Multiple sequence alignment - TraesCS3A01G039300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G039300 chr3A 100.000 4576 0 0 1 4576 20894601 20899176 0.000000e+00 8451.0
1 TraesCS3A01G039300 chr3A 86.159 1799 172 43 2259 4016 20835708 20837470 0.000000e+00 1871.0
2 TraesCS3A01G039300 chr3A 83.219 1460 189 41 2281 3729 20933810 20935224 0.000000e+00 1288.0
3 TraesCS3A01G039300 chr3A 85.764 1159 117 24 1000 2145 20834454 20835577 0.000000e+00 1182.0
4 TraesCS3A01G039300 chr3A 97.127 557 16 0 4020 4576 506463322 506463878 0.000000e+00 941.0
5 TraesCS3A01G039300 chr3A 96.036 555 22 0 4022 4576 704645286 704644732 0.000000e+00 904.0
6 TraesCS3A01G039300 chr3A 81.420 845 138 13 1050 1886 20931643 20932476 0.000000e+00 673.0
7 TraesCS3A01G039300 chr3A 96.226 53 2 0 542 594 20833055 20833107 2.270000e-13 87.9
8 TraesCS3A01G039300 chr3D 94.824 3265 122 19 784 4017 15374088 15370840 0.000000e+00 5049.0
9 TraesCS3A01G039300 chr3D 87.476 1589 150 28 2259 3833 15395965 15394412 0.000000e+00 1786.0
10 TraesCS3A01G039300 chr3D 84.638 1341 157 38 2288 3619 15348878 15347578 0.000000e+00 1290.0
11 TraesCS3A01G039300 chr3D 86.204 1167 121 20 982 2145 15397228 15396099 0.000000e+00 1227.0
12 TraesCS3A01G039300 chr3D 94.296 561 29 2 4017 4576 3961520 3962078 0.000000e+00 856.0
13 TraesCS3A01G039300 chr3D 88.384 198 15 2 530 727 15397633 15397444 9.900000e-57 231.0
14 TraesCS3A01G039300 chr3D 83.962 212 14 5 521 727 15374284 15374088 7.820000e-43 185.0
15 TraesCS3A01G039300 chr3D 84.177 158 21 4 265 419 600517977 600517821 2.850000e-32 150.0
16 TraesCS3A01G039300 chr3B 93.398 3393 158 37 674 4020 22510229 22513601 0.000000e+00 4964.0
17 TraesCS3A01G039300 chr3B 82.621 1473 197 36 2270 3732 22473335 22471912 0.000000e+00 1247.0
18 TraesCS3A01G039300 chr3B 82.349 1405 198 33 2270 3650 22345352 22343974 0.000000e+00 1175.0
19 TraesCS3A01G039300 chr3B 79.573 1170 185 27 1000 2145 22349056 22347917 0.000000e+00 787.0
20 TraesCS3A01G039300 chr3B 90.451 576 51 2 946 1521 22506502 22507073 0.000000e+00 756.0
21 TraesCS3A01G039300 chr3B 80.473 804 122 23 1049 1842 22523570 22524348 2.370000e-162 582.0
22 TraesCS3A01G039300 chr3B 85.787 394 29 16 547 929 22503253 22503630 4.290000e-105 392.0
23 TraesCS3A01G039300 chr3B 88.889 153 16 1 521 673 22509865 22510016 2.170000e-43 187.0
24 TraesCS3A01G039300 chr3B 84.021 194 13 8 848 1034 22502696 22502878 2.190000e-38 171.0
25 TraesCS3A01G039300 chr3B 92.174 115 8 1 546 660 22502588 22502701 1.320000e-35 161.0
26 TraesCS3A01G039300 chr3B 75.333 300 62 9 126 420 757868487 757868195 2.870000e-27 134.0
27 TraesCS3A01G039300 chr3B 76.812 207 18 12 550 745 22349520 22349333 6.310000e-14 89.8
28 TraesCS3A01G039300 chr5D 81.479 1474 210 43 2236 3677 558347269 558345827 0.000000e+00 1151.0
29 TraesCS3A01G039300 chr5D 79.114 790 129 19 1023 1785 558348797 558348017 3.160000e-141 512.0
30 TraesCS3A01G039300 chr6A 80.237 1351 212 38 2286 3605 528359723 528361049 0.000000e+00 965.0
31 TraesCS3A01G039300 chr1B 97.666 557 13 0 4020 4576 583905126 583904570 0.000000e+00 957.0
32 TraesCS3A01G039300 chr5A 96.820 566 15 2 4011 4576 606931924 606932486 0.000000e+00 942.0
33 TraesCS3A01G039300 chr2A 96.601 559 19 0 4018 4576 744984895 744985453 0.000000e+00 928.0
34 TraesCS3A01G039300 chr2A 95.187 561 23 2 4018 4576 776562323 776561765 0.000000e+00 883.0
35 TraesCS3A01G039300 chr2A 79.130 345 42 15 15 347 173797011 173797337 1.290000e-50 211.0
36 TraesCS3A01G039300 chr2A 75.667 300 47 15 126 419 174436621 174436342 4.810000e-25 126.0
37 TraesCS3A01G039300 chr4A 84.028 983 130 18 2663 3636 611269511 611268547 0.000000e+00 920.0
38 TraesCS3A01G039300 chr4A 95.707 559 24 0 4018 4576 641521570 641522128 0.000000e+00 900.0
39 TraesCS3A01G039300 chr7A 94.633 559 27 2 4018 4576 594468590 594469145 0.000000e+00 863.0
40 TraesCS3A01G039300 chr5B 81.262 1078 157 34 2631 3677 704302970 704304033 0.000000e+00 830.0
41 TraesCS3A01G039300 chr5B 79.099 799 131 18 1017 1785 704301328 704302120 6.790000e-143 518.0
42 TraesCS3A01G039300 chr5B 90.476 84 8 0 339 422 623152986 623152903 1.350000e-20 111.0
43 TraesCS3A01G039300 chr5B 90.476 84 8 0 339 422 626817910 626817827 1.350000e-20 111.0
44 TraesCS3A01G039300 chr7D 80.314 955 158 21 2663 3597 59415827 59416771 0.000000e+00 695.0
45 TraesCS3A01G039300 chr7D 83.761 117 17 2 1 115 223977653 223977769 4.840000e-20 110.0
46 TraesCS3A01G039300 chr4D 90.284 422 33 5 1 419 386498420 386498004 3.110000e-151 545.0
47 TraesCS3A01G039300 chr1A 82.589 224 36 3 208 429 516661465 516661687 1.300000e-45 195.0
48 TraesCS3A01G039300 chr1A 79.444 180 27 10 18 188 541434304 541434126 8.040000e-23 119.0
49 TraesCS3A01G039300 chr1A 82.353 119 17 3 1 115 127104737 127104855 2.910000e-17 100.0
50 TraesCS3A01G039300 chr2B 87.261 157 16 4 265 418 40304536 40304381 4.710000e-40 176.0
51 TraesCS3A01G039300 chr2D 84.177 158 21 4 265 419 22813374 22813530 2.850000e-32 150.0
52 TraesCS3A01G039300 chr2D 83.761 117 17 2 1 115 87590484 87590600 4.840000e-20 110.0
53 TraesCS3A01G039300 chr1D 83.636 110 16 2 1 108 481577504 481577613 8.100000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G039300 chr3A 20894601 20899176 4575 False 8451.000000 8451 100.000000 1 4576 1 chr3A.!!$F1 4575
