Multiple sequence alignment - TraesCS3A01G043100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G043100 chr3A 100.000 4902 0 0 1 4902 23391849 23396750 0.000000e+00 9053
1 TraesCS3A01G043100 chr3D 88.320 4529 252 112 398 4836 13585802 13581461 0.000000e+00 5177
2 TraesCS3A01G043100 chr3D 89.474 95 10 0 1 95 587748794 587748888 2.400000e-23 121
3 TraesCS3A01G043100 chr3D 87.500 96 12 0 1 96 194110047 194109952 1.440000e-20 111
4 TraesCS3A01G043100 chr3B 86.579 4575 289 158 404 4836 19873431 19869040 0.000000e+00 4747
5 TraesCS3A01G043100 chr4D 87.755 98 12 0 1 98 344366977 344367074 1.120000e-21 115
6 TraesCS3A01G043100 chr2B 88.421 95 11 0 2 96 210463881 210463787 1.120000e-21 115
7 TraesCS3A01G043100 chr2B 86.598 97 13 0 1 97 723434327 723434231 1.870000e-19 108
8 TraesCS3A01G043100 chr6D 86.598 97 13 0 1 97 449134010 449134106 1.870000e-19 108
9 TraesCS3A01G043100 chr4A 87.368 95 11 1 1 95 682031819 682031912 1.870000e-19 108
10 TraesCS3A01G043100 chr2D 86.598 97 13 0 1 97 138294485 138294389 1.870000e-19 108
11 TraesCS3A01G043100 chr5D 85.294 102 13 2 1 102 320452568 320452667 2.410000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G043100 chr3A 23391849 23396750 4901 False 9053 9053 100.000 1 4902 1 chr3A.!!$F1 4901
1 TraesCS3A01G043100 chr3D 13581461 13585802 4341 True 5177 5177 88.320 398 4836 1 chr3D.!!$R1 4438
2 TraesCS3A01G043100 chr3B 19869040 19873431 4391 True 4747 4747 86.579 404 4836 1 chr3B.!!$R1 4432

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 131 0.027324 GTAGACGACGGCGGAAGTAG 59.973 60.0 18.49 0.0 43.17 2.57 F
302 303 0.030101 GAGGAACGAGATCGAGCAGG 59.970 60.0 9.58 0.0 43.02 4.85 F
874 937 0.038166 TCCTTAGCCAAAGCCACCAG 59.962 55.0 0.00 0.0 41.25 4.00 F
2045 2150 0.108424 CAACGAAGCAGAGGAGGAGG 60.108 60.0 0.00 0.0 0.00 4.30 F
2046 2151 0.251832 AACGAAGCAGAGGAGGAGGA 60.252 55.0 0.00 0.0 0.00 3.71 F
3586 3754 0.321653 AACAAGGCCGTGAGTGATCC 60.322 55.0 26.25 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2009 2114 0.037326 TTGCCTCTCTGCAACCGTAG 60.037 55.000 0.00 0.00 45.77 3.51 R
2103 2208 1.074850 CTTCTCCTCCTCCTCCCCC 60.075 68.421 0.00 0.00 0.00 5.40 R
2104 2209 1.074850 CCTTCTCCTCCTCCTCCCC 60.075 68.421 0.00 0.00 0.00 4.81 R
3643 3838 1.754226 AGACGGCTCTTCTTCTGATCC 59.246 52.381 0.00 0.00 0.00 3.36 R
3661 3858 1.984570 CCGGCTCAGGTCCTTGAGA 60.985 63.158 17.62 0.83 45.95 3.27 R
4865 5121 0.034198 TCTGCGTCCATCCAAACGAA 59.966 50.000 0.00 0.00 41.29 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.449635 TTGTCGGGGAGATGAATAAAATTG 57.550 37.500 0.00 0.00 0.00 2.32
24 25 5.750524 TGTCGGGGAGATGAATAAAATTGA 58.249 37.500 0.00 0.00 0.00 2.57
25 26 6.184068 TGTCGGGGAGATGAATAAAATTGAA 58.816 36.000 0.00 0.00 0.00 2.69
26 27 6.833416 TGTCGGGGAGATGAATAAAATTGAAT 59.167 34.615 0.00 0.00 0.00 2.57
27 28 7.141363 GTCGGGGAGATGAATAAAATTGAATG 58.859 38.462 0.00 0.00 0.00 2.67
28 29 6.833416 TCGGGGAGATGAATAAAATTGAATGT 59.167 34.615 0.00 0.00 0.00 2.71
29 30 7.996066 TCGGGGAGATGAATAAAATTGAATGTA 59.004 33.333 0.00 0.00 0.00 2.29
30 31 8.796475 CGGGGAGATGAATAAAATTGAATGTAT 58.204 33.333 0.00 0.00 0.00 2.29
70 71 9.088512 ACGTCTAGATACATTCATTTCTTCAAC 57.911 33.333 0.00 0.00 0.00 3.18
71 72 9.087424 CGTCTAGATACATTCATTTCTTCAACA 57.913 33.333 0.00 0.00 0.00 3.33
84 85 9.528018 TCATTTCTTCAACAAGTATTTTTGGAC 57.472 29.630 0.00 0.00 32.32 4.02
85 86 9.311916 CATTTCTTCAACAAGTATTTTTGGACA 57.688 29.630 0.00 0.00 32.32 4.02
86 87 8.925161 TTTCTTCAACAAGTATTTTTGGACAG 57.075 30.769 0.00 0.00 32.32 3.51
87 88 7.873719 TCTTCAACAAGTATTTTTGGACAGA 57.126 32.000 0.00 0.00 32.32 3.41
88 89 8.287439 TCTTCAACAAGTATTTTTGGACAGAA 57.713 30.769 0.00 0.00 32.32 3.02
89 90 8.405531 TCTTCAACAAGTATTTTTGGACAGAAG 58.594 33.333 0.00 0.00 32.82 2.85
90 91 7.038154 TCAACAAGTATTTTTGGACAGAAGG 57.962 36.000 0.00 0.00 32.32 3.46
91 92 6.831353 TCAACAAGTATTTTTGGACAGAAGGA 59.169 34.615 0.00 0.00 32.32 3.36
92 93 6.884280 ACAAGTATTTTTGGACAGAAGGAG 57.116 37.500 0.00 0.00 32.32 3.69
93 94 6.365520 ACAAGTATTTTTGGACAGAAGGAGT 58.634 36.000 0.00 0.00 32.32 3.85
94 95 7.514721 ACAAGTATTTTTGGACAGAAGGAGTA 58.485 34.615 0.00 0.00 32.32 2.59
95 96 7.444487 ACAAGTATTTTTGGACAGAAGGAGTAC 59.556 37.037 0.00 0.00 32.32 2.73
96 97 7.317722 AGTATTTTTGGACAGAAGGAGTACT 57.682 36.000 0.00 0.00 0.00 2.73
97 98 8.431910 AGTATTTTTGGACAGAAGGAGTACTA 57.568 34.615 0.00 0.00 0.00 1.82
98 99 8.312564 AGTATTTTTGGACAGAAGGAGTACTAC 58.687 37.037 0.00 0.00 0.00 2.73
99 100 5.479124 TTTTGGACAGAAGGAGTACTACC 57.521 43.478 0.00 2.33 0.00 3.18
100 101 3.820195 TGGACAGAAGGAGTACTACCA 57.180 47.619 0.00 0.00 0.00 3.25
101 102 4.122337 TGGACAGAAGGAGTACTACCAA 57.878 45.455 0.00 0.00 0.00 3.67
102 103 4.485875 TGGACAGAAGGAGTACTACCAAA 58.514 43.478 0.00 0.00 0.00 3.28
103 104 4.282703 TGGACAGAAGGAGTACTACCAAAC 59.717 45.833 0.00 0.00 0.00 2.93
104 105 4.483311 GACAGAAGGAGTACTACCAAACG 58.517 47.826 0.00 0.00 0.00 3.60
105 106 3.257624 ACAGAAGGAGTACTACCAAACGG 59.742 47.826 0.00 0.00 0.00 4.44
106 107 2.233186 AGAAGGAGTACTACCAAACGGC 59.767 50.000 0.00 0.00 0.00 5.68
107 108 1.934410 AGGAGTACTACCAAACGGCT 58.066 50.000 0.00 0.00 0.00 5.52
108 109 3.091633 AGGAGTACTACCAAACGGCTA 57.908 47.619 0.00 0.00 0.00 3.93
109 110 2.757314 AGGAGTACTACCAAACGGCTAC 59.243 50.000 0.00 0.00 0.00 3.58
110 111 2.159184 GGAGTACTACCAAACGGCTACC 60.159 54.545 0.00 0.00 0.00 3.18
128 129 2.873288 GTAGACGACGGCGGAAGT 59.127 61.111 18.49 7.97 43.17 3.01
129 130 2.089854 GTAGACGACGGCGGAAGTA 58.910 57.895 18.49 0.00 43.17 2.24
130 131 0.027324 GTAGACGACGGCGGAAGTAG 59.973 60.000 18.49 0.00 43.17 2.57
131 132 0.108186 TAGACGACGGCGGAAGTAGA 60.108 55.000 18.49 0.00 43.17 2.59
132 133 1.226239 GACGACGGCGGAAGTAGAC 60.226 63.158 18.49 0.00 43.17 2.59
133 134 1.915614 GACGACGGCGGAAGTAGACA 61.916 60.000 18.49 0.00 43.17 3.41
134 135 1.513586 CGACGGCGGAAGTAGACAC 60.514 63.158 13.24 0.00 0.00 3.67
135 136 1.153881 GACGGCGGAAGTAGACACC 60.154 63.158 13.24 0.00 0.00 4.16
136 137 1.593296 GACGGCGGAAGTAGACACCT 61.593 60.000 13.24 0.00 0.00 4.00
137 138 0.322816 ACGGCGGAAGTAGACACCTA 60.323 55.000 13.24 0.00 0.00 3.08
138 139 0.813184 CGGCGGAAGTAGACACCTAA 59.187 55.000 0.00 0.00 0.00 2.69
139 140 1.202268 CGGCGGAAGTAGACACCTAAG 60.202 57.143 0.00 0.00 0.00 2.18
140 141 1.471153 GGCGGAAGTAGACACCTAAGC 60.471 57.143 0.00 0.00 0.00 3.09
141 142 1.203994 GCGGAAGTAGACACCTAAGCA 59.796 52.381 0.00 0.00 0.00 3.91
142 143 2.353406 GCGGAAGTAGACACCTAAGCAA 60.353 50.000 0.00 0.00 0.00 3.91
143 144 3.251571 CGGAAGTAGACACCTAAGCAAC 58.748 50.000 0.00 0.00 0.00 4.17
144 145 3.597255 GGAAGTAGACACCTAAGCAACC 58.403 50.000 0.00 0.00 0.00 3.77
145 146 3.251571 GAAGTAGACACCTAAGCAACCG 58.748 50.000 0.00 0.00 0.00 4.44
146 147 1.067071 AGTAGACACCTAAGCAACCGC 60.067 52.381 0.00 0.00 38.99 5.68
147 148 0.248289 TAGACACCTAAGCAACCGCC 59.752 55.000 0.00 0.00 39.83 6.13
148 149 1.302192 GACACCTAAGCAACCGCCA 60.302 57.895 0.00 0.00 39.83 5.69
149 150 0.887387 GACACCTAAGCAACCGCCAA 60.887 55.000 0.00 0.00 39.83 4.52
150 151 0.466555 ACACCTAAGCAACCGCCAAA 60.467 50.000 0.00 0.00 39.83 3.28
151 152 0.671251 CACCTAAGCAACCGCCAAAA 59.329 50.000 0.00 0.00 39.83 2.44
152 153 0.671796 ACCTAAGCAACCGCCAAAAC 59.328 50.000 0.00 0.00 39.83 2.43
153 154 0.386731 CCTAAGCAACCGCCAAAACG 60.387 55.000 0.00 0.00 39.83 3.60
177 178 2.269241 CGAAGGGTCTTGGGAGGC 59.731 66.667 0.00 0.00 0.00 4.70
183 184 3.090765 GTCTTGGGAGGCCACCAT 58.909 61.111 21.72 0.00 37.93 3.55
184 185 1.384191 GTCTTGGGAGGCCACCATT 59.616 57.895 21.72 0.00 37.93 3.16
185 186 0.967380 GTCTTGGGAGGCCACCATTG 60.967 60.000 21.72 15.41 37.93 2.82
200 201 4.990257 CACCATTGGATTCTTACAAGCAG 58.010 43.478 10.37 0.00 0.00 4.24
201 202 4.019174 ACCATTGGATTCTTACAAGCAGG 58.981 43.478 10.37 0.00 0.00 4.85
202 203 3.181483 CCATTGGATTCTTACAAGCAGGC 60.181 47.826 0.00 0.00 0.00 4.85
203 204 2.128771 TGGATTCTTACAAGCAGGCC 57.871 50.000 0.00 0.00 0.00 5.19
204 205 1.017387 GGATTCTTACAAGCAGGCCG 58.983 55.000 0.00 0.00 0.00 6.13
205 206 1.406887 GGATTCTTACAAGCAGGCCGA 60.407 52.381 0.00 0.00 0.00 5.54
206 207 2.356135 GATTCTTACAAGCAGGCCGAA 58.644 47.619 0.00 0.00 0.00 4.30
207 208 1.808411 TTCTTACAAGCAGGCCGAAG 58.192 50.000 0.00 0.00 0.00 3.79
208 209 0.685097 TCTTACAAGCAGGCCGAAGT 59.315 50.000 0.00 0.00 0.00 3.01
209 210 1.079503 CTTACAAGCAGGCCGAAGTC 58.920 55.000 0.00 0.00 0.00 3.01
210 211 0.685097 TTACAAGCAGGCCGAAGTCT 59.315 50.000 0.00 0.00 0.00 3.24
211 212 0.246635 TACAAGCAGGCCGAAGTCTC 59.753 55.000 0.00 0.00 0.00 3.36
212 213 2.097038 CAAGCAGGCCGAAGTCTCG 61.097 63.158 0.00 0.00 45.02 4.04
221 222 3.518017 CGAAGTCTCGGATCAGTCG 57.482 57.895 0.00 0.00 41.57 4.18
222 223 0.590230 CGAAGTCTCGGATCAGTCGC 60.590 60.000 0.00 0.00 41.57 5.19
223 224 0.248702 GAAGTCTCGGATCAGTCGCC 60.249 60.000 0.00 0.00 0.00 5.54
224 225 1.668101 AAGTCTCGGATCAGTCGCCC 61.668 60.000 0.00 0.00 0.00 6.13
225 226 2.833582 TCTCGGATCAGTCGCCCC 60.834 66.667 0.00 0.00 0.00 5.80
226 227 3.147595 CTCGGATCAGTCGCCCCA 61.148 66.667 0.00 0.00 0.00 4.96
227 228 3.432051 CTCGGATCAGTCGCCCCAC 62.432 68.421 0.00 0.00 0.00 4.61
228 229 3.770040 CGGATCAGTCGCCCCACA 61.770 66.667 0.00 0.00 0.00 4.17
229 230 2.125106 GGATCAGTCGCCCCACAC 60.125 66.667 0.00 0.00 0.00 3.82
230 231 2.662596 GATCAGTCGCCCCACACA 59.337 61.111 0.00 0.00 0.00 3.72
231 232 1.741770 GATCAGTCGCCCCACACAC 60.742 63.158 0.00 0.00 0.00 3.82
232 233 3.254024 ATCAGTCGCCCCACACACC 62.254 63.158 0.00 0.00 0.00 4.16
233 234 4.248842 CAGTCGCCCCACACACCA 62.249 66.667 0.00 0.00 0.00 4.17
