e+00 881.0
37 TraesCS3A01G055400 chr7A 88.252 698 68 8 1 695 223683075 223682389 0.000000e+00 822.0
38 TraesCS3A01G055400 chr7A 88.302 265 17 8 1974 2226 17964209 17963947 5.050000e-79 305.0
39 TraesCS3A01G055400 chr7A 87.925 265 18 7 1974 2226 35743285 35743547 2.350000e-77 300.0
40 TraesCS3A01G055400 chr2D 88.633 695 65 9 1 686 633085301 633084612 0.000000e+00 833.0
41 TraesCS3A01G055400 chr2D 91.255 263 20 2 1528 1788 602714076 602713815 4.940000e-94 355.0
42 TraesCS3A01G055400 chr6B 92.776 263 16 2 1529 1789 113783176 113783437 1.050000e-100 377.0
43 TraesCS3A01G055400 chr6B 84.776 335 47 2 1138 1472 125201405 125201075 2.320000e-87 333.0
44 TraesCS3A01G055400 chr6B 87.833 263 21 6 1974 2225 125201075 125200813 8.450000e-77 298.0
45 TraesCS3A01G055400 chr5A 92.105 266 18 2 1525 1788 386169518 386169782 4.910000e-99 372.0
46 TraesCS3A01G055400 chr5A 91.078 269 20 3 1523 1788 476902535 476902268 1.060000e-95 361.0
47 TraesCS3A01G055400 chr5A 90.741 270 22 2 1524 1791 548500645 548500913 1.370000e-94 357.0
48 TraesCS3A01G055400 chr6D 91.603 262 20 1 1529 1788 454820676 454820415 1.060000e-95 361.0
49 TraesCS3A01G055400 chr4D 91.321 265 20 2 1526 1788 426205719 426205982 3.820000e-95 359.0
50 TraesCS3A01G055400 chr5D 87.220 313 32 5 1783 2090 62115648 62115339 2.300000e-92 350.0
51 TraesCS3A01G055400 chr5D 94.545 55 3 0 1186 1240 62115724 62115670 7.160000e-13 86.1
52 TraesCS3A01G055400 chr6A 85.985 264 24 7 1974 2226 44077066 44077327 1.840000e-68 270.0
53 TraesCS3A01G055400 chr4B 88.263 213 19 3 2020 2226 327134602 327134390 2.400000e-62 250.0
54 TraesCS3A01G055400 chr2B 86.364 132 16 1 1140 1271 73073248 73073119 4.190000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G055400 chr3A 32141471 32145490 4019 False 7424.000000 7424 100.000000 1 4020 1 chr3A.!!$F1 4019
1 TraesCS3A01G055400 chr3A 710403643 710404319 676 True 628.000000 628 83.880000 5 686 1 chr3A.!!$R1 681
2 TraesCS3A01G055400 chr3A 710463675 710464352 677 True 619.000000 619 83.618000 5 686 1 chr3A.!!$R2 681
3 TraesCS3A01G055400 chr3D 22375467 22378498 3031 False 1153.333333 2357 90.632333 772 3920 3 chr3D.!!$F1 3148
4 TraesCS3A01G055400 chr3D 23054256 23057236 2980 False 640.600000 813 88.139200 923 3914 5 chr3D.!!$F3 2991
5 TraesCS3A01G055400 chr3D 22384627 22386612 1985 False 487.333333 652 87.116000 1803 3220 3 chr3D.!!$F2 1417
6 TraesCS3A01G055400 chr3D 22725528 22726234 706 True 213.000000 213 84.960000 1313 2286 2 chr3D.!!$R1 973
7 TraesCS3A01G055400 chr3B 39806193 39807008 815 True 961.000000 961 88.136000 2408 3220 1 chr3B.!!$R1 812
8 TraesCS3A01G055400 chr3B 40231719 40235042 3323 False 655.800000 909 86.544000 997 3920 5 chr3B.!!$F1 2923
9 TraesCS3A01G055400 chr3B 95900222 95900816 594 False 336.500000 390 87.226500 1138 2226 2 chr3B.!!$F2 1088
10 TraesCS3A01G055400 chr1A 578752569 578753248 679 False 918.000000 918 91.014000 1 686 1 chr1A.!!$F4 685
11 TraesCS3A01G055400 chr4A 455650383 455651073 690 False 894.000000 894 90.173000 1 686 1 chr4A.!!$F2 685
12 TraesCS3A01G055400 chr4A 26675298 26675980 682 True 885.000000 885 90.043000 1 690 1 chr4A.!!$R1 689
13 TraesCS3A01G055400 chrUn 349111504 349112191 687 True 885.000000 885 89.957000 1 690 1 chrUn.!!$R2 689
14 TraesCS3A01G055400 chrUn 243397883 243398557 674 True 878.000000 878 90.029000 1 690 1 chrUn.!!$R1 689
15 TraesCS3A01G055400 chrUn 267336485 267337159 674 False 878.000000 878 90.029000 1 690 1 chrUn.!!$F1 689
16 TraesCS3A01G055400 chr7A 639781995 639782677 682 True 881.000000 881 89.956000 1 686 1 chr7A.!!$R3 685
17 TraesCS3A01G055400 chr7A 223682389 223683075 686 True 822.000000 822 88.252000 1 695 1 chr7A.!!$R2 694
18 TraesCS3A01G055400 chr2D 633084612 633085301 689 True 833.000000 833 88.633000 1 686 1 chr2D.!!$R2 685
19 TraesCS3A01G055400 chr6B 125200813 125201405 592 True 315.500000 333 86.304500 1138 2225 2 chr6B.!!$R1 1087

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 803 0.106918 ACTTGAGTGGTTTTCGGGCA 60.107 50.0 0.0 0.0 0.00 5.36 F
1543 1654 0.106116 GATGTACTCCCTCCGGTCCT 60.106 60.0 0.0 0.0 0.00 3.85 F
1551 1662 0.178973 CCCTCCGGTCCTTTTTGGTT 60.179 55.0 0.0 0.0 37.07 3.67 F
1555 1666 0.461961 CCGGTCCTTTTTGGTTTGCA 59.538 50.0 0.0 0.0 37.07 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2367 2661 0.034059 GTACCTCATCGATGGCCCTG 59.966 60.0 24.61 11.30 0.0 4.45 R
2368 2662 0.105453 AGTACCTCATCGATGGCCCT 60.105 55.0 24.61 10.99 0.0 5.19 R
2635 3968 0.445436 GCATGAAACTGAGAGCACCG 59.555 55.0 0.00 0.00 0.0 4.94 R
3308 4945 0.589223 GTTCCGCAATGTCACCGAAA 59.411 50.0 0.00 0.00 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
340 372 2.593978 CGTACGAGGGAGGGGAGA 59.406 66.667 10.44 0.00 0.00 3.71
575 637 3.259020 CGCCGGCGCTAAATTCGA 61.259 61.111 38.48 0.00 0.00 3.71
576 638 2.594962 CGCCGGCGCTAAATTCGAT 61.595 57.895 38.48 0.00 0.00 3.59
582 644 0.868406 GCGCTAAATTCGATCCAGGG 59.132 55.000 0.00 0.00 0.00 4.45
584 646 1.810031 CGCTAAATTCGATCCAGGGCA 60.810 52.381 0.00 0.00 0.00 5.36
606 669 2.211468 GAAAATCGGGCTCCTGGGGT 62.211 60.000 0.00 0.00 0.00 4.95
607 670 1.800229 AAAATCGGGCTCCTGGGGTT 61.800 55.000 0.00 0.00 0.00 4.11
614 677 2.656069 GCTCCTGGGGTTGCGACTA 61.656 63.158 3.59 0.00 0.00 2.59
628 691 1.735571 GCGACTAGGCCGATTTTTCAA 59.264 47.619 10.39 0.00 0.00 2.69
631 694 2.740447 GACTAGGCCGATTTTTCAACGT 59.260 45.455 0.00 0.00 0.00 3.99
637 700 0.162082 CGATTTTTCAACGTCGGCGA 59.838 50.000 20.03 4.99 42.00 5.54
672 736 1.536662 AGAGGCCTTTCTGGGACGT 60.537 57.895 6.77 0.00 39.91 4.34
686 750 1.078848 GACGTGGCTGGAGATGCTT 60.079 57.895 0.00 0.00 0.00 3.91
692 756 1.074405 TGGCTGGAGATGCTTTGAGTT 59.926 47.619 0.00 0.00 0.00 3.01
695 759 2.693069 CTGGAGATGCTTTGAGTTCGT 58.307 47.619 0.00 0.00 0.00 3.85
696 760 3.849911 CTGGAGATGCTTTGAGTTCGTA 58.150 45.455 0.00 0.00 0.00 3.43
697 761 3.585862 TGGAGATGCTTTGAGTTCGTAC 58.414 45.455 0.00 0.00 0.00 3.67
698 762 3.006430 TGGAGATGCTTTGAGTTCGTACA 59.994 43.478 0.00 0.00 0.00 2.90
699 763 4.184629 GGAGATGCTTTGAGTTCGTACAT 58.815 43.478 0.00 0.00 0.00 2.29
700 764 4.631813 GGAGATGCTTTGAGTTCGTACATT 59.368 41.667 0.00 0.00 0.00 2.71
701 765 5.446473 GGAGATGCTTTGAGTTCGTACATTG 60.446 44.000 0.00 0.00 0.00 2.82
702 766 4.393062 AGATGCTTTGAGTTCGTACATTGG 59.607 41.667 0.00 0.00 0.00 3.16
703 767 2.811431 TGCTTTGAGTTCGTACATTGGG 59.189 45.455 0.00 0.00 0.00 4.12
704 768 2.414161 GCTTTGAGTTCGTACATTGGGC 60.414 50.000 0.00 0.00 0.00 5.36
705 769 1.816074 TTGAGTTCGTACATTGGGCC 58.184 50.000 0.00 0.00 0.00 5.80
706 770 0.390603 TGAGTTCGTACATTGGGCCG 60.391 55.000 0.00 0.00 0.00 6.13
707 771 1.078708 AGTTCGTACATTGGGCCGG 60.079 57.895 0.00 0.00 0.00 6.13
708 772 2.437002 TTCGTACATTGGGCCGGC 60.437 61.111 21.18 21.18 0.00 6.13
709 773 2.961893 TTCGTACATTGGGCCGGCT 61.962 57.895 28.56 7.78 0.00 5.52
710 774 1.615165 TTCGTACATTGGGCCGGCTA 61.615 55.000 28.56 13.55 0.00 3.93
711 775 1.070786 CGTACATTGGGCCGGCTAT 59.929 57.895 28.56 14.67 0.00 2.97
712 776 1.227999 CGTACATTGGGCCGGCTATG 61.228 60.000 28.56 26.28 0.00 2.23
713 777 0.107831 GTACATTGGGCCGGCTATGA 59.892 55.000 29.95 16.13 0.00 2.15
714 778 0.396435 TACATTGGGCCGGCTATGAG 59.604 55.000 29.95 20.05 0.00 2.90
715 779 1.601759 CATTGGGCCGGCTATGAGG 60.602 63.158 28.56 8.14 0.00 3.86
716 780 2.833913 ATTGGGCCGGCTATGAGGG 61.834 63.158 28.56 0.00 0.00 4.30