1 TraesCS3A01G039300 chr3A 20833055 20837470 4415 False 1046.966667 1871 89.383000 542 4016 3 chr3A.!!$F3 3474
2 TraesCS3A01G039300 chr3A 20931643 20935224 3581 False 980.500000 1288 82.319500 1050 3729 2 chr3A.!!$F4 2679
3 TraesCS3A01G039300 chr3A 506463322 506463878 556 False 941.000000 941 97.127000 4020 4576 1 chr3A.!!$F2 556
4 TraesCS3A01G039300 chr3A 704644732 704645286 554 True 904.000000 904 96.036000 4022 4576 1 chr3A.!!$R1 554
5 TraesCS3A01G039300 chr3D 15370840 15374284 3444 True 2617.000000 5049 89.393000 521 4017 2 chr3D.!!$R3 3496
6 TraesCS3A01G039300 chr3D 15347578 15348878 1300 True 1290.000000 1290 84.638000 2288 3619 1 chr3D.!!$R1 1331
7 TraesCS3A01G039300 chr3D 15394412 15397633 3221 True 1081.333333 1786 87.354667 530 3833 3 chr3D.!!$R4 3303
8 TraesCS3A01G039300 chr3D 3961520 3962078 558 False 856.000000 856 94.296000 4017 4576 1 chr3D.!!$F1 559
9 TraesCS3A01G039300 chr3B 22471912 22473335 1423 True 1247.000000 1247 82.621000 2270 3732 1 chr3B.!!$R1 1462
10 TraesCS3A01G039300 chr3B 22502588 22513601 11013 False 1105.166667 4964 89.120000 521 4020 6 chr3B.!!$F2 3499
11 TraesCS3A01G039300 chr3B 22343974 22349520 5546 True 683.933333 1175 79.578000 550 3650 3 chr3B.!!$R3 3100
12 TraesCS3A01G039300 chr3B 22523570 22524348 778 False 582.000000 582 80.473000 1049 1842 1 chr3B.!!$F1 793
13 TraesCS3A01G039300 chr5D 558345827 558348797 2970 True 831.500000 1151 80.296500 1023 3677 2 chr5D.!!$R1 2654
14 TraesCS3A01G039300 chr6A 528359723 528361049 1326 False 965.000000 965 80.237000 2286 3605 1 chr6A.!!$F1 1319
15 TraesCS3A01G039300 chr1B 583904570 583905126 556 True 957.000000 957 97.666000 4020 4576 1 chr1B.!!$R1 556
16 TraesCS3A01G039300 chr5A 606931924 606932486 562 False 942.000000 942 96.820000 4011 4576 1 chr5A.!!$F1 565
17 TraesCS3A01G039300 chr2A 744984895 744985453 558 False 928.000000 928 96.601000 4018 4576 1 chr2A.!!$F2 558
18 TraesCS3A01G039300 chr2A 776561765 776562323 558 True 883.000000 883 95.187000 4018 4576 1 chr2A.!!$R2 558
19 TraesCS3A01G039300 chr4A 611268547 611269511 964 True 920.000000 920 84.028000 2663 3636 1 chr4A.!!$R1 973
20 TraesCS3A01G039300 chr4A 641521570 641522128 558 False 900.000000 900 95.707000 4018 4576 1 chr4A.!!$F1 558
21 TraesCS3A01G039300 chr7A 594468590 594469145 555 False 863.000000 863 94.633000 4018 4576 1 chr7A.!!$F1 558
22 TraesCS3A01G039300 chr5B 704301328 704304033 2705 False 674.000000 830 80.180500 1017 3677 2 chr5B.!!$F1 2660
23 TraesCS3A01G039300 chr7D 59415827 59416771 944 False 695.000000 695 80.314000 2663 3597 1 chr7D.!!$F1 934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 296 0.102844 CAAACAAGCCCACACCACAG 59.897 55.000 0.00 0.0 0.00 3.66 F
399 400 0.110328 TTCGCGAAGTCTCAGTCGAC 60.110 55.000 19.38 7.7 39.64 4.20 F
591 1411 0.464036 GATATGACTGGTGGCGGTGA 59.536 55.000 0.00 0.0 0.00 4.02 F
880 9454 2.310052 CCCACTCCCTTCTTTTCTCCAT 59.690 50.000 0.00 0.0 0.00 3.41 F
967 9548 2.357637 CTGGCCGAAGAAAAACAAGACA 59.642 45.455 0.00 0.0 0.00 3.41 F
968 9549 2.755655 TGGCCGAAGAAAAACAAGACAA 59.244 40.909 0.00 0.0 0.00 3.18 F
3152 15478 2.647299 TCTGGTACCCAACAATGTGGAT 59.353 45.455 10.07 0.0 41.65 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1824 10595 1.312815 AGAAGAAAAACGCTGCTGCT 58.687 45.000 14.03 0.0 36.97 4.24 R
2380 14634 1.065126 AGTTTGGCTATGAGCTGGACC 60.065 52.381 0.00 0.0 41.99 4.46 R
2757 15069 5.972382 GTGCTTATGTAAGTAGAGAAGTCCG 59.028 44.000 2.11 0.0 35.75 4.79 R
3082 15408 4.586001 AGAATGACAACACCAAAGCTGAAT 59.414 37.500 0.00 0.0 0.00 2.57 R
3152 15478 6.604396 ACATATCCAAGCAGATTGATGAAACA 59.396 34.615 0.00 0.0 41.83 2.83 R
3235 15604 5.499652 CGTCACACGCATTATTAGGTTGTAC 60.500 44.000 0.00 0.0 33.65 2.90 R
3962 16373 1.142870 CACCAAAACCACCTCCTCTCA 59.857 52.381 0.00 0.0 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.186996 GGAGTGACAAAAATGAAGAAGCA 57.813 39.130 0.00 0.00 0.00 3.91
23 24 5.218139 GGAGTGACAAAAATGAAGAAGCAG 58.782 41.667 0.00 0.00 0.00 4.24
24 25 5.009010 GGAGTGACAAAAATGAAGAAGCAGA 59.991 40.000 0.00 0.00 0.00 4.26
25 26 6.069684 AGTGACAAAAATGAAGAAGCAGAG 57.930 37.500 0.00 0.00 0.00 3.35
26 27 5.824624 AGTGACAAAAATGAAGAAGCAGAGA 59.175 36.000 0.00 0.00 0.00 3.10
27 28 6.017275 AGTGACAAAAATGAAGAAGCAGAGAG 60.017 38.462 0.00 0.00 0.00 3.20
28 29 5.118642 ACAAAAATGAAGAAGCAGAGAGC 57.881 39.130 0.00 0.00 46.19 4.09
37 38 4.613929 GCAGAGAGCAGGGTCTTG 57.386 61.111 2.15 4.80 44.79 3.02
38 39 1.978473 GCAGAGAGCAGGGTCTTGA 59.022 57.895 2.15 0.00 44.79 3.02
39 40 0.322975 GCAGAGAGCAGGGTCTTGAA 59.677 55.000 2.15 0.00 44.79 2.69
40 41 1.675415 GCAGAGAGCAGGGTCTTGAAG 60.675 57.143 2.15 0.00 44.79 3.02
41 42 1.898472 CAGAGAGCAGGGTCTTGAAGA 59.102 52.381 2.15 0.00 0.00 2.87
42 43 2.500910 CAGAGAGCAGGGTCTTGAAGAT 59.499 50.000 0.00 0.00 0.00 2.40
43 44 3.703556 CAGAGAGCAGGGTCTTGAAGATA 59.296 47.826 0.00 0.00 0.00 1.98
44 45 3.704061 AGAGAGCAGGGTCTTGAAGATAC 59.296 47.826 0.00 0.00 0.00 2.24
45 46 3.445008 AGAGCAGGGTCTTGAAGATACA 58.555 45.455 0.00 0.00 0.00 2.29
46 47 3.840666 AGAGCAGGGTCTTGAAGATACAA 59.159 43.478 0.00 0.00 0.00 2.41
47 48 4.287067 AGAGCAGGGTCTTGAAGATACAAA 59.713 41.667 0.00 0.00 0.00 2.83