234 235 3.249189 AGTCGCCCCACACACCAT 61.249 61.111 0.00 0.00 0.00 3.55
235 236 3.055719 GTCGCCCCACACACCATG 61.056 66.667 0.00 0.00 0.00 3.66
238 239 4.684134 GCCCCACACACCATGCCT 62.684 66.667 0.00 0.00 0.00 4.75
239 240 2.361610 CCCCACACACCATGCCTC 60.362 66.667 0.00 0.00 0.00 4.70
240 241 2.361610 CCCACACACCATGCCTCC 60.362 66.667 0.00 0.00 0.00 4.30
241 242 2.435663 CCACACACCATGCCTCCA 59.564 61.111 0.00 0.00 0.00 3.86
242 243 1.676635 CCACACACCATGCCTCCAG 60.677 63.158 0.00 0.00 0.00 3.86
243 244 1.073722 CACACACCATGCCTCCAGT 59.926 57.895 0.00 0.00 0.00 4.00
244 245 0.957395 CACACACCATGCCTCCAGTC 60.957 60.000 0.00 0.00 0.00 3.51
245 246 1.130054 ACACACCATGCCTCCAGTCT 61.130 55.000 0.00 0.00 0.00 3.24
246 247 0.392193 CACACCATGCCTCCAGTCTC 60.392 60.000 0.00 0.00 0.00 3.36
247 248 1.222936 CACCATGCCTCCAGTCTCC 59.777 63.158 0.00 0.00 0.00 3.71
248 249 1.229625 ACCATGCCTCCAGTCTCCA 60.230 57.895 0.00 0.00 0.00 3.86
249 250 1.270414 ACCATGCCTCCAGTCTCCAG 61.270 60.000 0.00 0.00 0.00 3.86
250 251 0.979709 CCATGCCTCCAGTCTCCAGA 60.980 60.000 0.00 0.00 0.00 3.86
251 252 0.464870 CATGCCTCCAGTCTCCAGAG 59.535 60.000 0.00 0.00 0.00 3.35
262 263 2.043852 TCCAGAGGAGAGGCGGAC 60.044 66.667 0.00 0.00 0.00 4.79
263 264 2.363018 CCAGAGGAGAGGCGGACA 60.363 66.667 0.00 0.00 0.00 4.02
264 265 2.716017 CCAGAGGAGAGGCGGACAC 61.716 68.421 0.00 0.00 0.00 3.67
265 266 1.979155 CAGAGGAGAGGCGGACACA 60.979 63.158 0.00 0.00 0.00 3.72
266 267 1.228894 AGAGGAGAGGCGGACACAA 60.229 57.895 0.00 0.00 0.00 3.33
267 268 1.216710 GAGGAGAGGCGGACACAAG 59.783 63.158 0.00 0.00 0.00 3.16
268 269 2.232298 GAGGAGAGGCGGACACAAGG 62.232 65.000 0.00 0.00 0.00 3.61
269 270 2.266055 GAGAGGCGGACACAAGGG 59.734 66.667 0.00 0.00 0.00 3.95
270 271 3.959991 GAGAGGCGGACACAAGGGC 62.960 68.421 0.00 0.00 0.00 5.19
289 290 3.479269 CGCGGCAGAACGAGGAAC 61.479 66.667 0.00 0.00 35.47 3.62
291 292 2.257371 CGGCAGAACGAGGAACGA 59.743 61.111 0.00 0.00 45.77 3.85
292 293 1.801913 CGGCAGAACGAGGAACGAG 60.802 63.158 0.00 0.00 45.77 4.18
293 294 1.585006 GGCAGAACGAGGAACGAGA 59.415 57.895 0.00 0.00 45.77 4.04
294 295 0.173708 GGCAGAACGAGGAACGAGAT 59.826 55.000 0.00 0.00 45.77 2.75
295 296 1.551145 GCAGAACGAGGAACGAGATC 58.449 55.000 0.00 0.00 45.77 2.75
296 297 1.816370 CAGAACGAGGAACGAGATCG 58.184 55.000 0.00 0.00 45.77 3.69
297 298 1.397343 CAGAACGAGGAACGAGATCGA 59.603 52.381 9.58 0.00 45.77 3.59
298 299 1.666700 AGAACGAGGAACGAGATCGAG 59.333 52.381 9.58 0.00 45.77 4.04
299 300 0.099082 AACGAGGAACGAGATCGAGC 59.901 55.000 9.58 0.00 45.77 5.03
300 301 1.025113 ACGAGGAACGAGATCGAGCA 61.025 55.000 9.58 0.00 45.77 4.26
301 302 0.316607 CGAGGAACGAGATCGAGCAG 60.317 60.000 9.58 0.00 45.77 4.24
302 303 0.030101 GAGGAACGAGATCGAGCAGG 59.970 60.000 9.58 0.00 43.02 4.85
303 304 0.394488 AGGAACGAGATCGAGCAGGA 60.394 55.000 9.58 0.00 43.02 3.86
304 305 0.456221 GGAACGAGATCGAGCAGGAA 59.544 55.000 9.58 0.00 43.02 3.36
305 306 1.535015 GGAACGAGATCGAGCAGGAAG 60.535 57.143 9.58 0.00 43.02 3.46
306 307 0.457851 AACGAGATCGAGCAGGAAGG 59.542 55.000 9.58 0.00 43.02 3.46
307 308 1.299773 CGAGATCGAGCAGGAAGGC 60.300 63.158 2.38 0.00 43.02 4.35
308 309 1.299773 GAGATCGAGCAGGAAGGCG 60.300 63.158 2.38 0.00 39.27 5.52
309 310 2.279784 GATCGAGCAGGAAGGCGG 60.280 66.667 0.00 0.00 39.27 6.13
310 311 3.077556 ATCGAGCAGGAAGGCGGT 61.078 61.111 0.00 0.00 39.27 5.68
311 312 2.579684 GATCGAGCAGGAAGGCGGTT 62.580 60.000 0.00 0.00 39.27 4.44
312 313 2.185310 ATCGAGCAGGAAGGCGGTTT 62.185 55.000 0.00 0.00 39.27 3.27
313 314 1.966451 CGAGCAGGAAGGCGGTTTT 60.966 57.895 0.00 0.00 39.27 2.43
314 315 1.876664 GAGCAGGAAGGCGGTTTTC 59.123 57.895 0.00 0.00 39.27 2.29
315 316 1.587043 GAGCAGGAAGGCGGTTTTCC 61.587 60.000 4.99 4.99 43.59 3.13
316 317 1.901464 GCAGGAAGGCGGTTTTCCA 60.901 57.895 12.86 0.00 45.28 3.53
317 318 1.460273 GCAGGAAGGCGGTTTTCCAA 61.460 55.000 12.86 0.00 45.28 3.53
318 319 0.313987 CAGGAAGGCGGTTTTCCAAC 59.686 55.000 12.86 0.00 45.28 3.77
319 320 1.170290 AGGAAGGCGGTTTTCCAACG 61.170 55.000 12.86 0.00 45.28 4.10
320 321 1.449726 GGAAGGCGGTTTTCCAACGT 61.450 55.000 7.49 0.00 42.93 3.99
321 322 1.228533 GAAGGCGGTTTTCCAACGTA 58.771 50.000 0.00 0.00 40.70 3.57
322 323 0.946528 AAGGCGGTTTTCCAACGTAC 59.053 50.000 0.00 0.00 40.70 3.67
323 324 1.204813 GGCGGTTTTCCAACGTACG 59.795 57.895 15.01 15.01 40.70 3.67
324 325 1.204813 GCGGTTTTCCAACGTACGG 59.795 57.895 21.06 2.00 40.70 4.02
325 326 1.220817 GCGGTTTTCCAACGTACGGA 61.221 55.000 21.06 4.26 40.70 4.69
326 327 1.431496 CGGTTTTCCAACGTACGGAT 58.569 50.000 21.06 4.99 40.70 4.18
327 328 2.605030 CGGTTTTCCAACGTACGGATA 58.395 47.619 21.06 0.00 40.70 2.59
328 329 2.599973 CGGTTTTCCAACGTACGGATAG 59.400 50.000 21.06 5.38 40.70 2.08
329 330 2.349580 GGTTTTCCAACGTACGGATAGC 59.650 50.000 21.06 4.71 40.31 2.97
330 331 3.256558 GTTTTCCAACGTACGGATAGCT 58.743 45.455 21.06 0.00 30.99 3.32
331 332 3.598019 TTTCCAACGTACGGATAGCTT 57.402 42.857 21.06 0.00 30.99 3.74
332 333 4.717233 TTTCCAACGTACGGATAGCTTA 57.283 40.909 21.06 0.00 30.99 3.09
333 334 3.976793 TCCAACGTACGGATAGCTTAG 57.023 47.619 21.06 0.00 0.00 2.18
334 335 2.033801 TCCAACGTACGGATAGCTTAGC 59.966 50.000 21.06 0.00 0.00 3.09
335 336 2.391879 CAACGTACGGATAGCTTAGCC 58.608 52.381 21.06 0.00 0.00 3.93
336 337 0.957362 ACGTACGGATAGCTTAGCCC 59.043 55.000 21.06 0.00 0.00 5.19
337 338 0.243095 CGTACGGATAGCTTAGCCCC 59.757 60.000 7.57 0.00 0.00 5.80
338 339 1.630223 GTACGGATAGCTTAGCCCCT 58.370 55.000 0.00 0.00 0.00 4.79
339 340 1.272769 GTACGGATAGCTTAGCCCCTG 59.727 57.143 0.00 0.00 0.00 4.45
340 341 1.122019 ACGGATAGCTTAGCCCCTGG 61.122 60.000 0.00 0.00 0.00 4.45
341 342 1.122019 CGGATAGCTTAGCCCCTGGT 61.122 60.000 0.00 0.00 0.00 4.00
342 343 0.687920 GGATAGCTTAGCCCCTGGTC 59.312 60.000 0.00 0.00 0.00 4.02
343 344 1.424638 GATAGCTTAGCCCCTGGTCA 58.575 55.000 0.00 0.00 0.00 4.02
344 345 1.070914 GATAGCTTAGCCCCTGGTCAC 59.929 57.143 0.00 0.00 0.00 3.67
345 346 1.327690 TAGCTTAGCCCCTGGTCACG 61.328 60.000 0.00 0.00 0.00 4.35
346 347 2.656069 GCTTAGCCCCTGGTCACGA 61.656 63.158 0.00 0.00 0.00 4.35
347 348 1.980052 CTTAGCCCCTGGTCACGAA 59.020 57.895 0.00 0.00 0.00 3.85
348 349 0.391263 CTTAGCCCCTGGTCACGAAC 60.391 60.000 0.00 0.00 0.00 3.95
349 350 2.162338 TTAGCCCCTGGTCACGAACG 62.162 60.000 0.00 0.00 0.00 3.95
350 351 4.309950 GCCCCTGGTCACGAACGT 62.310 66.667 0.00 0.00 0.00 3.99
351 352 2.357034 CCCCTGGTCACGAACGTG 60.357 66.667 19.22 19.22 46.64 4.49
352 353 3.041940 CCCTGGTCACGAACGTGC 61.042 66.667 20.24 15.17 45.04 5.34
353 354 2.279851 CCTGGTCACGAACGTGCA 60.280 61.111 20.24 13.18 45.04 4.57
354 355 1.667830 CCTGGTCACGAACGTGCAT 60.668 57.895 20.24 0.00 45.04 3.96
355 356 1.626654 CCTGGTCACGAACGTGCATC 61.627 60.000 20.24 13.12 45.04 3.91
356 357 0.667487 CTGGTCACGAACGTGCATCT 60.667 55.000 20.24 0.00 45.04 2.90
357 358 0.599060 TGGTCACGAACGTGCATCTA 59.401 50.000 20.24 9.71 45.04 1.98
358 359 1.000052 TGGTCACGAACGTGCATCTAA 60.000 47.619 20.24 1.75 45.04 2.10
359 360 1.389106 GGTCACGAACGTGCATCTAAC 59.611 52.381 20.24 12.63 45.04 2.34
360 361 2.055838 GTCACGAACGTGCATCTAACA 58.944 47.619 20.24 0.39 45.04 2.41
361 362 2.473609 GTCACGAACGTGCATCTAACAA 59.526 45.455 20.24 0.00 45.04 2.83
362 363 2.729360 TCACGAACGTGCATCTAACAAG 59.271 45.455 20.24 0.00 45.04 3.16
363 364 2.475111 CACGAACGTGCATCTAACAAGT 59.525 45.455 14.04 0.00 39.39 3.16
364 365 2.475111 ACGAACGTGCATCTAACAAGTG 59.525 45.455 0.00 0.00 30.00 3.16
365 366 2.721797 CGAACGTGCATCTAACAAGTGC 60.722 50.000 0.00 0.00 39.26 4.40
366 367 2.169832 ACGTGCATCTAACAAGTGCT 57.830 45.000 0.00 0.00 39.52 4.40
367 368 1.800586 ACGTGCATCTAACAAGTGCTG 59.199 47.619 0.00 0.00 39.52 4.41
368 369 1.464687 CGTGCATCTAACAAGTGCTGC 60.465 52.381 0.00 0.00 39.52 5.25
369 370 1.808945 GTGCATCTAACAAGTGCTGCT 59.191 47.619 0.00 0.00 39.52 4.24
370 371 3.002791 GTGCATCTAACAAGTGCTGCTA 58.997 45.455 0.00 0.00 39.52 3.49
371 372 3.002791 TGCATCTAACAAGTGCTGCTAC 58.997 45.455 0.00 0.00 39.52 3.58
372 373 3.002791 GCATCTAACAAGTGCTGCTACA 58.997 45.455 0.00 0.00 36.02 2.74
373 374 3.436704 GCATCTAACAAGTGCTGCTACAA 59.563 43.478 0.00 0.00 36.02 2.41
374 375 4.436584 GCATCTAACAAGTGCTGCTACAAG 60.437 45.833 0.00 0.00 36.02 3.16
375 376 4.336889 TCTAACAAGTGCTGCTACAAGT 57.663 40.909 0.00 0.00 0.00 3.16
376 377 5.462530 TCTAACAAGTGCTGCTACAAGTA 57.537 39.130 0.00 0.00 0.00 2.24
377 378 5.227908 TCTAACAAGTGCTGCTACAAGTAC 58.772 41.667 0.00 0.00 33.41 2.73
378 379 2.767505 ACAAGTGCTGCTACAAGTACC 58.232 47.619 0.00 0.00 33.68 3.34
379 380 2.104111 ACAAGTGCTGCTACAAGTACCA 59.896 45.455 0.00 0.00 33.68 3.25
380 381 2.457366 AGTGCTGCTACAAGTACCAC 57.543 50.000 0.00 0.00 33.68 4.16
381 382 1.691976 AGTGCTGCTACAAGTACCACA 59.308 47.619 0.00 0.00 33.68 4.17
382 383 2.104111 AGTGCTGCTACAAGTACCACAA 59.896 45.455 0.00 0.00 33.68 3.33
383 384 2.223377 GTGCTGCTACAAGTACCACAAC 59.777 50.000 0.00 0.00 0.00 3.32
384 385 2.158885 TGCTGCTACAAGTACCACAACA 60.159 45.455 0.00 0.00 0.00 3.33
385 386 2.875933 GCTGCTACAAGTACCACAACAA 59.124 45.455 0.00 0.00 0.00 2.83
386 387 3.314080 GCTGCTACAAGTACCACAACAAA 59.686 43.478 0.00 0.00 0.00 2.83
387 388 4.554723 GCTGCTACAAGTACCACAACAAAG 60.555 45.833 0.00 0.00 0.00 2.77
388 389 3.314080 TGCTACAAGTACCACAACAAAGC 59.686 43.478 0.00 0.00 0.00 3.51
389 390 3.606153 GCTACAAGTACCACAACAAAGCG 60.606 47.826 0.00 0.00 0.00 4.68
390 391 1.673920 ACAAGTACCACAACAAAGCGG 59.326 47.619 0.00 0.00 0.00 5.52
391 392 1.001815 CAAGTACCACAACAAAGCGGG 60.002 52.381 0.00 0.00 0.00 6.13
392 393 1.170290 AGTACCACAACAAAGCGGGC 61.170 55.000 0.00 0.00 0.00 6.13
393 394 1.149627 TACCACAACAAAGCGGGCT 59.850 52.632 0.00 0.00 0.00 5.19