717 781 4.815973 TGGGCCGGCTATGAGGGT 62.816 66.667 28.56 0.00 0.00 4.34
718 782 3.942439 GGGCCGGCTATGAGGGTC 61.942 72.222 28.56 5.59 0.00 4.46
719 783 4.301027 GGCCGGCTATGAGGGTCG 62.301 72.222 28.56 0.00 0.00 4.79
720 784 3.224324 GCCGGCTATGAGGGTCGA 61.224 66.667 22.15 0.00 33.29 4.20
721 785 2.728817 CCGGCTATGAGGGTCGAC 59.271 66.667 7.13 7.13 33.29 4.20
722 786 1.828660 CCGGCTATGAGGGTCGACT 60.829 63.158 16.46 0.00 33.29 4.18
723 787 1.392710 CCGGCTATGAGGGTCGACTT 61.393 60.000 16.46 4.01 33.29 3.01
724 788 0.249073 CGGCTATGAGGGTCGACTTG 60.249 60.000 16.46 0.00 33.29 3.16
725 789 1.112113 GGCTATGAGGGTCGACTTGA 58.888 55.000 16.46 0.00 0.00 3.02
726 790 1.067821 GGCTATGAGGGTCGACTTGAG 59.932 57.143 16.46 5.89 0.00 3.02
727 791 1.751924 GCTATGAGGGTCGACTTGAGT 59.248 52.381 16.46 2.20 0.00 3.41
728 792 2.480416 GCTATGAGGGTCGACTTGAGTG 60.480 54.545 16.46 2.38 0.00 3.51
729 793 0.898320 ATGAGGGTCGACTTGAGTGG 59.102 55.000 16.46 0.00 0.00 4.00
730 794 0.469331 TGAGGGTCGACTTGAGTGGT 60.469 55.000 16.46 0.00 0.00 4.16
731 795 0.680061 GAGGGTCGACTTGAGTGGTT 59.320 55.000 16.46 0.00 0.00 3.67
732 796 1.070289 GAGGGTCGACTTGAGTGGTTT 59.930 52.381 16.46 0.00 0.00 3.27
733 797 1.489230 AGGGTCGACTTGAGTGGTTTT 59.511 47.619 16.46 0.00 0.00 2.43
734 798 1.871676 GGGTCGACTTGAGTGGTTTTC 59.128 52.381 16.46 0.00 0.00 2.29
735 799 1.525619 GGTCGACTTGAGTGGTTTTCG 59.474 52.381 16.46 0.00 0.00 3.46
736 800 1.525619 GTCGACTTGAGTGGTTTTCGG 59.474 52.381 8.70 0.00 0.00 4.30
737 801 0.865769 CGACTTGAGTGGTTTTCGGG 59.134 55.000 0.00 0.00 0.00 5.14
738 802 0.591659 GACTTGAGTGGTTTTCGGGC 59.408 55.000 0.00 0.00 0.00 6.13
739 803 0.106918 ACTTGAGTGGTTTTCGGGCA 60.107 50.000 0.00 0.00 0.00 5.36
740 804 0.593128 CTTGAGTGGTTTTCGGGCAG 59.407 55.000 0.00 0.00 0.00 4.85
741 805 1.452145 TTGAGTGGTTTTCGGGCAGC 61.452 55.000 0.00 0.00 0.00 5.25
742 806 2.597510 AGTGGTTTTCGGGCAGCC 60.598 61.111 1.26 1.26 0.00 4.85
743 807 2.909965 GTGGTTTTCGGGCAGCCA 60.910 61.111 15.19 0.00 0.00 4.75
744 808 2.597217 TGGTTTTCGGGCAGCCAG 60.597 61.111 15.19 10.09 0.00 4.85
745 809 2.597510 GGTTTTCGGGCAGCCAGT 60.598 61.111 15.19 0.00 0.00 4.00
746 810 2.626780 GGTTTTCGGGCAGCCAGTC 61.627 63.158 15.19 0.00 0.00 3.51
747 811 2.668212 TTTTCGGGCAGCCAGTCG 60.668 61.111 15.19 8.11 0.00 4.18
748 812 3.469863 TTTTCGGGCAGCCAGTCGT 62.470 57.895 15.19 0.00 0.00 4.34
749 813 4.680237 TTCGGGCAGCCAGTCGTG 62.680 66.667 15.19 0.00 0.00 4.35
753 817 4.664677 GGCAGCCAGTCGTGACGT 62.665 66.667 6.55 0.00 36.20 4.34
754 818 3.106407 GCAGCCAGTCGTGACGTC 61.106 66.667 9.11 9.11 36.20 4.34
755 819 2.645567 CAGCCAGTCGTGACGTCT 59.354 61.111 17.92 0.86 36.20 4.18
756 820 1.730902 CAGCCAGTCGTGACGTCTG 60.731 63.158 21.93 21.93 41.17 3.51
760 824 4.039357 AGTCGTGACGTCTGGCGG 62.039 66.667 17.92 1.55 46.52 6.13
761 825 4.034258 GTCGTGACGTCTGGCGGA 62.034 66.667 17.92 3.97 46.52 5.54
762 826 3.060000 TCGTGACGTCTGGCGGAT 61.060 61.111 17.92 0.00 46.52 4.18
763 827 1.746239 TCGTGACGTCTGGCGGATA 60.746 57.895 17.92 0.95 46.52 2.59
764 828 1.585521 CGTGACGTCTGGCGGATAC 60.586 63.158 17.92 2.65 46.52 2.24
765 829 1.509463 GTGACGTCTGGCGGATACA 59.491 57.895 17.92 0.00 46.52 2.29
766 830 0.525668 GTGACGTCTGGCGGATACAG 60.526 60.000 17.92 0.00 46.52 2.74
767 831 1.065928 GACGTCTGGCGGATACAGG 59.934 63.158 8.70 0.00 46.52 4.00
768 832 2.351336 GACGTCTGGCGGATACAGGG 62.351 65.000 8.70 0.00 46.52 4.45
769 833 2.423898 CGTCTGGCGGATACAGGGT 61.424 63.158 0.00 0.00 36.62 4.34
770 834 1.442148 GTCTGGCGGATACAGGGTC 59.558 63.158 0.00 0.00 36.62 4.46
782 846 0.252421 ACAGGGTCCAGATGCTCTCA 60.252 55.000 0.00 0.00 0.00 3.27
799 863 4.320494 GCTCTCACATCGTTCAAACCAAAT 60.320 41.667 0.00 0.00 0.00 2.32
804 868 5.180492 TCACATCGTTCAAACCAAATAGGAC 59.820 40.000 0.00 0.00 41.22 3.85
806 870 5.181245 ACATCGTTCAAACCAAATAGGACAG 59.819 40.000 0.00 0.00 41.22 3.51
809 873 5.823570 TCGTTCAAACCAAATAGGACAGAAA 59.176 36.000 0.00 0.00 41.22 2.52
831 895 2.124570 CAGGCTCAACCCATCCCG 60.125 66.667 0.00 0.00 40.58 5.14
841 905 2.046314 CCATCCCGTTTGCGACCT 60.046 61.111 0.00 0.00 41.33 3.85
842 906 1.219664 CCATCCCGTTTGCGACCTA 59.780 57.895 0.00 0.00 41.33 3.08
876 940 2.344203 CGCCGTCTCCTCTCCTGTT 61.344 63.158 0.00 0.00 0.00 3.16
909 973 4.144681 CGCGCTGCTGCTCAAGAC 62.145 66.667 14.03 0.00 36.97 3.01
975 1074 4.009370 AGAAAAAGGGGAAGAAGAGACG 57.991 45.455 0.00 0.00 0.00 4.18
976 1075 2.186532 AAAAGGGGAAGAAGAGACGC 57.813 50.000 0.00 0.00 0.00 5.19
981 1080 0.673956 GGGAAGAAGAGACGCAACCC 60.674 60.000 0.00 0.00 0.00 4.11
1100 1199 3.148279 CCCCCTCGTCCTCCTTCG 61.148 72.222 0.00 0.00 0.00 3.79
1103 1202 3.068691 CCTCGTCCTCCTTCGCCA 61.069 66.667 0.00 0.00 0.00 5.69
1105 1204 3.358076 CTCGTCCTCCTTCGCCACC 62.358 68.421 0.00 0.00 0.00 4.61
1121 1220 4.052229 CCGCTTCCGTGACCTCGT 62.052 66.667 0.00 0.00 0.00 4.18
1154 1257 2.300152 CTGGACAGAGTTCCTGCTTGTA 59.700 50.000 0.00 0.00 46.81 2.41
1271 1376 1.301716 CTGGTACTGTGCCGCACTT 60.302 57.895 23.52 13.23 35.11 3.16
1314 1424 2.543031 CCAATTGCTGCGATTGAGGATG 60.543 50.000 33.71 18.47 37.41 3.51
1321 1431 1.406180 TGCGATTGAGGATGCCAATTG 59.594 47.619 0.00 0.00 38.06 2.32
1335 1445 2.791158 GCCAATTGGTTAAGTCGATGCG 60.791 50.000 25.19 0.00 37.57 4.73
1369 1480 4.754667 GTGTTCCCGGTCCTCGCC 62.755 72.222 0.00 0.00 37.59 5.54
1528 1639 8.954950 CAGAGAATTGTTATTACTCTGGATGT 57.045 34.615 0.00 0.00 45.86 3.06
1533 1644 9.262358 GAATTGTTATTACTCTGGATGTACTCC 57.738 37.037 0.00 0.00 45.19 3.85
1534 1645 6.726490 TGTTATTACTCTGGATGTACTCCC 57.274 41.667 8.36 3.66 44.23 4.30
1535 1646 6.441222 TGTTATTACTCTGGATGTACTCCCT 58.559 40.000 8.36 0.00 44.23 4.20
1536 1647 6.550108 TGTTATTACTCTGGATGTACTCCCTC 59.450 42.308 8.36 0.00 44.23 4.30
1539 1650 0.106167 TCTGGATGTACTCCCTCCGG 60.106 60.000 0.00 0.00 44.23 5.14
1540 1651 0.397254 CTGGATGTACTCCCTCCGGT 60.397 60.000 0.00 0.00 44.23 5.28
1541 1652 0.396695 TGGATGTACTCCCTCCGGTC 60.397 60.000 0.00 0.00 44.23 4.79
1542 1653 1.114119 GGATGTACTCCCTCCGGTCC 61.114 65.000 0.00 0.00 38.19 4.46
1543 1654 0.106116 GATGTACTCCCTCCGGTCCT 60.106 60.000 0.00 0.00 0.00 3.85
1546 1657 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
1547 1658 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
1548 1659 0.400594 ACTCCCTCCGGTCCTTTTTG 59.599 55.000 0.00 0.00 0.00 2.44
1549 1660 0.322546 CTCCCTCCGGTCCTTTTTGG 60.323 60.000 0.00 0.00 37.10 3.28
1551 1662 0.178973 CCCTCCGGTCCTTTTTGGTT 60.179 55.000 0.00 0.00 37.07 3.67
1552 1663 1.699730 CCTCCGGTCCTTTTTGGTTT 58.300 50.000 0.00 0.00 37.07 3.27
1553 1664 1.339929 CCTCCGGTCCTTTTTGGTTTG 59.660 52.381 0.00 0.00 37.07 2.93
1554 1665 0.747852 TCCGGTCCTTTTTGGTTTGC 59.252 50.000 0.00 0.00 37.07 3.68
1555 1666 0.461961 CCGGTCCTTTTTGGTTTGCA 59.538 50.000 0.00 0.00 37.07 4.08
1556 1667 1.069978 CCGGTCCTTTTTGGTTTGCAT 59.930 47.619 0.00 0.00 37.07 3.96
1557 1668 2.297597 CCGGTCCTTTTTGGTTTGCATA 59.702 45.455 0.00 0.00 37.07 3.14
1558 1669 3.056179 CCGGTCCTTTTTGGTTTGCATAT 60.056 43.478 0.00 0.00 37.07 1.78
1559 1670 4.158764 CCGGTCCTTTTTGGTTTGCATATA 59.841 41.667 0.00 0.00 37.07 0.86
1560 1671 5.336849 CCGGTCCTTTTTGGTTTGCATATAA 60.337 40.000 0.00 0.00 37.07 0.98
1561 1672 6.159988 CGGTCCTTTTTGGTTTGCATATAAA 58.840 36.000 0.00 0.00 37.07 1.40
1562 1673 6.647067 CGGTCCTTTTTGGTTTGCATATAAAA 59.353 34.615 0.00 0.00 37.07 1.52
1563 1674 7.333174 CGGTCCTTTTTGGTTTGCATATAAAAT 59.667 33.333 0.00 0.00 37.07 1.82