48 49 5.045286 AGAGCAGGGTCTTGAAGATACAAAT 60.045 40.000 0.00 0.00 0.00 2.32
49 50 5.574188 AGCAGGGTCTTGAAGATACAAATT 58.426 37.500 0.00 0.00 0.00 1.82
50 51 6.012745 AGCAGGGTCTTGAAGATACAAATTT 58.987 36.000 0.00 0.00 0.00 1.82
51 52 7.175104 AGCAGGGTCTTGAAGATACAAATTTA 58.825 34.615 0.00 0.00 0.00 1.40
52 53 7.337942 AGCAGGGTCTTGAAGATACAAATTTAG 59.662 37.037 0.00 0.00 0.00 1.85
53 54 7.336931 GCAGGGTCTTGAAGATACAAATTTAGA 59.663 37.037 0.00 0.00 0.00 2.10
54 55 9.231297 CAGGGTCTTGAAGATACAAATTTAGAA 57.769 33.333 0.00 0.00 0.00 2.10
55 56 9.454859 AGGGTCTTGAAGATACAAATTTAGAAG 57.545 33.333 0.00 0.00 0.00 2.85
56 57 9.449719 GGGTCTTGAAGATACAAATTTAGAAGA 57.550 33.333 0.00 0.00 0.00 2.87
74 75 9.780186 TTTAGAAGAGAGATGATATGACGTAGA 57.220 33.333 0.00 0.00 0.00 2.59
75 76 7.905604 AGAAGAGAGATGATATGACGTAGAG 57.094 40.000 0.00 0.00 0.00 2.43
76 77 7.676004 AGAAGAGAGATGATATGACGTAGAGA 58.324 38.462 0.00 0.00 0.00 3.10
77 78 8.321353 AGAAGAGAGATGATATGACGTAGAGAT 58.679 37.037 0.00 0.00 0.00 2.75
78 79 8.492673 AAGAGAGATGATATGACGTAGAGATC 57.507 38.462 0.00 0.00 0.00 2.75
79 80 7.619965 AGAGAGATGATATGACGTAGAGATCA 58.380 38.462 6.78 6.78 0.00 2.92
80 81 7.549134 AGAGAGATGATATGACGTAGAGATCAC 59.451 40.741 6.53 0.00 29.75 3.06
81 82 7.394016 AGAGATGATATGACGTAGAGATCACT 58.606 38.462 6.53 0.00 29.75 3.41
82 83 7.334171 AGAGATGATATGACGTAGAGATCACTG 59.666 40.741 2.56 0.00 29.75 3.66
83 84 7.164803 AGATGATATGACGTAGAGATCACTGA 58.835 38.462 2.56 0.00 29.75 3.41
84 85 6.546972 TGATATGACGTAGAGATCACTGAC 57.453 41.667 2.56 0.00 0.00 3.51
85 86 6.055588 TGATATGACGTAGAGATCACTGACA 58.944 40.000 2.56 0.00 0.00 3.58
86 87 4.624336 ATGACGTAGAGATCACTGACAC 57.376 45.455 2.56 0.00 0.00 3.67
87 88 3.676093 TGACGTAGAGATCACTGACACT 58.324 45.455 2.56 0.00 0.00 3.55
88 89 3.437049 TGACGTAGAGATCACTGACACTG 59.563 47.826 2.56 0.00 0.00 3.66
89 90 3.676093 ACGTAGAGATCACTGACACTGA 58.324 45.455 2.56 0.00 0.00 3.41
90 91 4.072839 ACGTAGAGATCACTGACACTGAA 58.927 43.478 2.56 0.00 0.00 3.02
91 92 4.155099 ACGTAGAGATCACTGACACTGAAG 59.845 45.833 2.56 0.00 0.00 3.02
92 93 3.591196 AGAGATCACTGACACTGAAGC 57.409 47.619 0.00 0.00 0.00 3.86
93 94 2.896044 AGAGATCACTGACACTGAAGCA 59.104 45.455 0.00 0.00 0.00 3.91
94 95 3.514706 AGAGATCACTGACACTGAAGCAT 59.485 43.478 0.00 0.00 0.00 3.79
95 96 3.859443 AGATCACTGACACTGAAGCATC 58.141 45.455 0.00 0.00 0.00 3.91
96 97 3.260128 AGATCACTGACACTGAAGCATCA 59.740 43.478 0.00 0.00 0.00 3.07
106 107 2.698855 TGAAGCATCAGAGGGTTAGC 57.301 50.000 0.00 0.00 0.00 3.09
107 108 2.191400 TGAAGCATCAGAGGGTTAGCT 58.809 47.619 0.00 0.00 0.00 3.32
108 109 2.093288 TGAAGCATCAGAGGGTTAGCTG 60.093 50.000 0.00 0.00 31.88 4.24
109 110 1.577736 AGCATCAGAGGGTTAGCTGT 58.422 50.000 0.00 0.00 33.90 4.40
110 111 2.752030 AGCATCAGAGGGTTAGCTGTA 58.248 47.619 0.00 0.00 33.90 2.74
111 112 3.312890 AGCATCAGAGGGTTAGCTGTAT 58.687 45.455 0.00 0.00 33.90 2.29
112 113 3.070734 AGCATCAGAGGGTTAGCTGTATG 59.929 47.826 0.00 0.00 33.90 2.39
113 114 3.070159 GCATCAGAGGGTTAGCTGTATGA 59.930 47.826 0.00 0.00 33.90 2.15
114 115 4.443457 GCATCAGAGGGTTAGCTGTATGAA 60.443 45.833 0.00 0.00 33.90 2.57
115 116 5.674525 CATCAGAGGGTTAGCTGTATGAAA 58.325 41.667 0.00 0.00 33.90 2.69
116 117 5.086104 TCAGAGGGTTAGCTGTATGAAAC 57.914 43.478 0.00 0.00 33.90 2.78
117 118 4.530553 TCAGAGGGTTAGCTGTATGAAACA 59.469 41.667 0.00 0.00 36.42 2.83
118 119 5.189736 TCAGAGGGTTAGCTGTATGAAACAT 59.810 40.000 0.00 0.00 37.50 2.71
119 120 5.882557 CAGAGGGTTAGCTGTATGAAACATT 59.117 40.000 0.00 0.00 37.50 2.71
120 121 7.047891 CAGAGGGTTAGCTGTATGAAACATTA 58.952 38.462 0.00 0.00 37.50 1.90
121 122 7.225538 CAGAGGGTTAGCTGTATGAAACATTAG 59.774 40.741 0.00 0.00 37.50 1.73
122 123 7.125811 AGAGGGTTAGCTGTATGAAACATTAGA 59.874 37.037 0.00 0.00 37.50 2.10
123 124 7.275920 AGGGTTAGCTGTATGAAACATTAGAG 58.724 38.462 0.00 0.00 37.50 2.43
124 125 7.125811 AGGGTTAGCTGTATGAAACATTAGAGA 59.874 37.037 0.00 0.00 37.50 3.10
125 126 7.769044 GGGTTAGCTGTATGAAACATTAGAGAA 59.231 37.037 0.00 0.00 37.50 2.87
126 127 8.821894 GGTTAGCTGTATGAAACATTAGAGAAG 58.178 37.037 0.00 0.00 37.50 2.85
127 128 8.821894 GTTAGCTGTATGAAACATTAGAGAAGG 58.178 37.037 0.00 0.00 37.50 3.46
128 129 7.187824 AGCTGTATGAAACATTAGAGAAGGA 57.812 36.000 0.00 0.00 37.50 3.36
129 130 7.624549 AGCTGTATGAAACATTAGAGAAGGAA 58.375 34.615 0.00 0.00 37.50 3.36
130 131 7.550906 AGCTGTATGAAACATTAGAGAAGGAAC 59.449 37.037 0.00 0.00 37.50 3.62
131 132 7.464710 GCTGTATGAAACATTAGAGAAGGAACG 60.465 40.741 0.00 0.00 37.50 3.95
132 133 7.608153 TGTATGAAACATTAGAGAAGGAACGA 58.392 34.615 0.00 0.00 31.43 3.85
133 134 8.092068 TGTATGAAACATTAGAGAAGGAACGAA 58.908 33.333 0.00 0.00 31.43 3.85
134 135 7.602517 ATGAAACATTAGAGAAGGAACGAAG 57.397 36.000 0.00 0.00 0.00 3.79
135 136 6.755206 TGAAACATTAGAGAAGGAACGAAGA 58.245 36.000 0.00 0.00 0.00 2.87
136 137 7.214381 TGAAACATTAGAGAAGGAACGAAGAA 58.786 34.615 0.00 0.00 0.00 2.52
137 138 7.170998 TGAAACATTAGAGAAGGAACGAAGAAC 59.829 37.037 0.00 0.00 0.00 3.01
138 139 6.347859 ACATTAGAGAAGGAACGAAGAACT 57.652 37.500 0.00 0.00 0.00 3.01
139 140 6.159988 ACATTAGAGAAGGAACGAAGAACTG 58.840 40.000 0.00 0.00 0.00 3.16
140 141 3.669251 AGAGAAGGAACGAAGAACTGG 57.331 47.619 0.00 0.00 0.00 4.00
141 142 2.966516 AGAGAAGGAACGAAGAACTGGT 59.033 45.455 0.00 0.00 0.00 4.00
