Multiple sequence alignment - TraesCS3A01G049700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G049700 chr3A 100.000 2393 0 0 1 2393 26240274 26242666 0.000000e+00 4420.0
1 TraesCS3A01G049700 chr3A 77.313 1027 158 39 507 1486 19296291 19297289 9.740000e-149 536.0
2 TraesCS3A01G049700 chr3A 79.305 633 91 25 663 1274 25944737 25944124 7.960000e-110 407.0
3 TraesCS3A01G049700 chr3A 74.329 857 163 31 671 1486 19299751 19300591 6.420000e-81 311.0
4 TraesCS3A01G049700 chr3A 71.429 749 150 36 986 1696 19293258 19293980 3.210000e-29 139.0
5 TraesCS3A01G049700 chr3A 81.560 141 10 9 1802 1928 51437428 51437290 4.210000e-18 102.0
6 TraesCS3A01G049700 chr1B 96.026 453 14 3 1 450 615023811 615024262 0.000000e+00 734.0
7 TraesCS3A01G049700 chr1B 95.796 452 16 3 1 449 564570629 564570178 0.000000e+00 726.0
8 TraesCS3A01G049700 chr1B 84.500 200 21 3 1774 1963 610012975 610012776 3.140000e-44 189.0
9 TraesCS3A01G049700 chr7A 95.787 451 16 2 1 448 692300677 692300227 0.000000e+00 725.0
10 TraesCS3A01G049700 chr5A 95.964 446 17 1 1 445 27523990 27523545 0.000000e+00 723.0
11 TraesCS3A01G049700 chr5A 84.651 215 10 9 1772 1963 638819950 638819736 2.430000e-45 193.0
12 TraesCS3A01G049700 chr7B 95.759 448 16 2 1 445 631694985 631694538 0.000000e+00 719.0
13 TraesCS3A01G049700 chr7B 95.319 235 10 1 2160 2393 604112311 604112077 2.910000e-99 372.0
14 TraesCS3A01G049700 chr7B 94.561 239 11 2 2157 2393 479234650 479234888 3.760000e-98 368.0
15 TraesCS3A01G049700 chr7B 95.633 229 10 0 2160 2388 601779582 601779354 3.760000e-98 368.0
16 TraesCS3A01G049700 chr7B 85.057 174 21 3 1792 1963 231199658 231199828 3.160000e-39 172.0
17 TraesCS3A01G049700 chr4B 95.768 449 14 4 1 445 67496377 67495930 0.000000e+00 719.0
18 TraesCS3A01G049700 chr4B 84.091 176 24 4 1774 1949 498417185 498417356 1.470000e-37 167.0
19 TraesCS3A01G049700 chr3B 95.374 454 17 3 1 451 30295476 30295024 0.000000e+00 719.0
20 TraesCS3A01G049700 chr3B 95.721 444 19 0 1 444 252924217 252924660 0.000000e+00 715.0
21 TraesCS3A01G049700 chr3B 93.061 245 16 1 2150 2393 214715631 214715387 8.130000e-95 357.0
22 TraesCS3A01G049700 chr3B 77.148 512 97 15 985 1486 30198118 30198619 1.810000e-71 279.0
23 TraesCS3A01G049700 chr3B 76.684 386 81 7 1086 1467 29714754 29715134 3.120000e-49 206.0
24 TraesCS3A01G049700 chr3B 75.000 400 86 12 1086 1480 29722030 29722420 3.160000e-39 172.0
25 TraesCS3A01G049700 chr3B 84.746 177 21 5 629 804 30137543 30137714 3.160000e-39 172.0
26 TraesCS3A01G049700 chr3B 85.185 162 18 6 1805 1963 52934338 52934180 6.850000e-36 161.0
27 TraesCS3A01G049700 chr3B 85.714 112 16 0 1084 1195 29617144 29617255 4.180000e-23 119.0
28 TraesCS3A01G049700 chr6B 94.945 455 18 5 1 451 11016511 11016964 0.000000e+00 708.0
29 TraesCS3A01G049700 chr6B 94.492 236 12 1 2159 2393 289779010 289779245 1.750000e-96 363.0
30 TraesCS3A01G049700 chr6B 94.850 233 11 1 2162 2393 469777110 469776878 1.750000e-96 363.0
31 TraesCS3A01G049700 chr6B 94.850 233 11 1 2162 2393 657253610 657253378 1.750000e-96 363.0
32 TraesCS3A01G049700 chr6B 87.413 143 17 1 1819 1961 91000720 91000579 1.900000e-36 163.0
33 TraesCS3A01G049700 chr6B 84.146 164 16 9 1792 1952 689526075 689526231 1.480000e-32 150.0
34 TraesCS3A01G049700 chrUn 78.165 861 143 25 657 1487 306756984 306757829 7.630000e-140 507.0
35 TraesCS3A01G049700 chrUn 94.828 232 12 0 2162 2393 312895047 312894816 1.750000e-96 363.0
36 TraesCS3A01G049700 chrUn 82.440 336 35 9 629 943 306758619 306758951 3.030000e-69 272.0
37 TraesCS3A01G049700 chr5B 93.388 242 15 1 2153 2393 527330528 527330769 8.130000e-95 357.0
38 TraesCS3A01G049700 chr3D 80.619 485 49 20 629 1074 11345926 11346404 1.370000e-87 333.0
39 TraesCS3A01G049700 chr3D 86.667 180 24 0 990 1169 17650087 17649908 1.450000e-47 200.0
40 TraesCS3A01G049700 chr3D 90.698 129 12 0 1835 1963 250382873 250382745 3.160000e-39 172.0
41 TraesCS3A01G049700 chr3D 88.034 117 11 3 671 786 17648460 17648346 4.150000e-28 135.0
42 TraesCS3A01G049700 chr3D 72.353 510 111 22 986 1479 17369728 17370223 1.490000e-27 134.0
43 TraesCS3A01G049700 chr3D 82.105 95 14 3 1602 1694 11337504 11337597 7.090000e-11 78.7
44 TraesCS3A01G049700 chr2B 88.000 150 18 0 1814 1963 366849305 366849156 6.800000e-41 178.0
45 TraesCS3A01G049700 chr2B 96.875 32 0 1 1960 1991 301389445 301389475 4.000000e-03 52.8
46 TraesCS3A01G049700 chr1A 83.256 215 13 9 1772 1963 203010735 203010949 2.440000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G049700 chr3A 26240274 26242666 2392 False 4420.000000 4420 100.0000 1 2393 1 chr3A.!!$F1 2392
1 TraesCS3A01G049700 chr3A 25944124 25944737 613 True 407.000000 407 79.3050 663 1274 1 chr3A.!!$R1 611
2 TraesCS3A01G049700 chr3A 19293258 19300591 7333 False 328.666667 536 74.3570 507 1696 3 chr3A.!!$F2 1189
3 TraesCS3A01G049700 chr3B 30198118 30198619 501 False 279.000000 279 77.1480 985 1486 1 chr3B.!!$F5 501
4 TraesCS3A01G049700 chrUn 306756984 306758951 1967 False 389.500000 507 80.3025 629 1487 2 chrUn.!!$F1 858

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 370 0.030101 TTTAGGCGTGTTTGTGCTGC 59.97 50.0 0.0 0.0 0.0 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1534 4149 0.038744 AAGCCTTGCACAGCATACCT 59.961 50.0 9.65 0.0 38.76 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.803426 CGGTCTGGTGGCGAGCTC 62.803 72.222 2.73 2.73 0.00 4.09
21 22 4.459089 GGTCTGGTGGCGAGCTCC 62.459 72.222 8.47 0.47 0.00 4.70
22 23 4.803426 GTCTGGTGGCGAGCTCCG 62.803 72.222 8.47 4.62 42.21 4.63
26 27 3.450115 GGTGGCGAGCTCCGTAGT 61.450 66.667 8.47 0.00 41.15 2.73
27 28 2.202623 GTGGCGAGCTCCGTAGTG 60.203 66.667 8.47 0.00 41.15 2.74
28 29 4.129737 TGGCGAGCTCCGTAGTGC 62.130 66.667 8.47 4.18 41.15 4.40
32 33 2.407428 CGAGCTCCGTAGTGCCTGA 61.407 63.158 8.47 0.00 32.81 3.86
33 34 1.435515 GAGCTCCGTAGTGCCTGAG 59.564 63.158 0.87 0.00 32.81 3.35
34 35 2.010582 GAGCTCCGTAGTGCCTGAGG 62.011 65.000 0.87 0.00 32.81 3.86
35 36 2.352032 GCTCCGTAGTGCCTGAGGT 61.352 63.158 0.00 0.00 0.00 3.85
36 37 1.035932 GCTCCGTAGTGCCTGAGGTA 61.036 60.000 0.00 0.00 0.00 3.08
37 38 1.025812 CTCCGTAGTGCCTGAGGTAG 58.974 60.000 0.00 0.00 0.00 3.18
38 39 0.622136 TCCGTAGTGCCTGAGGTAGA 59.378 55.000 0.00 0.00 0.00 2.59
39 40 1.025812 CCGTAGTGCCTGAGGTAGAG 58.974 60.000 0.00 0.00 0.00 2.43
45 46 3.962557 CCTGAGGTAGAGGCTGGG 58.037 66.667 0.00 0.00 0.00 4.45
46 47 1.311403 CCTGAGGTAGAGGCTGGGA 59.689 63.158 0.00 0.00 0.00 4.37
47 48 0.105246 CCTGAGGTAGAGGCTGGGAT 60.105 60.000 0.00 0.00 0.00 3.85
48 49 1.337118 CTGAGGTAGAGGCTGGGATC 58.663 60.000 0.00 0.00 0.00 3.36
49 50 0.468214 TGAGGTAGAGGCTGGGATCG 60.468 60.000 0.00 0.00 0.00 3.69
50 51 1.152440 AGGTAGAGGCTGGGATCGG 60.152 63.158 0.00 0.00 0.00 4.18
51 52 2.210711 GGTAGAGGCTGGGATCGGG 61.211 68.421 0.00 0.00 0.00 5.14
52 53 1.152525 GTAGAGGCTGGGATCGGGA 60.153 63.158 0.00 0.00 0.00 5.14
53 54 1.153989 TAGAGGCTGGGATCGGGAG 59.846 63.158 0.00 0.00 0.00 4.30
54 55 1.361176 TAGAGGCTGGGATCGGGAGA 61.361 60.000 0.00 0.00 46.90 3.71
55 56 1.762460 GAGGCTGGGATCGGGAGAA 60.762 63.158 0.00 0.00 45.37 2.87
56 57 1.306997 AGGCTGGGATCGGGAGAAA 60.307 57.895 0.00 0.00 45.37 2.52
57 58 0.695803 AGGCTGGGATCGGGAGAAAT 60.696 55.000 0.00 0.00 45.37 2.17
59 60 0.761802 GCTGGGATCGGGAGAAATCT 59.238 55.000 0.00 0.00 45.37 2.40
60 61 1.141858 GCTGGGATCGGGAGAAATCTT 59.858 52.381 0.00 0.00 45.37 2.40
61 62 2.422093 GCTGGGATCGGGAGAAATCTTT 60.422 50.000 0.00 0.00 45.37 2.52
62 63 3.209410 CTGGGATCGGGAGAAATCTTTG 58.791 50.000 0.00 0.00 45.37 2.77
63 64 2.576191 TGGGATCGGGAGAAATCTTTGT 59.424 45.455 0.00 0.00 45.37 2.83
64 65 3.010138 TGGGATCGGGAGAAATCTTTGTT 59.990 43.478 0.00 0.00 45.37 2.83
65 66 3.378427 GGGATCGGGAGAAATCTTTGTTG 59.622 47.826 0.00 0.00 45.37 3.33
69 70 2.558359 CGGGAGAAATCTTTGTTGGCTT 59.442 45.455 0.00 0.00 0.00 4.35
70 71 3.612479 CGGGAGAAATCTTTGTTGGCTTG 60.612 47.826 0.00 0.00 0.00 4.01
71 72 3.306294 GGGAGAAATCTTTGTTGGCTTGG 60.306 47.826 0.00 0.00 0.00 3.61
72 73 3.320626 GAGAAATCTTTGTTGGCTTGGC 58.679 45.455 0.00 0.00 0.00 4.52
84 85 4.657824 CTTGGCCGACACCGACGT 62.658 66.667 0.00 0.00 38.22 4.34
85 86 4.953868 TTGGCCGACACCGACGTG 62.954 66.667 0.00 0.00 46.11 4.49
109 110 3.324930 CCTGAGGGTGCTGCCAGA 61.325 66.667 0.00 0.00 39.65 3.86
110 111 2.046507 CTGAGGGTGCTGCCAGAC 60.047 66.667 0.00 0.00 39.65 3.51
111 112 3.618780 CTGAGGGTGCTGCCAGACC 62.619 68.421 0.00 0.00 39.65 3.85
112 113 3.325753 GAGGGTGCTGCCAGACCT 61.326 66.667 11.45 7.74 39.65 3.85
113 114 2.856000 AGGGTGCTGCCAGACCTT 60.856 61.111 11.45 3.55 39.65 3.50
114 115 2.360475 GGGTGCTGCCAGACCTTC 60.360 66.667 11.45 0.00 39.65 3.46
115 116 2.753029 GGTGCTGCCAGACCTTCT 59.247 61.111 0.00 0.00 37.17 2.85
116 117 1.073897 GGTGCTGCCAGACCTTCTT 59.926 57.895 0.00 0.00 37.17 2.52
122 123 2.045926 CCAGACCTTCTTGGCGGG 60.046 66.667 0.00 0.00 40.22 6.13
123 124 2.747855 CAGACCTTCTTGGCGGGC 60.748 66.667 0.00 0.00 40.22 6.13
124 125 4.394712 AGACCTTCTTGGCGGGCG 62.395 66.667 0.00 0.00 40.22 6.13
125 126 4.699522 GACCTTCTTGGCGGGCGT 62.700 66.667 0.00 0.00 40.22 5.68
126 127 4.699522 ACCTTCTTGGCGGGCGTC 62.700 66.667 0.00 0.00 40.22 5.19
146 147 2.829094 GGGCTACCCTTCCTCTCTC 58.171 63.158 0.00 0.00 41.34 3.20
150 151 1.975660 CTACCCTTCCTCTCTCCTCG 58.024 60.000 0.00 0.00 0.00 4.63
154 155 1.751162 CTTCCTCTCTCCTCGCCGT 60.751 63.158 0.00 0.00 0.00 5.68
155 156 1.999071 CTTCCTCTCTCCTCGCCGTG 61.999 65.000 0.00 0.00 0.00 4.94
156 157 2.752238 CCTCTCTCCTCGCCGTGT 60.752 66.667 0.00 0.00 0.00 4.49
157 158 1.451567 CCTCTCTCCTCGCCGTGTA 60.452 63.158 0.00 0.00 0.00 2.90
158 159 1.716826 CCTCTCTCCTCGCCGTGTAC 61.717 65.000 0.00 0.00 0.00 2.90
159 160 1.716826 CTCTCTCCTCGCCGTGTACC 61.717 65.000 0.00 0.00 0.00 3.34
160 161 3.109612 CTCTCCTCGCCGTGTACCG 62.110 68.421 0.00 0.00 0.00 4.02