394 395 0.397187 TACCACAACAAAGCGGGCTA 59.603 50.000 0.00 0.00 0.00 3.93
395 396 0.889186 ACCACAACAAAGCGGGCTAG 60.889 55.000 0.00 0.00 0.00 3.42
396 397 1.210155 CACAACAAAGCGGGCTAGC 59.790 57.895 6.04 6.04 37.41 3.42
512 544 3.315949 CCTCCGACGTCCCCCAAA 61.316 66.667 10.58 0.00 0.00 3.28
540 578 0.995728 GTTTACTGCTCAGCTCTCGC 59.004 55.000 0.00 0.00 0.00 5.03
541 579 0.108615 TTTACTGCTCAGCTCTCGCC 60.109 55.000 0.00 0.00 36.60 5.54
542 580 0.967887 TTACTGCTCAGCTCTCGCCT 60.968 55.000 0.00 0.00 36.60 5.52
543 581 1.380403 TACTGCTCAGCTCTCGCCTC 61.380 60.000 0.00 0.00 36.60 4.70
544 582 3.754740 CTGCTCAGCTCTCGCCTCG 62.755 68.421 0.00 0.00 36.60 4.63
545 583 4.567385 GCTCAGCTCTCGCCTCGG 62.567 72.222 0.00 0.00 36.60 4.63
546 584 4.567385 CTCAGCTCTCGCCTCGGC 62.567 72.222 0.00 0.00 36.60 5.54
557 595 4.554363 CCTCGGCGCCTGTCGTAG 62.554 72.222 26.68 6.92 45.30 3.51
595 633 4.261801 GGAGATTACTTGCTTGCTAACCA 58.738 43.478 0.00 0.00 0.00 3.67
641 684 5.977489 TCTCTTTTCTAGATCACGTTGGA 57.023 39.130 0.00 0.00 30.92 3.53
688 731 9.339850 CCCATGATATGATATGAAAATCTCTCC 57.660 37.037 0.00 0.00 0.00 3.71
689 732 9.043079 CCATGATATGATATGAAAATCTCTCCG 57.957 37.037 0.00 0.00 0.00 4.63
702 747 0.179045 CTCTCCGCCACCTTTATGGG 60.179 60.000 0.00 0.00 40.43 4.00
704 749 2.833121 CCGCCACCTTTATGGGCC 60.833 66.667 0.00 0.00 44.90 5.80
726 784 2.613390 CCGGGCTATAAACTTCGGC 58.387 57.895 0.00 0.00 0.00 5.54
729 787 1.865340 CGGGCTATAAACTTCGGCTTC 59.135 52.381 0.00 0.00 0.00 3.86
744 802 1.821136 GGCTTCTCCCAAACCATCTTG 59.179 52.381 0.00 0.00 0.00 3.02
761 819 2.026822 TCTTGGCTTTGATCTCTCCACC 60.027 50.000 0.00 0.00 0.00 4.61
762 820 1.661463 TGGCTTTGATCTCTCCACCT 58.339 50.000 0.00 0.00 0.00 4.00
763 821 2.832838 TGGCTTTGATCTCTCCACCTA 58.167 47.619 0.00 0.00 0.00 3.08
764 822 2.768527 TGGCTTTGATCTCTCCACCTAG 59.231 50.000 0.00 0.00 0.00 3.02
765 823 2.484594 GGCTTTGATCTCTCCACCTAGC 60.485 54.545 0.00 0.00 0.00 3.42
767 825 2.550277 TTGATCTCTCCACCTAGCCA 57.450 50.000 0.00 0.00 0.00 4.75
768 826 2.783379 TGATCTCTCCACCTAGCCAT 57.217 50.000 0.00 0.00 0.00 4.40
769 827 2.603021 TGATCTCTCCACCTAGCCATC 58.397 52.381 0.00 0.00 0.00 3.51
770 828 2.178764 TGATCTCTCCACCTAGCCATCT 59.821 50.000 0.00 0.00 0.00 2.90
771 829 2.373335 TCTCTCCACCTAGCCATCTC 57.627 55.000 0.00 0.00 0.00 2.75
772 830 1.133325 TCTCTCCACCTAGCCATCTCC 60.133 57.143 0.00 0.00 0.00 3.71
773 831 0.105453 TCTCCACCTAGCCATCTCCC 60.105 60.000 0.00 0.00 0.00 4.30
774 832 0.399091 CTCCACCTAGCCATCTCCCA 60.399 60.000 0.00 0.00 0.00 4.37
775 833 0.691078 TCCACCTAGCCATCTCCCAC 60.691 60.000 0.00 0.00 0.00 4.61
776 834 0.982852 CCACCTAGCCATCTCCCACA 60.983 60.000 0.00 0.00 0.00 4.17
802 860 2.317371 TCCTCTCTCTGGAGCAAAGT 57.683 50.000 0.00 0.00 39.31 2.66
803 861 1.898472 TCCTCTCTCTGGAGCAAAGTG 59.102 52.381 0.00 0.00 39.31 3.16
804 862 1.675415 CCTCTCTCTGGAGCAAAGTGC 60.675 57.143 0.00 0.00 45.46 4.40
835 893 4.371417 CCAGTGGGTGCCTGCCAT 62.371 66.667 0.00 0.00 0.00 4.40
860 923 2.490168 GGTTGGTTGGCTTCCTTCCTTA 60.490 50.000 0.00 0.00 0.00 2.69
862 925 1.271926 TGGTTGGCTTCCTTCCTTAGC 60.272 52.381 0.00 0.00 0.00 3.09
868 931 1.474478 GCTTCCTTCCTTAGCCAAAGC 59.526 52.381 0.00 0.00 40.32 3.51
869 932 2.095461 CTTCCTTCCTTAGCCAAAGCC 58.905 52.381 0.00 0.00 41.25 4.35
870 933 1.072266 TCCTTCCTTAGCCAAAGCCA 58.928 50.000 0.00 0.00 41.25 4.75
871 934 1.177401 CCTTCCTTAGCCAAAGCCAC 58.823 55.000 0.00 0.00 41.25 5.01
872 935 1.177401 CTTCCTTAGCCAAAGCCACC 58.823 55.000 0.00 0.00 41.25 4.61
873 936 0.480690 TTCCTTAGCCAAAGCCACCA 59.519 50.000 0.00 0.00 41.25 4.17
874 937 0.038166 TCCTTAGCCAAAGCCACCAG 59.962 55.000 0.00 0.00 41.25 4.00
875 938 0.038166 CCTTAGCCAAAGCCACCAGA 59.962 55.000 0.00 0.00 41.25 3.86
876 939 1.168714 CTTAGCCAAAGCCACCAGAC 58.831 55.000 0.00 0.00 41.25 3.51
877 940 0.251165 TTAGCCAAAGCCACCAGACC 60.251 55.000 0.00 0.00 41.25 3.85
878 941 2.463589 TAGCCAAAGCCACCAGACCG 62.464 60.000 0.00 0.00 41.25 4.79
879 942 3.365265 CCAAAGCCACCAGACCGC 61.365 66.667 0.00 0.00 0.00 5.68
880 943 3.365265 CAAAGCCACCAGACCGCC 61.365 66.667 0.00 0.00 0.00 6.13
911 974 1.848652 AAGCTAGCTTCTCCACCGTA 58.151 50.000 24.42 0.00 0.00 4.02
915 978 1.985447 TAGCTTCTCCACCGTACGCG 61.985 60.000 10.49 3.53 37.95 6.01
948 1015 3.181494 GCAAGCAAGCATACACATCATCA 60.181 43.478 0.00 0.00 0.00 3.07
949 1016 4.499188 GCAAGCAAGCATACACATCATCAT 60.499 41.667 0.00 0.00 0.00 2.45
951 1018 6.569801 GCAAGCAAGCATACACATCATCATAT 60.570 38.462 0.00 0.00 0.00 1.78
952 1019 6.738832 AGCAAGCATACACATCATCATATC 57.261 37.500 0.00 0.00 0.00 1.63
953 1020 6.235664 AGCAAGCATACACATCATCATATCA 58.764 36.000 0.00 0.00 0.00 2.15
954 1021 6.371825 AGCAAGCATACACATCATCATATCAG 59.628 38.462 0.00 0.00 0.00 2.90
955 1022 6.148976 GCAAGCATACACATCATCATATCAGT 59.851 38.462 0.00 0.00 0.00 3.41
956 1023 7.519002 CAAGCATACACATCATCATATCAGTG 58.481 38.462 0.00 0.00 0.00 3.66
957 1024 6.171213 AGCATACACATCATCATATCAGTGG 58.829 40.000 0.00 0.00 0.00 4.00
959 1026 6.091849 GCATACACATCATCATATCAGTGGTC 59.908 42.308 0.00 0.00 0.00 4.02
961 1028 4.342092 ACACATCATCATATCAGTGGTCGA 59.658 41.667 0.00 0.00 0.00 4.20
962 1029 5.011431 ACACATCATCATATCAGTGGTCGAT 59.989 40.000 0.00 0.00 0.00 3.59
963 1030 5.575995 CACATCATCATATCAGTGGTCGATC 59.424 44.000 0.00 0.00 0.00 3.69
964 1031 5.479724 ACATCATCATATCAGTGGTCGATCT 59.520 40.000 0.00 0.00 0.00 2.75
965 1032 5.382618 TCATCATATCAGTGGTCGATCTG 57.617 43.478 0.00 3.17 0.00 2.90
967 1034 2.297315 TCATATCAGTGGTCGATCTGCC 59.703 50.000 0.00 0.00 0.00 4.85
968 1035 1.775385 TATCAGTGGTCGATCTGCCA 58.225 50.000 0.00 1.54 0.00 4.92
969 1036 1.126488 ATCAGTGGTCGATCTGCCAT 58.874 50.000 8.11 0.00 37.09 4.40
970 1037 0.461548 TCAGTGGTCGATCTGCCATC 59.538 55.000 8.11 3.71 37.09 3.51
971 1038 0.463204 CAGTGGTCGATCTGCCATCT 59.537 55.000 8.11 5.48 37.09 2.90
972 1039 0.463204 AGTGGTCGATCTGCCATCTG 59.537 55.000 8.11 0.00 37.09 2.90
973 1040 1.144716 TGGTCGATCTGCCATCTGC 59.855 57.895 0.00 0.00 41.77 4.26
984 1054 1.226688 CCATCTGCATCGTCGTCGT 60.227 57.895 1.33 0.00 38.33 4.34
1018 1088 0.533755 GATGCGTAATGGGAGCAGCT 60.534 55.000 0.00 0.00 44.55 4.24
1019 1089 0.533755 ATGCGTAATGGGAGCAGCTC 60.534 55.000 14.69 14.69 44.55 4.09
1020 1090 1.153369 GCGTAATGGGAGCAGCTCA 60.153 57.895 24.09 5.43 31.08 4.26
1025 1104 2.054232 AATGGGAGCAGCTCATCTTG 57.946 50.000 24.09 0.00 36.43 3.02
1112 1203 1.781786 CTTGGTAGCAGCTCCTCCTA 58.218 55.000 0.00 0.00 0.00 2.94
1206 1297 3.710722 CTCCACGCCTTGGCCTCT 61.711 66.667 3.32 0.00 46.47 3.69
1286 1384 3.291101 GACTCCACCGCGCAAGGTA 62.291 63.158 8.75 0.00 43.89 3.08
1288 1386 1.449601 CTCCACCGCGCAAGGTAAT 60.450 57.895 8.75 0.00 43.89 1.89
1290 1388 0.249676 TCCACCGCGCAAGGTAATTA 59.750 50.000 8.75 0.00 43.89 1.40
1291 1389 0.655733 CCACCGCGCAAGGTAATTAG 59.344 55.000 8.75 0.00 43.89 1.73
1292 1390 0.655733 CACCGCGCAAGGTAATTAGG 59.344 55.000 8.75 0.00 43.89 2.69
1293 1391 0.463116 ACCGCGCAAGGTAATTAGGG 60.463 55.000 8.75 0.00 43.89 3.53
1295 1393 1.647084 GCGCAAGGTAATTAGGGCG 59.353 57.895 0.30 12.80 46.47 6.13
1296 1394 1.093496 GCGCAAGGTAATTAGGGCGT 61.093 55.000 0.30 0.00 45.58 5.68
1297 1395 1.807377 GCGCAAGGTAATTAGGGCGTA 60.807 52.381 0.30 0.00 45.58 4.42
1298 1396 2.132762 CGCAAGGTAATTAGGGCGTAG 58.867 52.381 10.21 0.00 39.65 3.51
1299 1397 2.482490 CGCAAGGTAATTAGGGCGTAGT 60.482 50.000 10.21 0.00 39.65 2.73
1300 1398 2.870411 GCAAGGTAATTAGGGCGTAGTG 59.130 50.000 0.00 0.00 0.00 2.74
1301 1399 3.680754 GCAAGGTAATTAGGGCGTAGTGT 60.681 47.826 0.00 0.00 0.00 3.55
1302 1400 3.814005 AGGTAATTAGGGCGTAGTGTG 57.186 47.619 0.00 0.00 0.00 3.82
1303 1401 2.159000 AGGTAATTAGGGCGTAGTGTGC 60.159 50.000 0.00 0.00 0.00 4.57
1304 1402 2.419021 GGTAATTAGGGCGTAGTGTGCA 60.419 50.000 0.00 0.00 0.00 4.57
1305 1403 2.024176 AATTAGGGCGTAGTGTGCAG 57.976 50.000 0.00 0.00 0.00 4.41
1306 1404 0.902531 ATTAGGGCGTAGTGTGCAGT 59.097 50.000 0.00 0.00 0.00 4.40
1307 1405 1.548081 TTAGGGCGTAGTGTGCAGTA 58.452 50.000 0.00 0.00 0.00 2.74
1308 1406 1.100510 TAGGGCGTAGTGTGCAGTAG 58.899 55.000 0.00 0.00 0.00 2.57
1309 1407 0.898789 AGGGCGTAGTGTGCAGTAGT 60.899 55.000 0.00 0.00 0.00 2.73
1310 1408 0.813184 GGGCGTAGTGTGCAGTAGTA 59.187 55.000 0.00 0.00 0.00 1.82
1311 1409 1.202268 GGGCGTAGTGTGCAGTAGTAG 60.202 57.143 0.00 0.00 0.00 2.57
1314 1412 2.358267 GCGTAGTGTGCAGTAGTAGGAT 59.642 50.000 8.75 0.00 0.00 3.24
1324 1422 4.098044 TGCAGTAGTAGGATGCTTACTGAC 59.902 45.833 23.02 16.27 40.62 3.51
1332 1430 7.998580 AGTAGGATGCTTACTGACTAAGTAAC 58.001 38.462 0.00 0.00 44.70 2.50
1352 1450 5.573337 AACTATTGCTCCTTCAATTCAGC 57.427 39.130 0.00 0.00 37.75 4.26
1361 1460 2.167693 CCTTCAATTCAGCCATGCATGT 59.832 45.455 24.58 4.88 0.00 3.21
1444 1543 1.012486 CAACCGTGCGGAGAGTAACC 61.012 60.000 18.16 0.00 38.96 2.85
1858 1963 2.420642 CTGATGGGTATCGGCAGAATG 58.579 52.381 0.00 0.00 36.04 2.67
1859 1964 1.072173 TGATGGGTATCGGCAGAATGG 59.928 52.381 0.00 0.00 36.04 3.16
1922 2027 4.698575 GTTCAAGGCAATCTCCTAGGTAG 58.301 47.826 9.08 5.31 34.82 3.18
1933 2038 5.869540 TCTCCTAGGTAGCTAGATTCCAT 57.130 43.478 26.83 0.00 0.00 3.41
1935 2040 6.249951 TCTCCTAGGTAGCTAGATTCCATTC 58.750 44.000 26.83 0.00 0.00 2.67
1941 2046 3.099267 AGCTAGATTCCATTCCGTTCG 57.901 47.619 0.00 0.00 0.00 3.95
1945 2050 4.621886 GCTAGATTCCATTCCGTTCGTATC 59.378 45.833 0.00 0.00 0.00 2.24
1965 2070 3.131396 TCCTCGCTCACTTCTTTTTCAC 58.869 45.455 0.00 0.00 0.00 3.18
2003 2108 5.447010 GCTTGATCTTACACTGCTTGTCATC 60.447 44.000 0.00 0.00 39.91 2.92
2004 2109 4.507710 TGATCTTACACTGCTTGTCATCC 58.492 43.478 0.00 0.00 39.91 3.51