142 143 4.150359 AGAGAAGGAACGAAGAACTGGTA 58.850 43.478 0.00 0.00 0.00 3.25
143 144 4.218852 AGAGAAGGAACGAAGAACTGGTAG 59.781 45.833 0.00 0.00 0.00 3.18
144 145 4.150359 AGAAGGAACGAAGAACTGGTAGA 58.850 43.478 0.00 0.00 0.00 2.59
145 146 4.218852 AGAAGGAACGAAGAACTGGTAGAG 59.781 45.833 0.00 0.00 0.00 2.43
146 147 2.826725 AGGAACGAAGAACTGGTAGAGG 59.173 50.000 0.00 0.00 0.00 3.69
147 148 2.824341 GGAACGAAGAACTGGTAGAGGA 59.176 50.000 0.00 0.00 0.00 3.71
148 149 3.257624 GGAACGAAGAACTGGTAGAGGAA 59.742 47.826 0.00 0.00 0.00 3.36
149 150 4.081586 GGAACGAAGAACTGGTAGAGGAAT 60.082 45.833 0.00 0.00 0.00 3.01
150 151 4.457834 ACGAAGAACTGGTAGAGGAATG 57.542 45.455 0.00 0.00 0.00 2.67
151 152 4.087182 ACGAAGAACTGGTAGAGGAATGA 58.913 43.478 0.00 0.00 0.00 2.57
152 153 4.527038 ACGAAGAACTGGTAGAGGAATGAA 59.473 41.667 0.00 0.00 0.00 2.57
153 154 5.011738 ACGAAGAACTGGTAGAGGAATGAAA 59.988 40.000 0.00 0.00 0.00 2.69
154 155 5.578727 CGAAGAACTGGTAGAGGAATGAAAG 59.421 44.000 0.00 0.00 0.00 2.62
155 156 6.572509 CGAAGAACTGGTAGAGGAATGAAAGA 60.573 42.308 0.00 0.00 0.00 2.52
156 157 6.882768 AGAACTGGTAGAGGAATGAAAGAT 57.117 37.500 0.00 0.00 0.00 2.40
157 158 7.264294 AGAACTGGTAGAGGAATGAAAGATT 57.736 36.000 0.00 0.00 0.00 2.40
158 159 7.694093 AGAACTGGTAGAGGAATGAAAGATTT 58.306 34.615 0.00 0.00 0.00 2.17
159 160 8.166726 AGAACTGGTAGAGGAATGAAAGATTTT 58.833 33.333 0.00 0.00 0.00 1.82
160 161 7.929941 ACTGGTAGAGGAATGAAAGATTTTC 57.070 36.000 0.00 0.00 0.00 2.29
161 162 6.887002 ACTGGTAGAGGAATGAAAGATTTTCC 59.113 38.462 0.00 0.00 39.38 3.13
166 167 5.886960 AGGAATGAAAGATTTTCCTGTCG 57.113 39.130 2.77 0.00 45.79 4.35
167 168 5.316987 AGGAATGAAAGATTTTCCTGTCGT 58.683 37.500 2.77 0.00 45.79 4.34
168 169 5.770162 AGGAATGAAAGATTTTCCTGTCGTT 59.230 36.000 2.77 0.00 45.79 3.85
169 170 6.265422 AGGAATGAAAGATTTTCCTGTCGTTT 59.735 34.615 2.77 0.00 45.79 3.60
170 171 7.447238 AGGAATGAAAGATTTTCCTGTCGTTTA 59.553 33.333 2.77 0.00 45.79 2.01
171 172 7.750903 GGAATGAAAGATTTTCCTGTCGTTTAG 59.249 37.037 0.00 0.00 36.73 1.85
172 173 5.997385 TGAAAGATTTTCCTGTCGTTTAGC 58.003 37.500 0.00 0.00 0.00 3.09
173 174 5.763204 TGAAAGATTTTCCTGTCGTTTAGCT 59.237 36.000 0.00 0.00 0.00 3.32
174 175 6.932400 TGAAAGATTTTCCTGTCGTTTAGCTA 59.068 34.615 0.00 0.00 0.00 3.32
175 176 6.723131 AAGATTTTCCTGTCGTTTAGCTAC 57.277 37.500 0.00 0.00 0.00 3.58
176 177 5.790593 AGATTTTCCTGTCGTTTAGCTACA 58.209 37.500 0.00 0.00 0.00 2.74
177 178 5.869888 AGATTTTCCTGTCGTTTAGCTACAG 59.130 40.000 6.60 6.60 39.69 2.74
178 179 4.859304 TTTCCTGTCGTTTAGCTACAGA 57.141 40.909 13.95 2.02 41.73 3.41
179 180 4.859304 TTCCTGTCGTTTAGCTACAGAA 57.141 40.909 13.95 5.20 41.73 3.02
180 181 4.859304 TCCTGTCGTTTAGCTACAGAAA 57.141 40.909 13.95 0.00 41.73 2.52
181 182 5.401531 TCCTGTCGTTTAGCTACAGAAAT 57.598 39.130 13.95 0.00 41.73 2.17
182 183 5.168569 TCCTGTCGTTTAGCTACAGAAATG 58.831 41.667 13.95 4.18 41.73 2.32
183 184 5.047590 TCCTGTCGTTTAGCTACAGAAATGA 60.048 40.000 13.95 6.36 41.73 2.57
184 185 5.289675 CCTGTCGTTTAGCTACAGAAATGAG 59.710 44.000 13.95 0.00 41.73 2.90
185 186 4.625742 TGTCGTTTAGCTACAGAAATGAGC 59.374 41.667 0.00 0.00 32.61 4.26
186 187 4.033014 GTCGTTTAGCTACAGAAATGAGCC 59.967 45.833 0.00 0.00 36.87 4.70
187 188 4.081642 TCGTTTAGCTACAGAAATGAGCCT 60.082 41.667 0.00 0.00 36.87 4.58
188 189 4.631813 CGTTTAGCTACAGAAATGAGCCTT 59.368 41.667 0.00 0.00 36.87 4.35
189 190 5.810587 CGTTTAGCTACAGAAATGAGCCTTA 59.189 40.000 0.00 0.00 36.87 2.69
190 191 6.237861 CGTTTAGCTACAGAAATGAGCCTTAC 60.238 42.308 0.00 0.00 36.87 2.34
191 192 4.826274 AGCTACAGAAATGAGCCTTACA 57.174 40.909 0.00 0.00 36.87 2.41
192 193 5.365021 AGCTACAGAAATGAGCCTTACAT 57.635 39.130 0.00 0.00 36.87 2.29
193 194 5.749462 AGCTACAGAAATGAGCCTTACATT 58.251 37.500 0.00 0.00 39.25 2.71
194 195 6.183347 AGCTACAGAAATGAGCCTTACATTT 58.817 36.000 0.00 0.00 46.22 2.32
195 196 6.660949 AGCTACAGAAATGAGCCTTACATTTT 59.339 34.615 0.00 0.00 44.46 1.82
196 197 7.177392 AGCTACAGAAATGAGCCTTACATTTTT 59.823 33.333 0.00 0.00 44.46 1.94
223 224 2.663566 TTTTTGCGGCATCCATGGA 58.336 47.368 18.88 18.88 0.00 3.41
224 225 0.246086 TTTTTGCGGCATCCATGGAC 59.754 50.000 18.99 5.01 0.00 4.02
225 226 0.897401 TTTTGCGGCATCCATGGACA 60.897 50.000 18.99 7.31 0.00 4.02
226 227 1.314534 TTTGCGGCATCCATGGACAG 61.315 55.000 18.99 14.20 0.00 3.51
227 228 2.124570 GCGGCATCCATGGACAGT 60.125 61.111 18.99 0.00 0.00 3.55
228 229 2.475466 GCGGCATCCATGGACAGTG 61.475 63.158 18.99 13.26 0.00 3.66
229 230 1.221566 CGGCATCCATGGACAGTGA 59.778 57.895 18.99 0.00 0.00 3.41
230 231 0.812811 CGGCATCCATGGACAGTGAG 60.813 60.000 18.99 6.01 0.00 3.51
231 232 0.465097 GGCATCCATGGACAGTGAGG 60.465 60.000 18.99 0.00 0.00 3.86
232 233 0.465097 GCATCCATGGACAGTGAGGG 60.465 60.000 18.99 0.57 0.00 4.30
233 234 1.206878 CATCCATGGACAGTGAGGGA 58.793 55.000 18.99 0.00 0.00 4.20
234 235 1.140452 CATCCATGGACAGTGAGGGAG 59.860 57.143 18.99 0.00 0.00 4.30
235 236 0.618680 TCCATGGACAGTGAGGGAGG 60.619 60.000 11.44 0.00 0.00 4.30
236 237 0.911525 CCATGGACAGTGAGGGAGGT 60.912 60.000 5.56 0.00 0.00 3.85
237 238 1.622449 CCATGGACAGTGAGGGAGGTA 60.622 57.143 5.56 0.00 0.00 3.08
238 239 2.187958 CATGGACAGTGAGGGAGGTAA 58.812 52.381 0.00 0.00 0.00 2.85