1564 1675 9.008965 GGTCCTTTTTGGTTTGCATATAAAATT 57.991 29.630 0.00 0.00 37.07 1.82
1571 1682 9.770097 TTTGGTTTGCATATAAAATTTGTCTGA 57.230 25.926 0.00 0.00 0.00 3.27
1572 1683 9.770097 TTGGTTTGCATATAAAATTTGTCTGAA 57.230 25.926 0.00 0.00 0.00 3.02
1573 1684 9.421806 TGGTTTGCATATAAAATTTGTCTGAAG 57.578 29.630 0.00 0.00 0.00 3.02
1574 1685 9.423061 GGTTTGCATATAAAATTTGTCTGAAGT 57.577 29.630 0.00 0.00 0.00 3.01
1578 1689 9.844790 TGCATATAAAATTTGTCTGAAGTCAAG 57.155 29.630 0.00 0.00 0.00 3.02
1579 1690 8.801913 GCATATAAAATTTGTCTGAAGTCAAGC 58.198 33.333 0.00 0.00 0.00 4.01
1580 1691 9.294030 CATATAAAATTTGTCTGAAGTCAAGCC 57.706 33.333 0.00 0.00 0.00 4.35
1581 1692 5.859205 AAAATTTGTCTGAAGTCAAGCCT 57.141 34.783 0.00 0.00 0.00 4.58
1582 1693 5.444663 AAATTTGTCTGAAGTCAAGCCTC 57.555 39.130 0.00 0.00 0.00 4.70
1583 1694 2.154854 TTGTCTGAAGTCAAGCCTCG 57.845 50.000 0.00 0.00 0.00 4.63
1584 1695 1.040646 TGTCTGAAGTCAAGCCTCGT 58.959 50.000 0.00 0.00 0.00 4.18
1585 1696 2.235891 TGTCTGAAGTCAAGCCTCGTA 58.764 47.619 0.00 0.00 0.00 3.43
1586 1697 2.626266 TGTCTGAAGTCAAGCCTCGTAA 59.374 45.455 0.00 0.00 0.00 3.18
1587 1698 3.069016 TGTCTGAAGTCAAGCCTCGTAAA 59.931 43.478 0.00 0.00 0.00 2.01
1588 1699 4.056050 GTCTGAAGTCAAGCCTCGTAAAA 58.944 43.478 0.00 0.00 0.00 1.52
1589 1700 4.691216 GTCTGAAGTCAAGCCTCGTAAAAT 59.309 41.667 0.00 0.00 0.00 1.82
1590 1701 5.179555 GTCTGAAGTCAAGCCTCGTAAAATT 59.820 40.000 0.00 0.00 0.00 1.82
1591 1702 5.763204 TCTGAAGTCAAGCCTCGTAAAATTT 59.237 36.000 0.00 0.00 0.00 1.82
1592 1703 5.757886 TGAAGTCAAGCCTCGTAAAATTTG 58.242 37.500 0.00 0.00 0.00 2.32
1593 1704 5.529430 TGAAGTCAAGCCTCGTAAAATTTGA 59.471 36.000 0.00 0.00 0.00 2.69
1594 1705 5.358298 AGTCAAGCCTCGTAAAATTTGAC 57.642 39.130 6.98 6.98 42.72 3.18
1595 1706 4.215613 AGTCAAGCCTCGTAAAATTTGACC 59.784 41.667 10.51 0.00 43.15 4.02
1596 1707 4.023536 GTCAAGCCTCGTAAAATTTGACCA 60.024 41.667 0.00 0.00 38.79 4.02
1597 1708 4.580995 TCAAGCCTCGTAAAATTTGACCAA 59.419 37.500 0.00 0.00 0.00 3.67
1598 1709 4.499037 AGCCTCGTAAAATTTGACCAAC 57.501 40.909 0.00 0.00 0.00 3.77
1599 1710 4.142038 AGCCTCGTAAAATTTGACCAACT 58.858 39.130 0.00 0.00 0.00 3.16
1600 1711 4.583073 AGCCTCGTAAAATTTGACCAACTT 59.417 37.500 0.00 0.00 0.00 2.66
1601 1712 5.068591 AGCCTCGTAAAATTTGACCAACTTT 59.931 36.000 0.00 0.00 0.00 2.66
1602 1713 6.263617 AGCCTCGTAAAATTTGACCAACTTTA 59.736 34.615 0.00 0.00 0.00 1.85
1603 1714 7.039993 AGCCTCGTAAAATTTGACCAACTTTAT 60.040 33.333 0.00 0.00 0.00 1.40
1604 1715 8.238631 GCCTCGTAAAATTTGACCAACTTTATA 58.761 33.333 0.00 0.00 0.00 0.98
1605 1716 9.769093 CCTCGTAAAATTTGACCAACTTTATAG 57.231 33.333 0.00 0.00 0.00 1.31
1646 1757 9.734620 CATTCACAATGTAAAATCGATACCAAT 57.265 29.630 0.00 0.00 34.18 3.16
1649 1760 9.825109 TCACAATGTAAAATCGATACCAATAGA 57.175 29.630 0.00 0.00 0.00 1.98
1652 1763 9.546909 CAATGTAAAATCGATACCAATAGATGC 57.453 33.333 0.00 0.00 29.04 3.91
1653 1764 7.346208 TGTAAAATCGATACCAATAGATGCG 57.654 36.000 0.00 0.00 29.04 4.73
1654 1765 6.926826 TGTAAAATCGATACCAATAGATGCGT 59.073 34.615 0.00 0.00 29.04 5.24
1655 1766 6.467723 AAAATCGATACCAATAGATGCGTC 57.532 37.500 0.00 0.00 29.04 5.19
1656 1767 4.783764 ATCGATACCAATAGATGCGTCA 57.216 40.909 8.99 0.00 0.00 4.35
1657 1768 4.783764 TCGATACCAATAGATGCGTCAT 57.216 40.909 8.99 0.00 0.00 3.06
1658 1769 4.485163 TCGATACCAATAGATGCGTCATG 58.515 43.478 8.99 4.19 0.00 3.07
1659 1770 4.217550 TCGATACCAATAGATGCGTCATGA 59.782 41.667 8.99 0.00 0.00 3.07
1660 1771 4.324669 CGATACCAATAGATGCGTCATGAC 59.675 45.833 16.21 16.21 0.00 3.06
1661 1772 3.541996 ACCAATAGATGCGTCATGACA 57.458 42.857 24.93 7.57 0.00 3.58
1662 1773 4.077300 ACCAATAGATGCGTCATGACAT 57.923 40.909 24.93 12.27 0.00 3.06
1663 1774 5.213891 ACCAATAGATGCGTCATGACATA 57.786 39.130 24.93 13.40 0.00 2.29
1664 1775 5.610398 ACCAATAGATGCGTCATGACATAA 58.390 37.500 24.93 10.29 0.00 1.90
1665 1776 6.054941 ACCAATAGATGCGTCATGACATAAA 58.945 36.000 24.93 7.82 0.00 1.40
1666 1777 6.203530 ACCAATAGATGCGTCATGACATAAAG 59.796 38.462 24.93 9.73 0.00 1.85
1667 1778 6.203530 CCAATAGATGCGTCATGACATAAAGT 59.796 38.462 24.93 7.61 0.00 2.66
1668 1779 7.254898 CCAATAGATGCGTCATGACATAAAGTT 60.255 37.037 24.93 8.67 0.00 2.66
1669 1780 7.792374 ATAGATGCGTCATGACATAAAGTTT 57.208 32.000 24.93 5.65 0.00 2.66
1670 1781 6.111768 AGATGCGTCATGACATAAAGTTTC 57.888 37.500 24.93 9.73 0.00 2.78
1671 1782 5.643348 AGATGCGTCATGACATAAAGTTTCA 59.357 36.000 24.93 8.45 0.00 2.69
1672 1783 5.281693 TGCGTCATGACATAAAGTTTCAG 57.718 39.130 24.93 5.71 0.00 3.02
1673 1784 4.994217 TGCGTCATGACATAAAGTTTCAGA 59.006 37.500 24.93 0.00 0.00 3.27
1674 1785 5.107104 TGCGTCATGACATAAAGTTTCAGAC 60.107 40.000 24.93 2.58 0.00 3.51
1675 1786 5.120830 GCGTCATGACATAAAGTTTCAGACT 59.879 40.000 24.93 0.00 41.47 3.24
1676 1787 6.310467 GCGTCATGACATAAAGTTTCAGACTA 59.690 38.462 24.93 0.00 37.72 2.59
1677 1788 7.010552 GCGTCATGACATAAAGTTTCAGACTAT 59.989 37.037 24.93 0.00 37.72 2.12
1678 1789 9.516314 CGTCATGACATAAAGTTTCAGACTATA 57.484 33.333 24.93 0.00 37.72 1.31
1690 1801 8.723942 AGTTTCAGACTATAACTTTAGCATGG 57.276 34.615 0.00 0.00 36.65 3.66
1691 1802 8.322091 AGTTTCAGACTATAACTTTAGCATGGT 58.678 33.333 1.62 1.62 36.65 3.55
1692 1803 9.595823 GTTTCAGACTATAACTTTAGCATGGTA 57.404 33.333 0.00 0.00 0.00 3.25
1693 1804 9.817809 TTTCAGACTATAACTTTAGCATGGTAG 57.182 33.333 4.57 0.00 0.00 3.18
1694 1805 8.762481 TCAGACTATAACTTTAGCATGGTAGA 57.238 34.615 4.57 0.00 0.00 2.59
1695 1806 9.368416 TCAGACTATAACTTTAGCATGGTAGAT 57.632 33.333 4.57 0.00 0.00 1.98
1696 1807 9.416794 CAGACTATAACTTTAGCATGGTAGATG 57.583 37.037 4.57 2.60 0.00 2.90
1697 1808 9.148879 AGACTATAACTTTAGCATGGTAGATGT 57.851 33.333 4.57 3.19 0.00 3.06
1698 1809 9.765795 GACTATAACTTTAGCATGGTAGATGTT 57.234 33.333 17.07 17.07 0.00 2.71
1699 1810 9.547753 ACTATAACTTTAGCATGGTAGATGTTG 57.452 33.333 19.77 11.54 0.00 3.33
1700 1811 9.764363 CTATAACTTTAGCATGGTAGATGTTGA 57.236 33.333 19.77 11.95 0.00 3.18
1704 1815 9.632638 AACTTTAGCATGGTAGATGTTGATATT 57.367 29.630 4.57 0.00 0.00 1.28
1705 1816 9.632638 ACTTTAGCATGGTAGATGTTGATATTT 57.367 29.630 4.57 0.00 0.00 1.40
1733 1844 9.743057 TTCTTACAAATATGGTCAAACTTTGTG 57.257 29.630 8.72 0.00 39.58 3.33
1734 1845 9.126151 TCTTACAAATATGGTCAAACTTTGTGA 57.874 29.630 8.72 1.21 39.58 3.58
1735 1846 9.743057 CTTACAAATATGGTCAAACTTTGTGAA 57.257 29.630 8.72 1.11 39.58 3.18
1736 1847 9.743057 TTACAAATATGGTCAAACTTTGTGAAG 57.257 29.630 8.72 0.00 39.58 3.02
1762 1873 9.495754 GTTTGACTTCAGACAATTCTTATATGC 57.504 33.333 0.00 0.00 31.96 3.14
1763 1874 8.791327 TTGACTTCAGACAATTCTTATATGCA 57.209 30.769 0.00 0.00 0.00 3.96
1764 1875 8.791327 TGACTTCAGACAATTCTTATATGCAA 57.209 30.769 0.00 0.00 0.00 4.08
1765 1876 9.230122 TGACTTCAGACAATTCTTATATGCAAA 57.770 29.630 0.00 0.00 0.00 3.68
1766 1877 9.713740 GACTTCAGACAATTCTTATATGCAAAG 57.286 33.333 0.00 0.00 0.00 2.77
1767 1878 9.236006 ACTTCAGACAATTCTTATATGCAAAGT 57.764 29.630 0.00 0.00 0.00 2.66
1778 1889 7.981142 TCTTATATGCAAAGTAAAAAGGACCG 58.019 34.615 0.00 0.00 0.00 4.79
1779 1890 7.608761 TCTTATATGCAAAGTAAAAAGGACCGT 59.391 33.333 0.00 0.00 0.00 4.83
1780 1891 8.789825 TTATATGCAAAGTAAAAAGGACCGTA 57.210 30.769 0.00 0.00 0.00 4.02
1781 1892 5.622770 ATGCAAAGTAAAAAGGACCGTAG 57.377 39.130 0.00 0.00 0.00 3.51
1799 1910 3.315749 CGTAGGGAGTACTTGATCTCACC 59.684 52.174 0.00 0.00 34.97 4.02