2005 2110 4.020307 TGATCTTACACTGCTTGTCATCCA 60.020 41.667 0.00 0.00 39.91 3.41
2006 2111 4.350368 TCTTACACTGCTTGTCATCCAA 57.650 40.909 0.00 0.00 39.91 3.53
2007 2112 4.065088 TCTTACACTGCTTGTCATCCAAC 58.935 43.478 0.00 0.00 39.91 3.77
2008 2113 2.645838 ACACTGCTTGTCATCCAACT 57.354 45.000 0.00 0.00 29.79 3.16
2009 2114 2.498167 ACACTGCTTGTCATCCAACTC 58.502 47.619 0.00 0.00 29.79 3.01
2010 2115 2.105477 ACACTGCTTGTCATCCAACTCT 59.895 45.455 0.00 0.00 29.79 3.24
2045 2150 0.108424 CAACGAAGCAGAGGAGGAGG 60.108 60.000 0.00 0.00 0.00 4.30
2046 2151 0.251832 AACGAAGCAGAGGAGGAGGA 60.252 55.000 0.00 0.00 0.00 3.71
2103 2208 2.801342 GCATGGAGTAGAAGAAGAGCCG 60.801 54.545 0.00 0.00 0.00 5.52
2104 2209 1.475403 TGGAGTAGAAGAAGAGCCGG 58.525 55.000 0.00 0.00 0.00 6.13
2105 2210 0.747852 GGAGTAGAAGAAGAGCCGGG 59.252 60.000 2.18 0.00 0.00 5.73
2106 2211 0.747852 GAGTAGAAGAAGAGCCGGGG 59.252 60.000 2.18 0.00 0.00 5.73
2107 2212 0.688087 AGTAGAAGAAGAGCCGGGGG 60.688 60.000 2.18 0.00 0.00 5.40
2108 2213 0.686769 GTAGAAGAAGAGCCGGGGGA 60.687 60.000 2.18 0.00 0.00 4.81
2109 2214 0.397254 TAGAAGAAGAGCCGGGGGAG 60.397 60.000 2.18 0.00 0.00 4.30
2110 2215 2.689034 AAGAAGAGCCGGGGGAGG 60.689 66.667 2.18 0.00 0.00 4.30
2111 2216 3.254035 AAGAAGAGCCGGGGGAGGA 62.254 63.158 2.18 0.00 0.00 3.71
2112 2217 3.157949 GAAGAGCCGGGGGAGGAG 61.158 72.222 2.18 0.00 0.00 3.69
2126 2240 3.855853 GGAGGAGGAGAAGGCCGC 61.856 72.222 0.00 0.00 0.00 6.53
2127 2241 4.214327 GAGGAGGAGAAGGCCGCG 62.214 72.222 0.00 0.00 0.00 6.46
2473 2587 0.528684 GCTCACCGAGACAGGTATGC 60.529 60.000 0.00 0.00 43.89 3.14
2510 2628 7.938563 TTGTTTACTGCCAAATTGATTGTAC 57.061 32.000 0.00 0.00 37.32 2.90
2563 2687 6.383763 TCATCATCACCAAATATTCCCCAAT 58.616 36.000 0.00 0.00 0.00 3.16
2696 2825 9.326413 AGAATTCTTATTACACGTTCCCAATAG 57.674 33.333 0.88 0.00 0.00 1.73
3035 3176 2.373707 GGCCCAGATCTGCCTCACT 61.374 63.158 17.76 0.00 44.46 3.41
3071 3212 0.672711 GGAACTACACCACCTTCCGC 60.673 60.000 0.00 0.00 0.00 5.54
3115 3256 1.225426 GCACCATGATGCTGGAGGA 59.775 57.895 4.24 0.00 42.62 3.71
3206 3347 4.070552 GAGCCCTTCGAGCACGGT 62.071 66.667 3.11 0.00 40.21 4.83
3281 3422 6.916848 CTCGTCCCAGAGTTCAGAGGTACT 62.917 54.167 0.00 0.00 35.65 2.73
3282 3423 3.621709 CGTCCCAGAGTTCAGAGGTACTA 60.622 52.174 0.00 0.00 41.55 1.82
3294 3445 4.342378 TCAGAGGTACTACCATTGATCTGC 59.658 45.833 13.24 0.00 41.55 4.26
3299 3450 3.939740 ACTACCATTGATCTGCCATGT 57.060 42.857 0.00 0.00 0.00 3.21
3301 3452 3.949754 ACTACCATTGATCTGCCATGTTG 59.050 43.478 0.00 0.00 0.00 3.33
3512 3680 2.158842 CCAGATGTTCAGGGAGATGGTC 60.159 54.545 0.00 0.00 0.00 4.02
3586 3754 0.321653 AACAAGGCCGTGAGTGATCC 60.322 55.000 26.25 0.00 0.00 3.36
3589 3757 2.202756 GGCCGTGAGTGATCCGAC 60.203 66.667 0.00 0.00 0.00 4.79
3614 3782 2.137129 TCTTACGTACGTGCAAGCAA 57.863 45.000 30.25 14.37 0.00 3.91
3643 3838 6.256104 TCATGCATTCTGAAAGTTTTTGTGTG 59.744 34.615 0.00 0.00 33.76 3.82
3661 3858 1.205893 GTGGATCAGAAGAAGAGCCGT 59.794 52.381 0.00 0.00 44.32 5.68
3836 4033 3.468326 GAGAAGATGGGCCGGCTCC 62.468 68.421 26.97 24.50 0.00 4.70
3920 4129 3.959449 CTGAGATCTCATCAGAACCTCCA 59.041 47.826 25.30 0.00 45.80 3.86
3922 4131 5.709594 TGAGATCTCATCAGAACCTCCATA 58.290 41.667 21.67 0.00 34.14 2.74
3951 4164 3.136443 TCCATGGACACTCTTTTGACTGT 59.864 43.478 11.44 0.00 0.00 3.55
3970 4186 6.544564 TGACTGTAACCCTACTTTTCCTTTTG 59.455 38.462 0.00 0.00 0.00 2.44
3971 4187 6.429151 ACTGTAACCCTACTTTTCCTTTTGT 58.571 36.000 0.00 0.00 0.00 2.83
3995 4215 7.120138 TGTTTATTTCGTTCACCTTATCTTCCC 59.880 37.037 0.00 0.00 0.00 3.97
4005 4227 7.091533 TCACCTTATCTTCCCTTTCTCTTTT 57.908 36.000 0.00 0.00 0.00 2.27
4038 4260 6.319141 AGCGACAAAAGAAAAGATAAAGCT 57.681 33.333 0.00 0.00 0.00 3.74
4054 4276 3.380479 AAGCTGTAGTGTTTGCGTAGA 57.620 42.857 0.00 0.00 0.00 2.59
4081 4303 0.305617 ATATGCATGCAACGCACTCG 59.694 50.000 26.68 0.00 43.04 4.18
4093 4315 1.657556 GCACTCGGCCTCTAGCTAG 59.342 63.158 15.01 15.01 43.05 3.42
4094 4316 1.657556 CACTCGGCCTCTAGCTAGC 59.342 63.158 16.35 6.62 43.05 3.42
4095 4317 0.821711 CACTCGGCCTCTAGCTAGCT 60.822 60.000 23.12 23.12 43.05 3.32
4096 4318 0.766131 ACTCGGCCTCTAGCTAGCTA 59.234 55.000 22.85 22.85 43.05 3.32
4100 4325 2.027929 TCGGCCTCTAGCTAGCTACTAG 60.028 54.545 20.67 18.60 43.05 2.57
4157 4382 1.529226 AGAAGCGAGATCGATCGGAT 58.471 50.000 19.33 11.64 42.94 4.18
4164 4389 3.679725 CGAGATCGATCGGATTCATCTC 58.320 50.000 23.70 23.70 43.02 2.75
4205 4430 5.376537 GTGTTGTAAAGGCGTAATGTACAC 58.623 41.667 0.00 0.00 0.00 2.90
4240 4465 0.898320 ATAAGATGAGATCGGCCCGG 59.102 55.000 1.90 0.00 0.00 5.73
4301 4530 4.028852 TGACATACGCACACAGAGATAC 57.971 45.455 0.00 0.00 0.00 2.24
4302 4531 3.181490 TGACATACGCACACAGAGATACC 60.181 47.826 0.00 0.00 0.00 2.73
4328 4565 1.821753 AGAGAGATATTGGGATCGGCG 59.178 52.381 0.00 0.00 0.00 6.46
4349 4586 1.809619 CGGCAGTACCATGTCACCG 60.810 63.158 0.00 0.00 39.03 4.94
4356 4593 0.601576 TACCATGTCACCGTGTGTGC 60.602 55.000 0.00 0.00 45.03 4.57
4439 4678 6.860023 GGCTTTGATAGTTTGATATGTGCATC 59.140 38.462 0.00 0.00 0.00 3.91
4557 4798 1.588824 ATGCATGTCACGCACTTGGG 61.589 55.000 0.00 0.00 43.35 4.12
4558 4799 2.260869 GCATGTCACGCACTTGGGT 61.261 57.895 0.00 0.00 42.22 4.51
4566 4807 1.898574 CGCACTTGGGTTTGCCTCT 60.899 57.895 0.00 0.00 35.14 3.69
4580 4821 3.370840 TGCCTCTGCATTTAAGGATGT 57.629 42.857 8.34 0.00 44.23 3.06
4581 4822 4.502105 TGCCTCTGCATTTAAGGATGTA 57.498 40.909 8.34 0.00 44.23 2.29
4582 4823 5.052693 TGCCTCTGCATTTAAGGATGTAT 57.947 39.130 8.34 0.00 44.23 2.29
4583 4824 6.186420 TGCCTCTGCATTTAAGGATGTATA 57.814 37.500 8.34 0.00 44.23 1.47
4585 4826 5.123027 GCCTCTGCATTTAAGGATGTATAGC 59.877 44.000 8.34 0.00 37.47 2.97
4587 4828 6.186420 TCTGCATTTAAGGATGTATAGCCA 57.814 37.500 0.00 0.00 33.81 4.75
4588 4829 5.997746 TCTGCATTTAAGGATGTATAGCCAC 59.002 40.000 0.00 0.00 33.81 5.01
4589 4830 5.689835 TGCATTTAAGGATGTATAGCCACA 58.310 37.500 0.00 0.00 33.81 4.17
4590 4831 6.306199 TGCATTTAAGGATGTATAGCCACAT 58.694 36.000 0.00 0.00 41.83 3.21
4629 4871 4.935352 TTCTTGCACTATTTGGCTTTGT 57.065 36.364 0.00 0.00 0.00 2.83
4681 4930 4.649674 ACTTTATCTTGGATCCTCTGCGTA 59.350 41.667 14.23 0.00 0.00 4.42
4721 4972 1.137282 TGTATATGCGCGGTTGGAAGA 59.863 47.619 8.83 0.00 0.00 2.87
4734 4985 0.833287 TGGAAGAGCTATGGCCAGTC 59.167 55.000 13.05 5.28 39.73 3.51
4742 4993 1.875576 GCTATGGCCAGTCGGAAGATG 60.876 57.143 13.05 0.00 45.19 2.90
4768 5019 3.858503 GCAACAAAAGGAGGCATCTGTTC 60.859 47.826 0.00 0.00 0.00 3.18
4771 5022 3.508793 ACAAAAGGAGGCATCTGTTCATG 59.491 43.478 0.00 0.00 0.00 3.07
4772 5023 3.446442 AAAGGAGGCATCTGTTCATGT 57.554 42.857 0.00 0.00 0.00 3.21
4773 5024 4.574674 AAAGGAGGCATCTGTTCATGTA 57.425 40.909 0.00 0.00 0.00 2.29
4791 5046 6.739112 TCATGTAGTATCTCCTCGTTGATTG 58.261 40.000 0.00 0.00 0.00 2.67
4803 5058 1.541147 CGTTGATTGTGGGTTGCAGAT 59.459 47.619 0.00 0.00 0.00 2.90
4833 5089 0.895530 GAGAGGGTGTCGATGTTGGA 59.104 55.000 0.00 0.00 0.00 3.53
4836 5092 1.003839 GGGTGTCGATGTTGGAGCA 60.004 57.895 0.00 0.00 0.00 4.26
4837 5093 0.605319 GGGTGTCGATGTTGGAGCAA 60.605 55.000 0.00 0.00 0.00 3.91
4838 5094 0.517316 GGTGTCGATGTTGGAGCAAC 59.483 55.000 0.00 0.00 43.78 4.17
4839 5095 1.512926 GTGTCGATGTTGGAGCAACT 58.487 50.000 0.00 0.00 43.85 3.16
4840 5096 1.195448 GTGTCGATGTTGGAGCAACTG 59.805 52.381 0.00 0.00 43.85 3.16
4841 5097 0.798776 GTCGATGTTGGAGCAACTGG 59.201 55.000 0.00 0.00 43.85 4.00
4842 5098 0.955428 TCGATGTTGGAGCAACTGGC 60.955 55.000 0.00 0.00 43.85 4.85
4851 5107 3.365535 GCAACTGGCGACCCATTT 58.634 55.556 0.00 0.00 41.21 2.32
4852 5108 1.212751 GCAACTGGCGACCCATTTC 59.787 57.895 0.00 0.00 41.21 2.17
4853 5109 1.523154 GCAACTGGCGACCCATTTCA 61.523 55.000 0.00 0.00 41.21 2.69
4854 5110 1.176527 CAACTGGCGACCCATTTCAT 58.823 50.000 0.00 0.00 41.21 2.57
4855 5111 1.133025 CAACTGGCGACCCATTTCATC 59.867 52.381 0.00 0.00 41.21 2.92
4856 5112 0.394352 ACTGGCGACCCATTTCATCC 60.394 55.000 0.00 0.00 41.21 3.51
4857 5113 1.439353 CTGGCGACCCATTTCATCCG 61.439 60.000 0.00 0.00 41.21 4.18
4858 5114 1.451387 GGCGACCCATTTCATCCGT 60.451 57.895 0.00 0.00 0.00 4.69
4859 5115 1.714899 GGCGACCCATTTCATCCGTG 61.715 60.000 0.00 0.00 0.00 4.94
4860 5116 1.714899 GCGACCCATTTCATCCGTGG 61.715 60.000 0.00 0.00 0.00 4.94
4861 5117 1.714899 CGACCCATTTCATCCGTGGC 61.715 60.000 0.00 0.00 0.00 5.01
4862 5118 1.379843 ACCCATTTCATCCGTGGCC 60.380 57.895 0.00 0.00 0.00 5.36
4863 5119 2.127232 CCCATTTCATCCGTGGCCC 61.127 63.158 0.00 0.00 0.00 5.80
4864 5120 2.480610 CCATTTCATCCGTGGCCCG 61.481 63.158 0.00 2.96 0.00 6.13
4865 5121 1.748879 CATTTCATCCGTGGCCCGT 60.749 57.895 0.00 0.00 33.66 5.28
4866 5122 1.001393 ATTTCATCCGTGGCCCGTT 60.001 52.632 0.00 0.00 33.66 4.44
4867 5123 1.029947 ATTTCATCCGTGGCCCGTTC 61.030 55.000 0.00 0.00 33.66 3.95
4868 5124 3.943479 TTCATCCGTGGCCCGTTCG 62.943 63.158 0.00 0.00 33.66 3.95
4869 5125 4.752879 CATCCGTGGCCCGTTCGT 62.753 66.667 0.00 0.00 33.66 3.85
4870 5126 4.011517 ATCCGTGGCCCGTTCGTT 62.012 61.111 0.00 0.00 33.66 3.85
4871 5127 3.540367 ATCCGTGGCCCGTTCGTTT 62.540 57.895 0.00 0.00 33.66 3.60
4872 5128 4.020378 CCGTGGCCCGTTCGTTTG 62.020 66.667 0.00 0.00 33.66 2.93
4873 5129 4.020378 CGTGGCCCGTTCGTTTGG 62.020 66.667 0.00 0.00 0.00 3.28
4874 5130 2.592287 GTGGCCCGTTCGTTTGGA 60.592 61.111 0.00 0.00 0.00 3.53
4875 5131 1.969589 GTGGCCCGTTCGTTTGGAT 60.970 57.895 0.00 0.00 0.00 3.41
4876 5132 1.969064 TGGCCCGTTCGTTTGGATG 60.969 57.895 0.00 0.00 0.00 3.51
4877 5133 2.696759 GGCCCGTTCGTTTGGATGG 61.697 63.158 0.00 0.00 0.00 3.51
4878 5134 1.673009 GCCCGTTCGTTTGGATGGA 60.673 57.895 0.00 0.00 0.00 3.41