239 240 2.409064 TGGACAGTGAGGGAGGTAAA 57.591 50.000 0.00 0.00 0.00 2.01
240 241 2.696775 TGGACAGTGAGGGAGGTAAAA 58.303 47.619 0.00 0.00 0.00 1.52
241 242 2.370849 TGGACAGTGAGGGAGGTAAAAC 59.629 50.000 0.00 0.00 0.00 2.43
242 243 2.370849 GGACAGTGAGGGAGGTAAAACA 59.629 50.000 0.00 0.00 0.00 2.83
243 244 3.557264 GGACAGTGAGGGAGGTAAAACAG 60.557 52.174 0.00 0.00 0.00 3.16
244 245 2.372172 ACAGTGAGGGAGGTAAAACAGG 59.628 50.000 0.00 0.00 0.00 4.00
245 246 2.372172 CAGTGAGGGAGGTAAAACAGGT 59.628 50.000 0.00 0.00 0.00 4.00
246 247 3.053826 AGTGAGGGAGGTAAAACAGGTT 58.946 45.455 0.00 0.00 0.00 3.50
247 248 3.072622 AGTGAGGGAGGTAAAACAGGTTC 59.927 47.826 0.00 0.00 0.00 3.62
248 249 3.050089 TGAGGGAGGTAAAACAGGTTCA 58.950 45.455 0.00 0.00 0.00 3.18
249 250 3.460340 TGAGGGAGGTAAAACAGGTTCAA 59.540 43.478 0.00 0.00 0.00 2.69
250 251 3.819337 GAGGGAGGTAAAACAGGTTCAAC 59.181 47.826 0.00 0.00 0.00 3.18
251 252 3.203487 AGGGAGGTAAAACAGGTTCAACA 59.797 43.478 0.00 0.00 0.00 3.33
252 253 3.955551 GGGAGGTAAAACAGGTTCAACAA 59.044 43.478 0.00 0.00 0.00 2.83
253 254 4.403113 GGGAGGTAAAACAGGTTCAACAAA 59.597 41.667 0.00 0.00 0.00 2.83
254 255 5.345702 GGAGGTAAAACAGGTTCAACAAAC 58.654 41.667 0.00 0.00 37.12 2.93
255 256 5.105675 GGAGGTAAAACAGGTTCAACAAACA 60.106 40.000 0.00 0.00 39.81 2.83
256 257 5.961272 AGGTAAAACAGGTTCAACAAACAG 58.039 37.500 0.00 0.00 39.81 3.16
257 258 5.712917 AGGTAAAACAGGTTCAACAAACAGA 59.287 36.000 0.00 0.00 39.81 3.41
258 259 5.803461 GGTAAAACAGGTTCAACAAACAGAC 59.197 40.000 0.00 0.00 39.81 3.51
259 260 5.461032 AAAACAGGTTCAACAAACAGACA 57.539 34.783 0.00 0.00 39.81 3.41
260 261 5.461032 AAACAGGTTCAACAAACAGACAA 57.539 34.783 0.00 0.00 39.81 3.18
261 262 4.434713 ACAGGTTCAACAAACAGACAAC 57.565 40.909 0.00 0.00 39.81 3.32
262 263 3.823873 ACAGGTTCAACAAACAGACAACA 59.176 39.130 0.00 0.00 39.81 3.33
263 264 4.165779 CAGGTTCAACAAACAGACAACAC 58.834 43.478 0.00 0.00 39.81 3.32
264 265 3.823873 AGGTTCAACAAACAGACAACACA 59.176 39.130 0.00 0.00 39.81 3.72
265 266 4.279671 AGGTTCAACAAACAGACAACACAA 59.720 37.500 0.00 0.00 39.81 3.33
266 267 4.985409 GGTTCAACAAACAGACAACACAAA 59.015 37.500 0.00 0.00 39.81 2.83
267 268 5.463724 GGTTCAACAAACAGACAACACAAAA 59.536 36.000 0.00 0.00 39.81 2.44
268 269 6.018669 GGTTCAACAAACAGACAACACAAAAA 60.019 34.615 0.00 0.00 39.81 1.94
287 288 3.971245 AAAGACAAACAAACAAGCCCA 57.029 38.095 0.00 0.00 0.00 5.36
288 289 2.959507 AGACAAACAAACAAGCCCAC 57.040 45.000 0.00 0.00 0.00 4.61
289 290 2.175202 AGACAAACAAACAAGCCCACA 58.825 42.857 0.00 0.00 0.00 4.17
290 291 2.094234 AGACAAACAAACAAGCCCACAC 60.094 45.455 0.00 0.00 0.00 3.82
291 292 1.066502 ACAAACAAACAAGCCCACACC 60.067 47.619 0.00 0.00 0.00 4.16
292 293 1.066573 CAAACAAACAAGCCCACACCA 60.067 47.619 0.00 0.00 0.00 4.17
293 294 0.534873 AACAAACAAGCCCACACCAC 59.465 50.000 0.00 0.00 0.00 4.16
294 295 0.613292 ACAAACAAGCCCACACCACA 60.613 50.000 0.00 0.00 0.00 4.17
295 296 0.102844 CAAACAAGCCCACACCACAG 59.897 55.000 0.00 0.00 0.00 3.66
296 297 1.042559 AAACAAGCCCACACCACAGG 61.043 55.000 0.00 0.00 0.00 4.00
301 302 4.974721 CCCACACCACAGGCCCAC 62.975 72.222 0.00 0.00 0.00 4.61
302 303 4.974721 CCACACCACAGGCCCACC 62.975 72.222 0.00 0.00 0.00 4.61
303 304 4.202574 CACACCACAGGCCCACCA 62.203 66.667 0.00 0.00 39.06 4.17
304 305 4.204028 ACACCACAGGCCCACCAC 62.204 66.667 0.00 0.00 39.06 4.16
318 319 3.306917 CCACCACGGGGAAATTTAAAC 57.693 47.619 12.96 0.00 38.05 2.01
319 320 2.028839 CCACCACGGGGAAATTTAAACC 60.029 50.000 12.96 0.00 38.05 3.27
320 321 2.028839 CACCACGGGGAAATTTAAACCC 60.029 50.000 12.96 12.78 42.58 4.11
321 322 2.249139 CCACGGGGAAATTTAAACCCA 58.751 47.619 19.46 0.00 44.87 4.51
322 323 2.633481 CCACGGGGAAATTTAAACCCAA 59.367 45.455 19.46 0.00 44.87 4.12
323 324 3.555377 CCACGGGGAAATTTAAACCCAAC 60.555 47.826 19.46 3.78 44.87 3.77
324 325 3.069729 CACGGGGAAATTTAAACCCAACA 59.930 43.478 19.46 0.00 44.87 3.33
325 326 3.322541 ACGGGGAAATTTAAACCCAACAG 59.677 43.478 19.46 9.55 44.87 3.16
326 327 3.322541 CGGGGAAATTTAAACCCAACAGT 59.677 43.478 19.46 0.00 44.87 3.55
327 328 4.637276 GGGGAAATTTAAACCCAACAGTG 58.363 43.478 16.32 0.00 44.87 3.66
328 329 4.345547 GGGGAAATTTAAACCCAACAGTGA 59.654 41.667 16.32 0.00 44.87 3.41
329 330 5.510690 GGGGAAATTTAAACCCAACAGTGAG 60.511 44.000 16.32 0.00 44.87 3.51
330 331 5.510690 GGGAAATTTAAACCCAACAGTGAGG 60.511 44.000 8.27 0.00 42.81 3.86
335 336 3.250847 CCCAACAGTGAGGGTGGT 58.749 61.111 14.79 0.00 40.34 4.16
336 337 1.228245 CCCAACAGTGAGGGTGGTG 60.228 63.158 14.79 0.00 40.34 4.17
337 338 1.705002 CCCAACAGTGAGGGTGGTGA 61.705 60.000 14.79 0.00 40.34 4.02
338 339 0.182537 CCAACAGTGAGGGTGGTGAA 59.817 55.000 0.00 0.00 34.25 3.18
339 340 1.409521 CCAACAGTGAGGGTGGTGAAA 60.410 52.381 0.00 0.00 34.25 2.69
340 341 1.676006 CAACAGTGAGGGTGGTGAAAC 59.324 52.381 0.00 0.00 34.25 2.78
341 342 0.179056 ACAGTGAGGGTGGTGAAACG 60.179 55.000 0.00 0.00 38.12 3.60
342 343 0.884704 CAGTGAGGGTGGTGAAACGG 60.885 60.000 0.00 0.00 38.12 4.44
343 344 1.599797 GTGAGGGTGGTGAAACGGG 60.600 63.158 0.00 0.00 38.12 5.28
344 345 2.671963 GAGGGTGGTGAAACGGGC 60.672 66.667 0.00 0.00 38.12 6.13
345 346 4.280019 AGGGTGGTGAAACGGGCC 62.280 66.667 0.00 0.00 38.12 5.80
346 347 4.280019 GGGTGGTGAAACGGGCCT 62.280 66.667 0.84 0.00 38.12 5.19