1801 1912 3.637769 AGGGAGTACTTGATCTCACCTC 58.362 50.000 0.00 0.00 34.97 3.85
1844 1963 1.711060 CGCGGTGTGGTGACAGTTTT 61.711 55.000 0.00 0.00 44.46 2.43
1924 2044 1.801913 GCAGTATATCCTCGCGGCG 60.802 63.158 17.70 17.70 0.00 6.46
1978 2099 0.967380 CAGGATGCACCCCTTGTTCC 60.967 60.000 6.74 0.00 40.05 3.62
2032 2157 5.649782 AATAACCCTGCTTGAATTGACTG 57.350 39.130 0.00 0.00 0.00 3.51
2104 2229 8.237811 AGTACCACAAATCTGAAGTTTTGAAT 57.762 30.769 16.83 7.31 37.85 2.57
2113 2238 8.953368 AATCTGAAGTTTTGAATTTTCTTGCT 57.047 26.923 0.00 0.00 0.00 3.91
2118 2243 8.199449 TGAAGTTTTGAATTTTCTTGCTCTGAT 58.801 29.630 0.00 0.00 0.00 2.90
2185 2322 5.932303 TCTTGCTTTGGACATCTAGTGTTAC 59.068 40.000 0.00 0.00 42.36 2.50
2233 2378 2.492088 GGGCTTCTTGTAATGACCCAAC 59.508 50.000 0.00 0.00 35.84 3.77
2241 2386 6.303054 TCTTGTAATGACCCAACATTTCAGA 58.697 36.000 0.00 0.00 38.23 3.27
2243 2388 6.325919 TGTAATGACCCAACATTTCAGAAC 57.674 37.500 0.00 0.00 40.36 3.01
2244 2389 6.068010 TGTAATGACCCAACATTTCAGAACT 58.932 36.000 0.00 0.00 40.36 3.01
2332 2500 8.997621 TCATTATACGAAAGCAAAAGTAGACT 57.002 30.769 0.00 0.00 0.00 3.24
2340 2633 7.602644 ACGAAAGCAAAAGTAGACTTGATATCA 59.397 33.333 0.00 0.00 36.12 2.15
2357 2650 8.515695 TTGATATCATTGATTCCATATCTGGC 57.484 34.615 6.17 0.00 42.80 4.85
2383 2688 0.979665 ATACAGGGCCATCGATGAGG 59.020 55.000 26.86 12.22 0.00 3.86
2450 3184 9.591792 CAAGTGTCTTCTCATAGATGTTTGATA 57.408 33.333 0.00 0.00 0.00 2.15
2531 3864 3.946558 ACAACATGCCTGCAAACATTTTT 59.053 34.783 0.00 0.00 0.00 1.94
2647 4012 0.174389 CTGTATGCGGTGCTCTCAGT 59.826 55.000 0.00 0.00 0.00 3.41
2658 4023 2.097142 GTGCTCTCAGTTTCATGCCATC 59.903 50.000 0.00 0.00 0.00 3.51
2696 4061 6.694411 GCATTTGTGTGAGTCATTATCATTCC 59.306 38.462 0.00 0.00 0.00 3.01
2697 4062 7.629008 GCATTTGTGTGAGTCATTATCATTCCA 60.629 37.037 0.00 0.00 0.00 3.53
2707 4072 7.002879 AGTCATTATCATTCCAAATGGAGGAG 58.997 38.462 1.86 0.00 46.36 3.69
2793 4159 2.159240 CGGAACCGAGATTGATCTGTCA 60.159 50.000 7.53 0.00 42.83 3.58
2872 4240 8.918116 ACTTGACACTAGCTATATGATTCTGAA 58.082 33.333 11.16 0.00 0.00 3.02
2918 4286 5.754890 CCTTTGTTTGACTGGATTTTCCTTG 59.245 40.000 0.00 0.00 37.46 3.61
3236 4784 2.937994 CTCACAGCTTGAGTGTTTCG 57.062 50.000 14.26 0.00 46.12 3.46
3241 4789 2.866762 ACAGCTTGAGTGTTTCGAAGAC 59.133 45.455 0.00 0.00 34.32 3.01
3280 4917 1.400629 CGCAAGCAACCTTCAGTGATG 60.401 52.381 0.00 0.00 0.00 3.07
3307 4944 4.687948 CGATGTTGACTCAGATCTGTTGTT 59.312 41.667 21.92 7.37 0.00 2.83
3308 4945 5.178252 CGATGTTGACTCAGATCTGTTGTTT 59.822 40.000 21.92 3.60 0.00 2.83
3349 4986 7.640240 GGAACATGAGTAAAATCAGCGAAATAC 59.360 37.037 0.00 0.00 31.44 1.89
3435 5088 1.812571 GGATGTTGTTGCCTCGTTCAT 59.187 47.619 0.00 0.00 0.00 2.57
3492 5151 3.907221 AGTTTGCCAGCATATCCTCAAT 58.093 40.909 0.00 0.00 0.00 2.57
3499 5158 4.500375 GCCAGCATATCCTCAATTGTTTCC 60.500 45.833 5.13 0.00 0.00 3.13
3501 5160 5.221185 CCAGCATATCCTCAATTGTTTCCTG 60.221 44.000 5.13 3.29 0.00 3.86
3510 5169 6.260493 TCCTCAATTGTTTCCTGCAAAATTTG 59.740 34.615 5.13 0.57 0.00 2.32
3529 5188 1.990327 TGCATGGATATCCTGCATCCT 59.010 47.619 29.61 6.41 41.64 3.24
3530 5189 2.290705 TGCATGGATATCCTGCATCCTG 60.291 50.000 29.61 15.55 41.64 3.86
3532 5191 3.560668 GCATGGATATCCTGCATCCTGAA 60.561 47.826 27.52 7.26 42.21 3.02
3563 5231 1.228063 CACTGGCTTGGCTGTGTCT 60.228 57.895 20.26 0.00 32.25 3.41
3694 5362 5.163723 CCATGGTAGCAGTTATTGTCAGTTG 60.164 44.000 2.57 0.00 0.00 3.16
3699 5367 6.428771 GGTAGCAGTTATTGTCAGTTGGTTTA 59.571 38.462 0.00 0.00 0.00 2.01
3702 5370 8.268850 AGCAGTTATTGTCAGTTGGTTTATAG 57.731 34.615 0.00 0.00 0.00 1.31
3703 5371 7.336931 AGCAGTTATTGTCAGTTGGTTTATAGG 59.663 37.037 0.00 0.00 0.00 2.57
3704 5372 7.335924 GCAGTTATTGTCAGTTGGTTTATAGGA 59.664 37.037 0.00 0.00 0.00 2.94
3705 5373 8.883731 CAGTTATTGTCAGTTGGTTTATAGGAG 58.116 37.037 0.00 0.00 0.00 3.69
3706 5374 8.603304 AGTTATTGTCAGTTGGTTTATAGGAGT 58.397 33.333 0.00 0.00 0.00 3.85
3776 5445 6.040842 GGAATATACCCAGCACAACAATCATT 59.959 38.462 0.00 0.00 0.00 2.57
3789 5458 6.647481 CACAACAATCATTGACCACATGAATT 59.353 34.615 3.79 0.00 33.57 2.17
3792 5461 3.872511 TCATTGACCACATGAATTGGC 57.127 42.857 0.00 0.00 37.69 4.52
3839 5514 4.280677 TCAGCCAAACCAATCGAAGAAAAT 59.719 37.500 0.00 0.00 43.58 1.82
3840 5515 5.475220 TCAGCCAAACCAATCGAAGAAAATA 59.525 36.000 0.00 0.00 43.58 1.40
3844 5519 7.713073 AGCCAAACCAATCGAAGAAAATAAAAA 59.287 29.630 0.00 0.00 43.58 1.94
3847 5522 9.316859 CAAACCAATCGAAGAAAATAAAAATGC 57.683 29.630 0.00 0.00 43.58 3.56
3849 5524 8.831715 ACCAATCGAAGAAAATAAAAATGCTT 57.168 26.923 0.00 0.00 43.58 3.91
3866 5544 3.009723 TGCTTCATTGTACTAGCCTTGC 58.990 45.455 0.00 0.00 32.73 4.01
3891 5569 1.225704 GCTCACCTGGCCAGCTAAT 59.774 57.895 28.39 9.24 0.00 1.73
3892 5570 0.469917 GCTCACCTGGCCAGCTAATA 59.530 55.000 28.39 9.11 0.00 0.98
3893 5571 1.134098 GCTCACCTGGCCAGCTAATAA 60.134 52.381 28.39 7.69 0.00 1.40
3899 5577 3.152341 CCTGGCCAGCTAATAAATCCAG 58.848 50.000 28.39 4.74 39.32 3.86
3930 5608 4.559862 CAAGAATTGGAGTAGTCCTGGT 57.440 45.455 17.62 2.42 43.94 4.00
3931 5609 4.256920 CAAGAATTGGAGTAGTCCTGGTG 58.743 47.826 17.62 4.03 43.94 4.17
3932 5610 3.791320 AGAATTGGAGTAGTCCTGGTGA 58.209 45.455 17.62 0.00 44.30 4.02
3933 5611 4.168101 AGAATTGGAGTAGTCCTGGTGAA 58.832 43.478 17.62 3.60 44.30 3.18
3934 5612 3.983044 ATTGGAGTAGTCCTGGTGAAC 57.017 47.619 17.62 0.00 44.30 3.18
3935 5613 2.391926 TGGAGTAGTCCTGGTGAACA 57.608 50.000 17.62 0.00 44.30 3.18
3936 5614 2.248248 TGGAGTAGTCCTGGTGAACAG 58.752 52.381 17.62 0.00 44.30 3.16
3949 5627 5.751243 TGGTGAACAGAAAGTTTTAGCTC 57.249 39.130 0.00 0.00 41.51 4.09
3950 5628 5.437060 TGGTGAACAGAAAGTTTTAGCTCT 58.563 37.500 0.00 0.00 41.51 4.09
3951 5629 6.588204 TGGTGAACAGAAAGTTTTAGCTCTA 58.412 36.000 0.00 0.00 41.51 2.43
3952 5630 6.706270 TGGTGAACAGAAAGTTTTAGCTCTAG 59.294 38.462 0.00 0.00 41.51 2.43
3953 5631 6.706716 GGTGAACAGAAAGTTTTAGCTCTAGT 59.293 38.462 0.00 0.00 41.51 2.57
3954 5632 7.871463 GGTGAACAGAAAGTTTTAGCTCTAGTA 59.129 37.037 0.00 0.00 41.51 1.82
3955 5633 8.917655 GTGAACAGAAAGTTTTAGCTCTAGTAG 58.082 37.037 0.00 0.00 41.51 2.57
3956 5634 8.639761 TGAACAGAAAGTTTTAGCTCTAGTAGT 58.360 33.333 0.00 0.00 41.51 2.73
3959 5637 8.245491 ACAGAAAGTTTTAGCTCTAGTAGTAGC 58.755 37.037 11.48 11.48 39.08 3.58
3960 5638 8.244802 CAGAAAGTTTTAGCTCTAGTAGTAGCA 58.755 37.037 18.05 6.87 41.32 3.49
3961 5639 8.245491 AGAAAGTTTTAGCTCTAGTAGTAGCAC 58.755 37.037 18.05 10.63 41.32 4.40
3962 5640 6.121613 AGTTTTAGCTCTAGTAGTAGCACG 57.878 41.667 18.05 0.00 41.32 5.34
3963 5641 5.879223 AGTTTTAGCTCTAGTAGTAGCACGA 59.121 40.000 18.05 5.94 41.32 4.35
3964 5642 6.373774 AGTTTTAGCTCTAGTAGTAGCACGAA 59.626 38.462 18.05 9.88 41.32 3.85
3965 5643 6.939132 TTTAGCTCTAGTAGTAGCACGAAT 57.061 37.500 18.05 5.52 41.32 3.34
3966 5644 4.822036 AGCTCTAGTAGTAGCACGAATG 57.178 45.455 18.05 0.00 41.32 2.67
3967 5645 4.200874 AGCTCTAGTAGTAGCACGAATGT 58.799 43.478 18.05 0.56 41.32 2.71
3969 5647 4.790123 GCTCTAGTAGTAGCACGAATGTGG 60.790 50.000 13.50 0.00 46.51 4.17
3970 5648 4.520179 TCTAGTAGTAGCACGAATGTGGA 58.480 43.478 0.00 0.00 46.51 4.02
3971 5649 5.131067 TCTAGTAGTAGCACGAATGTGGAT 58.869 41.667 0.00 0.00 46.51 3.41
3972 5650 4.737855 AGTAGTAGCACGAATGTGGATT 57.262 40.909 0.00 0.00 46.51 3.01
3973 5651 5.847111 AGTAGTAGCACGAATGTGGATTA 57.153 39.130 0.00 0.00 46.51 1.75