4879 5135 1.918868 GCCCGTTCGTTTGGATGGAC 61.919 60.000 0.00 0.00 0.00 4.02
4880 5136 1.632046 CCCGTTCGTTTGGATGGACG 61.632 60.000 0.00 0.00 42.29 4.79
4881 5137 1.131826 CGTTCGTTTGGATGGACGC 59.868 57.895 0.00 0.00 37.01 5.19
4882 5138 1.561717 CGTTCGTTTGGATGGACGCA 61.562 55.000 0.00 0.00 37.01 5.24
4883 5139 0.165944 GTTCGTTTGGATGGACGCAG 59.834 55.000 0.00 0.00 39.03 5.18
4884 5140 0.034198 TTCGTTTGGATGGACGCAGA 59.966 50.000 0.00 0.00 39.03 4.26
4885 5141 0.249120 TCGTTTGGATGGACGCAGAT 59.751 50.000 0.00 0.00 39.03 2.90
4886 5142 1.478916 TCGTTTGGATGGACGCAGATA 59.521 47.619 0.00 0.00 39.03 1.98
4887 5143 2.093921 TCGTTTGGATGGACGCAGATAA 60.094 45.455 0.00 0.00 39.03 1.75
4888 5144 2.675844 CGTTTGGATGGACGCAGATAAA 59.324 45.455 0.00 0.00 32.11 1.40
4889 5145 3.126171 CGTTTGGATGGACGCAGATAAAA 59.874 43.478 0.00 0.00 32.11 1.52
4890 5146 4.378978 CGTTTGGATGGACGCAGATAAAAA 60.379 41.667 0.00 0.00 32.11 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.184068 TCAATTTTATTCATCTCCCCGACAA 58.816 36.000 0.00 0.00 0.00 3.18
1 2 5.750524 TCAATTTTATTCATCTCCCCGACA 58.249 37.500 0.00 0.00 0.00 4.35
2 3 6.693315 TTCAATTTTATTCATCTCCCCGAC 57.307 37.500 0.00 0.00 0.00 4.79
3 4 6.833416 ACATTCAATTTTATTCATCTCCCCGA 59.167 34.615 0.00 0.00 0.00 5.14
4 5 7.042797 ACATTCAATTTTATTCATCTCCCCG 57.957 36.000 0.00 0.00 0.00 5.73
44 45 9.088512 GTTGAAGAAATGAATGTATCTAGACGT 57.911 33.333 0.00 0.00 0.00 4.34
45 46 9.087424 TGTTGAAGAAATGAATGTATCTAGACG 57.913 33.333 0.00 0.00 0.00 4.18
58 59 9.528018 GTCCAAAAATACTTGTTGAAGAAATGA 57.472 29.630 0.00 0.00 32.98 2.57
59 60 9.311916 TGTCCAAAAATACTTGTTGAAGAAATG 57.688 29.630 0.00 0.00 32.98 2.32
60 61 9.533253 CTGTCCAAAAATACTTGTTGAAGAAAT 57.467 29.630 0.00 0.00 32.98 2.17
61 62 8.744652 TCTGTCCAAAAATACTTGTTGAAGAAA 58.255 29.630 0.00 0.00 32.98 2.52
62 63 8.287439 TCTGTCCAAAAATACTTGTTGAAGAA 57.713 30.769 0.00 0.00 32.98 2.52
63 64 7.873719 TCTGTCCAAAAATACTTGTTGAAGA 57.126 32.000 0.00 0.00 32.98 2.87
64 65 7.649306 CCTTCTGTCCAAAAATACTTGTTGAAG 59.351 37.037 0.00 0.00 35.07 3.02
65 66 7.340743 TCCTTCTGTCCAAAAATACTTGTTGAA 59.659 33.333 0.00 0.00 0.00 2.69
66 67 6.831353 TCCTTCTGTCCAAAAATACTTGTTGA 59.169 34.615 0.00 0.00 0.00 3.18
67 68 7.038154 TCCTTCTGTCCAAAAATACTTGTTG 57.962 36.000 0.00 0.00 0.00 3.33
68 69 6.833933 ACTCCTTCTGTCCAAAAATACTTGTT 59.166 34.615 0.00 0.00 0.00 2.83
69 70 6.365520 ACTCCTTCTGTCCAAAAATACTTGT 58.634 36.000 0.00 0.00 0.00 3.16
70 71 6.884280 ACTCCTTCTGTCCAAAAATACTTG 57.116 37.500 0.00 0.00 0.00 3.16
71 72 7.746703 AGTACTCCTTCTGTCCAAAAATACTT 58.253 34.615 0.00 0.00 0.00 2.24
72 73 7.317722 AGTACTCCTTCTGTCCAAAAATACT 57.682 36.000 0.00 0.00 0.00 2.12
73 74 7.548427 GGTAGTACTCCTTCTGTCCAAAAATAC 59.452 40.741 0.00 0.00 0.00 1.89
74 75 7.236019 TGGTAGTACTCCTTCTGTCCAAAAATA 59.764 37.037 0.00 0.00 0.00 1.40
75 76 6.043938 TGGTAGTACTCCTTCTGTCCAAAAAT 59.956 38.462 0.00 0.00 0.00 1.82
76 77 5.367352 TGGTAGTACTCCTTCTGTCCAAAAA 59.633 40.000 0.00 0.00 0.00 1.94
77 78 4.903049 TGGTAGTACTCCTTCTGTCCAAAA 59.097 41.667 0.00 0.00 0.00 2.44
78 79 4.485875 TGGTAGTACTCCTTCTGTCCAAA 58.514 43.478 0.00 0.00 0.00 3.28
79 80 4.122337 TGGTAGTACTCCTTCTGTCCAA 57.878 45.455 0.00 0.00 0.00 3.53
80 81 3.820195 TGGTAGTACTCCTTCTGTCCA 57.180 47.619 0.00 0.00 0.00 4.02
81 82 4.617762 CGTTTGGTAGTACTCCTTCTGTCC 60.618 50.000 0.00 0.00 0.00 4.02
82 83 4.483311 CGTTTGGTAGTACTCCTTCTGTC 58.517 47.826 0.00 0.00 0.00 3.51
83 84 3.257624 CCGTTTGGTAGTACTCCTTCTGT 59.742 47.826 0.00 0.00 0.00 3.41
84 85 3.846360 CCGTTTGGTAGTACTCCTTCTG 58.154 50.000 0.00 0.00 0.00 3.02
85 86 2.233186 GCCGTTTGGTAGTACTCCTTCT 59.767 50.000 0.00 0.00 37.67 2.85
86 87 2.233186 AGCCGTTTGGTAGTACTCCTTC 59.767 50.000 0.00 0.00 37.67 3.46
87 88 2.254508 AGCCGTTTGGTAGTACTCCTT 58.745 47.619 0.00 0.00 37.67 3.36
88 89 1.934410 AGCCGTTTGGTAGTACTCCT 58.066 50.000 0.00 0.00 37.67 3.69
89 90 2.159184 GGTAGCCGTTTGGTAGTACTCC 60.159 54.545 0.00 1.20 37.67 3.85
90 91 2.478539 CGGTAGCCGTTTGGTAGTACTC 60.479 54.545 0.00 0.00 42.73 2.59
91 92 1.474077 CGGTAGCCGTTTGGTAGTACT 59.526 52.381 0.00 0.00 42.73 2.73
92 93 1.913317 CGGTAGCCGTTTGGTAGTAC 58.087 55.000 0.00 0.00 42.73 2.73
111 112 0.027324 CTACTTCCGCCGTCGTCTAC 59.973 60.000 0.00 0.00 0.00 2.59
112 113 0.108186 TCTACTTCCGCCGTCGTCTA 60.108 55.000 0.00 0.00 0.00 2.59
113 114 1.376424 TCTACTTCCGCCGTCGTCT 60.376 57.895 0.00 0.00 0.00 4.18
114 115 1.226239 GTCTACTTCCGCCGTCGTC 60.226 63.158 0.00 0.00 0.00 4.20
115 116 1.968017 TGTCTACTTCCGCCGTCGT 60.968 57.895 0.00 0.00 0.00 4.34
116 117 1.513586 GTGTCTACTTCCGCCGTCG 60.514 63.158 0.00 0.00 0.00 5.12
117 118 1.153881 GGTGTCTACTTCCGCCGTC 60.154 63.158 0.00 0.00 0.00 4.79
118 119 0.322816 TAGGTGTCTACTTCCGCCGT 60.323 55.000 0.00 0.00 36.35 5.68
119 120 0.813184 TTAGGTGTCTACTTCCGCCG 59.187 55.000 0.00 0.00 36.35 6.46
120 121 1.471153 GCTTAGGTGTCTACTTCCGCC 60.471 57.143 0.00 0.00 0.00 6.13
121 122 1.203994 TGCTTAGGTGTCTACTTCCGC 59.796 52.381 0.00 0.00 0.00 5.54
122 123 3.251571 GTTGCTTAGGTGTCTACTTCCG 58.748 50.000 0.00 0.00 0.00 4.30
123 124 3.597255 GGTTGCTTAGGTGTCTACTTCC 58.403 50.000 0.00 0.00 0.00 3.46
124 125 3.251571 CGGTTGCTTAGGTGTCTACTTC 58.748 50.000 0.00 0.00 0.00 3.01
125 126 2.612221 GCGGTTGCTTAGGTGTCTACTT 60.612 50.000 0.00 0.00 38.39 2.24
126 127 1.067071 GCGGTTGCTTAGGTGTCTACT 60.067 52.381 0.00 0.00 38.39 2.57
127 128 1.356938 GCGGTTGCTTAGGTGTCTAC 58.643 55.000 0.00 0.00 38.39 2.59
128 129 0.248289 GGCGGTTGCTTAGGTGTCTA 59.752 55.000 0.00 0.00 42.25 2.59
129 130 1.003718 GGCGGTTGCTTAGGTGTCT 60.004 57.895 0.00 0.00 42.25 3.41
130 131 0.887387 TTGGCGGTTGCTTAGGTGTC 60.887 55.000 0.00 0.00 42.25 3.67
131 132 0.466555 TTTGGCGGTTGCTTAGGTGT 60.467 50.000 0.00 0.00 42.25 4.16
132 133 0.671251 TTTTGGCGGTTGCTTAGGTG 59.329 50.000 0.00 0.00 42.25 4.00
133 134 0.671796 GTTTTGGCGGTTGCTTAGGT 59.328 50.000 0.00 0.00 42.25 3.08
134 135 0.386731 CGTTTTGGCGGTTGCTTAGG 60.387 55.000 0.00 0.00 42.25 2.69
135 136 0.386731 CCGTTTTGGCGGTTGCTTAG 60.387 55.000 0.00 0.00 46.11 2.18
136 137 1.655329 CCGTTTTGGCGGTTGCTTA 59.345 52.632 0.00 0.00 46.11 3.09
137 138 2.415426 CCGTTTTGGCGGTTGCTT 59.585 55.556 0.00 0.00 46.11 3.91
159 160 2.990479 CCTCCCAAGACCCTTCGG 59.010 66.667 0.00 0.00 0.00 4.30
160 161 2.269241 GCCTCCCAAGACCCTTCG 59.731 66.667 0.00 0.00 0.00 3.79
161 162 2.231380 TGGCCTCCCAAGACCCTTC 61.231 63.158 3.32 0.00 38.46 3.46
162 163 2.121506 TGGCCTCCCAAGACCCTT 60.122 61.111 3.32 0.00 38.46 3.95
163 164 2.936032 GTGGCCTCCCAAGACCCT 60.936 66.667 3.32 0.00 44.33 4.34
164 165 4.048470 GGTGGCCTCCCAAGACCC 62.048 72.222 13.20 0.00 44.33 4.46
165 166 2.155197 AATGGTGGCCTCCCAAGACC 62.155 60.000 21.06 10.27 44.33 3.85
166 167 0.967380 CAATGGTGGCCTCCCAAGAC 60.967 60.000 21.06 0.00 44.33 3.01
167 168 1.383799 CAATGGTGGCCTCCCAAGA 59.616 57.895 21.06 2.53 44.33 3.02
168 169 1.683365 CCAATGGTGGCCTCCCAAG 60.683 63.158 21.06 14.14 44.33 3.61
169 170 1.517538 ATCCAATGGTGGCCTCCCAA 61.518 55.000 21.06 3.71 45.54 4.12
170 171 1.517538 AATCCAATGGTGGCCTCCCA 61.518 55.000 21.06 18.30 45.54 4.37
171 172 0.756815 GAATCCAATGGTGGCCTCCC 60.757 60.000 21.06 12.97 45.54 4.30
172 173 0.259938 AGAATCCAATGGTGGCCTCC 59.740 55.000 17.33 17.33 45.54 4.30
173 174 2.149973 AAGAATCCAATGGTGGCCTC 57.850 50.000 3.32 0.00 45.54 4.70
174 175 2.311542 TGTAAGAATCCAATGGTGGCCT 59.688 45.455 3.32 0.00 45.54 5.19
175 176 2.733956 TGTAAGAATCCAATGGTGGCC 58.266 47.619 0.00 0.00 45.54 5.36
176 177 3.429410 GCTTGTAAGAATCCAATGGTGGC 60.429 47.826 0.00 0.00 45.54 5.01
178 179 4.142315 CCTGCTTGTAAGAATCCAATGGTG 60.142 45.833 0.00 0.00 0.00 4.17
179 180 4.019174 CCTGCTTGTAAGAATCCAATGGT 58.981 43.478 0.00 0.00 0.00 3.55
180 181 3.181483 GCCTGCTTGTAAGAATCCAATGG 60.181 47.826 0.00 0.00 0.00 3.16
181 182 3.181483 GGCCTGCTTGTAAGAATCCAATG 60.181 47.826 0.00 0.00 0.00 2.82
182 183 3.026694 GGCCTGCTTGTAAGAATCCAAT 58.973 45.455 0.00 0.00 0.00 3.16
183 184 2.446435 GGCCTGCTTGTAAGAATCCAA 58.554 47.619 0.00 0.00 0.00 3.53
184 185 1.678728 CGGCCTGCTTGTAAGAATCCA 60.679 52.381 0.00 0.00 0.00 3.41
185 186 1.017387 CGGCCTGCTTGTAAGAATCC 58.983 55.000 0.00 0.00 0.00 3.01
186 187 2.024176 TCGGCCTGCTTGTAAGAATC 57.976 50.000 0.00 0.00 0.00 2.52
187 188 2.290323 ACTTCGGCCTGCTTGTAAGAAT 60.290 45.455 0.00 0.00 0.00 2.40
188 189 1.071699 ACTTCGGCCTGCTTGTAAGAA 59.928 47.619 0.00 0.00 0.00 2.52
189 190 0.685097 ACTTCGGCCTGCTTGTAAGA 59.315 50.000 0.00 0.00 0.00 2.10
190 191 1.079503 GACTTCGGCCTGCTTGTAAG 58.920 55.000 0.00 0.00 0.00 2.34
191 192 0.685097 AGACTTCGGCCTGCTTGTAA 59.315 50.000 0.00 0.00 0.00 2.41
192 193 0.246635 GAGACTTCGGCCTGCTTGTA 59.753 55.000 0.00 0.00 0.00 2.41
193 194 1.004440 GAGACTTCGGCCTGCTTGT 60.004 57.895 0.00 0.00 0.00 3.16
194 195 2.097038 CGAGACTTCGGCCTGCTTG 61.097 63.158 0.00 0.00 43.05 4.01
195 196 2.262915 CGAGACTTCGGCCTGCTT 59.737 61.111 0.00 0.00 43.05 3.91
203 204 0.590230 GCGACTGATCCGAGACTTCG 60.590 60.000 0.00 0.00 46.29 3.79
204 205 0.248702 GGCGACTGATCCGAGACTTC 60.249 60.000 0.00 0.00 0.00 3.01
205 206 1.668101 GGGCGACTGATCCGAGACTT 61.668 60.000 0.00 0.00 0.00 3.01
206 207 2.122167 GGGCGACTGATCCGAGACT 61.122 63.158 0.00 0.00 0.00 3.24
207 208 2.413765 GGGCGACTGATCCGAGAC 59.586 66.667 0.00 0.00 0.00 3.36
208 209 2.833582 GGGGCGACTGATCCGAGA 60.834 66.667 0.00 0.00 0.00 4.04
209 210 3.147595 TGGGGCGACTGATCCGAG 61.148 66.667 0.00 0.00 0.00 4.63
210 211 3.458163 GTGGGGCGACTGATCCGA 61.458 66.667 0.00 0.00 0.00 4.55
211 212 3.770040 TGTGGGGCGACTGATCCG 61.770 66.667 0.00 0.00 0.00 4.18