347 348 2.751688 GGTGGTGAAACGGGCCTA 59.248 61.111 0.84 0.00 38.12 3.93
348 349 1.073548 GGTGGTGAAACGGGCCTAA 59.926 57.895 0.84 0.00 38.12 2.69
349 350 0.323087 GGTGGTGAAACGGGCCTAAT 60.323 55.000 0.84 0.00 38.12 1.73
350 351 1.092348 GTGGTGAAACGGGCCTAATC 58.908 55.000 0.84 0.00 38.12 1.75
351 352 0.988832 TGGTGAAACGGGCCTAATCT 59.011 50.000 0.84 0.00 38.12 2.40
352 353 2.093341 GTGGTGAAACGGGCCTAATCTA 60.093 50.000 0.84 0.00 38.12 1.98
353 354 2.093341 TGGTGAAACGGGCCTAATCTAC 60.093 50.000 0.84 0.00 38.12 2.59
354 355 2.093341 GGTGAAACGGGCCTAATCTACA 60.093 50.000 0.84 0.00 38.12 2.74
355 356 2.934553 GTGAAACGGGCCTAATCTACAC 59.065 50.000 0.84 1.60 0.00 2.90
356 357 2.568062 TGAAACGGGCCTAATCTACACA 59.432 45.455 0.84 0.00 0.00 3.72
357 358 2.981859 AACGGGCCTAATCTACACAG 57.018 50.000 0.84 0.00 0.00 3.66
358 359 1.120530 ACGGGCCTAATCTACACAGG 58.879 55.000 0.84 0.00 0.00 4.00
359 360 0.393077 CGGGCCTAATCTACACAGGG 59.607 60.000 0.84 0.00 0.00 4.45
360 361 1.508256 GGGCCTAATCTACACAGGGT 58.492 55.000 0.84 0.00 0.00 4.34
361 362 1.141053 GGGCCTAATCTACACAGGGTG 59.859 57.143 0.84 0.00 39.75 4.61
362 363 2.116238 GGCCTAATCTACACAGGGTGA 58.884 52.381 2.98 0.00 36.96 4.02
363 364 2.158943 GGCCTAATCTACACAGGGTGAC 60.159 54.545 2.98 0.00 36.96 3.67
364 365 2.500098 GCCTAATCTACACAGGGTGACA 59.500 50.000 2.98 0.00 36.96 3.58
365 366 3.134804 GCCTAATCTACACAGGGTGACAT 59.865 47.826 2.98 0.00 36.96 3.06
366 367 4.740934 GCCTAATCTACACAGGGTGACATC 60.741 50.000 2.98 0.00 36.96 3.06
367 368 4.405680 CCTAATCTACACAGGGTGACATCA 59.594 45.833 2.98 0.00 36.96 3.07
368 369 4.478206 AATCTACACAGGGTGACATCAG 57.522 45.455 2.98 0.00 36.96 2.90
369 370 1.550524 TCTACACAGGGTGACATCAGC 59.449 52.381 2.98 2.38 43.14 4.26
375 376 4.192000 GGTGACATCAGCCGACTG 57.808 61.111 0.00 0.00 45.95 3.51
384 385 2.569134 AGCCGACTGAGACTTCGC 59.431 61.111 0.00 0.00 33.78 4.70
385 386 2.876645 GCCGACTGAGACTTCGCG 60.877 66.667 0.00 0.00 33.78 5.87
386 387 2.868196 CCGACTGAGACTTCGCGA 59.132 61.111 3.71 3.71 33.78 5.87
387 388 1.209383 CCGACTGAGACTTCGCGAA 59.791 57.895 22.01 22.01 33.78 4.70
388 389 0.794981 CCGACTGAGACTTCGCGAAG 60.795 60.000 39.55 39.55 43.79 3.79
397 398 2.631303 CTTCGCGAAGTCTCAGTCG 58.369 57.895 34.97 12.16 40.24 4.18
398 399 0.166161 CTTCGCGAAGTCTCAGTCGA 59.834 55.000 34.97 4.60 39.64 4.20
399 400 0.110328 TTCGCGAAGTCTCAGTCGAC 60.110 55.000 19.38 7.70 39.64 4.20
400 401 0.949588 TCGCGAAGTCTCAGTCGACT 60.950 55.000 13.58 13.58 45.73 4.18
401 402 0.720027 CGCGAAGTCTCAGTCGACTA 59.280 55.000 19.57 0.00 43.14 2.59
402 403 1.128136 CGCGAAGTCTCAGTCGACTAA 59.872 52.381 19.57 1.94 43.14 2.24
403 404 2.776330 GCGAAGTCTCAGTCGACTAAG 58.224 52.381 19.57 14.47 43.14 2.18
404 405 2.415857 GCGAAGTCTCAGTCGACTAAGA 59.584 50.000 19.57 17.01 43.14 2.10
405 406 3.725600 GCGAAGTCTCAGTCGACTAAGAC 60.726 52.174 33.03 33.03 43.14 3.01
410 411 6.040209 AGTCTCAGTCGACTAAGACTTAGA 57.960 41.667 35.84 18.66 46.73 2.10
416 417 5.220557 GTCGACTAAGACTTAGACAGACC 57.779 47.826 25.65 12.72 38.09 3.85
417 418 4.094739 GTCGACTAAGACTTAGACAGACCC 59.905 50.000 25.65 9.13 38.09 4.46
418 419 4.019501 TCGACTAAGACTTAGACAGACCCT 60.020 45.833 25.65 3.64 36.73 4.34
419 420 5.188555 TCGACTAAGACTTAGACAGACCCTA 59.811 44.000 25.65 1.65 36.73 3.53
420 421 5.879223 CGACTAAGACTTAGACAGACCCTAA 59.121 44.000 25.65 0.00 36.73 2.69
421 422 6.037391 CGACTAAGACTTAGACAGACCCTAAG 59.963 46.154 25.65 0.00 45.18 2.18
422 423 7.030234 ACTAAGACTTAGACAGACCCTAAGA 57.970 40.000 25.65 0.00 43.43 2.10
423 424 7.468496 ACTAAGACTTAGACAGACCCTAAGAA 58.532 38.462 25.65 0.00 43.43 2.52
424 425 7.949006 ACTAAGACTTAGACAGACCCTAAGAAA 59.051 37.037 25.65 0.00 43.43 2.52
425 426 7.800300 AAGACTTAGACAGACCCTAAGAAAT 57.200 36.000 14.56 0.00 43.43 2.17
426 427 8.896722 AAGACTTAGACAGACCCTAAGAAATA 57.103 34.615 14.56 0.00 43.43 1.40
427 428 9.495382 AAGACTTAGACAGACCCTAAGAAATAT 57.505 33.333 14.56 0.00 43.43 1.28
433 434 8.798975 AGACAGACCCTAAGAAATATATTCCA 57.201 34.615 0.00 0.00 0.00 3.53
434 435 8.652290 AGACAGACCCTAAGAAATATATTCCAC 58.348 37.037 0.00 0.00 0.00 4.02
435 436 8.568617 ACAGACCCTAAGAAATATATTCCACT 57.431 34.615 0.00 0.00 0.00 4.00
436 437 9.004231 ACAGACCCTAAGAAATATATTCCACTT 57.996 33.333 0.00 7.79 0.00 3.16
437 438 9.495572 CAGACCCTAAGAAATATATTCCACTTC 57.504 37.037 12.50 2.27 0.00 3.01
438 439 9.225682 AGACCCTAAGAAATATATTCCACTTCA 57.774 33.333 12.50 4.18 0.00 3.02
439 440 9.274206 GACCCTAAGAAATATATTCCACTTCAC 57.726 37.037 12.50 0.00 0.00 3.18
440 441 7.931948 ACCCTAAGAAATATATTCCACTTCACG 59.068 37.037 12.50 0.00 0.00 4.35
441 442 8.148351 CCCTAAGAAATATATTCCACTTCACGA 58.852 37.037 12.50 1.09 0.00 4.35
442 443 9.542462 CCTAAGAAATATATTCCACTTCACGAA 57.458 33.333 12.50 0.00 0.00 3.85
449 450 3.896648 TTCCACTTCACGAAATTCAGC 57.103 42.857 0.00 0.00 0.00 4.26
450 451 1.798223 TCCACTTCACGAAATTCAGCG 59.202 47.619 0.00 0.00 0.00 5.18
451 452 1.531149 CCACTTCACGAAATTCAGCGT 59.469 47.619 0.00 0.00 42.11 5.07
452 453 2.411547 CCACTTCACGAAATTCAGCGTC 60.412 50.000 0.00 0.00 38.92 5.19
453 454 2.220824 CACTTCACGAAATTCAGCGTCA 59.779 45.455 0.00 0.00 38.92 4.35
454 455 3.067106 ACTTCACGAAATTCAGCGTCAT 58.933 40.909 0.00 0.00 38.92 3.06
455 456 3.123621 ACTTCACGAAATTCAGCGTCATC 59.876 43.478 0.00 0.00 38.92 2.92