3974 5652 6.406692 AGTAGTAGCACGAATGTGGATTAT 57.593 37.500 0.00 0.00 46.51 1.28
3975 5653 6.817184 AGTAGTAGCACGAATGTGGATTATT 58.183 36.000 0.00 0.00 46.51 1.40
3976 5654 6.924060 AGTAGTAGCACGAATGTGGATTATTC 59.076 38.462 0.00 0.00 46.51 1.75
3977 5655 5.670485 AGTAGCACGAATGTGGATTATTCA 58.330 37.500 0.00 0.00 46.51 2.57
3978 5656 5.755375 AGTAGCACGAATGTGGATTATTCAG 59.245 40.000 0.00 0.00 46.51 3.02
3979 5657 4.517285 AGCACGAATGTGGATTATTCAGT 58.483 39.130 0.00 0.00 46.51 3.41
3980 5658 4.943705 AGCACGAATGTGGATTATTCAGTT 59.056 37.500 0.00 0.00 46.51 3.16
3981 5659 6.112734 AGCACGAATGTGGATTATTCAGTTA 58.887 36.000 0.00 0.00 46.51 2.24
3982 5660 6.767902 AGCACGAATGTGGATTATTCAGTTAT 59.232 34.615 0.00 0.00 46.51 1.89
3983 5661 7.283127 AGCACGAATGTGGATTATTCAGTTATT 59.717 33.333 0.00 0.00 46.51 1.40
3984 5662 7.915397 GCACGAATGTGGATTATTCAGTTATTT 59.085 33.333 0.00 0.00 46.51 1.40
3985 5663 9.787532 CACGAATGTGGATTATTCAGTTATTTT 57.212 29.630 0.00 0.00 42.59 1.82
3999 5677 8.840833 TTCAGTTATTTTTAAAAATCTGGGGC 57.159 30.769 25.50 12.57 39.24 5.80
4000 5678 7.093992 TCAGTTATTTTTAAAAATCTGGGGCG 58.906 34.615 25.50 11.69 39.24 6.13
4001 5679 7.039644 TCAGTTATTTTTAAAAATCTGGGGCGA 60.040 33.333 25.50 13.35 39.24 5.54
4002 5680 7.062956 CAGTTATTTTTAAAAATCTGGGGCGAC 59.937 37.037 25.50 13.66 39.24 5.19
4003 5681 3.562567 TTTTAAAAATCTGGGGCGACG 57.437 42.857 0.00 0.00 0.00 5.12
4004 5682 2.188062 TTAAAAATCTGGGGCGACGT 57.812 45.000 0.00 0.00 0.00 4.34
4005 5683 1.729284 TAAAAATCTGGGGCGACGTC 58.271 50.000 5.18 5.18 0.00 4.34
4006 5684 0.250553 AAAAATCTGGGGCGACGTCA 60.251 50.000 17.16 0.00 0.00 4.35
4007 5685 0.250553 AAAATCTGGGGCGACGTCAA 60.251 50.000 17.16 0.00 0.00 3.18
4008 5686 0.250553 AAATCTGGGGCGACGTCAAA 60.251 50.000 17.16 0.00 0.00 2.69
4009 5687 0.250553 AATCTGGGGCGACGTCAAAA 60.251 50.000 17.16 0.00 0.00 2.44
4010 5688 0.673644 ATCTGGGGCGACGTCAAAAG 60.674 55.000 17.16 5.46 0.00 2.27
4011 5689 1.301401 CTGGGGCGACGTCAAAAGA 60.301 57.895 17.16 0.00 0.00 2.52
4012 5690 1.291877 CTGGGGCGACGTCAAAAGAG 61.292 60.000 17.16 1.45 0.00 2.85
4013 5691 2.677979 GGGGCGACGTCAAAAGAGC 61.678 63.158 17.16 9.32 0.00 4.09
4014 5692 1.668151 GGGCGACGTCAAAAGAGCT 60.668 57.895 17.16 0.00 0.00 4.09
4015 5693 0.389426 GGGCGACGTCAAAAGAGCTA 60.389 55.000 17.16 0.00 0.00 3.32
4016 5694 1.425412 GGCGACGTCAAAAGAGCTAA 58.575 50.000 17.16 0.00 0.00 3.09
4017 5695 1.796459 GGCGACGTCAAAAGAGCTAAA 59.204 47.619 17.16 0.00 0.00 1.85
4018 5696 2.411160 GGCGACGTCAAAAGAGCTAAAC 60.411 50.000 17.16 0.00 0.00 2.01
4019 5697 2.475487 GCGACGTCAAAAGAGCTAAACT 59.525 45.455 17.16 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
326 358 3.641925 GACGTCTCCCCTCCCTCGT 62.642 68.421 8.70 0.00 0.00 4.18
437 486 1.292541 GTCTTCTTCCCCGAACGCT 59.707 57.895 0.00 0.00 0.00 5.07
575 637 1.097547 CGATTTTCGCTGCCCTGGAT 61.098 55.000 0.00 0.00 31.14 3.41
576 638 1.745115 CGATTTTCGCTGCCCTGGA 60.745 57.895 0.00 0.00 31.14 3.86
582 644 2.405191 GAGCCCGATTTTCGCTGC 59.595 61.111 0.00 0.00 38.82 5.25
584 646 1.450312 CAGGAGCCCGATTTTCGCT 60.450 57.895 0.00 0.00 38.82 4.93
606 669 1.735571 GAAAAATCGGCCTAGTCGCAA 59.264 47.619 0.00 0.00 0.00 4.85
607 670 1.338294 TGAAAAATCGGCCTAGTCGCA 60.338 47.619 0.00 0.00 0.00 5.10
614 677 0.515564 CGACGTTGAAAAATCGGCCT 59.484 50.000 0.00 0.00 34.20 5.19
646 709 0.998145 AGAAAGGCCTCTCCAAGCAT 59.002 50.000 5.23 0.00 37.29 3.79
650 713 0.475632 TCCCAGAAAGGCCTCTCCAA 60.476 55.000 5.23 0.00 37.29 3.53
672 736 0.694771 ACTCAAAGCATCTCCAGCCA 59.305 50.000 0.00 0.00 0.00 4.75
686 750 1.816074 GGCCCAATGTACGAACTCAA 58.184 50.000 0.00 0.00 0.00 3.02
692 756 1.404479 ATAGCCGGCCCAATGTACGA 61.404 55.000 26.15 0.00 0.00 3.43
695 759 0.396435 CTCATAGCCGGCCCAATGTA 59.604 55.000 26.15 8.26 0.00 2.29
696 760 1.149174 CTCATAGCCGGCCCAATGT 59.851 57.895 26.15 5.68 0.00 2.71
697 761 1.601759 CCTCATAGCCGGCCCAATG 60.602 63.158 26.15 23.52 0.00 2.82
698 762 2.833913 CCCTCATAGCCGGCCCAAT 61.834 63.158 26.15 12.16 0.00 3.16
699 763 3.488569 CCCTCATAGCCGGCCCAA 61.489 66.667 26.15 9.94 0.00 4.12
700 764 4.815973 ACCCTCATAGCCGGCCCA 62.816 66.667 26.15 12.66 0.00 5.36
701 765 3.942439 GACCCTCATAGCCGGCCC 61.942 72.222 26.15 0.00 0.00 5.80
702 766 4.301027 CGACCCTCATAGCCGGCC 62.301 72.222 26.15 5.07 0.00 6.13
703 767 3.224324 TCGACCCTCATAGCCGGC 61.224 66.667 21.89 21.89 0.00 6.13
704 768 1.392710 AAGTCGACCCTCATAGCCGG 61.393 60.000 13.01 0.00 0.00 6.13
705 769 0.249073 CAAGTCGACCCTCATAGCCG 60.249 60.000 13.01 0.00 0.00 5.52
706 770 1.067821 CTCAAGTCGACCCTCATAGCC 59.932 57.143 13.01 0.00 0.00 3.93
707 771 1.751924 ACTCAAGTCGACCCTCATAGC 59.248 52.381 13.01 0.00 0.00 2.97
708 772 2.099921 CCACTCAAGTCGACCCTCATAG 59.900 54.545 13.01 4.30 0.00 2.23
709 773 2.100197 CCACTCAAGTCGACCCTCATA 58.900 52.381 13.01 0.00 0.00 2.15
710 774 0.898320 CCACTCAAGTCGACCCTCAT 59.102 55.000 13.01 0.00 0.00 2.90
711 775 0.469331 ACCACTCAAGTCGACCCTCA 60.469 55.000 13.01 0.00 0.00 3.86
712 776 0.680061 AACCACTCAAGTCGACCCTC 59.320 55.000 13.01 0.00 0.00 4.30
713 777 1.129058 AAACCACTCAAGTCGACCCT 58.871 50.000 13.01 0.00 0.00 4.34
714 778 1.871676 GAAAACCACTCAAGTCGACCC 59.128 52.381 13.01 0.00 0.00 4.46
715 779 1.525619 CGAAAACCACTCAAGTCGACC 59.474 52.381 13.01 0.00 0.00 4.79
716 780 1.525619 CCGAAAACCACTCAAGTCGAC 59.474 52.381 7.70 7.70 0.00 4.20
717 781 1.539496 CCCGAAAACCACTCAAGTCGA 60.539 52.381 0.00 0.00 0.00 4.20
718 782 0.865769 CCCGAAAACCACTCAAGTCG 59.134 55.000 0.00 0.00 0.00 4.18
719 783 0.591659 GCCCGAAAACCACTCAAGTC 59.408 55.000 0.00 0.00 0.00 3.01
720 784 0.106918 TGCCCGAAAACCACTCAAGT 60.107 50.000 0.00 0.00 0.00 3.16
721 785 0.593128 CTGCCCGAAAACCACTCAAG 59.407 55.000 0.00 0.00 0.00 3.02
722 786 1.452145 GCTGCCCGAAAACCACTCAA 61.452 55.000 0.00 0.00 0.00 3.02
723 787 1.896660 GCTGCCCGAAAACCACTCA 60.897 57.895 0.00 0.00 0.00 3.41
724 788 2.626780 GGCTGCCCGAAAACCACTC 61.627 63.158 7.66 0.00 0.00 3.51
725 789 2.597510 GGCTGCCCGAAAACCACT 60.598 61.111 7.66 0.00 0.00 4.00
726 790 2.909965 TGGCTGCCCGAAAACCAC 60.910 61.111 17.53 0.00 0.00 4.16
727 791 2.597217 CTGGCTGCCCGAAAACCA 60.597 61.111 17.53 0.00 0.00 3.67
728 792 2.597510 ACTGGCTGCCCGAAAACC 60.598 61.111 17.53 0.00 0.00 3.27
729 793 2.954611 GACTGGCTGCCCGAAAAC 59.045 61.111 17.53 1.42 0.00 2.43
730 794 2.668212 CGACTGGCTGCCCGAAAA 60.668 61.111 17.53 0.00 0.00 2.29
731 795 3.936203 ACGACTGGCTGCCCGAAA 61.936 61.111 20.06 0.00 0.00 3.46
732 796 4.680237 CACGACTGGCTGCCCGAA 62.680 66.667 20.06 0.00 0.00 4.30
736 800 4.664677 ACGTCACGACTGGCTGCC 62.665 66.667 12.87 12.87 0.00 4.85
737 801 3.106407 GACGTCACGACTGGCTGC 61.106 66.667 11.55 0.00 0.00 5.25
738 802 1.730902 CAGACGTCACGACTGGCTG 60.731 63.158 20.14 11.12 43.34 4.85
739 803 2.645567 CAGACGTCACGACTGGCT 59.354 61.111 20.14 3.44 43.34 4.75
742 806 2.801162 CGCCAGACGTCACGACTG 60.801 66.667 20.81 20.81 45.64 3.51
743 807 4.039357 CCGCCAGACGTCACGACT 62.039 66.667 19.50 0.00 41.42 4.18
744 808 1.985447 TATCCGCCAGACGTCACGAC 61.985 60.000 19.50 0.00 41.42 4.34
745 809 1.746239 TATCCGCCAGACGTCACGA 60.746 57.895 19.50 5.47 41.42 4.35
746 810 1.585521 GTATCCGCCAGACGTCACG 60.586 63.158 19.50 17.38 41.42 4.35
747 811 0.525668 CTGTATCCGCCAGACGTCAC 60.526 60.000 19.50 4.85 41.42 3.67
748 812 1.663379 CCTGTATCCGCCAGACGTCA 61.663 60.000 19.50 0.00 41.42 4.35
749 813 1.065928 CCTGTATCCGCCAGACGTC 59.934 63.158 7.70 7.70 41.42 4.34