212 213 2.125106 GTGTGGGGCGACTGATCC 60.125 66.667 0.00 0.00 0.00 3.36
213 214 1.741770 GTGTGTGGGGCGACTGATC 60.742 63.158 0.00 0.00 0.00 2.92
214 215 2.347490 GTGTGTGGGGCGACTGAT 59.653 61.111 0.00 0.00 0.00 2.90
215 216 3.936203 GGTGTGTGGGGCGACTGA 61.936 66.667 0.00 0.00 0.00 3.41
216 217 3.551496 ATGGTGTGTGGGGCGACTG 62.551 63.158 0.00 0.00 0.00 3.51
217 218 3.249189 ATGGTGTGTGGGGCGACT 61.249 61.111 0.00 0.00 0.00 4.18
218 219 3.055719 CATGGTGTGTGGGGCGAC 61.056 66.667 0.00 0.00 0.00 5.19
221 222 4.684134 AGGCATGGTGTGTGGGGC 62.684 66.667 0.00 0.00 0.00 5.80
222 223 2.361610 GAGGCATGGTGTGTGGGG 60.362 66.667 0.00 0.00 0.00 4.96
223 224 2.361610 GGAGGCATGGTGTGTGGG 60.362 66.667 0.00 0.00 0.00 4.61
224 225 1.676635 CTGGAGGCATGGTGTGTGG 60.677 63.158 0.00 0.00 0.00 4.17
225 226 0.957395 GACTGGAGGCATGGTGTGTG 60.957 60.000 0.00 0.00 0.00 3.82
226 227 1.130054 AGACTGGAGGCATGGTGTGT 61.130 55.000 0.00 0.00 0.00 3.72
227 228 0.392193 GAGACTGGAGGCATGGTGTG 60.392 60.000 0.00 0.00 0.00 3.82
228 229 1.557269 GGAGACTGGAGGCATGGTGT 61.557 60.000 0.00 0.00 0.00 4.16
229 230 1.222936 GGAGACTGGAGGCATGGTG 59.777 63.158 0.00 0.00 0.00 4.17
230 231 1.229625 TGGAGACTGGAGGCATGGT 60.230 57.895 0.00 0.00 0.00 3.55
231 232 0.979709 TCTGGAGACTGGAGGCATGG 60.980 60.000 0.00 0.00 0.00 3.66
232 233 0.464870 CTCTGGAGACTGGAGGCATG 59.535 60.000 0.00 0.00 0.00 4.06
233 234 0.690411 CCTCTGGAGACTGGAGGCAT 60.690 60.000 0.00 0.00 41.43 4.40
234 235 1.305633 CCTCTGGAGACTGGAGGCA 60.306 63.158 0.00 0.00 41.43 4.75
235 236 1.000993 TCCTCTGGAGACTGGAGGC 59.999 63.158 9.61 0.00 44.68 4.70
245 246 2.043852 GTCCGCCTCTCCTCTGGA 60.044 66.667 0.00 0.00 0.00 3.86
246 247 2.363018 TGTCCGCCTCTCCTCTGG 60.363 66.667 0.00 0.00 0.00 3.86
247 248 1.536073 TTGTGTCCGCCTCTCCTCTG 61.536 60.000 0.00 0.00 0.00 3.35
248 249 1.228894 TTGTGTCCGCCTCTCCTCT 60.229 57.895 0.00 0.00 0.00 3.69
249 250 1.216710 CTTGTGTCCGCCTCTCCTC 59.783 63.158 0.00 0.00 0.00 3.71
250 251 2.286523 CCTTGTGTCCGCCTCTCCT 61.287 63.158 0.00 0.00 0.00 3.69
251 252 2.266055 CCTTGTGTCCGCCTCTCC 59.734 66.667 0.00 0.00 0.00 3.71
252 253 2.266055 CCCTTGTGTCCGCCTCTC 59.734 66.667 0.00 0.00 0.00 3.20
253 254 4.021925 GCCCTTGTGTCCGCCTCT 62.022 66.667 0.00 0.00 0.00 3.69
272 273 3.479269 GTTCCTCGTTCTGCCGCG 61.479 66.667 0.00 0.00 0.00 6.46
273 274 3.479269 CGTTCCTCGTTCTGCCGC 61.479 66.667 0.00 0.00 34.52 6.53
274 275 1.801913 CTCGTTCCTCGTTCTGCCG 60.802 63.158 0.00 0.00 40.80 5.69
275 276 0.173708 ATCTCGTTCCTCGTTCTGCC 59.826 55.000 0.00 0.00 40.80 4.85
276 277 1.551145 GATCTCGTTCCTCGTTCTGC 58.449 55.000 0.00 0.00 40.80 4.26
277 278 1.397343 TCGATCTCGTTCCTCGTTCTG 59.603 52.381 0.00 0.00 40.80 3.02
278 279 1.666700 CTCGATCTCGTTCCTCGTTCT 59.333 52.381 0.00 0.00 40.80 3.01
279 280 1.856807 GCTCGATCTCGTTCCTCGTTC 60.857 57.143 0.00 0.00 40.80 3.95
280 281 0.099082 GCTCGATCTCGTTCCTCGTT 59.901 55.000 0.00 0.00 40.80 3.85
281 282 1.025113 TGCTCGATCTCGTTCCTCGT 61.025 55.000 0.00 0.00 40.80 4.18
282 283 0.316607 CTGCTCGATCTCGTTCCTCG 60.317 60.000 0.00 0.00 40.80 4.63
283 284 0.030101 CCTGCTCGATCTCGTTCCTC 59.970 60.000 0.00 0.00 40.80 3.71
284 285 0.394488 TCCTGCTCGATCTCGTTCCT 60.394 55.000 0.00 0.00 40.80 3.36
285 286 0.456221 TTCCTGCTCGATCTCGTTCC 59.544 55.000 0.00 0.00 40.80 3.62
286 287 1.535015 CCTTCCTGCTCGATCTCGTTC 60.535 57.143 0.00 0.00 40.80 3.95
287 288 0.457851 CCTTCCTGCTCGATCTCGTT 59.542 55.000 0.00 0.00 40.80 3.85
288 289 2.010582 GCCTTCCTGCTCGATCTCGT 62.011 60.000 0.00 0.00 40.80 4.18
289 290 1.299773 GCCTTCCTGCTCGATCTCG 60.300 63.158 0.00 0.00 41.45 4.04
290 291 1.299773 CGCCTTCCTGCTCGATCTC 60.300 63.158 0.00 0.00 0.00 2.75
291 292 2.790791 CCGCCTTCCTGCTCGATCT 61.791 63.158 0.00 0.00 0.00 2.75
292 293 2.279784 CCGCCTTCCTGCTCGATC 60.280 66.667 0.00 0.00 0.00 3.69
293 294 2.185310 AAACCGCCTTCCTGCTCGAT 62.185 55.000 0.00 0.00 0.00 3.59
294 295 2.391724 AAAACCGCCTTCCTGCTCGA 62.392 55.000 0.00 0.00 0.00 4.04
295 296 1.912371 GAAAACCGCCTTCCTGCTCG 61.912 60.000 0.00 0.00 0.00 5.03
296 297 1.587043 GGAAAACCGCCTTCCTGCTC 61.587 60.000 2.17 0.00 39.49 4.26
297 298 1.603739 GGAAAACCGCCTTCCTGCT 60.604 57.895 2.17 0.00 39.49 4.24
298 299 1.460273 TTGGAAAACCGCCTTCCTGC 61.460 55.000 9.09 0.00 42.52 4.85
299 300 0.313987 GTTGGAAAACCGCCTTCCTG 59.686 55.000 9.09 0.00 42.52 3.86
300 301 1.170290 CGTTGGAAAACCGCCTTCCT 61.170 55.000 9.09 0.00 42.52 3.36
301 302 1.284715 CGTTGGAAAACCGCCTTCC 59.715 57.895 2.38 2.38 42.41 3.46
302 303 1.069703 GTACGTTGGAAAACCGCCTTC 60.070 52.381 0.00 0.00 0.00 3.46
303 304 0.946528 GTACGTTGGAAAACCGCCTT 59.053 50.000 0.00 0.00 0.00 4.35
304 305 1.223417 CGTACGTTGGAAAACCGCCT 61.223 55.000 7.22 0.00 0.00 5.52
305 306 1.204813 CGTACGTTGGAAAACCGCC 59.795 57.895 7.22 0.00 0.00 6.13
306 307 1.204813 CCGTACGTTGGAAAACCGC 59.795 57.895 15.21 0.00 0.00 5.68
307 308 1.431496 ATCCGTACGTTGGAAAACCG 58.569 50.000 15.21 0.00 39.39 4.44
308 309 2.349580 GCTATCCGTACGTTGGAAAACC 59.650 50.000 15.21 0.00 39.39 3.27
309 310 3.256558 AGCTATCCGTACGTTGGAAAAC 58.743 45.455 15.21 5.84 39.39 2.43
310 311 3.598019 AGCTATCCGTACGTTGGAAAA 57.402 42.857 15.21 4.56 39.39 2.29
311 312 3.598019 AAGCTATCCGTACGTTGGAAA 57.402 42.857 15.21 0.00 39.39 3.13
312 313 3.489738 GCTAAGCTATCCGTACGTTGGAA 60.490 47.826 15.21 3.26 39.39 3.53
313 314 2.033801 GCTAAGCTATCCGTACGTTGGA 59.966 50.000 15.21 11.15 40.46 3.53
314 315 2.391879 GCTAAGCTATCCGTACGTTGG 58.608 52.381 15.21 4.54 0.00 3.77
315 316 2.391879 GGCTAAGCTATCCGTACGTTG 58.608 52.381 15.21 0.00 0.00 4.10
316 317 1.339291 GGGCTAAGCTATCCGTACGTT 59.661 52.381 15.21 3.79 0.00 3.99
317 318 0.957362 GGGCTAAGCTATCCGTACGT 59.043 55.000 15.21 0.00 0.00 3.57
318 319 0.243095 GGGGCTAAGCTATCCGTACG 59.757 60.000 8.69 8.69 0.00 3.67
319 320 1.272769 CAGGGGCTAAGCTATCCGTAC 59.727 57.143 0.00 0.00 0.00 3.67
320 321 1.629043 CAGGGGCTAAGCTATCCGTA 58.371 55.000 0.00 0.00 0.00 4.02
321 322 1.122019 CCAGGGGCTAAGCTATCCGT 61.122 60.000 0.00 0.00 0.00 4.69
322 323 1.122019 ACCAGGGGCTAAGCTATCCG 61.122 60.000 0.00 0.00 0.00 4.18
323 324 0.687920 GACCAGGGGCTAAGCTATCC 59.312 60.000 0.00 0.00 0.00 2.59
324 325 1.070914 GTGACCAGGGGCTAAGCTATC 59.929 57.143 0.00 0.00 0.00 2.08
325 326 1.132500 GTGACCAGGGGCTAAGCTAT 58.868 55.000 0.00 0.00 0.00 2.97
326 327 1.327690 CGTGACCAGGGGCTAAGCTA 61.328 60.000 0.00 0.00 0.00 3.32
327 328 2.660064 CGTGACCAGGGGCTAAGCT 61.660 63.158 0.00 0.00 0.00 3.74
328 329 2.125106 CGTGACCAGGGGCTAAGC 60.125 66.667 0.00 0.00 0.00 3.09
329 330 0.391263 GTTCGTGACCAGGGGCTAAG 60.391 60.000 0.00 0.00 0.00 2.18
330 331 1.675219 GTTCGTGACCAGGGGCTAA 59.325 57.895 0.00 0.00 0.00 3.09
331 332 2.642254 CGTTCGTGACCAGGGGCTA 61.642 63.158 0.00 0.00 0.00 3.93
332 333 4.003788 CGTTCGTGACCAGGGGCT 62.004 66.667 0.00 0.00 0.00 5.19
333 334 4.309950 ACGTTCGTGACCAGGGGC 62.310 66.667 0.00 0.00 0.00 5.80
334 335 2.357034 CACGTTCGTGACCAGGGG 60.357 66.667 18.64 0.00 38.30 4.79
335 336 3.041940 GCACGTTCGTGACCAGGG 61.042 66.667 25.87 1.39 38.30 4.45
336 337 1.626654 GATGCACGTTCGTGACCAGG 61.627 60.000 25.87 2.07 38.30 4.45
337 338 0.667487 AGATGCACGTTCGTGACCAG 60.667 55.000 25.87 2.75 38.30 4.00
338 339 0.599060 TAGATGCACGTTCGTGACCA 59.401 50.000 25.87 16.31 38.30 4.02
339 340 1.389106 GTTAGATGCACGTTCGTGACC 59.611 52.381 25.87 14.26 38.30 4.02
340 341 2.055838 TGTTAGATGCACGTTCGTGAC 58.944 47.619 25.87 17.53 38.30 3.67
341 342 2.425578 TGTTAGATGCACGTTCGTGA 57.574 45.000 25.87 13.02 38.30 4.35
342 343 2.475111 ACTTGTTAGATGCACGTTCGTG 59.525 45.455 19.03 19.03 38.98 4.35
343 344 2.475111 CACTTGTTAGATGCACGTTCGT 59.525 45.455 0.00 0.00 0.00 3.85
344 345 2.721797 GCACTTGTTAGATGCACGTTCG 60.722 50.000 0.00 0.00 39.23 3.95
345 346 2.480419 AGCACTTGTTAGATGCACGTTC 59.520 45.455 0.00 0.00 41.97 3.95
346 347 2.224079 CAGCACTTGTTAGATGCACGTT 59.776 45.455 0.00 0.00 41.97 3.99
347 348 1.800586 CAGCACTTGTTAGATGCACGT 59.199 47.619 0.00 0.00 41.97 4.49
348 349 1.464687 GCAGCACTTGTTAGATGCACG 60.465 52.381 0.00 0.00 41.97 5.34
349 350 1.808945 AGCAGCACTTGTTAGATGCAC 59.191 47.619 5.45 0.00 41.97 4.57
350 351 2.189594 AGCAGCACTTGTTAGATGCA 57.810 45.000 5.45 0.00 41.97 3.96
351 352 3.002791 TGTAGCAGCACTTGTTAGATGC 58.997 45.455 0.00 0.00 39.74 3.91
352 353 4.692625 ACTTGTAGCAGCACTTGTTAGATG 59.307 41.667 0.00 0.00 0.00 2.90
353 354 4.899502 ACTTGTAGCAGCACTTGTTAGAT 58.100 39.130 0.00 0.00 0.00 1.98
354 355 4.336889 ACTTGTAGCAGCACTTGTTAGA 57.663 40.909 0.00 0.00 0.00 2.10
355 356 4.389077 GGTACTTGTAGCAGCACTTGTTAG 59.611 45.833 0.00 0.00 0.00 2.34
356 357 4.202274 TGGTACTTGTAGCAGCACTTGTTA 60.202 41.667 8.38 0.00 0.00 2.41
357 358 3.139077 GGTACTTGTAGCAGCACTTGTT 58.861 45.455 0.00 0.00 0.00 2.83
358 359 2.104111 TGGTACTTGTAGCAGCACTTGT 59.896 45.455 8.38 0.00 0.00 3.16
359 360 2.480419 GTGGTACTTGTAGCAGCACTTG 59.520 50.000 12.19 0.00 37.11 3.16
360 361 2.104111 TGTGGTACTTGTAGCAGCACTT 59.896 45.455 12.19 0.00 39.89 3.16
361 362 1.691976 TGTGGTACTTGTAGCAGCACT 59.308 47.619 12.19 0.00 39.89 4.40
362 363 2.163818 TGTGGTACTTGTAGCAGCAC 57.836 50.000 12.19 5.40 39.69 4.40
363 364 2.158885 TGTTGTGGTACTTGTAGCAGCA 60.159 45.455 12.19 10.56 0.00 4.41
364 365 2.489971 TGTTGTGGTACTTGTAGCAGC 58.510 47.619 12.19 8.56 0.00 5.25
365 366 4.554723 GCTTTGTTGTGGTACTTGTAGCAG 60.555 45.833 12.19 1.94 0.00 4.24
366 367 3.314080 GCTTTGTTGTGGTACTTGTAGCA 59.686 43.478 8.38 8.38 0.00 3.49
367 368 3.606153 CGCTTTGTTGTGGTACTTGTAGC 60.606 47.826 3.33 3.33 0.00 3.58
368 369 3.059188 CCGCTTTGTTGTGGTACTTGTAG 60.059 47.826 0.00 0.00 33.25 2.74
369 370 2.873472 CCGCTTTGTTGTGGTACTTGTA 59.127 45.455 0.00 0.00 33.25 2.41