180 181 3.369921 GGAAACCCTTGGCAGCAG 58.630 61.111 0.00 0.00 0.00 4.24
182 183 3.273080 GAAACCCTTGGCAGCAGCG 62.273 63.158 0.00 0.00 43.41 5.18
183 184 4.586235 AACCCTTGGCAGCAGCGT 62.586 61.111 0.00 0.00 43.41 5.07
188 189 4.600576 TTGGCAGCAGCGTCGTCA 62.601 61.111 0.00 0.00 43.41 4.35
189 190 3.881952 TTGGCAGCAGCGTCGTCAT 62.882 57.895 0.00 0.00 43.41 3.06
191 192 3.906649 GCAGCAGCGTCGTCATCG 61.907 66.667 0.00 0.00 38.55 3.84
192 193 2.504899 CAGCAGCGTCGTCATCGT 60.505 61.111 0.00 0.00 38.33 3.73
193 194 2.202492 AGCAGCGTCGTCATCGTC 60.202 61.111 0.00 0.00 38.33 4.20
194 195 3.598562 GCAGCGTCGTCATCGTCG 61.599 66.667 0.00 3.42 46.99 5.12
198 199 3.295462 CGTCGTCATCGTCGCGTC 61.295 66.667 5.77 0.00 40.72 5.19
199 200 2.943034 GTCGTCATCGTCGCGTCC 60.943 66.667 5.77 0.00 38.33 4.79
200 201 4.170062 TCGTCATCGTCGCGTCCC 62.170 66.667 5.77 0.00 38.33 4.46
201 202 4.175489 CGTCATCGTCGCGTCCCT 62.175 66.667 5.77 0.00 0.00 4.20
204 205 2.044555 TCATCGTCGCGTCCCTTCT 61.045 57.895 5.77 0.00 0.00 2.85
205 206 1.153823 CATCGTCGCGTCCCTTCTT 60.154 57.895 5.77 0.00 0.00 2.52
206 207 1.153823 ATCGTCGCGTCCCTTCTTG 60.154 57.895 5.77 0.00 0.00 3.02
207 208 1.592400 ATCGTCGCGTCCCTTCTTGA 61.592 55.000 5.77 0.00 0.00 3.02
208 209 1.372499 CGTCGCGTCCCTTCTTGAA 60.372 57.895 5.77 0.00 0.00 2.69
209 210 1.344942 CGTCGCGTCCCTTCTTGAAG 61.345 60.000 5.77 3.55 0.00 3.02
210 211 1.014564 GTCGCGTCCCTTCTTGAAGG 61.015 60.000 19.53 19.53 39.68 3.46
212 213 1.291877 CGCGTCCCTTCTTGAAGGTG 61.292 60.000 23.12 16.15 38.28 4.00
213 214 0.250338 GCGTCCCTTCTTGAAGGTGT 60.250 55.000 23.12 0.00 38.28 4.16
214 215 1.814248 GCGTCCCTTCTTGAAGGTGTT 60.814 52.381 23.12 0.00 38.28 3.32
215 216 1.873591 CGTCCCTTCTTGAAGGTGTTG 59.126 52.381 23.12 11.35 38.28 3.33
216 217 2.745152 CGTCCCTTCTTGAAGGTGTTGT 60.745 50.000 23.12 0.00 38.28 3.32
217 218 3.288092 GTCCCTTCTTGAAGGTGTTGTT 58.712 45.455 23.12 0.00 38.28 2.83
218 219 3.066760 GTCCCTTCTTGAAGGTGTTGTTG 59.933 47.826 23.12 9.88 38.28 3.33
219 220 2.362077 CCCTTCTTGAAGGTGTTGTTGG 59.638 50.000 23.12 6.25 38.28 3.77
220 221 2.362077 CCTTCTTGAAGGTGTTGTTGGG 59.638 50.000 18.52 0.00 35.22 4.12
222 223 3.935818 TCTTGAAGGTGTTGTTGGGTA 57.064 42.857 0.00 0.00 0.00 3.69
239 240 1.272769 GGTACCTGCACTTCGAAGTCT 59.727 52.381 27.54 5.03 37.08 3.24
240 241 2.597520 GTACCTGCACTTCGAAGTCTC 58.402 52.381 27.54 20.97 37.08 3.36
241 242 0.039074 ACCTGCACTTCGAAGTCTCG 60.039 55.000 27.54 17.56 46.87 4.04
242 243 0.734253 CCTGCACTTCGAAGTCTCGG 60.734 60.000 27.54 23.48 45.49 4.63
243 244 0.241213 CTGCACTTCGAAGTCTCGGA 59.759 55.000 27.54 16.65 45.49 4.55
248 249 1.623359 CTTCGAAGTCTCGGAGCTTG 58.377 55.000 17.24 10.25 43.61 4.01
250 251 0.894184 TCGAAGTCTCGGAGCTTGGT 60.894 55.000 15.95 0.00 45.49 3.67
251 252 0.734253 CGAAGTCTCGGAGCTTGGTG 60.734 60.000 15.95 5.76 41.57 4.17
252 253 0.390472 GAAGTCTCGGAGCTTGGTGG 60.390 60.000 15.95 0.00 0.00 4.61
253 254 1.831652 AAGTCTCGGAGCTTGGTGGG 61.832 60.000 11.97 0.00 0.00 4.61
254 255 2.203788 TCTCGGAGCTTGGTGGGT 60.204 61.111 0.00 0.00 0.00 4.51
256 257 2.525629 TCGGAGCTTGGTGGGTGA 60.526 61.111 0.00 0.00 0.00 4.02
257 258 1.903877 CTCGGAGCTTGGTGGGTGAT 61.904 60.000 0.00 0.00 0.00 3.06
258 259 1.450312 CGGAGCTTGGTGGGTGATC 60.450 63.158 0.00 0.00 0.00 2.92
260 261 0.107459 GGAGCTTGGTGGGTGATCTC 60.107 60.000 0.00 0.00 0.00 2.75
261 262 0.107459 GAGCTTGGTGGGTGATCTCC 60.107 60.000 5.18 5.18 0.00 3.71
262 263 1.450312 GCTTGGTGGGTGATCTCCG 60.450 63.158 7.70 0.00 0.00 4.63
264 265 1.537889 TTGGTGGGTGATCTCCGGT 60.538 57.895 0.00 0.00 0.00 5.28
265 266 1.836999 TTGGTGGGTGATCTCCGGTG 61.837 60.000 0.00 0.00 0.00 4.94
266 267 2.584608 GTGGGTGATCTCCGGTGG 59.415 66.667 0.00 0.00 0.00 4.61
268 269 1.987855 TGGGTGATCTCCGGTGGAC 60.988 63.158 0.00 0.00 0.00 4.02
269 270 2.494918 GGTGATCTCCGGTGGACG 59.505 66.667 0.00 0.00 43.80 4.79
270 271 2.202756 GTGATCTCCGGTGGACGC 60.203 66.667 0.00 0.00 42.52 5.19
272 273 2.105128 GATCTCCGGTGGACGCAG 59.895 66.667 0.00 0.00 42.52 5.18
273 274 4.148825 ATCTCCGGTGGACGCAGC 62.149 66.667 0.00 0.00 42.52 5.25
297 298 3.345087 CGAGGCTTCGTCGTTTTTG 57.655 52.632 10.50 0.00 41.84 2.44
298 299 0.580104 CGAGGCTTCGTCGTTTTTGT 59.420 50.000 10.50 0.00 41.84 2.83
299 300 1.004292 CGAGGCTTCGTCGTTTTTGTT 60.004 47.619 10.50 0.00 41.84 2.83
301 302 2.011222 AGGCTTCGTCGTTTTTGTTGA 58.989 42.857 0.00 0.00 0.00 3.18
302 303 2.616842 AGGCTTCGTCGTTTTTGTTGAT 59.383 40.909 0.00 0.00 0.00 2.57
303 304 2.971261 GGCTTCGTCGTTTTTGTTGATC 59.029 45.455 0.00 0.00 0.00 2.92
305 306 2.934107 TCGTCGTTTTTGTTGATCCG 57.066 45.000 0.00 0.00 0.00 4.18
306 307 1.070443 TCGTCGTTTTTGTTGATCCGC 60.070 47.619 0.00 0.00 0.00 5.54
307 308 1.681825 GTCGTTTTTGTTGATCCGCC 58.318 50.000 0.00 0.00 0.00 6.13
308 309 0.236187 TCGTTTTTGTTGATCCGCCG 59.764 50.000 0.00 0.00 0.00 6.46
309 310 0.040781 CGTTTTTGTTGATCCGCCGT 60.041 50.000 0.00 0.00 0.00 5.68
310 311 1.598430 CGTTTTTGTTGATCCGCCGTT 60.598 47.619 0.00 0.00 0.00 4.44
312 313 3.668491 CGTTTTTGTTGATCCGCCGTTAT 60.668 43.478 0.00 0.00 0.00 1.89
313 314 3.750639 TTTTGTTGATCCGCCGTTATC 57.249 42.857 0.00 0.00 0.00 1.75
314 315 1.282817 TTGTTGATCCGCCGTTATCG 58.717 50.000 0.00 0.00 0.00 2.92
331 332 5.856455 CGTTATCGGCATTTGTTTCTTTTCT 59.144 36.000 0.00 0.00 0.00 2.52
332 333 6.362283 CGTTATCGGCATTTGTTTCTTTTCTT 59.638 34.615 0.00 0.00 0.00 2.52
333 334 7.096230 CGTTATCGGCATTTGTTTCTTTTCTTT 60.096 33.333 0.00 0.00 0.00 2.52
334 335 8.547894 GTTATCGGCATTTGTTTCTTTTCTTTT 58.452 29.630 0.00 0.00 0.00 2.27
357 358 5.941948 TTCTCTTTCCTTTCTTTTAGGCG 57.058 39.130 0.00 0.00 32.59 5.52
359 360 4.755123 TCTCTTTCCTTTCTTTTAGGCGTG 59.245 41.667 0.00 0.00 32.59 5.34
361 362 4.885325 TCTTTCCTTTCTTTTAGGCGTGTT 59.115 37.500 0.00 0.00 32.59 3.32
362 363 5.358725 TCTTTCCTTTCTTTTAGGCGTGTTT 59.641 36.000 0.00 0.00 32.59 2.83
363 364 4.561735 TCCTTTCTTTTAGGCGTGTTTG 57.438 40.909 0.00 0.00 32.59 2.93
364 365 3.949113 TCCTTTCTTTTAGGCGTGTTTGT 59.051 39.130 0.00 0.00 32.59 2.83
365 366 4.041723 CCTTTCTTTTAGGCGTGTTTGTG 58.958 43.478 0.00 0.00 0.00 3.33
366 367 2.766970 TCTTTTAGGCGTGTTTGTGC 57.233 45.000 0.00 0.00 0.00 4.57
367 368 2.294074 TCTTTTAGGCGTGTTTGTGCT 58.706 42.857 0.00 0.00 0.00 4.40
368 369 2.032799 TCTTTTAGGCGTGTTTGTGCTG 59.967 45.455 0.00 0.00 0.00 4.41
369 370 0.030101 TTTAGGCGTGTTTGTGCTGC 59.970 50.000 0.00 0.00 0.00 5.25
370 371 0.817634 TTAGGCGTGTTTGTGCTGCT 60.818 50.000 0.00 0.00 0.00 4.24
371 372 0.817634 TAGGCGTGTTTGTGCTGCTT 60.818 50.000 0.00 0.00 0.00 3.91
372 373 1.658409 GGCGTGTTTGTGCTGCTTC 60.658 57.895 0.00 0.00 0.00 3.86
373 374 1.658409 GCGTGTTTGTGCTGCTTCC 60.658 57.895 0.00 0.00 0.00 3.46
374 375 1.369209 CGTGTTTGTGCTGCTTCCG 60.369 57.895 0.00 0.00 0.00 4.30
375 376 1.658409 GTGTTTGTGCTGCTTCCGC 60.658 57.895 0.00 0.00 0.00 5.54
376 377 2.050077 GTTTGTGCTGCTTCCGCC 60.050 61.111 0.00 0.00 34.43 6.13
377 378 3.294493 TTTGTGCTGCTTCCGCCC 61.294 61.111 0.00 0.00 34.43 6.13
387 388 4.835456 TTCCGCCCCAGCCCCTAT 62.835 66.667 0.00 0.00 34.57 2.57
391 392 3.942439 GCCCCAGCCCCTATCGTC 61.942 72.222 0.00 0.00 0.00 4.20
392 393 3.616721 CCCCAGCCCCTATCGTCG 61.617 72.222 0.00 0.00 0.00 5.12
393 394 3.616721 CCCAGCCCCTATCGTCGG 61.617 72.222 0.00 0.00 0.00 4.79
394 395 2.838225 CCAGCCCCTATCGTCGGT 60.838 66.667 0.00 0.00 0.00 4.69
395 396 2.432300 CCAGCCCCTATCGTCGGTT 61.432 63.158 0.00 0.00 0.00 4.44
396 397 1.227263 CAGCCCCTATCGTCGGTTG 60.227 63.158 0.00 0.00 0.00 3.77
398 399 0.396139 AGCCCCTATCGTCGGTTGTA 60.396 55.000 0.00 0.00 0.00 2.41
399 400 0.677842 GCCCCTATCGTCGGTTGTAT 59.322 55.000 0.00 0.00 0.00 2.29
401 402 1.068748 CCCCTATCGTCGGTTGTATCG 60.069 57.143 0.00 0.00 0.00 2.92
403 404 1.605710 CCTATCGTCGGTTGTATCGGT 59.394 52.381 0.00 0.00 0.00 4.69
404 405 2.033801 CCTATCGTCGGTTGTATCGGTT 59.966 50.000 0.00 0.00 0.00 4.44
406 407 0.109179 TCGTCGGTTGTATCGGTTGG 60.109 55.000 0.00 0.00 0.00 3.77
407 408 0.388907 CGTCGGTTGTATCGGTTGGT 60.389 55.000 0.00 0.00 0.00 3.67
408 409 1.799544 GTCGGTTGTATCGGTTGGTT 58.200 50.000 0.00 0.00 0.00 3.67
409 410 1.461897 GTCGGTTGTATCGGTTGGTTG 59.538 52.381 0.00 0.00 0.00 3.77
410 411 1.070445 TCGGTTGTATCGGTTGGTTGT 59.930 47.619 0.00 0.00 0.00 3.32
411 412 1.874872 CGGTTGTATCGGTTGGTTGTT 59.125 47.619 0.00 0.00 0.00 2.83
413 414 3.243134 CGGTTGTATCGGTTGGTTGTTTT 60.243 43.478 0.00 0.00 0.00 2.43
414 415 4.045783 GGTTGTATCGGTTGGTTGTTTTG 58.954 43.478 0.00 0.00 0.00 2.44
415 416 4.440387 GGTTGTATCGGTTGGTTGTTTTGT 60.440 41.667 0.00 0.00 0.00 2.83
416 417 5.221009 GGTTGTATCGGTTGGTTGTTTTGTA 60.221 40.000 0.00 0.00 0.00 2.41
417 418 6.264088 GTTGTATCGGTTGGTTGTTTTGTAA 58.736 36.000 0.00 0.00 0.00 2.41
419 420 7.741027 TGTATCGGTTGGTTGTTTTGTAATA 57.259 32.000 0.00 0.00 0.00 0.98
420 421 7.583230 TGTATCGGTTGGTTGTTTTGTAATAC 58.417 34.615 0.00 0.00 0.00 1.89
421 422 6.636562 ATCGGTTGGTTGTTTTGTAATACA 57.363 33.333 0.00 0.00 0.00 2.29
422 423 6.446781 TCGGTTGGTTGTTTTGTAATACAA 57.553 33.333 1.08 1.08 36.11 2.41
423 424 6.860080 TCGGTTGGTTGTTTTGTAATACAAA 58.140 32.000 13.93 13.93 45.37 2.83
431 432 3.436577 TTTGTAATACAAAGCGGGGGA 57.563 42.857 13.93 0.00 42.55 4.81
432 433 3.436577 TTGTAATACAAAGCGGGGGAA 57.563 42.857 2.97 0.00 34.76 3.97
433 434 2.713877 TGTAATACAAAGCGGGGGAAC 58.286 47.619 0.00 0.00 0.00 3.62
449 450 3.696281 GGAACCCTTTTTCGTCGAAAA 57.304 42.857 25.25 25.25 39.36 2.29
450 451 4.031418 GGAACCCTTTTTCGTCGAAAAA 57.969 40.909 32.54 32.54 45.38 1.94
469 470 8.949953 TCGAAAAAGAAAGTAAAATAAACTGCG 58.050 29.630 0.00 0.00 0.00 5.18
470 471 8.739461 CGAAAAAGAAAGTAAAATAAACTGCGT 58.261 29.630 0.00 0.00 0.00 5.24
473 474 9.454585 AAAAGAAAGTAAAATAAACTGCGTACC 57.545 29.630 0.00 0.00 0.00 3.34
474 475 7.974482 AGAAAGTAAAATAAACTGCGTACCT 57.026 32.000 0.00 0.00 0.00 3.08