750 814 2.423898 CCCTGTATCCGCCAGACGT 61.424 63.158 0.00 0.00 41.42 4.34
751 815 2.351336 GACCCTGTATCCGCCAGACG 62.351 65.000 0.00 0.00 43.15 4.18
752 816 1.442148 GACCCTGTATCCGCCAGAC 59.558 63.158 0.00 0.00 31.38 3.51
753 817 1.760875 GGACCCTGTATCCGCCAGA 60.761 63.158 0.00 0.00 31.38 3.86
754 818 2.032860 CTGGACCCTGTATCCGCCAG 62.033 65.000 0.00 0.00 39.30 4.85
755 819 2.039787 TGGACCCTGTATCCGCCA 59.960 61.111 0.00 0.00 39.30 5.69
756 820 1.122019 ATCTGGACCCTGTATCCGCC 61.122 60.000 0.00 0.00 39.30 6.13
757 821 0.034059 CATCTGGACCCTGTATCCGC 59.966 60.000 0.00 0.00 39.30 5.54
758 822 0.034059 GCATCTGGACCCTGTATCCG 59.966 60.000 0.00 0.00 39.30 4.18
759 823 1.346068 GAGCATCTGGACCCTGTATCC 59.654 57.143 0.00 0.00 36.70 2.59
760 824 2.829741 GAGCATCTGGACCCTGTATC 57.170 55.000 0.00 0.00 0.00 2.24
782 846 5.067273 TGTCCTATTTGGTTTGAACGATGT 58.933 37.500 0.00 0.00 37.07 3.06
809 873 1.970640 GGATGGGTTGAGCCTGTTTTT 59.029 47.619 0.48 0.00 37.43 1.94
826 890 1.270147 GCTATAGGTCGCAAACGGGAT 60.270 52.381 1.04 0.00 40.63 3.85
841 905 2.549198 CGCACGGACGGGAGCTATA 61.549 63.158 0.00 0.00 0.00 1.31
842 906 3.900892 CGCACGGACGGGAGCTAT 61.901 66.667 0.00 0.00 0.00 2.97
941 1039 0.752376 TTTTTCTTGTTCGGCGGGGT 60.752 50.000 7.21 0.00 0.00 4.95
952 1050 4.214332 CGTCTCTTCTTCCCCTTTTTCTTG 59.786 45.833 0.00 0.00 0.00 3.02
1031 1130 3.587170 AAGAGGGCGAGGGAGACGT 62.587 63.158 0.00 0.00 0.00 4.34
1103 1202 4.052229 CGAGGTCACGGAAGCGGT 62.052 66.667 0.00 0.00 0.00 5.68
1105 1204 2.805353 CACGAGGTCACGGAAGCG 60.805 66.667 0.00 0.00 37.61 4.68
1121 1220 0.605083 CTGTCCAGCAGTACAGCTCA 59.395 55.000 10.18 4.97 44.54 4.26
1154 1257 4.022849 TCGAGCATCATCAGTAATCGTGAT 60.023 41.667 0.00 0.00 34.88 3.06
1271 1376 6.894682 TGGTGTGATTTAGCATATACAGGAA 58.105 36.000 0.00 0.00 0.00 3.36
1314 1424 2.791158 CGCATCGACTTAACCAATTGGC 60.791 50.000 24.79 5.93 39.32 4.52
1321 1431 2.535984 CTGACATCGCATCGACTTAACC 59.464 50.000 0.00 0.00 39.18 2.85
1335 1445 2.509336 CGTCCGGCACCTGACATC 60.509 66.667 11.19 0.00 31.81 3.06
1534 1645 1.269569 GCAAACCAAAAAGGACCGGAG 60.270 52.381 9.46 0.00 41.22 4.63
1535 1646 0.747852 GCAAACCAAAAAGGACCGGA 59.252 50.000 9.46 0.00 41.22 5.14
1536 1647 0.461961 TGCAAACCAAAAAGGACCGG 59.538 50.000 0.00 0.00 41.22 5.28
1546 1657 9.770097 TTCAGACAAATTTTATATGCAAACCAA 57.230 25.926 0.00 0.00 0.00 3.67
1547 1658 9.421806 CTTCAGACAAATTTTATATGCAAACCA 57.578 29.630 0.00 0.00 0.00 3.67
1548 1659 9.423061 ACTTCAGACAAATTTTATATGCAAACC 57.577 29.630 0.00 0.00 0.00 3.27
1552 1663 9.844790 CTTGACTTCAGACAAATTTTATATGCA 57.155 29.630 0.00 0.00 30.22 3.96
1553 1664 8.801913 GCTTGACTTCAGACAAATTTTATATGC 58.198 33.333 0.00 0.00 30.22 3.14
1554 1665 9.294030 GGCTTGACTTCAGACAAATTTTATATG 57.706 33.333 0.00 0.00 30.22 1.78
1555 1666 9.247861 AGGCTTGACTTCAGACAAATTTTATAT 57.752 29.630 0.00 0.00 30.22 0.86
1556 1667 8.635765 AGGCTTGACTTCAGACAAATTTTATA 57.364 30.769 0.00 0.00 30.22 0.98
1557 1668 7.530426 AGGCTTGACTTCAGACAAATTTTAT 57.470 32.000 0.00 0.00 30.22 1.40
1558 1669 6.293407 CGAGGCTTGACTTCAGACAAATTTTA 60.293 38.462 0.00 0.00 30.22 1.52
1559 1670 5.506317 CGAGGCTTGACTTCAGACAAATTTT 60.506 40.000 0.00 0.00 30.22 1.82
1560 1671 4.023707 CGAGGCTTGACTTCAGACAAATTT 60.024 41.667 0.00 0.00 30.22 1.82
1561 1672 3.499918 CGAGGCTTGACTTCAGACAAATT 59.500 43.478 0.00 0.00 30.22 1.82
1562 1673 3.070018 CGAGGCTTGACTTCAGACAAAT 58.930 45.455 0.00 0.00 30.22 2.32
1563 1674 2.158957 ACGAGGCTTGACTTCAGACAAA 60.159 45.455 9.20 0.00 30.22 2.83
1564 1675 1.412710 ACGAGGCTTGACTTCAGACAA 59.587 47.619 9.20 0.00 0.00 3.18
1565 1676 1.040646 ACGAGGCTTGACTTCAGACA 58.959 50.000 9.20 0.00 0.00 3.41
1566 1677 3.299340 TTACGAGGCTTGACTTCAGAC 57.701 47.619 9.20 0.00 0.00 3.51
1567 1678 4.330944 TTTTACGAGGCTTGACTTCAGA 57.669 40.909 9.20 0.00 0.00 3.27
1568 1679 5.613358 AATTTTACGAGGCTTGACTTCAG 57.387 39.130 9.20 0.00 0.00 3.02
1569 1680 5.529430 TCAAATTTTACGAGGCTTGACTTCA 59.471 36.000 9.20 0.00 0.00 3.02
1570 1681 5.851703 GTCAAATTTTACGAGGCTTGACTTC 59.148 40.000 9.20 0.00 39.54 3.01
1571 1682 5.278315 GGTCAAATTTTACGAGGCTTGACTT 60.278 40.000 9.20 0.00 41.40 3.01
1572 1683 4.215613 GGTCAAATTTTACGAGGCTTGACT 59.784 41.667 9.20 0.00 41.40 3.41
1573 1684 4.023536 TGGTCAAATTTTACGAGGCTTGAC 60.024 41.667 9.20 5.19 41.09 3.18
1574 1685 4.138290 TGGTCAAATTTTACGAGGCTTGA 58.862 39.130 9.20 0.00 0.00 3.02
1575 1686 4.497473 TGGTCAAATTTTACGAGGCTTG 57.503 40.909 0.00 0.00 0.00 4.01
1576 1687 4.583073 AGTTGGTCAAATTTTACGAGGCTT 59.417 37.500 0.00 0.00 0.00 4.35
1577 1688 4.142038 AGTTGGTCAAATTTTACGAGGCT 58.858 39.130 0.00 0.00 0.00 4.58
1578 1689 4.499037 AGTTGGTCAAATTTTACGAGGC 57.501 40.909 0.00 0.00 0.00 4.70
1579 1690 9.769093 CTATAAAGTTGGTCAAATTTTACGAGG 57.231 33.333 13.08 0.00 39.07 4.63
1620 1731 9.734620 ATTGGTATCGATTTTACATTGTGAATG 57.265 29.630 1.71 0.00 44.48 2.67
1623 1734 9.825109 TCTATTGGTATCGATTTTACATTGTGA 57.175 29.630 1.71 0.00 0.00 3.58
1626 1737 9.546909 GCATCTATTGGTATCGATTTTACATTG 57.453 33.333 1.71 0.00 0.00 2.82
1627 1738 8.443160 CGCATCTATTGGTATCGATTTTACATT 58.557 33.333 1.71 0.00 0.00 2.71
1628 1739 7.602644 ACGCATCTATTGGTATCGATTTTACAT 59.397 33.333 1.71 0.00 0.00 2.29
1629 1740 6.926826 ACGCATCTATTGGTATCGATTTTACA 59.073 34.615 1.71 0.00 0.00 2.41
1630 1741 7.115805 TGACGCATCTATTGGTATCGATTTTAC 59.884 37.037 1.71 0.00 0.00 2.01
1631 1742 7.149307 TGACGCATCTATTGGTATCGATTTTA 58.851 34.615 1.71 0.00 0.00 1.52
1632 1743 5.989168 TGACGCATCTATTGGTATCGATTTT 59.011 36.000 1.71 0.00 0.00 1.82
1633 1744 5.538118 TGACGCATCTATTGGTATCGATTT 58.462 37.500 1.71 0.00 0.00 2.17
1634 1745 5.134202 TGACGCATCTATTGGTATCGATT 57.866 39.130 1.71 0.00 0.00 3.34
1635 1746 4.783764 TGACGCATCTATTGGTATCGAT 57.216 40.909 2.16 2.16 0.00 3.59
1636 1747 4.217550 TCATGACGCATCTATTGGTATCGA 59.782 41.667 0.00 0.00 0.00 3.59
1637 1748 4.324669 GTCATGACGCATCTATTGGTATCG 59.675 45.833 10.69 0.00 0.00 2.92
1638 1749 5.230182 TGTCATGACGCATCTATTGGTATC 58.770 41.667 20.54 0.00 0.00 2.24
1639 1750 5.213891 TGTCATGACGCATCTATTGGTAT 57.786 39.130 20.54 0.00 0.00 2.73
1640 1751 4.664150 TGTCATGACGCATCTATTGGTA 57.336 40.909 20.54 0.00 0.00 3.25
1641 1752 3.541996 TGTCATGACGCATCTATTGGT 57.458 42.857 20.54 0.00 0.00 3.67
1642 1753 6.203530 ACTTTATGTCATGACGCATCTATTGG 59.796 38.462 20.54 5.99 0.00 3.16
1643 1754 7.182361 ACTTTATGTCATGACGCATCTATTG 57.818 36.000 20.54 7.24 0.00 1.90
1644 1755 7.792374 AACTTTATGTCATGACGCATCTATT 57.208 32.000 20.54 7.16 0.00 1.73
1645 1756 7.495606 TGAAACTTTATGTCATGACGCATCTAT 59.504 33.333 20.54 9.94 0.00 1.98
1646 1757 6.816140 TGAAACTTTATGTCATGACGCATCTA 59.184 34.615 20.54 2.48 0.00 1.98
1647 1758 5.643348 TGAAACTTTATGTCATGACGCATCT 59.357 36.000 20.54 5.77 0.00 2.90
1648 1759 5.868257 TGAAACTTTATGTCATGACGCATC 58.132 37.500 20.54 10.29 0.00 3.91
1649 1760 5.643348 TCTGAAACTTTATGTCATGACGCAT 59.357 36.000 20.54 12.07 0.00 4.73
1650 1761 4.994217 TCTGAAACTTTATGTCATGACGCA 59.006 37.500 20.54 8.17 0.00 5.24
1651 1762 5.120830 AGTCTGAAACTTTATGTCATGACGC 59.879 40.000 20.54 0.00 33.03 5.19
1652 1763 6.712241 AGTCTGAAACTTTATGTCATGACG 57.288 37.500 20.54 8.60 33.03 4.35
1664 1775 9.167311 CCATGCTAAAGTTATAGTCTGAAACTT 57.833 33.333 8.02 8.02 43.43 2.66
1665 1776 8.322091 ACCATGCTAAAGTTATAGTCTGAAACT 58.678 33.333 0.00 0.00 42.33 2.66
1666 1777 8.494016 ACCATGCTAAAGTTATAGTCTGAAAC 57.506 34.615 0.00 0.00 0.00 2.78