370 371 1.673920 CCGCTTTGTTGTGGTACTTGT 59.326 47.619 0.00 0.00 33.25 3.16
371 372 1.001815 CCCGCTTTGTTGTGGTACTTG 60.002 52.381 0.00 0.00 35.95 3.16
372 373 1.314730 CCCGCTTTGTTGTGGTACTT 58.685 50.000 0.00 0.00 35.95 2.24
373 374 1.170290 GCCCGCTTTGTTGTGGTACT 61.170 55.000 0.00 0.00 35.95 2.73
374 375 1.170290 AGCCCGCTTTGTTGTGGTAC 61.170 55.000 0.00 0.00 35.95 3.34
375 376 0.397187 TAGCCCGCTTTGTTGTGGTA 59.603 50.000 0.00 0.00 35.95 3.25
376 377 0.889186 CTAGCCCGCTTTGTTGTGGT 60.889 55.000 0.00 0.00 35.95 4.16
377 378 1.875963 CTAGCCCGCTTTGTTGTGG 59.124 57.895 0.00 0.00 37.35 4.17
378 379 1.210155 GCTAGCCCGCTTTGTTGTG 59.790 57.895 2.29 0.00 0.00 3.33
379 380 2.325082 CGCTAGCCCGCTTTGTTGT 61.325 57.895 9.66 0.00 0.00 3.32
380 381 1.970917 CTCGCTAGCCCGCTTTGTTG 61.971 60.000 9.66 0.00 0.00 3.33
381 382 1.741770 CTCGCTAGCCCGCTTTGTT 60.742 57.895 9.66 0.00 0.00 2.83
382 383 2.125512 CTCGCTAGCCCGCTTTGT 60.126 61.111 9.66 0.00 0.00 2.83
383 384 3.567797 GCTCGCTAGCCCGCTTTG 61.568 66.667 9.66 0.00 43.40 2.77
389 390 2.467946 TATAACGCGCTCGCTAGCCC 62.468 60.000 5.73 0.00 46.68 5.19
390 391 1.081641 TATAACGCGCTCGCTAGCC 60.082 57.895 5.73 0.00 46.68 3.93
391 392 1.335697 GGTATAACGCGCTCGCTAGC 61.336 60.000 5.73 4.06 45.86 3.42
392 393 0.040692 TGGTATAACGCGCTCGCTAG 60.041 55.000 5.73 0.29 39.84 3.42
393 394 0.381445 TTGGTATAACGCGCTCGCTA 59.619 50.000 5.73 0.00 39.84 4.26
394 395 0.458889 TTTGGTATAACGCGCTCGCT 60.459 50.000 5.73 0.00 39.84 4.93
395 396 0.314818 GTTTGGTATAACGCGCTCGC 60.315 55.000 5.73 3.90 39.84 5.03
396 397 0.299597 GGTTTGGTATAACGCGCTCG 59.700 55.000 5.73 0.00 42.43 5.03
496 504 0.322187 ATTTTTGGGGGACGTCGGAG 60.322 55.000 9.92 0.00 0.00 4.63
497 505 0.110869 AATTTTTGGGGGACGTCGGA 59.889 50.000 9.92 0.00 0.00 4.55
498 506 0.242555 CAATTTTTGGGGGACGTCGG 59.757 55.000 9.92 0.00 0.00 4.79
499 507 0.955905 ACAATTTTTGGGGGACGTCG 59.044 50.000 9.92 0.00 34.12 5.12
501 509 2.502130 ACAAACAATTTTTGGGGGACGT 59.498 40.909 13.81 0.00 33.92 4.34
503 511 6.037720 CAGTAAACAAACAATTTTTGGGGGAC 59.962 38.462 13.81 8.45 33.92 4.46
504 512 6.116126 CAGTAAACAAACAATTTTTGGGGGA 58.884 36.000 13.81 0.27 33.92 4.81
509 517 6.901357 GCTGAGCAGTAAACAAACAATTTTTG 59.099 34.615 0.00 9.92 35.64 2.44
512 544 5.906073 AGCTGAGCAGTAAACAAACAATTT 58.094 33.333 7.39 0.00 0.00 1.82
540 578 4.554363 CTACGACAGGCGCCGAGG 62.554 72.222 23.20 17.44 46.04 4.63
541 579 4.554363 CCTACGACAGGCGCCGAG 62.554 72.222 23.20 20.55 46.04 4.63
543 581 4.554363 CTCCTACGACAGGCGCCG 62.554 72.222 23.20 18.60 45.10 6.46
544 582 1.660560 TTACTCCTACGACAGGCGCC 61.661 60.000 21.89 21.89 45.10 6.53
545 583 0.384669 ATTACTCCTACGACAGGCGC 59.615 55.000 0.00 0.00 45.10 6.53
546 584 3.976793 TTATTACTCCTACGACAGGCG 57.023 47.619 0.00 0.00 45.10 5.52
547 585 6.979465 AGTAATTATTACTCCTACGACAGGC 58.021 40.000 11.45 0.00 42.62 4.85
560 598 9.694137 AGCAAGTAATCTCCGAGTAATTATTAC 57.306 33.333 6.99 6.99 36.38 1.89
595 633 4.891727 GACGGACGCGATGGGCAT 62.892 66.667 15.93 0.00 43.84 4.40
688 731 3.209097 CGGCCCATAAAGGTGGCG 61.209 66.667 0.00 0.00 46.31 5.69
689 732 1.823899 CTCGGCCCATAAAGGTGGC 60.824 63.158 0.00 0.00 44.59 5.01
704 749 1.499049 GAAGTTTATAGCCCGGCTCG 58.501 55.000 17.40 0.00 40.44 5.03
726 784 1.821136 GCCAAGATGGTTTGGGAGAAG 59.179 52.381 6.88 0.00 46.23 2.85
729 787 1.928868 AAGCCAAGATGGTTTGGGAG 58.071 50.000 6.88 0.00 46.23 4.30
744 802 2.484594 GCTAGGTGGAGAGATCAAAGCC 60.485 54.545 0.00 0.00 0.00 4.35
761 819 0.179000 GTGGTGTGGGAGATGGCTAG 59.821 60.000 0.00 0.00 0.00 3.42
762 820 0.252696 AGTGGTGTGGGAGATGGCTA 60.253 55.000 0.00 0.00 0.00 3.93
763 821 1.136329 AAGTGGTGTGGGAGATGGCT 61.136 55.000 0.00 0.00 0.00 4.75
764 822 0.251341 AAAGTGGTGTGGGAGATGGC 60.251 55.000 0.00 0.00 0.00 4.40
765 823 1.614317 GGAAAGTGGTGTGGGAGATGG 60.614 57.143 0.00 0.00 0.00 3.51
767 825 1.630878 GAGGAAAGTGGTGTGGGAGAT 59.369 52.381 0.00 0.00 0.00 2.75
768 826 1.056660 GAGGAAAGTGGTGTGGGAGA 58.943 55.000 0.00 0.00 0.00 3.71
769 827 1.002544 GAGAGGAAAGTGGTGTGGGAG 59.997 57.143 0.00 0.00 0.00 4.30
770 828 1.056660 GAGAGGAAAGTGGTGTGGGA 58.943 55.000 0.00 0.00 0.00 4.37
771 829 1.002544 GAGAGAGGAAAGTGGTGTGGG 59.997 57.143 0.00 0.00 0.00 4.61
772 830 1.974236 AGAGAGAGGAAAGTGGTGTGG 59.026 52.381 0.00 0.00 0.00 4.17
773 831 2.289320 CCAGAGAGAGGAAAGTGGTGTG 60.289 54.545 0.00 0.00 0.00 3.82
774 832 1.974236 CCAGAGAGAGGAAAGTGGTGT 59.026 52.381 0.00 0.00 0.00 4.16
775 833 2.233431 CTCCAGAGAGAGGAAAGTGGTG 59.767 54.545 0.00 0.00 43.39 4.17
776 834 2.534990 CTCCAGAGAGAGGAAAGTGGT 58.465 52.381 0.00 0.00 43.39 4.16
804 862 4.834453 CTGGCTGGCTGCTCGGAG 62.834 72.222 16.14 0.00 42.39 4.63
835 893 2.975799 GAAGCCAACCAACCGCGA 60.976 61.111 8.23 0.00 0.00 5.87
860 923 2.116125 GGTCTGGTGGCTTTGGCT 59.884 61.111 0.00 0.00 38.73 4.75
862 925 3.365265 GCGGTCTGGTGGCTTTGG 61.365 66.667 0.00 0.00 0.00 3.28
863 926 3.365265 GGCGGTCTGGTGGCTTTG 61.365 66.667 0.00 0.00 0.00 2.77
864 927 4.660938 GGGCGGTCTGGTGGCTTT 62.661 66.667 0.00 0.00 0.00 3.51
868 931 4.278513 TTTGGGGCGGTCTGGTGG 62.279 66.667 0.00 0.00 0.00 4.61
869 932 2.672996 CTTTGGGGCGGTCTGGTG 60.673 66.667 0.00 0.00 0.00 4.17
870 933 4.660938 GCTTTGGGGCGGTCTGGT 62.661 66.667 0.00 0.00 0.00 4.00
871 934 4.659172 TGCTTTGGGGCGGTCTGG 62.659 66.667 0.00 0.00 34.52 3.86
872 935 3.058160 CTGCTTTGGGGCGGTCTG 61.058 66.667 0.00 0.00 34.21 3.51
873 936 2.351924 TTTCTGCTTTGGGGCGGTCT 62.352 55.000 0.00 0.00 39.41 3.85
874 937 1.460273 TTTTCTGCTTTGGGGCGGTC 61.460 55.000 0.00 0.00 39.41 4.79
875 938 1.456705 TTTTCTGCTTTGGGGCGGT 60.457 52.632 0.00 0.00 39.41 5.68
876 939 1.290009 CTTTTCTGCTTTGGGGCGG 59.710 57.895 0.00 0.00 39.72 6.13
877 940 1.373371 GCTTTTCTGCTTTGGGGCG 60.373 57.895 0.00 0.00 34.52 6.13
878 941 1.203287 CTAGCTTTTCTGCTTTGGGGC 59.797 52.381 0.00 0.00 43.74 5.80
879 942 1.203287 GCTAGCTTTTCTGCTTTGGGG 59.797 52.381 7.70 0.00 43.74 4.96
880 943 2.165998 AGCTAGCTTTTCTGCTTTGGG 58.834 47.619 12.68 0.00 43.74 4.12
915 978 1.427592 CTTGCTTGCTCTAGAGGCGC 61.428 60.000 21.23 8.64 0.00 6.53
948 1015 2.319844 TGGCAGATCGACCACTGATAT 58.680 47.619 16.62 0.00 36.38 1.63
949 1016 1.775385 TGGCAGATCGACCACTGATA 58.225 50.000 16.62 5.07 36.38 2.15
951 1018 0.461548 GATGGCAGATCGACCACTGA 59.538 55.000 16.62 1.64 39.19 3.41
952 1019 0.463204 AGATGGCAGATCGACCACTG 59.537 55.000 11.41 10.45 39.19 3.66
953 1020 0.463204 CAGATGGCAGATCGACCACT 59.537 55.000 11.41 8.49 39.19 4.00
954 1021 1.156645 GCAGATGGCAGATCGACCAC 61.157 60.000 11.41 6.69 43.97 4.16
955 1022 1.144716 GCAGATGGCAGATCGACCA 59.855 57.895 11.55 11.55 43.97 4.02
956 1023 4.040068 GCAGATGGCAGATCGACC 57.960 61.111 0.00 0.40 43.97 4.79
965 1032 2.580470 CGACGACGATGCAGATGGC 61.580 63.158 0.00 0.00 42.66 4.40
967 1034 1.524179 CGACGACGACGATGCAGATG 61.524 60.000 15.32 0.00 42.66 2.90
968 1035 1.297672 CGACGACGACGATGCAGAT 60.298 57.895 15.32 0.00 42.66 2.90
969 1036 2.097728 CGACGACGACGATGCAGA 59.902 61.111 15.32 0.00 42.66 4.26
970 1037 2.202311 ACGACGACGACGATGCAG 60.202 61.111 25.15 2.87 42.66 4.41
971 1038 2.202260 GACGACGACGACGATGCA 60.202 61.111 25.15 0.00 42.66 3.96
984 1054 0.041224 GCATCTATCTGCGTCGACGA 60.041 55.000 39.74 23.16 43.02 4.20
1018 1088 2.167281 CCGGAGAAGAAGAGCAAGATGA 59.833 50.000 0.00 0.00 0.00 2.92
1019 1089 2.093764 ACCGGAGAAGAAGAGCAAGATG 60.094 50.000 9.46 0.00 0.00 2.90
1020 1090 2.093764 CACCGGAGAAGAAGAGCAAGAT 60.094 50.000 9.46 0.00 0.00 2.40
1025 1104 1.219393 CCCACCGGAGAAGAAGAGC 59.781 63.158 9.46 0.00 0.00 4.09
1112 1203 3.402681 CCATGGGACGAGGGCAGT 61.403 66.667 2.85 0.00 0.00 4.40
1198 1289 1.002888 CAGAAAGCTGAGAGAGGCCAA 59.997 52.381 5.01 0.00 45.17 4.52
1286 1384 1.278127 ACTGCACACTACGCCCTAATT 59.722 47.619 0.00 0.00 0.00 1.40
1288 1386 1.475280 CTACTGCACACTACGCCCTAA 59.525 52.381 0.00 0.00 0.00 2.69
1290 1388 0.898789 ACTACTGCACACTACGCCCT 60.899 55.000 0.00 0.00 0.00 5.19
1291 1389 0.813184 TACTACTGCACACTACGCCC 59.187 55.000 0.00 0.00 0.00 6.13
1292 1390 1.202268 CCTACTACTGCACACTACGCC 60.202 57.143 0.00 0.00 0.00 5.68
1293 1391 1.741706 TCCTACTACTGCACACTACGC 59.258 52.381 0.00 0.00 0.00 4.42
1295 1393 3.381908 AGCATCCTACTACTGCACACTAC 59.618 47.826 0.00 0.00 38.37 2.73
1296 1394 3.632333 AGCATCCTACTACTGCACACTA 58.368 45.455 0.00 0.00 38.37 2.74
1297 1395 2.461695 AGCATCCTACTACTGCACACT 58.538 47.619 0.00 0.00 38.37 3.55
1298 1396 2.969628 AGCATCCTACTACTGCACAC 57.030 50.000 0.00 0.00 38.37 3.82
1299 1397 4.023980 AGTAAGCATCCTACTACTGCACA 58.976 43.478 0.00 0.00 38.37 4.57
1300 1398 4.098044 TCAGTAAGCATCCTACTACTGCAC 59.902 45.833 3.71 0.00 38.37 4.57
1301 1399 4.098044 GTCAGTAAGCATCCTACTACTGCA 59.902 45.833 3.71 0.00 38.37 4.41
1302 1400 4.339814 AGTCAGTAAGCATCCTACTACTGC 59.660 45.833 3.71 0.00 36.01 4.40
1303 1401 7.283580 ACTTAGTCAGTAAGCATCCTACTACTG 59.716 40.741 0.00 2.38 41.89 2.74
1304 1402 7.348033 ACTTAGTCAGTAAGCATCCTACTACT 58.652 38.462 0.00 0.00 41.89 2.57
1305 1403 7.571080 ACTTAGTCAGTAAGCATCCTACTAC 57.429 40.000 0.00 0.00 41.89 2.73
1306 1404 9.118300 GTTACTTAGTCAGTAAGCATCCTACTA 57.882 37.037 0.00 0.00 46.72 1.82
1307 1405 7.835181 AGTTACTTAGTCAGTAAGCATCCTACT 59.165 37.037 0.00 0.00 46.72 2.57
1308 1406 7.998580 AGTTACTTAGTCAGTAAGCATCCTAC 58.001 38.462 0.00 0.00 46.72 3.18
1309 1407 9.863650 ATAGTTACTTAGTCAGTAAGCATCCTA 57.136 33.333 0.00 0.00 46.72 2.94
1310 1408 8.770010 ATAGTTACTTAGTCAGTAAGCATCCT 57.230 34.615 0.00 0.00 46.72 3.24
1311 1409 9.250624 CAATAGTTACTTAGTCAGTAAGCATCC 57.749 37.037 0.00 0.00 46.72 3.51
1314 1412 7.837863 AGCAATAGTTACTTAGTCAGTAAGCA 58.162 34.615 0.00 0.00 46.72 3.91