475 476 9.492973 AAGAAAGTAAAATAAACTGCGTACCTA 57.507 29.630 0.00 0.00 0.00 3.08
488 489 8.550710 AACTGCGTACCTAAATAAAATGTGTA 57.449 30.769 0.00 0.00 0.00 2.90
489 490 8.193250 ACTGCGTACCTAAATAAAATGTGTAG 57.807 34.615 0.00 0.00 0.00 2.74
490 491 7.007313 TGCGTACCTAAATAAAATGTGTAGC 57.993 36.000 0.00 0.00 0.00 3.58
491 492 6.037391 TGCGTACCTAAATAAAATGTGTAGCC 59.963 38.462 0.00 0.00 0.00 3.93
492 493 6.259387 GCGTACCTAAATAAAATGTGTAGCCT 59.741 38.462 0.00 0.00 0.00 4.58
493 494 7.439056 GCGTACCTAAATAAAATGTGTAGCCTA 59.561 37.037 0.00 0.00 0.00 3.93
494 495 9.316730 CGTACCTAAATAAAATGTGTAGCCTAA 57.683 33.333 0.00 0.00 0.00 2.69
497 498 9.969001 ACCTAAATAAAATGTGTAGCCTAAGAA 57.031 29.630 0.00 0.00 0.00 2.52
505 506 9.914131 AAAATGTGTAGCCTAAGAAAAATCTTC 57.086 29.630 0.00 0.00 0.00 2.87
506 507 8.635765 AATGTGTAGCCTAAGAAAAATCTTCA 57.364 30.769 0.00 0.00 0.00 3.02
507 508 8.814038 ATGTGTAGCCTAAGAAAAATCTTCAT 57.186 30.769 0.00 0.00 0.00 2.57
508 509 9.905713 ATGTGTAGCCTAAGAAAAATCTTCATA 57.094 29.630 0.00 0.00 0.00 2.15
509 510 9.733556 TGTGTAGCCTAAGAAAAATCTTCATAA 57.266 29.630 0.00 0.00 0.00 1.90
520 521 9.455847 AGAAAAATCTTCATAAAATATGCTCGC 57.544 29.630 0.00 0.00 0.00 5.03
521 522 9.455847 GAAAAATCTTCATAAAATATGCTCGCT 57.544 29.630 0.00 0.00 0.00 4.93
527 3056 9.935682 TCTTCATAAAATATGCTCGCTAAAAAG 57.064 29.630 0.00 0.00 0.00 2.27
528 3057 9.173939 CTTCATAAAATATGCTCGCTAAAAAGG 57.826 33.333 0.00 0.00 0.00 3.11
541 3070 7.218963 GCTCGCTAAAAAGGTCTGAATAAAATG 59.781 37.037 0.00 0.00 0.00 2.32
547 3076 8.871686 AAAAAGGTCTGAATAAAATGTGTGAC 57.128 30.769 0.00 0.00 0.00 3.67
551 3080 5.705441 GGTCTGAATAAAATGTGTGACCTCA 59.295 40.000 0.00 0.00 39.47 3.86
553 3082 7.301054 GTCTGAATAAAATGTGTGACCTCAAG 58.699 38.462 0.00 0.00 0.00 3.02
555 3084 5.048083 TGAATAAAATGTGTGACCTCAAGGC 60.048 40.000 0.00 0.00 39.32 4.35
563 3092 1.876156 GTGACCTCAAGGCTTGAACTG 59.124 52.381 28.27 21.15 39.58 3.16
564 3093 1.202806 TGACCTCAAGGCTTGAACTGG 60.203 52.381 28.27 26.25 39.58 4.00
566 3095 1.494721 ACCTCAAGGCTTGAACTGGAA 59.505 47.619 30.06 10.75 39.58 3.53
570 3099 4.077822 CTCAAGGCTTGAACTGGAATTCT 58.922 43.478 28.27 0.00 39.58 2.40
577 3106 2.795329 TGAACTGGAATTCTCCCTTGC 58.205 47.619 5.23 0.00 41.64 4.01
581 3110 2.893489 ACTGGAATTCTCCCTTGCAAAC 59.107 45.455 5.23 0.00 41.64 2.93
585 3114 4.202243 TGGAATTCTCCCTTGCAAACAAAG 60.202 41.667 5.23 0.00 41.64 2.77
587 3116 4.861102 ATTCTCCCTTGCAAACAAAGAG 57.139 40.909 0.00 2.79 37.49 2.85
592 3121 6.068010 TCTCCCTTGCAAACAAAGAGATTTA 58.932 36.000 0.00 0.00 38.99 1.40
593 3122 6.016276 TCTCCCTTGCAAACAAAGAGATTTAC 60.016 38.462 0.00 0.00 38.99 2.01
624 3153 2.258726 AAAAACCGACTCGCCTGCC 61.259 57.895 0.00 0.00 0.00 4.85
625 3154 2.951475 AAAAACCGACTCGCCTGCCA 62.951 55.000 0.00 0.00 0.00 4.92
626 3155 2.951475 AAAACCGACTCGCCTGCCAA 62.951 55.000 0.00 0.00 0.00 4.52
627 3156 3.883744 AACCGACTCGCCTGCCAAG 62.884 63.158 0.00 0.00 0.00 3.61
628 3157 4.379243 CCGACTCGCCTGCCAAGT 62.379 66.667 0.00 0.00 0.00 3.16
629 3158 3.114616 CGACTCGCCTGCCAAGTG 61.115 66.667 0.00 0.00 0.00 3.16
630 3159 3.426568 GACTCGCCTGCCAAGTGC 61.427 66.667 0.00 0.00 41.77 4.40
633 3162 4.577677 TCGCCTGCCAAGTGCCAA 62.578 61.111 0.00 0.00 40.16 4.52
634 3163 4.047059 CGCCTGCCAAGTGCCAAG 62.047 66.667 0.00 0.00 40.16 3.61
635 3164 2.914097 GCCTGCCAAGTGCCAAGT 60.914 61.111 0.00 0.00 40.16 3.16
636 3165 3.045142 CCTGCCAAGTGCCAAGTG 58.955 61.111 0.00 0.00 40.16 3.16
637 3166 1.829533 CCTGCCAAGTGCCAAGTGT 60.830 57.895 0.00 0.00 40.16 3.55
638 3167 1.361271 CTGCCAAGTGCCAAGTGTG 59.639 57.895 0.00 0.00 40.16 3.82
640 3169 0.682532 TGCCAAGTGCCAAGTGTGAA 60.683 50.000 0.00 0.00 40.16 3.18
641 3170 0.031178 GCCAAGTGCCAAGTGTGAAG 59.969 55.000 0.00 0.00 0.00 3.02
643 3172 1.392589 CAAGTGCCAAGTGTGAAGGT 58.607 50.000 0.00 0.00 0.00 3.50
644 3173 1.750778 CAAGTGCCAAGTGTGAAGGTT 59.249 47.619 0.00 0.00 0.00 3.50
645 3174 1.392589 AGTGCCAAGTGTGAAGGTTG 58.607 50.000 0.00 0.00 0.00 3.77
646 3175 1.102978 GTGCCAAGTGTGAAGGTTGT 58.897 50.000 0.00 0.00 0.00 3.32
648 3177 1.748493 TGCCAAGTGTGAAGGTTGTTC 59.252 47.619 0.00 0.00 0.00 3.18
649 3178 2.024414 GCCAAGTGTGAAGGTTGTTCT 58.976 47.619 0.00 0.00 0.00 3.01
650 3179 3.211045 GCCAAGTGTGAAGGTTGTTCTA 58.789 45.455 0.00 0.00 0.00 2.10
692 3238 7.393216 AGATAGAAGACAAGAGCACAAAGATT 58.607 34.615 0.00 0.00 0.00 2.40
693 3239 5.686159 AGAAGACAAGAGCACAAAGATTG 57.314 39.130 0.00 0.00 0.00 2.67
701 3247 2.686558 GCACAAAGATTGCTCGAACA 57.313 45.000 0.00 0.00 37.00 3.18
731 3278 1.017387 GGCTAAGCATCTTGGTTCCG 58.983 55.000 0.00 0.00 39.08 4.30
741 3288 1.628340 TCTTGGTTCCGGTCACATCAT 59.372 47.619 0.00 0.00 0.00 2.45
743 3290 0.980423 TGGTTCCGGTCACATCATGA 59.020 50.000 0.00 0.00 33.79 3.07
806 3356 5.578776 GGAACCCTGCAATTTTATAAGTCG 58.421 41.667 0.00 0.00 0.00 4.18
832 3382 1.222567 ACCAGTCAAAGGGGTCACTT 58.777 50.000 0.00 0.00 0.00 3.16
847 3408 3.600388 GTCACTTGGACGATGATCCTTT 58.400 45.455 0.00 0.00 39.75 3.11
886 3451 2.550830 ATTTGAACCGCTCACTCTGT 57.449 45.000 0.00 0.00 32.21 3.41
905 3470 1.475682 GTCGTCCGTCCCCATATATCC 59.524 57.143 0.00 0.00 0.00 2.59
909 3474 2.165845 GTCCGTCCCCATATATCCTTCG 59.834 54.545 0.00 0.00 0.00 3.79
911 3476 2.565834 CCGTCCCCATATATCCTTCGTT 59.434 50.000 0.00 0.00 0.00 3.85
928 3501 5.163622 CCTTCGTTCTTAGACCACCGTATTA 60.164 44.000 0.00 0.00 0.00 0.98
937 3510 5.979288 AGACCACCGTATTATCTCATACC 57.021 43.478 0.00 0.00 0.00 2.73
943 3516 6.127703 CCACCGTATTATCTCATACCTGTAGG 60.128 46.154 0.00 0.00 42.17 3.18
946 3519 6.404844 CCGTATTATCTCATACCTGTAGGCTG 60.405 46.154 0.00 0.00 39.32 4.85
947 3520 6.151312 CGTATTATCTCATACCTGTAGGCTGT 59.849 42.308 0.00 0.00 39.32 4.40
948 3521 7.336176 CGTATTATCTCATACCTGTAGGCTGTA 59.664 40.741 0.00 0.00 39.32 2.74
949 3522 7.710676 ATTATCTCATACCTGTAGGCTGTAG 57.289 40.000 0.00 0.00 39.32 2.74
950 3523 3.223435 TCTCATACCTGTAGGCTGTAGC 58.777 50.000 0.00 0.00 39.32 3.58
976 3551 0.318107 CCCTTTGCTGTTTCACTGCG 60.318 55.000 1.91 0.00 44.63 5.18
979 3554 2.483877 CCTTTGCTGTTTCACTGCGATA 59.516 45.455 0.00 0.00 44.63 2.92
993 3575 7.376435 TCACTGCGATATTTTCAAATCTTCA 57.624 32.000 0.00 0.00 0.00 3.02
1029 3611 2.032528 TGCTGGTTCTTCTGGGCG 59.967 61.111 0.00 0.00 0.00 6.13
1051 3633 2.996985 TGGCTACCACTGATGCTCT 58.003 52.632 0.00 0.00 0.00 4.09
1053 3635 0.105778 GGCTACCACTGATGCTCTCC 59.894 60.000 0.00 0.00 0.00 3.71
1076 3658 3.883744 CTGCGGCCGAGGAACAAGT 62.884 63.158 33.48 0.00 0.00 3.16
1081 3663 0.322546 GGCCGAGGAACAAGTGGAAT 60.323 55.000 0.00 0.00 0.00 3.01
1184 3772 0.178944 TCCCCAGACTTCGAGGTCAA 60.179 55.000 27.01 6.55 38.57 3.18
1206 3797 3.080647 CCATAACGGCACTTCTCCC 57.919 57.895 0.00 0.00 0.00 4.30
1219 3810 1.135333 CTTCTCCCGTTCTACTGAGCC 59.865 57.143 0.00 0.00 0.00 4.70
1223 3814 1.217183 TCCCGTTCTACTGAGCCCTAT 59.783 52.381 0.00 0.00 0.00 2.57
1226 3817 2.225963 CCGTTCTACTGAGCCCTATACG 59.774 54.545 0.00 0.00 0.00 3.06
1234 3825 2.434359 GCCCTATACGCATCGGCC 60.434 66.667 0.00 0.00 36.38 6.13
1268 3859 9.056005 TGAAATCATCAATATTTCTTACGAGGG 57.944 33.333 9.27 0.00 41.72 4.30
1274 3865 0.180406 ATTTCTTACGAGGGGCGCAT 59.820 50.000 10.83 0.00 46.04 4.73
1275 3866 0.035820 TTTCTTACGAGGGGCGCATT 60.036 50.000 10.83 0.00 46.04 3.56
1295 3886 0.245266 TTGCGCGTGGTTGATAGAGA 59.755 50.000 8.43 0.00 0.00 3.10
1303 3894 3.367395 CGTGGTTGATAGAGACAAGCTGA 60.367 47.826 0.00 0.00 43.30 4.26
1336 3930 1.446907 CTCCAACAGCTGCCAAGTAG 58.553 55.000 15.27 0.08 0.00 2.57
1338 3932 1.589716 CCAACAGCTGCCAAGTAGCC 61.590 60.000 15.27 0.00 42.06 3.93
1364 3958 0.834612 AACACCTCCGTCAAAGTGGA 59.165 50.000 0.00 0.00 34.50 4.02
1365 3959 1.056660 ACACCTCCGTCAAAGTGGAT 58.943 50.000 0.00 0.00 34.50 3.41
1370 3969 0.902531 TCCGTCAAAGTGGATCTCCC 59.097 55.000 0.00 0.00 34.29 4.30
1371 3970 0.107654 CCGTCAAAGTGGATCTCCCC 60.108 60.000 0.00 0.00 34.29 4.81
1379 3978 1.080354 TGGATCTCCCCGTTCAGGT 59.920 57.895 0.00 0.00 38.74 4.00
1382 3981 1.196012 GATCTCCCCGTTCAGGTTCT 58.804 55.000 0.00 0.00 38.74 3.01
1390 3989 1.759236 GTTCAGGTTCTCCCCCGTT 59.241 57.895 0.00 0.00 0.00 4.44
1405 4004 2.356135 CCCGTTAACCTGAACCTCATG 58.644 52.381 0.00 0.00 0.00 3.07
1429 4028 2.436646 AATTGCACGGAGGAGGCG 60.437 61.111 0.00 0.00 0.00 5.52
1484 4099 2.725008 GGACGAGGATGAGAGCGG 59.275 66.667 0.00 0.00 0.00 5.52
1491 4106 1.153349 GGATGAGAGCGGGGTGTTC 60.153 63.158 0.00 0.00 0.00 3.18
1493 4108 2.227089 GATGAGAGCGGGGTGTTCGT 62.227 60.000 0.00 0.00 32.25 3.85
1517 4132 4.632974 GGCAGGGCGCTAGGATGG 62.633 72.222 7.64 0.00 41.91 3.51
1519 4134 4.632974 CAGGGCGCTAGGATGGGC 62.633 72.222 7.64 0.00 43.82 5.36
1553 4168 0.038744 AGGTATGCTGTGCAAGGCTT 59.961 50.000 12.35 0.00 43.62 4.35
1556 4171 0.321564 TATGCTGTGCAAGGCTTCGT 60.322 50.000 12.35 0.00 43.62 3.85
1563 4178 2.740055 CAAGGCTTCGTCGCTGCT 60.740 61.111 0.00 0.00 0.00 4.24
1576 4191 4.994471 CTGCTGCTGTGCCGGTGA 62.994 66.667 1.90 0.00 0.00 4.02
1578 4193 3.058160 GCTGCTGTGCCGGTGATT 61.058 61.111 1.90 0.00 0.00 2.57
1579 4194 2.872557 CTGCTGTGCCGGTGATTG 59.127 61.111 1.90 0.00 0.00 2.67
1580 4195 2.672651 TGCTGTGCCGGTGATTGG 60.673 61.111 1.90 0.00 0.00 3.16
1581 4196 3.443045 GCTGTGCCGGTGATTGGG 61.443 66.667 1.90 0.00 0.00 4.12
1639 4254 0.179137 CTACGAGCGGCTCATCAACA 60.179 55.000 27.83 6.44 0.00 3.33
1648 4263 2.097825 GGCTCATCAACAATGGCTTCT 58.902 47.619 0.00 0.00 35.94 2.85
1651 4266 3.192001 GCTCATCAACAATGGCTTCTTCA 59.808 43.478 0.00 0.00 35.94 3.02
1656 4271 3.189080 TCAACAATGGCTTCTTCATGACG 59.811 43.478 0.00 0.00 0.00 4.35
1662 4277 1.407437 GGCTTCTTCATGACGTGGGAT 60.407 52.381 0.00 0.00 0.00 3.85
1664 4279 2.555199 CTTCTTCATGACGTGGGATCC 58.445 52.381 1.92 1.92 0.00 3.36
1665 4280 1.567357 TCTTCATGACGTGGGATCCA 58.433 50.000 15.23 0.00 0.00 3.41
1666 4281 1.905894 TCTTCATGACGTGGGATCCAA 59.094 47.619 15.23 0.00 34.18 3.53