1667 1778 9.817809 CTACCATGCTAAAGTTATAGTCTGAAA 57.182 33.333 0.00 0.00 0.00 2.69
1668 1779 9.197306 TCTACCATGCTAAAGTTATAGTCTGAA 57.803 33.333 0.00 0.00 0.00 3.02
1669 1780 8.762481 TCTACCATGCTAAAGTTATAGTCTGA 57.238 34.615 0.00 0.00 0.00 3.27
1670 1781 9.416794 CATCTACCATGCTAAAGTTATAGTCTG 57.583 37.037 0.00 0.00 0.00 3.51
1671 1782 9.148879 ACATCTACCATGCTAAAGTTATAGTCT 57.851 33.333 0.00 0.00 0.00 3.24
1672 1783 9.765795 AACATCTACCATGCTAAAGTTATAGTC 57.234 33.333 0.00 0.00 0.00 2.59
1673 1784 9.547753 CAACATCTACCATGCTAAAGTTATAGT 57.452 33.333 0.00 0.00 0.00 2.12
1674 1785 9.764363 TCAACATCTACCATGCTAAAGTTATAG 57.236 33.333 0.00 0.00 0.00 1.31
1678 1789 9.632638 AATATCAACATCTACCATGCTAAAGTT 57.367 29.630 0.00 0.00 0.00 2.66
1679 1790 9.632638 AAATATCAACATCTACCATGCTAAAGT 57.367 29.630 0.00 0.00 0.00 2.66
1707 1818 9.743057 CACAAAGTTTGACCATATTTGTAAGAA 57.257 29.630 22.23 0.00 40.95 2.52
1708 1819 9.126151 TCACAAAGTTTGACCATATTTGTAAGA 57.874 29.630 22.23 0.00 40.95 2.10
1709 1820 9.743057 TTCACAAAGTTTGACCATATTTGTAAG 57.257 29.630 22.23 0.00 40.95 2.34
1710 1821 9.743057 CTTCACAAAGTTTGACCATATTTGTAA 57.257 29.630 22.23 3.87 40.95 2.41
1711 1822 8.908903 ACTTCACAAAGTTTGACCATATTTGTA 58.091 29.630 22.23 0.92 43.28 2.41
1712 1823 7.781056 ACTTCACAAAGTTTGACCATATTTGT 58.219 30.769 22.23 5.50 43.28 2.83
1736 1847 9.495754 GCATATAAGAATTGTCTGAAGTCAAAC 57.504 33.333 0.00 0.00 33.05 2.93
1737 1848 9.230122 TGCATATAAGAATTGTCTGAAGTCAAA 57.770 29.630 0.00 0.00 33.05 2.69
1738 1849 8.791327 TGCATATAAGAATTGTCTGAAGTCAA 57.209 30.769 0.00 0.00 33.05 3.18
1739 1850 8.791327 TTGCATATAAGAATTGTCTGAAGTCA 57.209 30.769 0.00 0.00 33.05 3.41
1740 1851 9.713740 CTTTGCATATAAGAATTGTCTGAAGTC 57.286 33.333 0.00 0.00 33.05 3.01
1741 1852 9.236006 ACTTTGCATATAAGAATTGTCTGAAGT 57.764 29.630 3.66 0.00 33.05 3.01
1752 1863 8.455682 CGGTCCTTTTTACTTTGCATATAAGAA 58.544 33.333 3.66 0.00 0.00 2.52
1753 1864 7.608761 ACGGTCCTTTTTACTTTGCATATAAGA 59.391 33.333 3.66 0.00 0.00 2.10
1754 1865 7.758495 ACGGTCCTTTTTACTTTGCATATAAG 58.242 34.615 0.00 0.00 0.00 1.73
1755 1866 7.690952 ACGGTCCTTTTTACTTTGCATATAA 57.309 32.000 0.00 0.00 0.00 0.98
1756 1867 7.496591 CCTACGGTCCTTTTTACTTTGCATATA 59.503 37.037 0.00 0.00 0.00 0.86
1757 1868 6.317893 CCTACGGTCCTTTTTACTTTGCATAT 59.682 38.462 0.00 0.00 0.00 1.78
1758 1869 5.644636 CCTACGGTCCTTTTTACTTTGCATA 59.355 40.000 0.00 0.00 0.00 3.14
1759 1870 4.457949 CCTACGGTCCTTTTTACTTTGCAT 59.542 41.667 0.00 0.00 0.00 3.96
1760 1871 3.816523 CCTACGGTCCTTTTTACTTTGCA 59.183 43.478 0.00 0.00 0.00 4.08
1761 1872 3.189910 CCCTACGGTCCTTTTTACTTTGC 59.810 47.826 0.00 0.00 0.00 3.68
1762 1873 4.644498 TCCCTACGGTCCTTTTTACTTTG 58.356 43.478 0.00 0.00 0.00 2.77
1763 1874 4.349048 ACTCCCTACGGTCCTTTTTACTTT 59.651 41.667 0.00 0.00 0.00 2.66
1764 1875 3.906218 ACTCCCTACGGTCCTTTTTACTT 59.094 43.478 0.00 0.00 0.00 2.24
1765 1876 3.514539 ACTCCCTACGGTCCTTTTTACT 58.485 45.455 0.00 0.00 0.00 2.24
1766 1877 3.969287 ACTCCCTACGGTCCTTTTTAC 57.031 47.619 0.00 0.00 0.00 2.01
1767 1878 4.677182 AGTACTCCCTACGGTCCTTTTTA 58.323 43.478 0.00 0.00 0.00 1.52
1768 1879 3.514539 AGTACTCCCTACGGTCCTTTTT 58.485 45.455 0.00 0.00 0.00 1.94
1769 1880 3.181393 AGTACTCCCTACGGTCCTTTT 57.819 47.619 0.00 0.00 0.00 2.27
1770 1881 2.830321 CAAGTACTCCCTACGGTCCTTT 59.170 50.000 0.00 0.00 0.00 3.11
1771 1882 2.042162 TCAAGTACTCCCTACGGTCCTT 59.958 50.000 0.00 0.00 0.00 3.36
1772 1883 1.637553 TCAAGTACTCCCTACGGTCCT 59.362 52.381 0.00 0.00 0.00 3.85
1773 1884 2.134789 TCAAGTACTCCCTACGGTCC 57.865 55.000 0.00 0.00 0.00 4.46
1774 1885 3.553904 AGATCAAGTACTCCCTACGGTC 58.446 50.000 0.00 0.00 0.00 4.79
1775 1886 3.053842 TGAGATCAAGTACTCCCTACGGT 60.054 47.826 0.00 0.00 32.84 4.83
1776 1887 3.315749 GTGAGATCAAGTACTCCCTACGG 59.684 52.174 0.00 0.00 32.84 4.02
1777 1888 3.315749 GGTGAGATCAAGTACTCCCTACG 59.684 52.174 0.00 0.00 32.84 3.51
1778 1889 4.538738 AGGTGAGATCAAGTACTCCCTAC 58.461 47.826 0.00 0.00 34.54 3.18
1779 1890 4.229812 TGAGGTGAGATCAAGTACTCCCTA 59.770 45.833 0.00 0.00 35.55 3.53
1780 1891 3.011821 TGAGGTGAGATCAAGTACTCCCT 59.988 47.826 0.00 0.00 36.92 4.20
1781 1892 3.131400 GTGAGGTGAGATCAAGTACTCCC 59.869 52.174 0.00 0.00 32.84 4.30
1782 1893 3.764434 TGTGAGGTGAGATCAAGTACTCC 59.236 47.826 0.00 0.00 32.84 3.85
1783 1894 5.126222 TCATGTGAGGTGAGATCAAGTACTC 59.874 44.000 0.00 0.00 0.00 2.59
1784 1895 5.019470 TCATGTGAGGTGAGATCAAGTACT 58.981 41.667 0.00 0.00 0.00 2.73
1796 1907 2.047002 TGCCATCATCATGTGAGGTG 57.953 50.000 8.43 0.42 40.92 4.00
1799 1910 4.499188 GGAACAATGCCATCATCATGTGAG 60.499 45.833 0.00 0.00 40.92 3.51
1801 1912 3.131400 TGGAACAATGCCATCATCATGTG 59.869 43.478 0.00 0.00 31.92 3.21
1844 1963 9.179909 TGTTATCTAAGAAACACAAAACCAAGA 57.820 29.630 0.00 0.00 30.88 3.02
1897 2017 3.493272 GAGGATATACTGCGTGTCATCG 58.507 50.000 0.00 0.00 0.00 3.84
1924 2044 1.739466 TCATCTGAAGCATCAAACCGC 59.261 47.619 0.00 0.00 34.49 5.68
1956 2076 1.751927 CAAGGGGTGCATCCTGAGC 60.752 63.158 17.44 0.00 34.34 4.26
1957 2077 0.038744 AACAAGGGGTGCATCCTGAG 59.961 55.000 17.44 8.24 34.34 3.35
1998 2123 3.761752 GCAGGGTTATTAGCAAGAAACCA 59.238 43.478 11.27 0.00 41.91 3.67
2032 2157 1.996191 GACAGGTTCAGCGAGATTCAC 59.004 52.381 0.00 0.00 0.00 3.18
2104 2229 5.239306 CACTACAACCATCAGAGCAAGAAAA 59.761 40.000 0.00 0.00 0.00 2.29
2113 2238 9.616156 TTTAGTTTTTACACTACAACCATCAGA 57.384 29.630 0.00 0.00 0.00 3.27
2185 2322 7.453393 TGATTCAAGGCCCATAATTAGAGTAG 58.547 38.462 0.00 0.00 0.00 2.57
2213 2352 3.153919 TGTTGGGTCATTACAAGAAGCC 58.846 45.455 0.00 0.00 0.00 4.35
2229 2374 4.452455 ACGCTTAGAGTTCTGAAATGTTGG 59.548 41.667 0.00 0.00 0.00 3.77
2233 2378 8.230486 ACATAAAACGCTTAGAGTTCTGAAATG 58.770 33.333 1.23 5.01 0.00 2.32
2241 2386 5.756347 TGACACACATAAAACGCTTAGAGTT 59.244 36.000 0.00 0.00 0.00 3.01
2243 2388 5.176774 TGTGACACACATAAAACGCTTAGAG 59.823 40.000 3.56 0.00 39.62 2.43
2244 2389 5.051153 TGTGACACACATAAAACGCTTAGA 58.949 37.500 3.56 0.00 39.62 2.10
2307 2466 8.997621 AGTCTACTTTTGCTTTCGTATAATGA 57.002 30.769 0.00 0.00 0.00 2.57
2332 2500 8.333984 AGCCAGATATGGAATCAATGATATCAA 58.666 33.333 11.49 0.00 32.43 2.57
2365 2659 0.398522 ACCTCATCGATGGCCCTGTA 60.399 55.000 24.61 3.08 0.00 2.74
2367 2661 0.034059 GTACCTCATCGATGGCCCTG 59.966 60.000 24.61 11.30 0.00 4.45
2368 2662 0.105453 AGTACCTCATCGATGGCCCT 60.105 55.000 24.61 10.99 0.00 5.19
2531 3864 1.704628 TGAGCCCCATCAGTTCTTCAA 59.295 47.619 0.00 0.00 0.00 2.69
2635 3968 0.445436 GCATGAAACTGAGAGCACCG 59.555 55.000 0.00 0.00 0.00 4.94
2647 4012 7.889600 TGCATAAGGAATATAGATGGCATGAAA 59.110 33.333 3.81 0.00 0.00 2.69
2658 4023 9.060347 ACTCACACAAATGCATAAGGAATATAG 57.940 33.333 0.00 0.00 0.00 1.31
2696 4061 2.099141 TGCTCGAACTCCTCCATTTG 57.901 50.000 0.00 0.00 0.00 2.32
2697 4062 2.427506 GTTGCTCGAACTCCTCCATTT 58.572 47.619 0.00 0.00 0.00 2.32
2707 4072 1.873591 ACACTCAATGGTTGCTCGAAC 59.126 47.619 0.00 0.00 0.00 3.95
2793 4159 3.307339 GGTCTGCTCTTGTCTCCAATTCT 60.307 47.826 0.00 0.00 0.00 2.40
2899 4267 5.289595 GGAACAAGGAAAATCCAGTCAAAC 58.710 41.667 0.00 0.00 39.61 2.93
2900 4268 4.343814 GGGAACAAGGAAAATCCAGTCAAA 59.656 41.667 0.00 0.00 39.61 2.69
2918 4286 2.289565 GTATTGCTGCCAGTAGGGAAC 58.710 52.381 0.00 0.00 40.01 3.62
2959 4327 4.626042 CCTCTGGCAGTGTAGATATTGAC 58.374 47.826 15.27 0.00 0.00 3.18
3004 4372 3.522731 CCTCAGAGGGCGTCTCGG 61.523 72.222 8.88 7.16 46.82 4.63