456 457 1.653609 TCACGAAATTCAGCGTCATCG 59.346 47.619 0.00 0.00 38.92 3.84
457 458 0.999406 ACGAAATTCAGCGTCATCGG 59.001 50.000 0.00 0.00 35.59 4.18
465 466 3.832704 AGCGTCATCGGTGATTTGA 57.167 47.368 0.00 0.00 46.08 2.69
466 467 2.315925 AGCGTCATCGGTGATTTGAT 57.684 45.000 0.00 0.00 46.08 2.57
467 468 2.205074 AGCGTCATCGGTGATTTGATC 58.795 47.619 0.00 0.00 46.08 2.92
468 469 1.071239 GCGTCATCGGTGATTTGATCG 60.071 52.381 0.00 0.00 36.60 3.69
469 470 1.522676 CGTCATCGGTGATTTGATCGG 59.477 52.381 0.00 0.00 36.60 4.18
470 471 2.550978 GTCATCGGTGATTTGATCGGT 58.449 47.619 0.00 0.00 36.60 4.69
471 472 2.936498 GTCATCGGTGATTTGATCGGTT 59.064 45.455 0.00 0.00 36.60 4.44
472 473 3.001330 GTCATCGGTGATTTGATCGGTTC 59.999 47.826 0.00 0.00 36.60 3.62
473 474 2.753055 TCGGTGATTTGATCGGTTCA 57.247 45.000 0.00 0.00 0.00 3.18
474 475 3.046968 TCGGTGATTTGATCGGTTCAA 57.953 42.857 0.00 0.00 42.62 2.69
580 581 6.471146 AGAACTGAAAGCAACTGATATGACT 58.529 36.000 0.00 0.00 37.60 3.41
591 1411 0.464036 GATATGACTGGTGGCGGTGA 59.536 55.000 0.00 0.00 0.00 4.02
638 2121 4.322198 GGTGGAATGTACGTTACTTCCAGA 60.322 45.833 19.61 3.35 41.81 3.86
670 2316 4.724399 TCCAAGTGGAAATAGAACAAGCA 58.276 39.130 0.00 0.00 42.18 3.91
671 2317 4.761739 TCCAAGTGGAAATAGAACAAGCAG 59.238 41.667 0.00 0.00 42.18 4.24
672 2318 4.479619 CAAGTGGAAATAGAACAAGCAGC 58.520 43.478 0.00 0.00 0.00 5.25
728 2390 8.687242 TGGAACAATTTGTCAAAGTAATACACA 58.313 29.630 1.83 0.00 31.92 3.72
729 2391 9.522804 GGAACAATTTGTCAAAGTAATACACAA 57.477 29.630 1.83 0.00 0.00 3.33
880 9454 2.310052 CCCACTCCCTTCTTTTCTCCAT 59.690 50.000 0.00 0.00 0.00 3.41
965 9546 2.925724 TCTGGCCGAAGAAAAACAAGA 58.074 42.857 0.00 0.00 0.00 3.02
966 9547 2.616842 TCTGGCCGAAGAAAAACAAGAC 59.383 45.455 0.00 0.00 0.00 3.01
967 9548 2.357637 CTGGCCGAAGAAAAACAAGACA 59.642 45.455 0.00 0.00 0.00 3.41
968 9549 2.755655 TGGCCGAAGAAAAACAAGACAA 59.244 40.909 0.00 0.00 0.00 3.18
969 9550 3.181491 TGGCCGAAGAAAAACAAGACAAG 60.181 43.478 0.00 0.00 0.00 3.16
1029 9646 3.745803 GGCGTCGTCGTCCTCCTT 61.746 66.667 3.66 0.00 39.49 3.36
1216 9845 4.400109 GCGACGTCCTCGACAGCA 62.400 66.667 10.58 0.00 46.14 4.41
1498 10148 4.619227 CCACCACGACGCCCAAGT 62.619 66.667 0.00 0.00 0.00 3.16
1544 10194 5.163195 ACATGAAAAGAGTGACAACCTACCT 60.163 40.000 0.00 0.00 0.00 3.08
1824 10595 3.693085 CCGTAGCTGTAGTTCCTCTAACA 59.307 47.826 0.00 0.00 40.83 2.41
2093 11862 3.243704 TGGAGGCCACAAGAAATTTTTCG 60.244 43.478 5.01 0.00 41.92 3.46
2207 12475 4.976540 AGCCTAATATGGTCCCTTGTAC 57.023 45.455 0.00 0.00 0.00 2.90
2243 14454 8.204836 ACCTAGCTGATAAGTTAGTAAATGGTG 58.795 37.037 0.00 0.00 0.00 4.17
2380 14634 7.599998 CAGGGTTTCATGGAGTTTAAAAATGAG 59.400 37.037 0.00 0.00 0.00 2.90
2620 14895 6.136857 TGGCAGTCCTATGAGTATAGTTTCT 58.863 40.000 0.00 0.00 35.51 2.52
2757 15069 5.105351 AGCAATAATTGAAGGGGTAGCAAAC 60.105 40.000 0.00 0.00 0.00 2.93
3080 15406 7.848128 AGGAAACTTCTCTATTAAATCCGACA 58.152 34.615 0.00 0.00 37.44 4.35
3082 15408 9.760077 GGAAACTTCTCTATTAAATCCGACATA 57.240 33.333 0.00 0.00 0.00 2.29
3152 15478 2.647299 TCTGGTACCCAACAATGTGGAT 59.353 45.455 10.07 0.00 41.65 3.41
3517 15896 4.712337 AGTAGGAAATGAAGAGACGTCCAT 59.288 41.667 13.01 5.53 0.00 3.41
3607 15988 5.408356 GTCGTGTCATGGTCTTGTACTATT 58.592 41.667 0.00 0.00 0.00 1.73
3628 16010 9.719355 ACTATTCATTTGTAGTACATTCACACA 57.281 29.630 3.28 0.00 29.75 3.72
3661 16044 7.241663 TGATGTATAATGTGTAAGTTTCGGC 57.758 36.000 0.00 0.00 0.00 5.54
3688 16071 4.024048 GTCTCAAGTGTGTGGTTTATGTGG 60.024 45.833 0.00 0.00 0.00 4.17
3706 16089 4.340617 TGTGGCCCAAAAAGTATAAGAGG 58.659 43.478 0.00 0.00 0.00 3.69
3737 16120 2.784347 AGCTACTTGGAGCAACCTTTC 58.216 47.619 7.65 0.00 45.43 2.62
3841 16247 6.582295 CACACATACTAAAACACTGCCAAATC 59.418 38.462 0.00 0.00 0.00 2.17
3847 16255 2.279935 AACACTGCCAAATCCGGTTA 57.720 45.000 0.00 0.00 0.00 2.85
3993 16404 3.030291 TGGTTTTGGTGCTTGATGAAGT 58.970 40.909 0.00 0.00 0.00 3.01
4057 16468 4.678743 AACCCTTTGCTCGGGCCC 62.679 66.667 13.57 13.57 46.04 5.80
4244 16658 5.340360 CCCCTCAATCTAAACCTCAAGGAAT 60.340 44.000 2.30 0.00 38.94 3.01
4355 16769 5.729974 GGTACAAACCGAATATCAAGGAC 57.270 43.478 0.00 0.00 35.62 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.017605 TCTCTGCTTCTTCATTTTTGTCACTC 60.018 38.462 0.00 0.00 0.00 3.51
4 5 5.278169 GCTCTCTGCTTCTTCATTTTTGTCA 60.278 40.000 0.00 0.00 38.95 3.58
5 6 5.152804 GCTCTCTGCTTCTTCATTTTTGTC 58.847 41.667 0.00 0.00 38.95 3.18
6 7 4.581824 TGCTCTCTGCTTCTTCATTTTTGT 59.418 37.500 0.00 0.00 43.37 2.83
7 8 5.117355 TGCTCTCTGCTTCTTCATTTTTG 57.883 39.130 0.00 0.00 43.37 2.44
8 9 4.217983 CCTGCTCTCTGCTTCTTCATTTTT 59.782 41.667 0.00 0.00 43.37 1.94
12 13 1.209990 CCCTGCTCTCTGCTTCTTCAT 59.790 52.381 0.00 0.00 43.37 2.57
13 14 0.612229 CCCTGCTCTCTGCTTCTTCA 59.388 55.000 0.00 0.00 43.37 3.02
14 15 0.612744 ACCCTGCTCTCTGCTTCTTC 59.387 55.000 0.00 0.00 43.37 2.87
15 16 0.612744 GACCCTGCTCTCTGCTTCTT 59.387 55.000 0.00 0.00 43.37 2.52
16 17 0.252193 AGACCCTGCTCTCTGCTTCT 60.252 55.000 0.00 0.00 43.37 2.85
17 18 0.612744 AAGACCCTGCTCTCTGCTTC 59.387 55.000 0.00 0.00 43.37 3.86
18 19 0.324285 CAAGACCCTGCTCTCTGCTT 59.676 55.000 0.00 0.00 43.37 3.91
19 20 0.543883 TCAAGACCCTGCTCTCTGCT 60.544 55.000 0.00 0.00 43.37 4.24