1696 4319 4.563524 CGTAAGTTCACTCGTCAAATCC 57.436 45.455 0.00 0.00 0.00 3.01
1698 4321 4.090066 CGTAAGTTCACTCGTCAAATCCTG 59.910 45.833 0.00 0.00 0.00 3.86
1717 4340 3.691609 CCTGTCTTTAATCCACTTCCTGC 59.308 47.826 0.00 0.00 0.00 4.85
1726 4349 2.320781 TCCACTTCCTGCCTAGCTATC 58.679 52.381 0.00 0.00 0.00 2.08
1727 4350 2.091055 TCCACTTCCTGCCTAGCTATCT 60.091 50.000 0.00 0.00 0.00 1.98
1732 4393 1.217942 TCCTGCCTAGCTATCTGACCA 59.782 52.381 0.00 0.00 0.00 4.02
1743 4404 6.924913 AGCTATCTGACCAAGCTATCAATA 57.075 37.500 8.71 0.00 44.55 1.90
1776 4437 6.759827 TCACTTATTGAGGATAAACGTTAGGC 59.240 38.462 0.00 0.00 30.07 3.93
1778 4439 6.761714 ACTTATTGAGGATAAACGTTAGGCTG 59.238 38.462 0.00 0.00 30.07 4.85
1779 4440 3.536956 TGAGGATAAACGTTAGGCTGG 57.463 47.619 0.00 0.00 0.00 4.85
1782 4443 2.159142 AGGATAAACGTTAGGCTGGTCG 60.159 50.000 0.00 1.54 0.00 4.79
1783 4444 2.417787 GGATAAACGTTAGGCTGGTCGT 60.418 50.000 0.00 2.23 38.15 4.34
1784 4445 3.181487 GGATAAACGTTAGGCTGGTCGTA 60.181 47.826 0.00 1.45 35.49 3.43
1785 4446 2.818130 AAACGTTAGGCTGGTCGTAA 57.182 45.000 0.00 0.00 35.49 3.18
1786 4447 3.323751 AAACGTTAGGCTGGTCGTAAT 57.676 42.857 0.00 4.47 35.49 1.89
1787 4448 2.288961 ACGTTAGGCTGGTCGTAATG 57.711 50.000 10.59 0.00 37.79 1.90
1789 4450 1.134907 CGTTAGGCTGGTCGTAATGGT 60.135 52.381 0.00 0.00 31.67 3.55
1790 4451 2.099592 CGTTAGGCTGGTCGTAATGGTA 59.900 50.000 0.00 0.00 31.67 3.25
1793 4454 2.185387 AGGCTGGTCGTAATGGTAAGT 58.815 47.619 0.00 0.00 0.00 2.24
1794 4455 3.368248 AGGCTGGTCGTAATGGTAAGTA 58.632 45.455 0.00 0.00 0.00 2.24
1888 4778 6.603237 TTGTCATGCATAACACATAGTAGC 57.397 37.500 0.89 0.00 0.00 3.58
1890 4780 6.290605 TGTCATGCATAACACATAGTAGCAT 58.709 36.000 0.00 0.00 41.22 3.79
1892 4782 7.930865 TGTCATGCATAACACATAGTAGCATAA 59.069 33.333 0.00 0.00 39.67 1.90
1893 4783 8.223769 GTCATGCATAACACATAGTAGCATAAC 58.776 37.037 0.00 0.00 39.67 1.89
1894 4784 7.930865 TCATGCATAACACATAGTAGCATAACA 59.069 33.333 0.00 0.00 39.67 2.41
1896 4786 8.675705 TGCATAACACATAGTAGCATAACATT 57.324 30.769 0.00 0.00 30.77 2.71
1897 4787 9.119418 TGCATAACACATAGTAGCATAACATTT 57.881 29.630 0.00 0.00 30.77 2.32
1938 4828 9.607333 TCATAATATGATACTCAACCCTCTCTT 57.393 33.333 0.00 0.00 33.59 2.85
1942 4832 6.882768 ATGATACTCAACCCTCTCTTTCTT 57.117 37.500 0.00 0.00 0.00 2.52
1943 4833 6.287589 TGATACTCAACCCTCTCTTTCTTC 57.712 41.667 0.00 0.00 0.00 2.87
1944 4834 5.780282 TGATACTCAACCCTCTCTTTCTTCA 59.220 40.000 0.00 0.00 0.00 3.02
1946 4836 5.574970 ACTCAACCCTCTCTTTCTTCATT 57.425 39.130 0.00 0.00 0.00 2.57
1947 4837 5.946486 ACTCAACCCTCTCTTTCTTCATTT 58.054 37.500 0.00 0.00 0.00 2.32
1950 4840 8.166726 ACTCAACCCTCTCTTTCTTCATTTAAT 58.833 33.333 0.00 0.00 0.00 1.40
1951 4841 8.940397 TCAACCCTCTCTTTCTTCATTTAATT 57.060 30.769 0.00 0.00 0.00 1.40
1952 4842 9.367160 TCAACCCTCTCTTTCTTCATTTAATTT 57.633 29.630 0.00 0.00 0.00 1.82
1953 4843 9.987272 CAACCCTCTCTTTCTTCATTTAATTTT 57.013 29.630 0.00 0.00 0.00 1.82
1978 4868 6.280855 TGTCACCTATGATATCCCATTACG 57.719 41.667 0.00 0.00 37.14 3.18
1979 4869 6.014012 TGTCACCTATGATATCCCATTACGA 58.986 40.000 0.00 0.00 37.14 3.43
1980 4870 6.071560 TGTCACCTATGATATCCCATTACGAC 60.072 42.308 0.00 0.50 37.14 4.34
1983 4873 5.422331 ACCTATGATATCCCATTACGACCAG 59.578 44.000 0.00 0.00 0.00 4.00
1985 4875 2.301870 TGATATCCCATTACGACCAGCC 59.698 50.000 0.00 0.00 0.00 4.85
2028 4918 2.657237 CGGCAACTCGACCTTCCT 59.343 61.111 0.00 0.00 0.00 3.36
2029 4919 1.446272 CGGCAACTCGACCTTCCTC 60.446 63.158 0.00 0.00 0.00 3.71
2030 4920 1.878656 CGGCAACTCGACCTTCCTCT 61.879 60.000 0.00 0.00 0.00 3.69
2035 4925 1.139947 CTCGACCTTCCTCTTCGGC 59.860 63.158 0.00 0.00 33.50 5.54
2036 4926 2.184579 CGACCTTCCTCTTCGGCC 59.815 66.667 0.00 0.00 0.00 6.13
2064 4954 1.078497 TGCGCCCACTTGACCATAG 60.078 57.895 4.18 0.00 0.00 2.23
2066 4956 1.819632 CGCCCACTTGACCATAGCC 60.820 63.158 0.00 0.00 0.00 3.93
2068 4958 0.749454 GCCCACTTGACCATAGCCTG 60.749 60.000 0.00 0.00 0.00 4.85
2080 4970 3.012518 CCATAGCCTGGTTAGCATATGC 58.987 50.000 20.36 20.36 40.49 3.14
2081 4971 3.307975 CCATAGCCTGGTTAGCATATGCT 60.308 47.826 31.60 31.60 46.36 3.79
2082 4972 4.808665 CCATAGCCTGGTTAGCATATGCTT 60.809 45.833 33.74 18.29 44.09 3.91
2083 4973 6.830193 CCATAGCCTGGTTAGCATATGCTTG 61.830 48.000 33.74 20.67 44.09 4.01
2099 4989 9.745323 GCATATGCTTGTTTTAACTTGATTTTC 57.255 29.630 20.64 0.00 38.21 2.29
2102 4992 8.593492 ATGCTTGTTTTAACTTGATTTTCTCC 57.407 30.769 0.00 0.00 0.00 3.71
2103 4993 6.695278 TGCTTGTTTTAACTTGATTTTCTCCG 59.305 34.615 0.00 0.00 0.00 4.63
2104 4994 6.915843 GCTTGTTTTAACTTGATTTTCTCCGA 59.084 34.615 0.00 0.00 0.00 4.55
2105 4995 7.595130 GCTTGTTTTAACTTGATTTTCTCCGAT 59.405 33.333 0.00 0.00 0.00 4.18
2106 4996 9.463443 CTTGTTTTAACTTGATTTTCTCCGATT 57.537 29.630 0.00 0.00 0.00 3.34
2108 4998 8.625651 TGTTTTAACTTGATTTTCTCCGATTCA 58.374 29.630 0.00 0.00 0.00 2.57
2109 4999 9.626045 GTTTTAACTTGATTTTCTCCGATTCAT 57.374 29.630 0.00 0.00 0.00 2.57
2112 5002 5.644644 ACTTGATTTTCTCCGATTCATTGC 58.355 37.500 0.00 0.00 0.00 3.56
2114 5004 5.840243 TGATTTTCTCCGATTCATTGCAT 57.160 34.783 0.00 0.00 0.00 3.96
2115 5005 5.824429 TGATTTTCTCCGATTCATTGCATC 58.176 37.500 0.00 0.00 0.00 3.91
2117 5007 6.767423 TGATTTTCTCCGATTCATTGCATCTA 59.233 34.615 0.00 0.00 0.00 1.98
2118 5008 7.446319 TGATTTTCTCCGATTCATTGCATCTAT 59.554 33.333 0.00 0.00 0.00 1.98
2119 5009 6.791887 TTTCTCCGATTCATTGCATCTATC 57.208 37.500 0.00 0.00 0.00 2.08
2120 5010 5.735285 TCTCCGATTCATTGCATCTATCT 57.265 39.130 0.00 0.00 0.00 1.98
2121 5011 6.106648 TCTCCGATTCATTGCATCTATCTT 57.893 37.500 0.00 0.00 0.00 2.40
2122 5012 6.528321 TCTCCGATTCATTGCATCTATCTTT 58.472 36.000 0.00 0.00 0.00 2.52
2125 5015 5.240183 CCGATTCATTGCATCTATCTTTGGT 59.760 40.000 0.00 0.00 0.00 3.67
2126 5016 6.238842 CCGATTCATTGCATCTATCTTTGGTT 60.239 38.462 0.00 0.00 0.00 3.67
2128 5018 5.739752 TCATTGCATCTATCTTTGGTTCG 57.260 39.130 0.00 0.00 0.00 3.95
2130 5020 5.647658 TCATTGCATCTATCTTTGGTTCGTT 59.352 36.000 0.00 0.00 0.00 3.85
2132 5022 6.662414 TTGCATCTATCTTTGGTTCGTTAG 57.338 37.500 0.00 0.00 0.00 2.34
2133 5023 5.730550 TGCATCTATCTTTGGTTCGTTAGT 58.269 37.500 0.00 0.00 0.00 2.24
2134 5024 5.580691 TGCATCTATCTTTGGTTCGTTAGTG 59.419 40.000 0.00 0.00 0.00 2.74
2137 5027 6.335471 TCTATCTTTGGTTCGTTAGTGTCA 57.665 37.500 0.00 0.00 0.00 3.58
2138 5028 6.931838 TCTATCTTTGGTTCGTTAGTGTCAT 58.068 36.000 0.00 0.00 0.00 3.06
2139 5029 5.862924 ATCTTTGGTTCGTTAGTGTCATG 57.137 39.130 0.00 0.00 0.00 3.07
2140 5030 3.496884 TCTTTGGTTCGTTAGTGTCATGC 59.503 43.478 0.00 0.00 0.00 4.06
2141 5031 2.535012 TGGTTCGTTAGTGTCATGCA 57.465 45.000 0.00 0.00 0.00 3.96
2142 5032 2.839975 TGGTTCGTTAGTGTCATGCAA 58.160 42.857 0.00 0.00 0.00 4.08
2143 5033 3.407698 TGGTTCGTTAGTGTCATGCAAT 58.592 40.909 0.00 0.00 0.00 3.56
2146 5036 4.158384 GTTCGTTAGTGTCATGCAATTGG 58.842 43.478 7.72 0.00 0.00 3.16
2147 5037 3.407698 TCGTTAGTGTCATGCAATTGGT 58.592 40.909 7.72 0.00 0.00 3.67
2148 5038 3.435327 TCGTTAGTGTCATGCAATTGGTC 59.565 43.478 7.72 0.00 0.00 4.02
2152 5042 4.510038 AGTGTCATGCAATTGGTCTTTC 57.490 40.909 7.72 0.00 0.00 2.62
2154 5044 2.253603 GTCATGCAATTGGTCTTTCGC 58.746 47.619 7.72 0.00 0.00 4.70
2155 5045 2.095059 GTCATGCAATTGGTCTTTCGCT 60.095 45.455 7.72 0.00 0.00 4.93
2156 5046 2.095110 TCATGCAATTGGTCTTTCGCTG 60.095 45.455 7.72 0.00 0.00 5.18
2157 5047 0.597568 TGCAATTGGTCTTTCGCTGG 59.402 50.000 7.72 0.00 0.00 4.85
2158 5048 0.598065 GCAATTGGTCTTTCGCTGGT 59.402 50.000 7.72 0.00 0.00 4.00
2159 5049 1.000274 GCAATTGGTCTTTCGCTGGTT 60.000 47.619 7.72 0.00 0.00 3.67
2160 5050 2.545742 GCAATTGGTCTTTCGCTGGTTT 60.546 45.455 7.72 0.00 0.00 3.27
2161 5051 3.305064 GCAATTGGTCTTTCGCTGGTTTA 60.305 43.478 7.72 0.00 0.00 2.01
2162 5052 4.475944 CAATTGGTCTTTCGCTGGTTTAG 58.524 43.478 0.00 0.00 0.00 1.85
2164 5054 1.271163 TGGTCTTTCGCTGGTTTAGGG 60.271 52.381 0.00 0.00 40.51 3.53
2165 5055 0.803117 GTCTTTCGCTGGTTTAGGGC 59.197 55.000 0.00 0.00 39.10 5.19
2167 5057 1.004277 TCTTTCGCTGGTTTAGGGCAT 59.996 47.619 0.00 0.00 39.10 4.40
2168 5058 1.401905 CTTTCGCTGGTTTAGGGCATC 59.598 52.381 0.00 0.00 39.10 3.91
2169 5059 0.618458 TTCGCTGGTTTAGGGCATCT 59.382 50.000 0.00 0.00 39.10 2.90
2171 5061 0.179000 CGCTGGTTTAGGGCATCTCT 59.821 55.000 0.00 0.00 32.19 3.10
2174 5064 2.808567 GCTGGTTTAGGGCATCTCTAGC 60.809 54.545 0.00 0.00 0.00 3.42
2182 5072 4.671569 CATCTCTAGCCGCGCCCC 62.672 72.222 0.00 0.00 0.00 5.80
2200 5090 4.052518 CAACAGGCCCTCCCCAGG 62.053 72.222 0.00 0.00 39.98 4.45
2201 5091 4.617595 AACAGGCCCTCCCCAGGT 62.618 66.667 0.00 0.00 38.30 4.00
2204 5094 4.044390 AGGCCCTCCCCAGGTGAT 62.044 66.667 0.00 0.00 38.30 3.06
2206 5096 2.626467 GGCCCTCCCCAGGTGATTT 61.626 63.158 0.00 0.00 38.30 2.17
2208 5098 0.629058 GCCCTCCCCAGGTGATTTTA 59.371 55.000 0.00 0.00 38.30 1.52
2209 5099 1.685180 GCCCTCCCCAGGTGATTTTAC 60.685 57.143 0.00 0.00 38.30 2.01
2211 5101 2.357154 CCCTCCCCAGGTGATTTTACTG 60.357 54.545 0.00 0.00 38.30 2.74
2212 5102 2.369394 CTCCCCAGGTGATTTTACTGC 58.631 52.381 0.00 0.00 0.00 4.40
2215 5105 0.451783 CCAGGTGATTTTACTGCGCC 59.548 55.000 4.18 0.00 0.00 6.53
2217 5107 1.024579 AGGTGATTTTACTGCGCCGG 61.025 55.000 4.18 0.00 37.28 6.13
2218 5108 1.226295 GTGATTTTACTGCGCCGGC 60.226 57.895 19.07 19.07 40.52 6.13
2219 5109 2.022762 GATTTTACTGCGCCGGCG 59.977 61.111 43.13 43.13 44.10 6.46
2241 5131 2.983592 AAAAAGGCCCCAGTCGCG 60.984 61.111 0.00 0.00 0.00 5.87
2259 5149 2.117423 CCCCCAGAAGCCCGTTTT 59.883 61.111 0.00 0.00 0.00 2.43
2261 5151 1.532604 CCCCCAGAAGCCCGTTTTTC 61.533 60.000 0.00 0.00 0.00 2.29
2262 5152 1.579429 CCCAGAAGCCCGTTTTTCG 59.421 57.895 0.00 0.00 39.52 3.46
2264 5154 1.081442 CAGAAGCCCGTTTTTCGCC 60.081 57.895 0.00 0.00 38.35 5.54
2265 5155 2.127003 GAAGCCCGTTTTTCGCCG 60.127 61.111 0.00 0.00 38.35 6.46