3102 4471 1.746615 CCACGAGCTTGACCATGGG 60.747 63.158 18.09 0.00 0.00 4.00
3197 4743 6.102663 GTGAGCCTGTGACCATACATATATC 58.897 44.000 0.00 0.00 0.00 1.63
3241 4789 6.251376 GCTTGCGTTAAATCTTAATGAAGTGG 59.749 38.462 3.15 0.00 34.03 4.00
3260 4808 0.877071 ATCACTGAAGGTTGCTTGCG 59.123 50.000 0.00 0.00 0.00 4.85
3280 4917 3.061831 CAGATCTGAGTCAACATCGCAAC 59.938 47.826 18.34 0.00 0.00 4.17
3307 4944 1.002251 GTTCCGCAATGTCACCGAAAA 60.002 47.619 0.00 0.00 0.00 2.29
3308 4945 0.589223 GTTCCGCAATGTCACCGAAA 59.411 50.000 0.00 0.00 0.00 3.46
3399 5036 3.995636 ACATCCCAGTAGTACCACATCT 58.004 45.455 0.00 0.00 0.00 2.90
3435 5088 2.481289 TTGGACAGAACACACACACA 57.519 45.000 0.00 0.00 0.00 3.72
3501 5160 7.460287 ATGCAGGATATCCATGCAAATTTTGC 61.460 38.462 33.36 25.10 45.80 3.68
3510 5169 2.026542 TCAGGATGCAGGATATCCATGC 60.027 50.000 26.54 26.54 45.28 4.06
3529 5188 2.564504 CCAGTGAGTGACCAGATCTTCA 59.435 50.000 0.00 0.00 0.00 3.02
3530 5189 2.676463 GCCAGTGAGTGACCAGATCTTC 60.676 54.545 0.00 0.00 0.00 2.87
3532 5191 0.901124 GCCAGTGAGTGACCAGATCT 59.099 55.000 0.00 0.00 0.00 2.75
3563 5231 2.566833 AGCAACAGCCAAGTGATACA 57.433 45.000 0.00 0.00 0.00 2.29
3776 5445 4.412796 TTTTTGCCAATTCATGTGGTCA 57.587 36.364 3.05 0.00 38.50 4.02
3789 5458 4.654915 TCAGATCTGAGTCATTTTTGCCA 58.345 39.130 21.67 0.00 34.14 4.92
3839 5514 7.938140 AGGCTAGTACAATGAAGCATTTTTA 57.062 32.000 0.00 0.00 36.68 1.52
3840 5515 6.840780 AGGCTAGTACAATGAAGCATTTTT 57.159 33.333 0.00 0.00 36.68 1.94
3844 5519 3.629398 GCAAGGCTAGTACAATGAAGCAT 59.371 43.478 0.00 0.00 36.68 3.79
3847 5522 4.937620 TCTTGCAAGGCTAGTACAATGAAG 59.062 41.667 25.73 0.00 33.51 3.02
3849 5524 4.507710 CTCTTGCAAGGCTAGTACAATGA 58.492 43.478 25.73 1.41 33.51 2.57
3866 5544 2.045536 GCCAGGTGAGCCCTCTTG 60.046 66.667 0.00 0.00 43.86 3.02
3882 5560 7.095695 TGTAAAACTGGATTTATTAGCTGGC 57.904 36.000 0.00 0.00 0.00 4.85
3892 5570 9.927668 CCAATTCTTGTATGTAAAACTGGATTT 57.072 29.630 0.00 0.00 0.00 2.17
3893 5571 9.308000 TCCAATTCTTGTATGTAAAACTGGATT 57.692 29.630 0.00 0.00 0.00 3.01
3914 5592 3.248024 TGTTCACCAGGACTACTCCAAT 58.752 45.455 0.00 0.00 39.39 3.16
3920 5598 4.338379 ACTTTCTGTTCACCAGGACTAC 57.662 45.455 0.00 0.00 41.83 2.73
3921 5599 5.367945 AAACTTTCTGTTCACCAGGACTA 57.632 39.130 0.00 0.00 41.83 2.59
3922 5600 3.933861 AACTTTCTGTTCACCAGGACT 57.066 42.857 0.00 0.00 41.83 3.85
3923 5601 4.983671 AAAACTTTCTGTTCACCAGGAC 57.016 40.909 0.00 0.00 41.83 3.85
3924 5602 4.578928 GCTAAAACTTTCTGTTCACCAGGA 59.421 41.667 0.00 0.00 41.83 3.86
3925 5603 4.580580 AGCTAAAACTTTCTGTTCACCAGG 59.419 41.667 0.00 0.00 41.83 4.45
3926 5604 5.529060 AGAGCTAAAACTTTCTGTTCACCAG 59.471 40.000 0.00 0.00 42.97 4.00
3927 5605 5.437060 AGAGCTAAAACTTTCTGTTCACCA 58.563 37.500 0.00 0.00 38.03 4.17
3928 5606 6.706716 ACTAGAGCTAAAACTTTCTGTTCACC 59.293 38.462 0.00 0.00 38.03 4.02
3929 5607 7.716768 ACTAGAGCTAAAACTTTCTGTTCAC 57.283 36.000 0.00 0.00 38.03 3.18
3930 5608 8.639761 ACTACTAGAGCTAAAACTTTCTGTTCA 58.360 33.333 0.00 0.00 38.03 3.18
3933 5611 8.245491 GCTACTACTAGAGCTAAAACTTTCTGT 58.755 37.037 0.00 0.00 35.73 3.41
3934 5612 8.244802 TGCTACTACTAGAGCTAAAACTTTCTG 58.755 37.037 0.00 0.00 39.54 3.02
3935 5613 8.245491 GTGCTACTACTAGAGCTAAAACTTTCT 58.755 37.037 0.00 0.00 39.54 2.52
3936 5614 7.218583 CGTGCTACTACTAGAGCTAAAACTTTC 59.781 40.741 0.00 0.00 39.54 2.62
3937 5615 7.028361 CGTGCTACTACTAGAGCTAAAACTTT 58.972 38.462 0.00 0.00 39.54 2.66
3938 5616 6.373774 TCGTGCTACTACTAGAGCTAAAACTT 59.626 38.462 0.00 0.00 39.54 2.66
3939 5617 5.879223 TCGTGCTACTACTAGAGCTAAAACT 59.121 40.000 0.00 0.00 39.54 2.66
3940 5618 6.116680 TCGTGCTACTACTAGAGCTAAAAC 57.883 41.667 0.00 0.00 39.54 2.43
3941 5619 6.748333 TTCGTGCTACTACTAGAGCTAAAA 57.252 37.500 0.00 0.00 39.54 1.52
3942 5620 6.318144 ACATTCGTGCTACTACTAGAGCTAAA 59.682 38.462 0.00 0.00 39.54 1.85
3943 5621 5.821470 ACATTCGTGCTACTACTAGAGCTAA 59.179 40.000 0.00 0.00 39.54 3.09
3944 5622 5.236695 CACATTCGTGCTACTACTAGAGCTA 59.763 44.000 0.00 0.00 39.54 3.32
3945 5623 4.035792 CACATTCGTGCTACTACTAGAGCT 59.964 45.833 0.00 0.00 39.54 4.09
3946 5624 4.283678 CACATTCGTGCTACTACTAGAGC 58.716 47.826 0.00 0.00 36.06 4.09
3947 5625 4.575236 TCCACATTCGTGCTACTACTAGAG 59.425 45.833 0.00 0.00 42.17 2.43
3948 5626 4.520179 TCCACATTCGTGCTACTACTAGA 58.480 43.478 0.00 0.00 42.17 2.43
3949 5627 4.895224 TCCACATTCGTGCTACTACTAG 57.105 45.455 0.00 0.00 42.17 2.57
3950 5628 5.847111 AATCCACATTCGTGCTACTACTA 57.153 39.130 0.00 0.00 42.17 1.82
3951 5629 4.737855 AATCCACATTCGTGCTACTACT 57.262 40.909 0.00 0.00 42.17 2.57
3952 5630 6.700081 TGAATAATCCACATTCGTGCTACTAC 59.300 38.462 0.00 0.00 42.17 2.73
3953 5631 6.811954 TGAATAATCCACATTCGTGCTACTA 58.188 36.000 0.00 0.00 42.17 1.82
3954 5632 5.670485 TGAATAATCCACATTCGTGCTACT 58.330 37.500 0.00 0.00 42.17 2.57
3955 5633 5.523916 ACTGAATAATCCACATTCGTGCTAC 59.476 40.000 0.00 0.00 42.17 3.58
3956 5634 5.670485 ACTGAATAATCCACATTCGTGCTA 58.330 37.500 0.00 0.00 42.17 3.49
3957 5635 4.517285 ACTGAATAATCCACATTCGTGCT 58.483 39.130 0.00 0.00 42.17 4.40
3958 5636 4.882671 ACTGAATAATCCACATTCGTGC 57.117 40.909 0.00 0.00 42.17 5.34
3959 5637 9.787532 AAAATAACTGAATAATCCACATTCGTG 57.212 29.630 0.00 0.00 43.21 4.35
3973 5651 9.448438 GCCCCAGATTTTTAAAAATAACTGAAT 57.552 29.630 27.68 10.07 38.64 2.57
3974 5652 7.600752 CGCCCCAGATTTTTAAAAATAACTGAA 59.399 33.333 27.68 5.80 38.64 3.02
3975 5653 7.039644 TCGCCCCAGATTTTTAAAAATAACTGA 60.040 33.333 27.68 17.15 38.64 3.41
3976 5654 7.062956 GTCGCCCCAGATTTTTAAAAATAACTG 59.937 37.037 22.82 23.02 38.64 3.16
3977 5655 7.094631 GTCGCCCCAGATTTTTAAAAATAACT 58.905 34.615 22.82 15.13 38.64 2.24
3978 5656 6.034150 CGTCGCCCCAGATTTTTAAAAATAAC 59.966 38.462 22.82 13.37 38.64 1.89
3979 5657 6.094061 CGTCGCCCCAGATTTTTAAAAATAA 58.906 36.000 22.82 0.00 38.64 1.40
3980 5658 5.183522 ACGTCGCCCCAGATTTTTAAAAATA 59.816 36.000 22.82 5.48 38.64 1.40
3981 5659 4.021807 ACGTCGCCCCAGATTTTTAAAAAT 60.022 37.500 22.95 22.95 41.06 1.82
3982 5660 3.318557 ACGTCGCCCCAGATTTTTAAAAA 59.681 39.130 15.38 15.38 0.00 1.94
3983 5661 2.885894 ACGTCGCCCCAGATTTTTAAAA 59.114 40.909 0.00 0.00 0.00 1.52
3984 5662 2.485038 GACGTCGCCCCAGATTTTTAAA 59.515 45.455 0.00 0.00 0.00 1.52
3985 5663 2.078392 GACGTCGCCCCAGATTTTTAA 58.922 47.619 0.00 0.00 0.00 1.52
3986 5664 1.002201 TGACGTCGCCCCAGATTTTTA 59.998 47.619 11.62 0.00 0.00 1.52
3987 5665 0.250553 TGACGTCGCCCCAGATTTTT 60.251 50.000 11.62 0.00 0.00 1.94
3988 5666 0.250553 TTGACGTCGCCCCAGATTTT 60.251 50.000 11.62 0.00 0.00 1.82
3989 5667 0.250553 TTTGACGTCGCCCCAGATTT 60.251 50.000 11.62 0.00 0.00 2.17
3990 5668 0.250553 TTTTGACGTCGCCCCAGATT 60.251 50.000 11.62 0.00 0.00 2.40
3991 5669 0.673644 CTTTTGACGTCGCCCCAGAT 60.674 55.000 11.62 0.00 0.00 2.90
3992 5670 1.301401 CTTTTGACGTCGCCCCAGA 60.301 57.895 11.62 0.00 0.00 3.86
3993 5671 1.291877 CTCTTTTGACGTCGCCCCAG 61.292 60.000 11.62 2.57 0.00 4.45
3994 5672 1.301401 CTCTTTTGACGTCGCCCCA 60.301 57.895 11.62 0.00 0.00 4.96
3995 5673 2.677979 GCTCTTTTGACGTCGCCCC 61.678 63.158 11.62 0.00 0.00 5.80
3996 5674 0.389426 TAGCTCTTTTGACGTCGCCC 60.389 55.000 11.62 0.00 0.00 6.13
3997 5675 1.425412 TTAGCTCTTTTGACGTCGCC 58.575 50.000 11.62 0.00 0.00 5.54
3998 5676 2.475487 AGTTTAGCTCTTTTGACGTCGC 59.525 45.455 11.62 6.92 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.