1324 1422 9.383519 TGAATTGAAGGAGCAATAGTTACTTAG 57.616 33.333 0.00 0.00 37.50 2.18
1332 1430 3.949754 TGGCTGAATTGAAGGAGCAATAG 59.050 43.478 0.00 0.00 37.50 1.73
1352 1450 3.855379 CAGAAATTCGTGAACATGCATGG 59.145 43.478 29.41 12.19 0.00 3.66
1361 1460 4.380531 AGAAGTGAGCAGAAATTCGTGAA 58.619 39.130 0.00 0.00 0.00 3.18
1434 1533 1.335882 CCTTCCCGGGGTTACTCTCC 61.336 65.000 23.50 0.00 0.00 3.71
1444 1543 3.771160 CACGTCCTCCTTCCCGGG 61.771 72.222 16.85 16.85 0.00 5.73
1508 1610 4.643387 ACCAGAACAGCGTGCCCC 62.643 66.667 0.00 0.00 0.00 5.80
1511 1613 1.954146 TCGAACCAGAACAGCGTGC 60.954 57.895 0.00 0.00 0.00 5.34
1727 1832 2.745884 TGGCGGCATCACTTTCGG 60.746 61.111 7.97 0.00 0.00 4.30
1766 1871 4.479993 CTTCCTGCTCCTGGGCCG 62.480 72.222 0.00 0.00 0.00 6.13
1777 1882 1.001641 CAACCCTGGCCTCTTCCTG 60.002 63.158 3.32 0.00 0.00 3.86
1779 1884 1.002011 GTCAACCCTGGCCTCTTCC 60.002 63.158 3.32 0.00 0.00 3.46
1837 1942 0.106708 TTCTGCCGATACCCATCAGC 59.893 55.000 0.00 0.00 35.49 4.26
1839 1944 1.072173 CCATTCTGCCGATACCCATCA 59.928 52.381 0.00 0.00 0.00 3.07
1922 2027 2.822764 ACGAACGGAATGGAATCTAGC 58.177 47.619 0.00 0.00 0.00 3.42
1933 2038 0.379669 GAGCGAGGATACGAACGGAA 59.620 55.000 0.00 0.00 46.39 4.30
1935 2040 0.591741 GTGAGCGAGGATACGAACGG 60.592 60.000 0.00 0.00 46.39 4.44
1941 2046 4.929808 TGAAAAAGAAGTGAGCGAGGATAC 59.070 41.667 0.00 0.00 0.00 2.24
1945 2050 2.224314 GGTGAAAAAGAAGTGAGCGAGG 59.776 50.000 0.00 0.00 0.00 4.63
1965 2070 0.318441 TCAAGCTGAGAAGTGACCGG 59.682 55.000 0.00 0.00 0.00 5.28
2003 2108 1.714794 CTCTGCAACCGTAGAGTTGG 58.285 55.000 6.55 0.00 44.46 3.77
2008 2113 0.898326 TGCCTCTCTGCAACCGTAGA 60.898 55.000 0.00 0.00 38.56 2.59
2009 2114 0.037326 TTGCCTCTCTGCAACCGTAG 60.037 55.000 0.00 0.00 45.77 3.51
2010 2115 2.054458 TTGCCTCTCTGCAACCGTA 58.946 52.632 0.00 0.00 45.77 4.02
2103 2208 1.074850 CTTCTCCTCCTCCTCCCCC 60.075 68.421 0.00 0.00 0.00 5.40
2104 2209 1.074850 CCTTCTCCTCCTCCTCCCC 60.075 68.421 0.00 0.00 0.00 4.81
2105 2210 1.764454 GCCTTCTCCTCCTCCTCCC 60.764 68.421 0.00 0.00 0.00 4.30
2106 2211 1.764454 GGCCTTCTCCTCCTCCTCC 60.764 68.421 0.00 0.00 0.00 4.30
2107 2212 2.131067 CGGCCTTCTCCTCCTCCTC 61.131 68.421 0.00 0.00 0.00 3.71
2108 2213 2.042435 CGGCCTTCTCCTCCTCCT 60.042 66.667 0.00 0.00 0.00 3.69
2109 2214 3.855853 GCGGCCTTCTCCTCCTCC 61.856 72.222 0.00 0.00 0.00 4.30
2110 2215 4.214327 CGCGGCCTTCTCCTCCTC 62.214 72.222 0.00 0.00 0.00 3.71
2127 2241 2.031465 TTCACGTCCGGAAAGCCC 59.969 61.111 5.23 0.00 0.00 5.19
2149 2263 3.716006 CGCGTGGCTGTTCACCAG 61.716 66.667 0.00 0.00 44.53 4.00
2223 2337 2.617538 TCCCCGTCCTCCTCCTCT 60.618 66.667 0.00 0.00 0.00 3.69
2473 2587 4.154195 GCAGTAAACAATCTGGTGTAGGTG 59.846 45.833 0.00 0.00 32.94 4.00
2482 2596 7.385752 ACAATCAATTTGGCAGTAAACAATCTG 59.614 33.333 0.00 0.00 39.80 2.90
2510 2628 6.151648 TGAGCAAATTCATCAGTTTTCCTAGG 59.848 38.462 0.82 0.82 0.00 3.02
2563 2687 9.813826 TTGATCTAGTAGAGGTGATGATGATAA 57.186 33.333 5.98 0.00 0.00 1.75
2719 2848 2.846039 AGGACTAGATAACGTGCGTG 57.154 50.000 0.00 0.00 0.00 5.34
3281 3422 3.966979 ACAACATGGCAGATCAATGGTA 58.033 40.909 0.00 0.00 0.00 3.25
3282 3423 2.811410 ACAACATGGCAGATCAATGGT 58.189 42.857 0.00 0.00 0.00 3.55
3294 3445 9.910511 GTATACAAGATTACGTTTACAACATGG 57.089 33.333 0.00 0.00 0.00 3.66
3348 3499 9.632807 GCACATTAACCAAGTTAATTAATCACA 57.367 29.630 9.45 0.00 43.46 3.58
3358 3509 4.759693 CCTCTGTGCACATTAACCAAGTTA 59.240 41.667 22.00 0.00 0.00 2.24
3361 3512 3.411446 TCCTCTGTGCACATTAACCAAG 58.589 45.455 22.00 6.03 0.00 3.61
3447 3615 2.736682 GGAACGCCATGAACGTCCG 61.737 63.158 13.07 0.48 44.30 4.79
3482 3650 2.766263 CCTGAACATCTGGTAGTGGCTA 59.234 50.000 0.00 0.00 31.65 3.93
3586 3754 3.536369 GCACGTACGTAAGAAATTCGTCG 60.536 47.826 22.34 4.86 43.62 5.12
3589 3757 3.957747 TGCACGTACGTAAGAAATTCG 57.042 42.857 22.34 6.40 43.62 3.34
3614 3782 7.496591 ACAAAAACTTTCAGAATGCATGAACAT 59.503 29.630 0.00 0.00 36.44 2.71
3643 3838 1.754226 AGACGGCTCTTCTTCTGATCC 59.246 52.381 0.00 0.00 0.00 3.36
3661 3858 1.984570 CCGGCTCAGGTCCTTGAGA 60.985 63.158 17.62 0.83 45.95 3.27
3970 4186 7.336176 AGGGAAGATAAGGTGAACGAAATAAAC 59.664 37.037 0.00 0.00 0.00 2.01
3971 4187 7.399634 AGGGAAGATAAGGTGAACGAAATAAA 58.600 34.615 0.00 0.00 0.00 1.40
3995 4215 8.067784 TGTCGCTACAACAATAAAAAGAGAAAG 58.932 33.333 0.00 0.00 30.91 2.62
4005 4227 8.399425 TCTTTTCTTTTGTCGCTACAACAATAA 58.601 29.630 2.84 0.00 45.18 1.40
4011 4233 7.589954 GCTTTATCTTTTCTTTTGTCGCTACAA 59.410 33.333 0.00 0.00 43.85 2.41
4038 4260 2.387185 CGTGTCTACGCAAACACTACA 58.613 47.619 11.48 0.00 44.11 2.74
4054 4276 2.030823 CGTTGCATGCATATTCTCGTGT 59.969 45.455 23.37 0.00 0.00 4.49
4064 4286 2.481919 CGAGTGCGTTGCATGCAT 59.518 55.556 23.37 4.78 42.74 3.96
4065 4287 3.725459 CCGAGTGCGTTGCATGCA 61.725 61.111 18.46 18.46 41.91 3.96
4067 4289 4.465512 GGCCGAGTGCGTTGCATG 62.466 66.667 0.00 0.00 41.91 4.06
4081 4303 3.428413 ACTAGTAGCTAGCTAGAGGCC 57.572 52.381 24.78 12.50 43.05 5.19
4164 4389 1.008424 CCGTCGTCATCCCATCTCG 60.008 63.158 0.00 0.00 0.00 4.04
4221 4446 0.898320 CCGGGCCGATCTCATCTTAT 59.102 55.000 30.79 0.00 0.00 1.73
4240 4465 1.154197 GCCCAACTACAAGACGGAAC 58.846 55.000 0.00 0.00 0.00 3.62
4301 4530 5.931146 CGATCCCAATATCTCTCTCTTTTGG 59.069 44.000 0.00 0.00 34.69 3.28
4302 4531 5.931146 CCGATCCCAATATCTCTCTCTTTTG 59.069 44.000 0.00 0.00 0.00 2.44
4328 4565 2.513897 GACATGGTACTGCCGCCC 60.514 66.667 0.00 0.00 41.21 6.13
4356 4593 0.453793 TTGCTTTGGGTTGTGTCACG 59.546 50.000 0.00 0.00 0.00 4.35
4529 4770 1.074319 GTGACATGCATTTGCTGGCG 61.074 55.000 0.00 0.00 42.66 5.69
4530 4771 1.074319 CGTGACATGCATTTGCTGGC 61.074 55.000 0.00 2.92 42.66 4.85
4566 4807 5.689835 TGTGGCTATACATCCTTAAATGCA 58.310 37.500 0.00 0.00 0.00 3.96
4577 4818 2.639839 GGAGGGTGATGTGGCTATACAT 59.360 50.000 0.00 0.00 43.61 2.29
4578 4819 2.047061 GGAGGGTGATGTGGCTATACA 58.953 52.381 0.00 0.00 34.63 2.29
4580 4821 2.795291 AGGAGGGTGATGTGGCTATA 57.205 50.000 0.00 0.00 0.00 1.31
4581 4822 1.898863 AAGGAGGGTGATGTGGCTAT 58.101 50.000 0.00 0.00 0.00 2.97
4582 4823 1.668826 AAAGGAGGGTGATGTGGCTA 58.331 50.000 0.00 0.00 0.00 3.93
4583 4824 0.779997 AAAAGGAGGGTGATGTGGCT 59.220 50.000 0.00 0.00 0.00 4.75
4585 4826 1.355720 AGGAAAAGGAGGGTGATGTGG 59.644 52.381 0.00 0.00 0.00 4.17
4587 4828 3.903530 AAAGGAAAAGGAGGGTGATGT 57.096 42.857 0.00 0.00 0.00 3.06
4588 4829 4.835056 AGAAAAAGGAAAAGGAGGGTGATG 59.165 41.667 0.00 0.00 0.00 3.07
4589 4830 5.079998 AGAAAAAGGAAAAGGAGGGTGAT 57.920 39.130 0.00 0.00 0.00 3.06
4590 4831 4.536295 AGAAAAAGGAAAAGGAGGGTGA 57.464 40.909 0.00 0.00 0.00 4.02
4592 4833 3.388024 GCAAGAAAAAGGAAAAGGAGGGT 59.612 43.478 0.00 0.00 0.00 4.34
4629 4871 3.250744 CGAGACCGCTTTTTCTACATGA 58.749 45.455 0.00 0.00 0.00 3.07
4644 4889 2.775032 TAAAGTGTGCGGGCGAGACC 62.775 60.000 0.00 0.00 37.93 3.85
4652 4897 2.614057 GGATCCAAGATAAAGTGTGCGG 59.386 50.000 6.95 0.00 0.00 5.69
4657 4906 3.806521 CGCAGAGGATCCAAGATAAAGTG 59.193 47.826 15.82 0.00 33.66 3.16
4681 4930 7.969536 ATACATAGCTTTTTCGCAGACATAT 57.030 32.000 0.00 0.00 34.32 1.78
4721 4972 0.687757 TCTTCCGACTGGCCATAGCT 60.688 55.000 5.51 0.00 39.73 3.32
4734 4985 0.597568 TTTGTTGCTGCCATCTTCCG 59.402 50.000 0.00 0.00 0.00 4.30
4742 4993 1.005748 GCCTCCTTTTGTTGCTGCC 60.006 57.895 0.00 0.00 0.00 4.85
4768 5019 6.419116 CACAATCAACGAGGAGATACTACATG 59.581 42.308 0.00 0.00 0.00 3.21
4771 5022 5.282510 CCACAATCAACGAGGAGATACTAC 58.717 45.833 0.00 0.00 0.00 2.73
4772 5023 4.341235 CCCACAATCAACGAGGAGATACTA 59.659 45.833 0.00 0.00 0.00 1.82
4773 5024 3.133003 CCCACAATCAACGAGGAGATACT 59.867 47.826 0.00 0.00 0.00 2.12
4833 5089 1.228552 AAATGGGTCGCCAGTTGCT 60.229 52.632 0.00 0.00 38.05 3.91
4836 5092 1.463674 GATGAAATGGGTCGCCAGTT 58.536 50.000 0.00 0.00 0.00 3.16
4837 5093 0.394352 GGATGAAATGGGTCGCCAGT 60.394 55.000 0.00 0.00 0.00 4.00
4838 5094 1.439353 CGGATGAAATGGGTCGCCAG 61.439 60.000 0.00 0.00 0.00 4.85
4839 5095 1.451207 CGGATGAAATGGGTCGCCA 60.451 57.895 0.00 0.00 0.00 5.69
4840 5096 1.451387 ACGGATGAAATGGGTCGCC 60.451 57.895 0.00 0.00 0.00 5.54
4841 5097 1.714899 CCACGGATGAAATGGGTCGC 61.715 60.000 0.00 0.00 0.00 5.19
4842 5098 1.714899 GCCACGGATGAAATGGGTCG 61.715 60.000 0.00 0.00 33.81 4.79
4843 5099 1.384222 GGCCACGGATGAAATGGGTC 61.384 60.000 0.00 0.00 33.81 4.46
4844 5100 1.379843 GGCCACGGATGAAATGGGT 60.380 57.895 0.00 0.00 33.81 4.51
4845 5101 2.127232 GGGCCACGGATGAAATGGG 61.127 63.158 4.39 0.00 33.81 4.00
4846 5102 2.480610 CGGGCCACGGATGAAATGG 61.481 63.158 4.39 0.00 39.42 3.16
4847 5103 3.110139 CGGGCCACGGATGAAATG 58.890 61.111 4.39 0.00 39.42 2.32
4857 5113 1.969589 ATCCAAACGAACGGGCCAC 60.970 57.895 4.39 0.00 0.00 5.01
4858 5114 1.969064 CATCCAAACGAACGGGCCA 60.969 57.895 4.39 0.00 0.00 5.36
4859 5115 2.696759 CCATCCAAACGAACGGGCC 61.697 63.158 0.00 0.00 0.00 5.80
4860 5116 1.673009 TCCATCCAAACGAACGGGC 60.673 57.895 0.00 0.00 0.00 6.13
4861 5117 1.632046 CGTCCATCCAAACGAACGGG 61.632 60.000 0.00 0.00 41.29 5.28
4862 5118 1.785321 CGTCCATCCAAACGAACGG 59.215 57.895 0.00 0.00 41.29 4.44
4863 5119 1.131826 GCGTCCATCCAAACGAACG 59.868 57.895 0.00 0.00 41.29 3.95
4864 5120 0.165944 CTGCGTCCATCCAAACGAAC 59.834 55.000 0.00 0.00 41.29 3.95
4865 5121 0.034198 TCTGCGTCCATCCAAACGAA 59.966 50.000 0.00 0.00 41.29 3.85
4866 5122 0.249120 ATCTGCGTCCATCCAAACGA 59.751 50.000 0.00 0.00 41.29 3.85
4867 5123 1.934589 TATCTGCGTCCATCCAAACG 58.065 50.000 0.00 0.00 41.68 3.60
4868 5124 4.695217 TTTTATCTGCGTCCATCCAAAC 57.305 40.909 0.00 0.00 0.00 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.