2266 5156 2.592287 AAGCCCGTTTTTCGCCGA 60.592 55.556 0.00 0.00 38.35 5.54
2267 5157 2.775359 GAAGCCCGTTTTTCGCCGAC 62.775 60.000 0.00 0.00 38.35 4.79
2268 5158 3.351416 GCCCGTTTTTCGCCGACT 61.351 61.111 0.00 0.00 38.35 4.18
2270 5160 2.468532 CCGTTTTTCGCCGACTCG 59.531 61.111 0.00 0.00 38.35 4.18
2280 5170 2.032071 CCGACTCGGGCCAAAACT 59.968 61.111 9.85 0.00 44.15 2.66
2282 5172 2.325082 CGACTCGGGCCAAAACTGG 61.325 63.158 4.39 0.00 0.00 4.00
2283 5173 1.228154 GACTCGGGCCAAAACTGGT 60.228 57.895 4.39 0.00 0.00 4.00
2284 5174 1.515521 GACTCGGGCCAAAACTGGTG 61.516 60.000 4.39 0.00 0.00 4.17
2285 5175 2.909965 TCGGGCCAAAACTGGTGC 60.910 61.111 4.39 0.00 0.00 5.01
2286 5176 3.989787 CGGGCCAAAACTGGTGCC 61.990 66.667 4.39 0.00 43.26 5.01
2287 5177 3.989787 GGGCCAAAACTGGTGCCG 61.990 66.667 4.39 0.00 44.96 5.69
2288 5178 3.989787 GGCCAAAACTGGTGCCGG 61.990 66.667 0.00 0.00 33.59 6.13
2290 5180 4.341502 CCAAAACTGGTGCCGGCG 62.342 66.667 23.90 10.06 0.00 6.46
2291 5181 4.341502 CAAAACTGGTGCCGGCGG 62.342 66.667 24.35 24.35 0.00 6.13
2292 5182 4.572571 AAAACTGGTGCCGGCGGA 62.573 61.111 33.44 12.50 0.00 5.54
2307 5197 4.452733 GGACTCAGGCCGAACCCG 62.453 72.222 0.00 0.00 40.58 5.28
2339 5229 4.659172 CTTGGGGAGCCGGCACAA 62.659 66.667 31.54 24.29 0.00 3.33
2340 5230 4.211330 TTGGGGAGCCGGCACAAA 62.211 61.111 31.54 15.39 0.00 2.83
2347 5237 0.248702 GAGCCGGCACAAACGAAAAA 60.249 50.000 31.54 0.00 0.00 1.94
2348 5238 0.248866 AGCCGGCACAAACGAAAAAG 60.249 50.000 31.54 0.00 0.00 2.27
2349 5239 1.212455 GCCGGCACAAACGAAAAAGG 61.212 55.000 24.80 0.00 0.00 3.11
2351 5241 1.536462 CGGCACAAACGAAAAAGGCG 61.536 55.000 0.00 0.00 38.61 5.52
2355 5245 1.189884 CACAAACGAAAAAGGCGCATG 59.810 47.619 10.83 0.00 0.00 4.06
2357 5247 0.319469 AAACGAAAAAGGCGCATGGG 60.319 50.000 10.83 5.19 0.00 4.00
2358 5248 2.506881 CGAAAAAGGCGCATGGGC 60.507 61.111 25.48 25.48 42.69 5.36
2380 5270 4.101448 CCTGGAGGCAACCCGAGG 62.101 72.222 0.00 0.00 35.76 4.63
2381 5271 4.101448 CTGGAGGCAACCCGAGGG 62.101 72.222 6.63 6.63 42.03 4.30
2387 5277 2.600470 GCAACCCGAGGGCCTTTT 60.600 61.111 7.89 0.00 39.32 2.27
2389 5279 1.964448 CAACCCGAGGGCCTTTTTC 59.036 57.895 7.89 0.00 39.32 2.29
2390 5280 1.228769 AACCCGAGGGCCTTTTTCC 60.229 57.895 7.89 0.00 39.32 3.13
2391 5281 2.750237 CCCGAGGGCCTTTTTCCG 60.750 66.667 7.89 5.97 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.436998 CTCGCCACCAGACCGACC 62.437 72.222 0.00 0.00 0.00 4.79
3 4 4.803426 GAGCTCGCCACCAGACCG 62.803 72.222 0.00 0.00 0.00 4.79
4 5 4.459089 GGAGCTCGCCACCAGACC 62.459 72.222 7.83 0.00 0.00 3.85
5 6 4.803426 CGGAGCTCGCCACCAGAC 62.803 72.222 7.83 0.00 0.00 3.51
8 9 3.449227 CTACGGAGCTCGCCACCA 61.449 66.667 7.83 0.00 43.89 4.17
9 10 3.450115 ACTACGGAGCTCGCCACC 61.450 66.667 7.83 0.00 43.89 4.61
10 11 2.202623 CACTACGGAGCTCGCCAC 60.203 66.667 7.83 0.00 43.89 5.01
13 14 3.827898 AGGCACTACGGAGCTCGC 61.828 66.667 7.83 3.93 43.89 5.03
14 15 2.103143 CAGGCACTACGGAGCTCG 59.897 66.667 7.83 5.83 40.90 5.03
15 16 1.435515 CTCAGGCACTACGGAGCTC 59.564 63.158 4.71 4.71 36.02 4.09
16 17 2.055042 CCTCAGGCACTACGGAGCT 61.055 63.158 0.00 0.00 36.02 4.09
18 19 1.025812 CTACCTCAGGCACTACGGAG 58.974 60.000 0.00 0.00 36.02 4.63
19 20 0.622136 TCTACCTCAGGCACTACGGA 59.378 55.000 0.00 0.00 36.02 4.69
20 21 1.025812 CTCTACCTCAGGCACTACGG 58.974 60.000 0.00 0.00 36.02 4.02
21 22 1.025812 CCTCTACCTCAGGCACTACG 58.974 60.000 0.00 0.00 36.02 3.51
28 29 0.105246 ATCCCAGCCTCTACCTCAGG 60.105 60.000 0.00 0.00 0.00 3.86
32 33 1.152440 CCGATCCCAGCCTCTACCT 60.152 63.158 0.00 0.00 0.00 3.08
33 34 2.210711 CCCGATCCCAGCCTCTACC 61.211 68.421 0.00 0.00 0.00 3.18
34 35 1.152525 TCCCGATCCCAGCCTCTAC 60.153 63.158 0.00 0.00 0.00 2.59
35 36 1.153989 CTCCCGATCCCAGCCTCTA 59.846 63.158 0.00 0.00 0.00 2.43
36 37 2.123077 CTCCCGATCCCAGCCTCT 60.123 66.667 0.00 0.00 0.00 3.69
37 38 1.338136 TTTCTCCCGATCCCAGCCTC 61.338 60.000 0.00 0.00 0.00 4.70
38 39 0.695803 ATTTCTCCCGATCCCAGCCT 60.696 55.000 0.00 0.00 0.00 4.58
39 40 0.250510 GATTTCTCCCGATCCCAGCC 60.251 60.000 0.00 0.00 0.00 4.85
41 42 3.209410 CAAAGATTTCTCCCGATCCCAG 58.791 50.000 0.00 0.00 0.00 4.45
42 43 2.576191 ACAAAGATTTCTCCCGATCCCA 59.424 45.455 0.00 0.00 0.00 4.37
43 44 3.283259 ACAAAGATTTCTCCCGATCCC 57.717 47.619 0.00 0.00 0.00 3.85
45 46 3.181496 GCCAACAAAGATTTCTCCCGATC 60.181 47.826 0.00 0.00 0.00 3.69
46 47 2.755103 GCCAACAAAGATTTCTCCCGAT 59.245 45.455 0.00 0.00 0.00 4.18
47 48 2.159382 GCCAACAAAGATTTCTCCCGA 58.841 47.619 0.00 0.00 0.00 5.14
48 49 2.162681 AGCCAACAAAGATTTCTCCCG 58.837 47.619 0.00 0.00 0.00 5.14
49 50 3.306294 CCAAGCCAACAAAGATTTCTCCC 60.306 47.826 0.00 0.00 0.00 4.30
50 51 3.862264 GCCAAGCCAACAAAGATTTCTCC 60.862 47.826 0.00 0.00 0.00 3.71
51 52 3.320626 GCCAAGCCAACAAAGATTTCTC 58.679 45.455 0.00 0.00 0.00 2.87
52 53 3.391506 GCCAAGCCAACAAAGATTTCT 57.608 42.857 0.00 0.00 0.00 2.52
93 94 2.046507 GTCTGGCAGCACCCTCAG 60.047 66.667 10.34 0.00 37.83 3.35
94 95 3.640407 GGTCTGGCAGCACCCTCA 61.640 66.667 19.36 0.00 37.83 3.86
95 96 2.811542 GAAGGTCTGGCAGCACCCTC 62.812 65.000 23.69 19.16 37.83 4.30
96 97 2.856000 AAGGTCTGGCAGCACCCT 60.856 61.111 23.69 18.58 37.83 4.34
97 98 2.360475 GAAGGTCTGGCAGCACCC 60.360 66.667 23.69 17.03 37.83 4.61
100 101 1.073722 CCAAGAAGGTCTGGCAGCA 59.926 57.895 10.34 0.00 0.00 4.41
101 102 2.338785 GCCAAGAAGGTCTGGCAGC 61.339 63.158 10.34 4.94 39.14 5.25
102 103 2.037136 CGCCAAGAAGGTCTGGCAG 61.037 63.158 8.58 8.58 39.22 4.85
103 104 2.032528 CGCCAAGAAGGTCTGGCA 59.967 61.111 13.14 0.00 39.22 4.92
104 105 2.747855 CCGCCAAGAAGGTCTGGC 60.748 66.667 2.93 2.93 40.61 4.85
105 106 2.045926 CCCGCCAAGAAGGTCTGG 60.046 66.667 0.00 0.00 40.61 3.86
107 108 4.394712 CGCCCGCCAAGAAGGTCT 62.395 66.667 0.00 0.00 40.61 3.85
108 109 4.699522 ACGCCCGCCAAGAAGGTC 62.700 66.667 0.00 0.00 40.61 3.85
109 110 4.699522 GACGCCCGCCAAGAAGGT 62.700 66.667 0.00 0.00 40.61 3.50
128 129 0.761323 GGAGAGAGGAAGGGTAGCCC 60.761 65.000 7.51 0.00 45.90 5.19
129 130 0.263468 AGGAGAGAGGAAGGGTAGCC 59.737 60.000 1.60 1.60 0.00 3.93
130 131 1.699730 GAGGAGAGAGGAAGGGTAGC 58.300 60.000 0.00 0.00 0.00 3.58
133 134 1.380650 GCGAGGAGAGAGGAAGGGT 60.381 63.158 0.00 0.00 0.00 4.34
135 136 2.485795 CGGCGAGGAGAGAGGAAGG 61.486 68.421 0.00 0.00 0.00 3.46
136 137 1.751162 ACGGCGAGGAGAGAGGAAG 60.751 63.158 16.62 0.00 0.00 3.46
137 138 2.046864 CACGGCGAGGAGAGAGGAA 61.047 63.158 16.62 0.00 0.00 3.36
138 139 1.907222 TACACGGCGAGGAGAGAGGA 61.907 60.000 16.62 0.00 0.00 3.71
142 143 2.799371 GGTACACGGCGAGGAGAG 59.201 66.667 16.62 0.00 0.00 3.20
143 144 3.129502 CGGTACACGGCGAGGAGA 61.130 66.667 16.62 0.00 39.42 3.71
162 163 2.203625 TGCTGCCAAGGGTTTCCC 60.204 61.111 0.00 0.00 45.90 3.97
163 164 2.935740 GCTGCTGCCAAGGGTTTCC 61.936 63.158 3.85 0.00 0.00 3.13
165 166 3.297620 CGCTGCTGCCAAGGGTTT 61.298 61.111 10.24 0.00 35.36 3.27
166 167 4.586235 ACGCTGCTGCCAAGGGTT 62.586 61.111 10.24 0.00 35.36 4.11
172 173 4.377708 ATGACGACGCTGCTGCCA 62.378 61.111 10.24 1.97 35.36 4.92
173 174 3.558411 GATGACGACGCTGCTGCC 61.558 66.667 10.24 0.00 35.36 4.85
174 175 3.906649 CGATGACGACGCTGCTGC 61.907 66.667 5.34 5.34 42.66 5.25
175 176 2.500442 GACGATGACGACGCTGCTG 61.500 63.158 0.00 0.00 42.66 4.41
176 177 2.202492 GACGATGACGACGCTGCT 60.202 61.111 0.00 0.00 42.66 4.24
182 183 2.943034 GGACGCGACGATGACGAC 60.943 66.667 15.93 0.00 42.66 4.34
183 184 4.170062 GGGACGCGACGATGACGA 62.170 66.667 15.93 0.00 42.66 4.20
185 186 1.872679 GAAGGGACGCGACGATGAC 60.873 63.158 15.93 0.00 0.00 3.06
188 189 1.153823 CAAGAAGGGACGCGACGAT 60.154 57.895 15.93 0.00 0.00 3.73
189 190 1.798234 TTCAAGAAGGGACGCGACGA 61.798 55.000 15.93 0.00 0.00 4.20
191 192 2.446341 CTTCAAGAAGGGACGCGAC 58.554 57.895 15.93 6.56 34.87 5.19
192 193 4.988065 CTTCAAGAAGGGACGCGA 57.012 55.556 15.93 0.00 34.87 5.87
200 201 3.023832 ACCCAACAACACCTTCAAGAAG 58.976 45.455 2.83 2.83 38.14 2.85
201 202 3.094484 ACCCAACAACACCTTCAAGAA 57.906 42.857 0.00 0.00 0.00 2.52
204 205 2.242708 AGGTACCCAACAACACCTTCAA 59.757 45.455 8.74 0.00 38.23 2.69
205 206 1.847737 AGGTACCCAACAACACCTTCA 59.152 47.619 8.74 0.00 38.23 3.02
206 207 2.227194 CAGGTACCCAACAACACCTTC 58.773 52.381 8.74 0.00 39.40 3.46
207 208 1.752788 GCAGGTACCCAACAACACCTT 60.753 52.381 8.74 0.00 39.40 3.50
208 209 0.179001 GCAGGTACCCAACAACACCT 60.179 55.000 8.74 0.00 42.17 4.00
209 210 0.466555 TGCAGGTACCCAACAACACC 60.467 55.000 8.74 0.00 0.00 4.16
210 211 0.666374 GTGCAGGTACCCAACAACAC 59.334 55.000 8.74 4.64 0.00 3.32
212 213 1.607148 GAAGTGCAGGTACCCAACAAC 59.393 52.381 8.74 0.37 0.00 3.32
213 214 1.812324 CGAAGTGCAGGTACCCAACAA 60.812 52.381 8.74 0.00 0.00 2.83
214 215 0.250124 CGAAGTGCAGGTACCCAACA 60.250 55.000 8.74 1.10 0.00 3.33
215 216 0.034337 TCGAAGTGCAGGTACCCAAC 59.966 55.000 8.74 4.63 0.00 3.77
216 217 0.759959 TTCGAAGTGCAGGTACCCAA 59.240 50.000 8.74 0.00 0.00 4.12
217 218 0.320374 CTTCGAAGTGCAGGTACCCA 59.680 55.000 17.24 0.00 0.00 4.51
218 219 0.320697 ACTTCGAAGTGCAGGTACCC 59.679 55.000 29.24 0.00 37.98 3.69
219 220 1.272769 AGACTTCGAAGTGCAGGTACC 59.727 52.381 34.23 17.10 39.88 3.34
220 221 2.597520 GAGACTTCGAAGTGCAGGTAC 58.402 52.381 34.23 17.81 39.88 3.34
222 223 3.896317 GAGACTTCGAAGTGCAGGT 57.104 52.632 34.23 10.51 39.88 4.00
232 233 0.734253 CACCAAGCTCCGAGACTTCG 60.734 60.000 0.00 0.00 46.29 3.79
235 236 2.286523 CCCACCAAGCTCCGAGACT 61.287 63.158 0.00 0.00 0.00 3.24
236 237 2.266055 CCCACCAAGCTCCGAGAC 59.734 66.667 0.00 0.00 0.00 3.36
239 240 1.899437 GATCACCCACCAAGCTCCGA 61.899 60.000 0.00 0.00 0.00 4.55
240 241 1.450312 GATCACCCACCAAGCTCCG 60.450 63.158 0.00 0.00 0.00 4.63
241 242 0.107459 GAGATCACCCACCAAGCTCC 60.107 60.000 0.00 0.00 0.00 4.70
242 243 0.107459 GGAGATCACCCACCAAGCTC 60.107 60.000 0.00 0.00 0.00 4.09
243 244 1.903877 CGGAGATCACCCACCAAGCT 61.904 60.000 3.35 0.00 0.00 3.74
244 245 1.450312 CGGAGATCACCCACCAAGC 60.450 63.158 3.35 0.00 0.00 4.01
248 249 2.584608 CACCGGAGATCACCCACC 59.415 66.667 9.46 0.00 0.00 4.61
250 251 1.987855 GTCCACCGGAGATCACCCA 60.988 63.158 9.46 0.00 29.39 4.51
251 252 2.901042 GTCCACCGGAGATCACCC 59.099 66.667 9.46 0.00 29.39 4.61
252 253 2.494918 CGTCCACCGGAGATCACC 59.505 66.667 9.46 0.00 29.39 4.02
253 254 2.202756 GCGTCCACCGGAGATCAC 60.203 66.667 9.46 0.00 36.94 3.06
254 255 2.678580 TGCGTCCACCGGAGATCA 60.679 61.111 9.46 4.36 36.94 2.92
270 271 2.811317 GAAGCCTCGTGACCGCTG 60.811 66.667 0.00 0.00 31.92 5.18
280 281 2.031191 TCAACAAAAACGACGAAGCCTC 59.969 45.455 0.00 0.00 0.00 4.70
281 282 2.011222 TCAACAAAAACGACGAAGCCT 58.989 42.857 0.00 0.00 0.00 4.58
284 285 3.215244 CGGATCAACAAAAACGACGAAG 58.785 45.455 0.00 0.00 0.00 3.79
285 286 2.600320 GCGGATCAACAAAAACGACGAA 60.600 45.455 0.00 0.00 0.00 3.85
286 287 1.070443 GCGGATCAACAAAAACGACGA 60.070 47.619 0.00 0.00 0.00 4.20
289 290 0.236187 CGGCGGATCAACAAAAACGA 59.764 50.000 0.00 0.00 0.00 3.85
290 291 0.040781 ACGGCGGATCAACAAAAACG 60.041 50.000 13.24 0.00 0.00 3.60
291 292 2.128367 AACGGCGGATCAACAAAAAC 57.872 45.000 13.24 0.00 0.00 2.43
292 293 3.425094 CGATAACGGCGGATCAACAAAAA 60.425 43.478 13.24 0.00 35.72 1.94
294 295 1.661617 CGATAACGGCGGATCAACAAA 59.338 47.619 13.24 0.00 35.72 2.83
296 297 2.966324 CGATAACGGCGGATCAACA 58.034 52.632 13.24 0.00 35.72 3.33
307 308 5.856455 AGAAAAGAAACAAATGCCGATAACG 59.144 36.000 0.00 0.00 39.43 3.18
308 309 7.637709 AAGAAAAGAAACAAATGCCGATAAC 57.362 32.000 0.00 0.00 0.00 1.89
309 310 8.655651 AAAAGAAAAGAAACAAATGCCGATAA 57.344 26.923 0.00 0.00 0.00 1.75
310 311 8.655651 AAAAAGAAAAGAAACAAATGCCGATA 57.344 26.923 0.00 0.00 0.00 2.92
312 313 6.976636 AAAAAGAAAAGAAACAAATGCCGA 57.023 29.167 0.00 0.00 0.00 5.54
332 333 7.147966 ACGCCTAAAAGAAAGGAAAGAGAAAAA 60.148 33.333 0.00 0.00 36.08 1.94
333 334 6.320418 ACGCCTAAAAGAAAGGAAAGAGAAAA 59.680 34.615 0.00 0.00 36.08 2.29
334 335 5.826208 ACGCCTAAAAGAAAGGAAAGAGAAA 59.174 36.000 0.00 0.00 36.08 2.52
338 339 4.457466 ACACGCCTAAAAGAAAGGAAAGA 58.543 39.130 0.00 0.00 36.08 2.52
339 340 4.830826 ACACGCCTAAAAGAAAGGAAAG 57.169 40.909 0.00 0.00 36.08 2.62
340 341 5.105675 ACAAACACGCCTAAAAGAAAGGAAA 60.106 36.000 0.00 0.00 36.08 3.13
341 342 4.399934 ACAAACACGCCTAAAAGAAAGGAA 59.600 37.500 0.00 0.00 36.08 3.36
342 343 3.949113 ACAAACACGCCTAAAAGAAAGGA 59.051 39.130 0.00 0.00 36.08 3.36
343 344 4.041723 CACAAACACGCCTAAAAGAAAGG 58.958 43.478 0.00 0.00 37.17 3.11
346 347 2.685897 AGCACAAACACGCCTAAAAGAA 59.314 40.909 0.00 0.00 0.00 2.52
347 348 2.032799 CAGCACAAACACGCCTAAAAGA 59.967 45.455 0.00 0.00 0.00 2.52
349 350 1.535015 GCAGCACAAACACGCCTAAAA 60.535 47.619 0.00 0.00 0.00 1.52
350 351 0.030101 GCAGCACAAACACGCCTAAA 59.970 50.000 0.00 0.00 0.00 1.85
353 354 2.063541 GAAGCAGCACAAACACGCCT 62.064 55.000 0.00 0.00 0.00 5.52
354 355 1.658409 GAAGCAGCACAAACACGCC 60.658 57.895 0.00 0.00 0.00 5.68
355 356 1.658409 GGAAGCAGCACAAACACGC 60.658 57.895 0.00 0.00 0.00 5.34
357 358 4.614673 CGGAAGCAGCACAAACAC 57.385 55.556 0.00 0.00 0.00 3.32
370 371 4.835456 ATAGGGGCTGGGGCGGAA 62.835 66.667 0.00 0.00 39.81 4.30
374 375 3.942439 GACGATAGGGGCTGGGGC 61.942 72.222 0.00 0.00 43.77 5.80
375 376 3.616721 CGACGATAGGGGCTGGGG 61.617 72.222 0.00 0.00 43.77 4.96
376 377 3.616721 CCGACGATAGGGGCTGGG 61.617 72.222 0.00 0.00 43.77 4.45
377 378 2.432300 AACCGACGATAGGGGCTGG 61.432 63.158 0.00 0.00 43.77 4.85
378 379 1.227263 CAACCGACGATAGGGGCTG 60.227 63.158 0.00 0.00 43.77 4.85
379 380 0.396139 TACAACCGACGATAGGGGCT 60.396 55.000 0.00 0.00 43.77 5.19
381 382 1.068748 CGATACAACCGACGATAGGGG 60.069 57.143 0.00 0.00 43.77 4.79
382 383 1.068748 CCGATACAACCGACGATAGGG 60.069 57.143 0.00 0.00 43.77 3.53
383 384 1.605710 ACCGATACAACCGACGATAGG 59.394 52.381 0.00 0.00 43.77 2.57
385 386 2.223548 CCAACCGATACAACCGACGATA 60.224 50.000 0.00 0.00 0.00 2.92
386 387 1.470285 CCAACCGATACAACCGACGAT 60.470 52.381 0.00 0.00 0.00 3.73
387 388 0.109179 CCAACCGATACAACCGACGA 60.109 55.000 0.00 0.00 0.00 4.20
391 392 1.515081 ACAACCAACCGATACAACCG 58.485 50.000 0.00 0.00 0.00 4.44
392 393 3.994204 AAACAACCAACCGATACAACC 57.006 42.857 0.00 0.00 0.00 3.77
393 394 4.674475 ACAAAACAACCAACCGATACAAC 58.326 39.130 0.00 0.00 0.00 3.32
394 395 4.985538 ACAAAACAACCAACCGATACAA 57.014 36.364 0.00 0.00 0.00 2.41
395 396 6.636562 ATTACAAAACAACCAACCGATACA 57.363 33.333 0.00 0.00 0.00 2.29
396 397 7.583230 TGTATTACAAAACAACCAACCGATAC 58.417 34.615 0.00 0.00 0.00 2.24
398 399 6.636562 TGTATTACAAAACAACCAACCGAT 57.363 33.333 0.00 0.00 0.00 4.18
399 400 6.446781 TTGTATTACAAAACAACCAACCGA 57.553 33.333 6.79 0.00 34.76 4.69
401 402 6.291902 CGCTTTGTATTACAAAACAACCAACC 60.292 38.462 19.56 3.49 46.15 3.77
403 404 5.749109 CCGCTTTGTATTACAAAACAACCAA 59.251 36.000 19.56 0.00 46.15 3.67
404 405 5.282510 CCGCTTTGTATTACAAAACAACCA 58.717 37.500 19.56 0.28 46.15 3.67
406 407 4.682401 CCCCGCTTTGTATTACAAAACAAC 59.318 41.667 19.56 10.59 46.15 3.32
407 408 4.262079 CCCCCGCTTTGTATTACAAAACAA 60.262 41.667 19.56 1.86 46.15 2.83
408 409 3.256136 CCCCCGCTTTGTATTACAAAACA 59.744 43.478 19.56 2.17 46.15 2.83
409 410 3.506844 TCCCCCGCTTTGTATTACAAAAC 59.493 43.478 19.56 15.27 46.15 2.43
410 411 3.764218 TCCCCCGCTTTGTATTACAAAA 58.236 40.909 19.56 4.07 46.15 2.44
411 412 3.436577 TCCCCCGCTTTGTATTACAAA 57.563 42.857 18.39 18.39 44.91 2.83
413 414 2.618559 GGTTCCCCCGCTTTGTATTACA 60.619 50.000 0.00 0.00 0.00 2.41
414 415 2.019249 GGTTCCCCCGCTTTGTATTAC 58.981 52.381 0.00 0.00 0.00 1.89
415 416 1.064537 GGGTTCCCCCGCTTTGTATTA 60.065 52.381 0.00 0.00 42.41 0.98
416 417 0.323999 GGGTTCCCCCGCTTTGTATT 60.324 55.000 0.00 0.00 42.41 1.89
417 418 1.305287 GGGTTCCCCCGCTTTGTAT 59.695 57.895 0.00 0.00 42.41 2.29
427 428 0.250424 TCGACGAAAAAGGGTTCCCC 60.250 55.000 4.02 0.00 45.90 4.81
428 429 1.596603 TTCGACGAAAAAGGGTTCCC 58.403 50.000 8.05 0.00 0.00 3.97
429 430 3.696281 TTTTCGACGAAAAAGGGTTCC 57.304 42.857 28.39 0.00 38.37 3.62
443 444 8.949953 CGCAGTTTATTTTACTTTCTTTTTCGA 58.050 29.630 0.00 0.00 0.00 3.71
444 445 8.739461 ACGCAGTTTATTTTACTTTCTTTTTCG 58.261 29.630 0.00 0.00 37.78 3.46
448 449 8.843262 AGGTACGCAGTTTATTTTACTTTCTTT 58.157 29.630 0.00 0.00 37.78 2.52
449 450 8.387190 AGGTACGCAGTTTATTTTACTTTCTT 57.613 30.769 0.00 0.00 37.78 2.52
450 451 7.974482 AGGTACGCAGTTTATTTTACTTTCT 57.026 32.000 0.00 0.00 37.78 2.52
460 461 9.997482 CACATTTTATTTAGGTACGCAGTTTAT 57.003 29.630 0.00 0.00 37.78 1.40
461 462 9.001542 ACACATTTTATTTAGGTACGCAGTTTA 57.998 29.630 0.00 0.00 37.78 2.01
462 463 7.878036 ACACATTTTATTTAGGTACGCAGTTT 58.122 30.769 0.00 0.00 37.78 2.66
463 464 7.443259 ACACATTTTATTTAGGTACGCAGTT 57.557 32.000 0.00 0.00 37.78 3.16
466 467 6.037391 GGCTACACATTTTATTTAGGTACGCA 59.963 38.462 0.00 0.00 0.00 5.24
468 469 7.781548 AGGCTACACATTTTATTTAGGTACG 57.218 36.000 0.00 0.00 0.00 3.67
479 480 9.914131 GAAGATTTTTCTTAGGCTACACATTTT 57.086 29.630 0.00 0.00 0.00 1.82
480 481 9.077885 TGAAGATTTTTCTTAGGCTACACATTT 57.922 29.630 0.00 0.00 0.00 2.32
481 482 8.635765 TGAAGATTTTTCTTAGGCTACACATT 57.364 30.769 0.00 0.00 0.00 2.71
482 483 8.814038 ATGAAGATTTTTCTTAGGCTACACAT 57.186 30.769 0.00 0.00 0.00 3.21
483 484 9.733556 TTATGAAGATTTTTCTTAGGCTACACA 57.266 29.630 0.00 0.00 0.00 3.72
494 495 9.455847 GCGAGCATATTTTATGAAGATTTTTCT 57.544 29.630 0.00 0.00 0.00 2.52
495 496 9.455847 AGCGAGCATATTTTATGAAGATTTTTC 57.544 29.630 0.00 0.00 0.00 2.29
501 502 9.935682 CTTTTTAGCGAGCATATTTTATGAAGA 57.064 29.630 0.00 0.00 0.00 2.87
502 503 9.173939 CCTTTTTAGCGAGCATATTTTATGAAG 57.826 33.333 0.00 0.00 0.00 3.02
503 504 8.682710 ACCTTTTTAGCGAGCATATTTTATGAA 58.317 29.630 0.00 0.00 0.00 2.57
505 506 8.345565 AGACCTTTTTAGCGAGCATATTTTATG 58.654 33.333 0.00 0.00 0.00 1.90
506 507 8.345565 CAGACCTTTTTAGCGAGCATATTTTAT 58.654 33.333 0.00 0.00 0.00 1.40
507 508 7.551262 TCAGACCTTTTTAGCGAGCATATTTTA 59.449 33.333 0.00 0.00 0.00 1.52
508 509 6.374333 TCAGACCTTTTTAGCGAGCATATTTT 59.626 34.615 0.00 0.00 0.00 1.82
509 510 5.880332 TCAGACCTTTTTAGCGAGCATATTT 59.120 36.000 0.00 0.00 0.00 1.40
512 513 4.465632 TCAGACCTTTTTAGCGAGCATA 57.534 40.909 0.00 0.00 0.00 3.14
513 514 3.334583 TCAGACCTTTTTAGCGAGCAT 57.665 42.857 0.00 0.00 0.00 3.79
514 515 2.831685 TCAGACCTTTTTAGCGAGCA 57.168 45.000 0.00 0.00 0.00 4.26
516 517 8.237267 ACATTTTATTCAGACCTTTTTAGCGAG 58.763 33.333 0.00 0.00 0.00 5.03
517 518 8.020819 CACATTTTATTCAGACCTTTTTAGCGA 58.979 33.333 0.00 0.00 0.00 4.93
519 520 8.915654 CACACATTTTATTCAGACCTTTTTAGC 58.084 33.333 0.00 0.00 0.00 3.09
521 522 9.959749 GTCACACATTTTATTCAGACCTTTTTA 57.040 29.630 0.00 0.00 0.00 1.52
527 3056 5.705441 TGAGGTCACACATTTTATTCAGACC 59.295 40.000 0.00 0.00 43.44 3.85
528 3057 6.801539 TGAGGTCACACATTTTATTCAGAC 57.198 37.500 0.00 0.00 0.00 3.51
541 3070 1.604278 GTTCAAGCCTTGAGGTCACAC 59.396 52.381 7.29 0.00 41.38 3.82
547 3076 2.276732 TTCCAGTTCAAGCCTTGAGG 57.723 50.000 7.29 6.09 41.38 3.86
551 3080 3.425659 GGAGAATTCCAGTTCAAGCCTT 58.574 45.455 0.65 0.00 43.45 4.35
553 3082 2.095461 GGGAGAATTCCAGTTCAAGCC 58.905 52.381 0.65 0.00 45.98 4.35
555 3084 3.192212 GCAAGGGAGAATTCCAGTTCAAG 59.808 47.826 0.65 0.00 45.98 3.02
563 3092 4.039124 TCTTTGTTTGCAAGGGAGAATTCC 59.961 41.667 0.65 0.00 43.23 3.01
564 3093 5.010012 TCTCTTTGTTTGCAAGGGAGAATTC 59.990 40.000 0.00 0.00 39.65 2.17
566 3095 4.473444 TCTCTTTGTTTGCAAGGGAGAAT 58.527 39.130 0.00 0.00 39.65 2.40
570 3099 5.596361 TGTAAATCTCTTTGTTTGCAAGGGA 59.404 36.000 0.00 0.00 35.82 4.20
577 3106 6.991485 ATTGCGTGTAAATCTCTTTGTTTG 57.009 33.333 0.00 0.00 0.00 2.93
581 3110 8.948853 TTAGAAATTGCGTGTAAATCTCTTTG 57.051 30.769 0.00 0.00 0.00 2.77
611 3140 4.379243 ACTTGGCAGGCGAGTCGG 62.379 66.667 15.52 0.00 0.00 4.79
622 3151 0.031178 CTTCACACTTGGCACTTGGC 59.969 55.000 0.00 0.00 43.74 4.52
624 3153 1.392589 ACCTTCACACTTGGCACTTG 58.607 50.000 0.00 0.00 0.00 3.16
625 3154 1.750778 CAACCTTCACACTTGGCACTT 59.249 47.619 0.00 0.00 0.00 3.16
626 3155 1.340991 ACAACCTTCACACTTGGCACT 60.341 47.619 0.00 0.00 0.00 4.40
627 3156 1.102978 ACAACCTTCACACTTGGCAC 58.897 50.000 0.00 0.00 0.00 5.01
628 3157 1.748493 GAACAACCTTCACACTTGGCA 59.252 47.619 0.00 0.00 0.00 4.92
629 3158 2.024414 AGAACAACCTTCACACTTGGC 58.976 47.619 0.00 0.00 0.00 4.52
630 3159 5.123227 TCTTAGAACAACCTTCACACTTGG 58.877 41.667 0.00 0.00 0.00 3.61
631 3160 6.867662 ATCTTAGAACAACCTTCACACTTG 57.132 37.500 0.00 0.00 0.00 3.16
632 3161 8.429641 TCTAATCTTAGAACAACCTTCACACTT 58.570 33.333 0.00 0.00 36.88 3.16
633 3162 7.963532 TCTAATCTTAGAACAACCTTCACACT 58.036 34.615 0.00 0.00 36.88 3.55
634 3163 8.603242 TTCTAATCTTAGAACAACCTTCACAC 57.397 34.615 8.05 0.00 42.96 3.82
692 3238 3.264947 CCTGATCATTTCTGTTCGAGCA 58.735 45.455 0.88 0.88 0.00 4.26
693 3239 2.031437 GCCTGATCATTTCTGTTCGAGC 59.969 50.000 0.00 0.00 0.00 5.03
695 3241 3.616956 AGCCTGATCATTTCTGTTCGA 57.383 42.857 0.00 0.00 0.00 3.71
696 3242 4.260538 GCTTAGCCTGATCATTTCTGTTCG 60.261 45.833 0.00 0.00 0.00 3.95
701 3247 5.307544 AGATGCTTAGCCTGATCATTTCT 57.692 39.130 0.29 0.00 0.00 2.52
731 3278 3.815133 ATGGCCTCATGATGTGACC 57.185 52.632 3.32 0.00 32.22 4.02
741 3288 1.689243 CGATGACCTCCATGGCCTCA 61.689 60.000 6.96 7.57 40.22 3.86
743 3290 1.690219 GACGATGACCTCCATGGCCT 61.690 60.000 6.96 0.00 40.22 5.19
759 3306 1.520787 GACGGGGTAAGCCATGACG 60.521 63.158 0.00 0.00 36.17 4.35
792 3341 7.079182 TGGTAAGCCACGACTTATAAAATTG 57.921 36.000 0.00 0.00 40.46 2.32
806 3356 1.534729 CCCTTTGACTGGTAAGCCAC 58.465 55.000 0.00 0.00 40.46 5.01
832 3382 0.107214 GGGCAAAGGATCATCGTCCA 60.107 55.000 0.00 0.00 40.90 4.02
837 3398 2.149973 AACTGGGGCAAAGGATCATC 57.850 50.000 0.00 0.00 0.00 2.92
842 3403 0.263172 TGGAAAACTGGGGCAAAGGA 59.737 50.000 0.00 0.00 0.00 3.36
844 3405 1.341209 GACTGGAAAACTGGGGCAAAG 59.659 52.381 0.00 0.00 0.00 2.77
847 3408 0.260230 TTGACTGGAAAACTGGGGCA 59.740 50.000 0.00 0.00 0.00 5.36
886 3451 1.356738 AGGATATATGGGGACGGACGA 59.643 52.381 0.00 0.00 0.00 4.20
905 3470 2.719426 ACGGTGGTCTAAGAACGAAG 57.281 50.000 0.00 0.00 0.00 3.79
909 3474 7.035840 TGAGATAATACGGTGGTCTAAGAAC 57.964 40.000 0.00 0.00 0.00 3.01
911 3476 7.392673 GGTATGAGATAATACGGTGGTCTAAGA 59.607 40.741 0.00 0.00 34.42 2.10
928 3501 3.829601 GCTACAGCCTACAGGTATGAGAT 59.170 47.826 8.93 0.00 37.57 2.75
943 3516 0.033109 AAAGGGGGATTGGCTACAGC 60.033 55.000 0.00 0.00 41.14 4.40
946 3519 0.033109 AGCAAAGGGGGATTGGCTAC 60.033 55.000 0.00 0.00 0.00 3.58
947 3520 0.033208 CAGCAAAGGGGGATTGGCTA 60.033 55.000 0.00 0.00 0.00 3.93
948 3521 1.305549 CAGCAAAGGGGGATTGGCT 60.306 57.895 0.00 0.00 0.00 4.75
949 3522 1.194121 AACAGCAAAGGGGGATTGGC 61.194 55.000 0.00 0.00 0.00 4.52
950 3523 1.276138 GAAACAGCAAAGGGGGATTGG 59.724 52.381 0.00 0.00 0.00 3.16
951 3524 1.969923 TGAAACAGCAAAGGGGGATTG 59.030 47.619 0.00 0.00 0.00 2.67
952 3525 1.970640 GTGAAACAGCAAAGGGGGATT 59.029 47.619 0.00 0.00 36.32 3.01
979 3554 8.302515 ACCATATGAGCTGAAGATTTGAAAAT 57.697 30.769 3.65 0.00 0.00 1.82
1076 3658 2.541547 CTTGGCCGAGCAGGATTCCA 62.542 60.000 7.18 0.00 45.00 3.53
1081 3663 2.217038 ACTTCTTGGCCGAGCAGGA 61.217 57.895 22.01 0.00 45.00 3.86
1206 3797 2.350580 GCGTATAGGGCTCAGTAGAACG 60.351 54.545 0.00 0.00 0.00 3.95
1219 3810 1.154016 CGAGGCCGATGCGTATAGG 60.154 63.158 8.27 8.27 38.85 2.57
1274 3865 1.463056 CTCTATCAACCACGCGCAAAA 59.537 47.619 5.73 0.00 0.00 2.44
1275 3866 1.075542 CTCTATCAACCACGCGCAAA 58.924 50.000 5.73 0.00 0.00 3.68
1280 3871 1.661112 GCTTGTCTCTATCAACCACGC 59.339 52.381 0.00 0.00 0.00 5.34
1303 3894 0.756442 TTGGAGGCTTGCAGCAAGTT 60.756 50.000 31.26 21.71 44.75 2.66
1309 3900 1.602888 AGCTGTTGGAGGCTTGCAG 60.603 57.895 0.00 0.00 34.96 4.41
1314 3908 3.137385 TTGGCAGCTGTTGGAGGCT 62.137 57.895 16.64 0.00 39.60 4.58
1336 3930 4.002797 GGAGGTGTTCCACATGGC 57.997 61.111 0.00 0.00 46.01 4.40
1360 3954 1.265454 ACCTGAACGGGGAGATCCAC 61.265 60.000 0.47 0.00 37.91 4.02
1364 3958 1.196012 GAGAACCTGAACGGGGAGAT 58.804 55.000 4.64 0.00 36.97 2.75
1365 3959 0.903454 GGAGAACCTGAACGGGGAGA 60.903 60.000 4.64 0.00 36.97 3.71
1370 3969 2.669240 GGGGGAGAACCTGAACGG 59.331 66.667 0.00 0.00 40.03 4.44
1371 3970 2.108278 AACGGGGGAGAACCTGAACG 62.108 60.000 0.00 0.00 39.34 3.95
1379 3978 1.348696 GTTCAGGTTAACGGGGGAGAA 59.651 52.381 0.00 0.00 0.00 2.87
1382 3981 0.474273 AGGTTCAGGTTAACGGGGGA 60.474 55.000 0.00 0.00 0.00 4.81
1390 3989 3.580895 TGTACAGCATGAGGTTCAGGTTA 59.419 43.478 0.00 0.00 39.69 2.85
1405 4004 0.447801 CCTCCGTGCAATTGTACAGC 59.552 55.000 23.74 2.71 0.00 4.40
1467 4069 2.725008 CCGCTCTCATCCTCGTCC 59.275 66.667 0.00 0.00 0.00 4.79
1502 4117 4.632974 GCCCATCCTAGCGCCCTG 62.633 72.222 2.29 0.00 0.00 4.45
1512 4127 2.525877 TACCCGCTAGGCCCATCC 60.526 66.667 0.00 0.00 40.58 3.51
1519 4134 3.912907 CCTGCCGTACCCGCTAGG 61.913 72.222 0.00 3.43 43.78 3.02
1521 4136 1.152694 ATACCTGCCGTACCCGCTA 60.153 57.895 1.68 0.00 0.00 4.26
1534 4149 0.038744 AAGCCTTGCACAGCATACCT 59.961 50.000 9.65 0.00 38.76 3.08
1536 4151 0.097674 CGAAGCCTTGCACAGCATAC 59.902 55.000 9.65 0.44 38.76 2.39
1539 4154 2.203195 ACGAAGCCTTGCACAGCA 60.203 55.556 9.65 0.00 36.47 4.41
1543 4158 3.044305 AGCGACGAAGCCTTGCAC 61.044 61.111 0.00 0.00 38.01 4.57
1546 4161 2.740055 AGCAGCGACGAAGCCTTG 60.740 61.111 0.00 0.00 38.01 3.61
1563 4178 2.672651 CCAATCACCGGCACAGCA 60.673 61.111 0.00 0.00 0.00 4.41
1565 4180 3.443045 GCCCAATCACCGGCACAG 61.443 66.667 0.00 0.00 45.01 3.66
1605 4220 4.824166 TAGTCGCTCGCGTTCGCC 62.824 66.667 5.77 0.23 40.74 5.54
1606 4221 3.595759 GTAGTCGCTCGCGTTCGC 61.596 66.667 5.77 7.14 40.74 4.70
1639 4254 2.086869 CCACGTCATGAAGAAGCCATT 58.913 47.619 15.90 0.00 0.00 3.16
1648 4263 1.339631 GGTTGGATCCCACGTCATGAA 60.340 52.381 9.90 0.00 30.78 2.57
1651 4266 1.607612 GGGTTGGATCCCACGTCAT 59.392 57.895 9.90 0.00 46.30 3.06
1662 4277 2.014010 ACTTACGTGTAGGGGTTGGA 57.986 50.000 0.00 0.00 0.00 3.53
1664 4279 3.062042 GTGAACTTACGTGTAGGGGTTG 58.938 50.000 0.00 0.00 0.00 3.77
1665 4280 2.967887 AGTGAACTTACGTGTAGGGGTT 59.032 45.455 0.00 0.00 0.00 4.11
1666 4281 2.560105 GAGTGAACTTACGTGTAGGGGT 59.440 50.000 0.00 0.00 0.00 4.95
1686 4307 5.642063 GTGGATTAAAGACAGGATTTGACGA 59.358 40.000 0.00 0.00 0.00 4.20
1696 4319 3.691609 GGCAGGAAGTGGATTAAAGACAG 59.308 47.826 0.00 0.00 0.00 3.51
1698 4321 3.956744 AGGCAGGAAGTGGATTAAAGAC 58.043 45.455 0.00 0.00 0.00 3.01
1717 4340 4.769488 TGATAGCTTGGTCAGATAGCTAGG 59.231 45.833 13.89 0.00 46.99 3.02
1726 4349 4.823442 TGCCATTATTGATAGCTTGGTCAG 59.177 41.667 0.00 0.00 0.00 3.51
1727 4350 4.580167 GTGCCATTATTGATAGCTTGGTCA 59.420 41.667 0.00 0.00 0.00 4.02
1732 4393 5.688807 AGTGAGTGCCATTATTGATAGCTT 58.311 37.500 0.00 0.00 0.00 3.74
1768 4429 1.134907 CCATTACGACCAGCCTAACGT 60.135 52.381 0.00 0.00 41.66 3.99
1769 4430 1.134907 ACCATTACGACCAGCCTAACG 60.135 52.381 0.00 0.00 0.00 3.18
1770 4431 2.685850 ACCATTACGACCAGCCTAAC 57.314 50.000 0.00 0.00 0.00 2.34
1771 4432 3.770933 ACTTACCATTACGACCAGCCTAA 59.229 43.478 0.00 0.00 0.00 2.69
1772 4433 3.368248 ACTTACCATTACGACCAGCCTA 58.632 45.455 0.00 0.00 0.00 3.93
1787 4448 9.517868 ACATGATACTAGTCTATGGTACTTACC 57.482 37.037 0.00 0.00 46.62 2.85
1864 4754 6.767423 TGCTACTATGTGTTATGCATGACAAT 59.233 34.615 24.17 19.84 0.00 2.71
1869 4759 8.086851 TGTTATGCTACTATGTGTTATGCATG 57.913 34.615 10.16 0.00 38.39 4.06
1921 4811 6.287589 TGAAGAAAGAGAGGGTTGAGTATC 57.712 41.667 0.00 0.00 0.00 2.24
1924 4814 5.574970 AATGAAGAAAGAGAGGGTTGAGT 57.425 39.130 0.00 0.00 0.00 3.41
1925 4815 7.986085 TTAAATGAAGAAAGAGAGGGTTGAG 57.014 36.000 0.00 0.00 0.00 3.02
1926 4816 8.940397 AATTAAATGAAGAAAGAGAGGGTTGA 57.060 30.769 0.00 0.00 0.00 3.18
1927 4817 9.987272 AAAATTAAATGAAGAAAGAGAGGGTTG 57.013 29.630 0.00 0.00 0.00 3.77
1952 4842 8.474831 CGTAATGGGATATCATAGGTGACATAA 58.525 37.037 4.83 0.00 37.14 1.90
1953 4843 7.837187 TCGTAATGGGATATCATAGGTGACATA 59.163 37.037 4.83 0.00 37.14 2.29
1954 4844 6.667848 TCGTAATGGGATATCATAGGTGACAT 59.332 38.462 4.83 0.00 37.14 3.06
1956 4846 6.331061 GTCGTAATGGGATATCATAGGTGAC 58.669 44.000 4.83 0.85 37.14 3.67
1957 4847 5.421056 GGTCGTAATGGGATATCATAGGTGA 59.579 44.000 4.83 0.00 39.04 4.02
1958 4848 5.186992 TGGTCGTAATGGGATATCATAGGTG 59.813 44.000 4.83 0.00 0.00 4.00
1959 4849 5.338632 TGGTCGTAATGGGATATCATAGGT 58.661 41.667 4.83 0.00 0.00 3.08
1960 4850 5.682471 GCTGGTCGTAATGGGATATCATAGG 60.682 48.000 4.83 0.00 0.00 2.57
1961 4851 5.352284 GCTGGTCGTAATGGGATATCATAG 58.648 45.833 4.83 0.00 0.00 2.23
1962 4852 4.161565 GGCTGGTCGTAATGGGATATCATA 59.838 45.833 4.83 0.00 0.00 2.15
1963 4853 3.055094 GGCTGGTCGTAATGGGATATCAT 60.055 47.826 4.83 0.00 0.00 2.45
1965 4855 2.567615 AGGCTGGTCGTAATGGGATATC 59.432 50.000 0.00 0.00 0.00 1.63
1966 4856 2.621070 AGGCTGGTCGTAATGGGATAT 58.379 47.619 0.00 0.00 0.00 1.63
1967 4857 2.097110 AGGCTGGTCGTAATGGGATA 57.903 50.000 0.00 0.00 0.00 2.59
1968 4858 1.213296 AAGGCTGGTCGTAATGGGAT 58.787 50.000 0.00 0.00 0.00 3.85
1969 4859 1.760613 CTAAGGCTGGTCGTAATGGGA 59.239 52.381 0.00 0.00 0.00 4.37
1970 4860 1.810412 GCTAAGGCTGGTCGTAATGGG 60.810 57.143 0.00 0.00 35.22 4.00
1971 4861 1.583054 GCTAAGGCTGGTCGTAATGG 58.417 55.000 0.00 0.00 35.22 3.16
1972 4862 1.583054 GGCTAAGGCTGGTCGTAATG 58.417 55.000 0.00 0.00 38.73 1.90
1973 4863 0.104304 CGGCTAAGGCTGGTCGTAAT 59.896 55.000 6.58 0.00 40.90 1.89
1974 4864 1.514087 CGGCTAAGGCTGGTCGTAA 59.486 57.895 6.58 0.00 40.90 3.18
1976 4866 4.452733 GCGGCTAAGGCTGGTCGT 62.453 66.667 14.33 0.00 44.48 4.34
1977 4867 4.451150 TGCGGCTAAGGCTGGTCG 62.451 66.667 9.79 9.79 44.48 4.79
1978 4868 2.512515 CTGCGGCTAAGGCTGGTC 60.513 66.667 0.00 0.00 44.48 4.02
1979 4869 4.785453 GCTGCGGCTAAGGCTGGT 62.785 66.667 11.21 0.00 44.48 4.00
2013 4903 1.715993 GAAGAGGAAGGTCGAGTTGC 58.284 55.000 0.00 0.00 0.00 4.17
2019 4909 2.184579 GGCCGAAGAGGAAGGTCG 59.815 66.667 0.00 0.00 45.00 4.79
2020 4910 1.219393 CTGGCCGAAGAGGAAGGTC 59.781 63.158 0.00 0.00 45.00 3.85
2024 4914 2.646175 CGTCCTGGCCGAAGAGGAA 61.646 63.158 11.02 0.00 45.00 3.36
2028 4918 1.303888 ACTACGTCCTGGCCGAAGA 60.304 57.895 3.30 0.00 0.00 2.87
2029 4919 1.153823 CACTACGTCCTGGCCGAAG 60.154 63.158 3.30 0.00 0.00 3.79
2030 4920 2.967397 CACTACGTCCTGGCCGAA 59.033 61.111 3.30 0.00 0.00 4.30
2046 4936 1.078497 CTATGGTCAAGTGGGCGCA 60.078 57.895 10.83 0.00 0.00 6.09
2047 4937 2.472909 GCTATGGTCAAGTGGGCGC 61.473 63.158 0.00 0.00 0.00 6.53
2048 4938 1.819632 GGCTATGGTCAAGTGGGCG 60.820 63.158 0.00 0.00 0.00 6.13
2050 4940 0.107017 CCAGGCTATGGTCAAGTGGG 60.107 60.000 0.00 0.00 44.91 4.61
2059 4949 3.012518 GCATATGCTAACCAGGCTATGG 58.987 50.000 20.64 6.92 46.12 2.74
2073 4963 9.745323 GAAAATCAAGTTAAAACAAGCATATGC 57.255 29.630 20.36 20.36 42.49 3.14
2076 4966 9.691362 GGAGAAAATCAAGTTAAAACAAGCATA 57.309 29.630 0.00 0.00 0.00 3.14
2078 4968 6.695278 CGGAGAAAATCAAGTTAAAACAAGCA 59.305 34.615 0.00 0.00 0.00 3.91
2079 4969 6.915843 TCGGAGAAAATCAAGTTAAAACAAGC 59.084 34.615 0.00 0.00 0.00 4.01
2080 4970 9.463443 AATCGGAGAAAATCAAGTTAAAACAAG 57.537 29.630 0.00 0.00 43.58 3.16
2081 4971 9.458374 GAATCGGAGAAAATCAAGTTAAAACAA 57.542 29.630 0.00 0.00 43.58 2.83
2082 4972 8.625651 TGAATCGGAGAAAATCAAGTTAAAACA 58.374 29.630 0.00 0.00 43.58 2.83
2083 4973 9.626045 ATGAATCGGAGAAAATCAAGTTAAAAC 57.374 29.630 0.00 0.00 43.58 2.43
2086 4976 7.754924 GCAATGAATCGGAGAAAATCAAGTTAA 59.245 33.333 0.00 0.00 43.58 2.01
2087 4977 7.094420 TGCAATGAATCGGAGAAAATCAAGTTA 60.094 33.333 0.00 0.00 43.58 2.24
2090 4980 5.643664 TGCAATGAATCGGAGAAAATCAAG 58.356 37.500 0.00 0.00 43.58 3.02
2091 4981 5.641783 TGCAATGAATCGGAGAAAATCAA 57.358 34.783 0.00 0.00 43.58 2.57
2092 4982 5.591472 AGATGCAATGAATCGGAGAAAATCA 59.409 36.000 0.00 0.00 43.58 2.57
2093 4983 6.069684 AGATGCAATGAATCGGAGAAAATC 57.930 37.500 0.00 0.00 43.58 2.17
2094 4984 7.664731 AGATAGATGCAATGAATCGGAGAAAAT 59.335 33.333 0.00 0.00 43.58 1.82
2095 4985 6.994496 AGATAGATGCAATGAATCGGAGAAAA 59.006 34.615 0.00 0.00 43.58 2.29
2096 4986 6.528321 AGATAGATGCAATGAATCGGAGAAA 58.472 36.000 0.00 0.00 43.58 2.52
2097 4987 6.106648 AGATAGATGCAATGAATCGGAGAA 57.893 37.500 0.00 0.00 43.58 2.87
2098 4988 5.735285 AGATAGATGCAATGAATCGGAGA 57.265 39.130 0.00 0.00 45.75 3.71
2099 4989 6.348295 CCAAAGATAGATGCAATGAATCGGAG 60.348 42.308 0.00 0.00 0.00 4.63
2100 4990 5.471116 CCAAAGATAGATGCAATGAATCGGA 59.529 40.000 0.00 0.00 0.00 4.55
2101 4991 5.240183 ACCAAAGATAGATGCAATGAATCGG 59.760 40.000 0.00 0.00 0.00 4.18
2102 4992 6.309712 ACCAAAGATAGATGCAATGAATCG 57.690 37.500 0.00 0.00 0.00 3.34
2103 4993 6.854892 CGAACCAAAGATAGATGCAATGAATC 59.145 38.462 0.00 0.00 0.00 2.52
2104 4994 6.319658 ACGAACCAAAGATAGATGCAATGAAT 59.680 34.615 0.00 0.00 0.00 2.57
2105 4995 5.647658 ACGAACCAAAGATAGATGCAATGAA 59.352 36.000 0.00 0.00 0.00 2.57
2106 4996 5.185454 ACGAACCAAAGATAGATGCAATGA 58.815 37.500 0.00 0.00 0.00 2.57
2108 4998 6.823689 ACTAACGAACCAAAGATAGATGCAAT 59.176 34.615 0.00 0.00 0.00 3.56
2109 4999 6.092122 CACTAACGAACCAAAGATAGATGCAA 59.908 38.462 0.00 0.00 0.00 4.08
2110 5000 5.580691 CACTAACGAACCAAAGATAGATGCA 59.419 40.000 0.00 0.00 0.00 3.96
2112 5002 6.811665 TGACACTAACGAACCAAAGATAGATG 59.188 38.462 0.00 0.00 0.00 2.90
2114 5004 6.335471 TGACACTAACGAACCAAAGATAGA 57.665 37.500 0.00 0.00 0.00 1.98
2115 5005 6.455646 GCATGACACTAACGAACCAAAGATAG 60.456 42.308 0.00 0.00 0.00 2.08
2117 5007 4.154195 GCATGACACTAACGAACCAAAGAT 59.846 41.667 0.00 0.00 0.00 2.40
2118 5008 3.496884 GCATGACACTAACGAACCAAAGA 59.503 43.478 0.00 0.00 0.00 2.52
2119 5009 3.249799 TGCATGACACTAACGAACCAAAG 59.750 43.478 0.00 0.00 0.00 2.77
2120 5010 3.206964 TGCATGACACTAACGAACCAAA 58.793 40.909 0.00 0.00 0.00 3.28
2121 5011 2.839975 TGCATGACACTAACGAACCAA 58.160 42.857 0.00 0.00 0.00 3.67
2122 5012 2.535012 TGCATGACACTAACGAACCA 57.465 45.000 0.00 0.00 0.00 3.67
2125 5015 3.818210 ACCAATTGCATGACACTAACGAA 59.182 39.130 0.00 0.00 0.00 3.85
2126 5016 3.407698 ACCAATTGCATGACACTAACGA 58.592 40.909 0.00 0.00 0.00 3.85
2128 5018 5.376854 AAGACCAATTGCATGACACTAAC 57.623 39.130 0.00 0.00 0.00 2.34
2130 5020 4.154015 CGAAAGACCAATTGCATGACACTA 59.846 41.667 0.00 0.00 0.00 2.74
2132 5022 3.236816 CGAAAGACCAATTGCATGACAC 58.763 45.455 0.00 0.00 0.00 3.67
2133 5023 2.351641 GCGAAAGACCAATTGCATGACA 60.352 45.455 0.00 0.00 0.00 3.58
2134 5024 2.095059 AGCGAAAGACCAATTGCATGAC 60.095 45.455 0.00 0.00 0.00 3.06
2137 5027 1.203052 CCAGCGAAAGACCAATTGCAT 59.797 47.619 0.00 0.00 0.00 3.96
2138 5028 0.597568 CCAGCGAAAGACCAATTGCA 59.402 50.000 0.00 0.00 0.00 4.08
2139 5029 0.598065 ACCAGCGAAAGACCAATTGC 59.402 50.000 0.00 0.00 0.00 3.56
2140 5030 3.369546 AAACCAGCGAAAGACCAATTG 57.630 42.857 0.00 0.00 0.00 2.32
2141 5031 3.506067 CCTAAACCAGCGAAAGACCAATT 59.494 43.478 0.00 0.00 0.00 2.32
2142 5032 3.081804 CCTAAACCAGCGAAAGACCAAT 58.918 45.455 0.00 0.00 0.00 3.16
2143 5033 2.500229 CCTAAACCAGCGAAAGACCAA 58.500 47.619 0.00 0.00 0.00 3.67
2146 5036 0.803117 GCCCTAAACCAGCGAAAGAC 59.197 55.000 0.00 0.00 0.00 3.01
2147 5037 0.398696 TGCCCTAAACCAGCGAAAGA 59.601 50.000 0.00 0.00 0.00 2.52
2148 5038 1.401905 GATGCCCTAAACCAGCGAAAG 59.598 52.381 0.00 0.00 0.00 2.62
2152 5042 0.179000 AGAGATGCCCTAAACCAGCG 59.821 55.000 0.00 0.00 0.00 5.18
2154 5044 2.224402 GGCTAGAGATGCCCTAAACCAG 60.224 54.545 0.00 0.00 44.32 4.00
2155 5045 1.768870 GGCTAGAGATGCCCTAAACCA 59.231 52.381 0.00 0.00 44.32 3.67
2156 5046 2.552599 GGCTAGAGATGCCCTAAACC 57.447 55.000 0.00 0.00 44.32 3.27
2165 5055 4.671569 GGGGCGCGGCTAGAGATG 62.672 72.222 32.30 0.00 0.00 2.90
2182 5072 4.052518 CTGGGGAGGGCCTGTTGG 62.053 72.222 12.95 0.00 0.00 3.77
2184 5074 4.617595 ACCTGGGGAGGGCCTGTT 62.618 66.667 12.95 0.00 0.00 3.16
2187 5077 3.603330 AATCACCTGGGGAGGGCCT 62.603 63.158 5.25 5.25 0.00 5.19
2188 5078 2.168272 AAAATCACCTGGGGAGGGCC 62.168 60.000 4.33 0.00 0.00 5.80
2189 5079 0.629058 TAAAATCACCTGGGGAGGGC 59.371 55.000 4.33 0.00 0.00 5.19
2193 5083 1.339631 CGCAGTAAAATCACCTGGGGA 60.340 52.381 0.00 0.00 36.02 4.81
2195 5085 0.451783 GCGCAGTAAAATCACCTGGG 59.548 55.000 0.30 0.00 40.82 4.45
2196 5086 0.451783 GGCGCAGTAAAATCACCTGG 59.548 55.000 10.83 0.00 0.00 4.45
2197 5087 0.096976 CGGCGCAGTAAAATCACCTG 59.903 55.000 10.83 0.00 0.00 4.00
2198 5088 1.024579 CCGGCGCAGTAAAATCACCT 61.025 55.000 10.83 0.00 0.00 4.00
2200 5090 1.226295 GCCGGCGCAGTAAAATCAC 60.226 57.895 12.58 0.00 34.03 3.06
2201 5091 2.745785 CGCCGGCGCAGTAAAATCA 61.746 57.895 38.48 0.00 34.03 2.57
2241 5131 4.678743 AAACGGGCTTCTGGGGGC 62.679 66.667 0.00 0.00 0.00 5.80
2242 5132 1.532604 GAAAAACGGGCTTCTGGGGG 61.533 60.000 0.00 0.00 0.00 5.40
2243 5133 1.862602 CGAAAAACGGGCTTCTGGGG 61.863 60.000 0.00 0.00 38.46 4.96
2244 5134 1.579429 CGAAAAACGGGCTTCTGGG 59.421 57.895 0.00 0.00 38.46 4.45
2247 5137 2.613506 CGGCGAAAAACGGGCTTCT 61.614 57.895 0.00 0.00 42.83 2.85
2248 5138 2.127003 CGGCGAAAAACGGGCTTC 60.127 61.111 0.00 0.00 42.83 3.86
2249 5139 2.592287 TCGGCGAAAAACGGGCTT 60.592 55.556 7.35 0.00 42.83 4.35
2250 5140 3.351416 GTCGGCGAAAAACGGGCT 61.351 61.111 12.92 0.00 42.83 5.19
2255 5145 2.858158 CCCGAGTCGGCGAAAAAC 59.142 61.111 26.60 0.00 46.86 2.43
2256 5146 3.045492 GCCCGAGTCGGCGAAAAA 61.045 61.111 26.60 0.00 46.86 1.94
2262 5152 3.733960 GTTTTGGCCCGAGTCGGC 61.734 66.667 26.60 20.06 46.86 5.54
2264 5154 2.325082 CCAGTTTTGGCCCGAGTCG 61.325 63.158 5.29 5.29 37.73 4.18
2265 5155 3.668386 CCAGTTTTGGCCCGAGTC 58.332 61.111 0.00 0.00 37.73 3.36
2274 5164 4.341502 CCGCCGGCACCAGTTTTG 62.342 66.667 28.98 6.19 0.00 2.44
2290 5180 4.452733 CGGGTTCGGCCTGAGTCC 62.453 72.222 0.00 6.74 46.81 3.85
2324 5214 4.966787 GTTTGTGCCGGCTCCCCA 62.967 66.667 29.70 15.84 0.00 4.96
2327 5217 2.065906 TTTTCGTTTGTGCCGGCTCC 62.066 55.000 29.70 18.65 0.00 4.70
2328 5218 0.248702 TTTTTCGTTTGTGCCGGCTC 60.249 50.000 29.70 25.38 0.00 4.70
2330 5220 1.212455 CCTTTTTCGTTTGTGCCGGC 61.212 55.000 22.73 22.73 0.00 6.13
2331 5221 1.212455 GCCTTTTTCGTTTGTGCCGG 61.212 55.000 0.00 0.00 0.00 6.13
2332 5222 1.536462 CGCCTTTTTCGTTTGTGCCG 61.536 55.000 0.00 0.00 0.00 5.69
2333 5223 1.817217 GCGCCTTTTTCGTTTGTGCC 61.817 55.000 0.00 0.00 0.00 5.01
2334 5224 1.142778 TGCGCCTTTTTCGTTTGTGC 61.143 50.000 4.18 0.00 0.00 4.57
2335 5225 1.189884 CATGCGCCTTTTTCGTTTGTG 59.810 47.619 4.18 0.00 0.00 3.33
2336 5226 1.486439 CATGCGCCTTTTTCGTTTGT 58.514 45.000 4.18 0.00 0.00 2.83
2337 5227 0.783579 CCATGCGCCTTTTTCGTTTG 59.216 50.000 4.18 0.00 0.00 2.93
2338 5228 0.319469 CCCATGCGCCTTTTTCGTTT 60.319 50.000 4.18 0.00 0.00 3.60
2339 5229 1.288752 CCCATGCGCCTTTTTCGTT 59.711 52.632 4.18 0.00 0.00 3.85
2340 5230 2.961768 CCCATGCGCCTTTTTCGT 59.038 55.556 4.18 0.00 0.00 3.85
2342 5232 2.125552 GGCCCATGCGCCTTTTTC 60.126 61.111 14.37 0.00 46.10 2.29
2362 5252 4.101448 CTCGGGTTGCCTCCAGGG 62.101 72.222 0.00 0.00 35.18 4.45
2363 5253 4.101448 CCTCGGGTTGCCTCCAGG 62.101 72.222 0.00 0.00 38.53 4.45
2364 5254 4.101448 CCCTCGGGTTGCCTCCAG 62.101 72.222 0.00 0.00 0.00 3.86
2369 5259 4.678743 AAAGGCCCTCGGGTTGCC 62.679 66.667 0.00 4.95 45.70 4.52
2370 5260 2.154798 GAAAAAGGCCCTCGGGTTGC 62.155 60.000 0.00 0.00 37.65 4.17
2372 5262 1.228769 GGAAAAAGGCCCTCGGGTT 60.229 57.895 0.00 0.00 37.65 4.11
2373 5263 2.439245 GGAAAAAGGCCCTCGGGT 59.561 61.111 0.00 0.00 37.65 5.28
2374 5264 2.750237 CGGAAAAAGGCCCTCGGG 60.750 66.667 0.00 0.00 38.57 5.14
2375 5265 3.440415 GCGGAAAAAGGCCCTCGG 61.440 66.667 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.