20 21 0.322975 TTCAAGACCCTGCTCTCTGC 59.677 55.000 0.00 0.00 43.25 4.26
21 22 1.898472 TCTTCAAGACCCTGCTCTCTG 59.102 52.381 0.00 0.00 0.00 3.35
22 23 2.317371 TCTTCAAGACCCTGCTCTCT 57.683 50.000 0.00 0.00 0.00 3.10
23 24 3.449018 TGTATCTTCAAGACCCTGCTCTC 59.551 47.826 0.00 0.00 0.00 3.20
24 25 3.445008 TGTATCTTCAAGACCCTGCTCT 58.555 45.455 0.00 0.00 0.00 4.09
25 26 3.895232 TGTATCTTCAAGACCCTGCTC 57.105 47.619 0.00 0.00 0.00 4.26
26 27 4.640771 TTTGTATCTTCAAGACCCTGCT 57.359 40.909 0.00 0.00 0.00 4.24
27 28 5.904362 AATTTGTATCTTCAAGACCCTGC 57.096 39.130 0.00 0.00 0.00 4.85
28 29 8.792830 TCTAAATTTGTATCTTCAAGACCCTG 57.207 34.615 0.00 0.00 0.00 4.45
29 30 9.454859 CTTCTAAATTTGTATCTTCAAGACCCT 57.545 33.333 0.00 0.00 0.00 4.34
30 31 9.449719 TCTTCTAAATTTGTATCTTCAAGACCC 57.550 33.333 0.00 0.00 0.00 4.46
48 49 9.780186 TCTACGTCATATCATCTCTCTTCTAAA 57.220 33.333 0.00 0.00 0.00 1.85
49 50 9.430623 CTCTACGTCATATCATCTCTCTTCTAA 57.569 37.037 0.00 0.00 0.00 2.10
50 51 8.808092 TCTCTACGTCATATCATCTCTCTTCTA 58.192 37.037 0.00 0.00 0.00 2.10
51 52 7.676004 TCTCTACGTCATATCATCTCTCTTCT 58.324 38.462 0.00 0.00 0.00 2.85
52 53 7.899178 TCTCTACGTCATATCATCTCTCTTC 57.101 40.000 0.00 0.00 0.00 2.87
53 54 8.100164 TGATCTCTACGTCATATCATCTCTCTT 58.900 37.037 0.00 0.00 0.00 2.85
54 55 7.549134 GTGATCTCTACGTCATATCATCTCTCT 59.451 40.741 0.00 0.00 0.00 3.10
55 56 7.549134 AGTGATCTCTACGTCATATCATCTCTC 59.451 40.741 0.00 0.00 0.00 3.20
56 57 7.334171 CAGTGATCTCTACGTCATATCATCTCT 59.666 40.741 0.00 0.00 0.00 3.10
57 58 7.333174 TCAGTGATCTCTACGTCATATCATCTC 59.667 40.741 0.00 0.00 0.00 2.75
58 59 7.119116 GTCAGTGATCTCTACGTCATATCATCT 59.881 40.741 0.00 0.00 0.00 2.90
59 60 7.095017 TGTCAGTGATCTCTACGTCATATCATC 60.095 40.741 0.00 0.00 0.00 2.92
60 61 6.712547 TGTCAGTGATCTCTACGTCATATCAT 59.287 38.462 0.00 0.00 0.00 2.45
61 62 6.017852 GTGTCAGTGATCTCTACGTCATATCA 60.018 42.308 0.00 0.00 0.00 2.15
62 63 6.203915 AGTGTCAGTGATCTCTACGTCATATC 59.796 42.308 0.00 0.00 0.00 1.63
63 64 6.017523 CAGTGTCAGTGATCTCTACGTCATAT 60.018 42.308 0.96 0.00 0.00 1.78
64 65 5.294552 CAGTGTCAGTGATCTCTACGTCATA 59.705 44.000 0.96 0.00 0.00 2.15
65 66 4.095632 CAGTGTCAGTGATCTCTACGTCAT 59.904 45.833 0.96 0.00 0.00 3.06
66 67 3.437049 CAGTGTCAGTGATCTCTACGTCA 59.563 47.826 0.96 0.00 0.00 4.35
67 68 3.685272 TCAGTGTCAGTGATCTCTACGTC 59.315 47.826 6.25 0.00 0.00 4.34
68 69 3.676093 TCAGTGTCAGTGATCTCTACGT 58.324 45.455 6.25 0.00 0.00 3.57
69 70 4.657055 CTTCAGTGTCAGTGATCTCTACG 58.343 47.826 11.17 0.00 0.00 3.51
70 71 4.082517 TGCTTCAGTGTCAGTGATCTCTAC 60.083 45.833 11.17 0.00 0.00 2.59
71 72 4.082125 TGCTTCAGTGTCAGTGATCTCTA 58.918 43.478 11.17 0.00 0.00 2.43
72 73 2.896044 TGCTTCAGTGTCAGTGATCTCT 59.104 45.455 11.17 0.00 0.00 3.10
73 74 3.309961 TGCTTCAGTGTCAGTGATCTC 57.690 47.619 11.17 4.69 0.00 2.75
74 75 3.260128 TGATGCTTCAGTGTCAGTGATCT 59.740 43.478 11.17 0.00 0.00 2.75
75 76 3.593096 TGATGCTTCAGTGTCAGTGATC 58.407 45.455 11.17 6.62 0.00 2.92
76 77 3.597255 CTGATGCTTCAGTGTCAGTGAT 58.403 45.455 18.96 0.00 43.73 3.06
77 78 3.036075 CTGATGCTTCAGTGTCAGTGA 57.964 47.619 18.96 6.25 43.73 3.41
87 88 2.093288 CAGCTAACCCTCTGATGCTTCA 60.093 50.000 1.92 1.92 32.26 3.02
88 89 2.093235 ACAGCTAACCCTCTGATGCTTC 60.093 50.000 0.00 0.00 34.57 3.86
89 90 1.912043 ACAGCTAACCCTCTGATGCTT 59.088 47.619 0.00 0.00 34.57 3.91
90 91 1.577736 ACAGCTAACCCTCTGATGCT 58.422 50.000 0.00 0.00 34.57 3.79
91 92 3.070159 TCATACAGCTAACCCTCTGATGC 59.930 47.826 0.00 0.00 34.57 3.91
92 93 4.944619 TCATACAGCTAACCCTCTGATG 57.055 45.455 0.00 0.00 34.57 3.07
93 94 5.189736 TGTTTCATACAGCTAACCCTCTGAT 59.810 40.000 0.00 0.00 34.57 2.90
94 95 4.530553 TGTTTCATACAGCTAACCCTCTGA 59.469 41.667 0.00 0.00 34.57 3.27
95 96 4.832248 TGTTTCATACAGCTAACCCTCTG 58.168 43.478 0.00 0.00 36.45 3.35
96 97 5.700402 ATGTTTCATACAGCTAACCCTCT 57.300 39.130 0.00 0.00 40.83 3.69
97 98 7.272978 TCTAATGTTTCATACAGCTAACCCTC 58.727 38.462 0.00 0.00 40.83 4.30
98 99 7.125811 TCTCTAATGTTTCATACAGCTAACCCT 59.874 37.037 0.00 0.00 40.83 4.34
99 100 7.272978 TCTCTAATGTTTCATACAGCTAACCC 58.727 38.462 0.00 0.00 40.83 4.11
100 101 8.718102 TTCTCTAATGTTTCATACAGCTAACC 57.282 34.615 0.00 0.00 40.83 2.85
101 102 8.821894 CCTTCTCTAATGTTTCATACAGCTAAC 58.178 37.037 0.00 0.00 40.83 2.34
102 103 8.758829 TCCTTCTCTAATGTTTCATACAGCTAA 58.241 33.333 0.00 0.00 40.83 3.09
103 104 8.306313 TCCTTCTCTAATGTTTCATACAGCTA 57.694 34.615 0.00 0.00 40.83 3.32
104 105 7.187824 TCCTTCTCTAATGTTTCATACAGCT 57.812 36.000 0.00 0.00 40.83 4.24
105 106 7.464710 CGTTCCTTCTCTAATGTTTCATACAGC 60.465 40.741 0.00 0.00 40.83 4.40
106 107 7.759886 TCGTTCCTTCTCTAATGTTTCATACAG 59.240 37.037 0.00 0.00 40.83 2.74
107 108 7.608153 TCGTTCCTTCTCTAATGTTTCATACA 58.392 34.615 0.00 0.00 41.97 2.29
108 109 8.475331 TTCGTTCCTTCTCTAATGTTTCATAC 57.525 34.615 0.00 0.00 0.00 2.39
109 110 8.528643 TCTTCGTTCCTTCTCTAATGTTTCATA 58.471 33.333 0.00 0.00 0.00 2.15
110 111 7.386851 TCTTCGTTCCTTCTCTAATGTTTCAT 58.613 34.615 0.00 0.00 0.00 2.57
111 112 6.755206 TCTTCGTTCCTTCTCTAATGTTTCA 58.245 36.000 0.00 0.00 0.00 2.69
112 113 7.385478 AGTTCTTCGTTCCTTCTCTAATGTTTC 59.615 37.037 0.00 0.00 0.00 2.78
113 114 7.171678 CAGTTCTTCGTTCCTTCTCTAATGTTT 59.828 37.037 0.00 0.00 0.00 2.83
114 115 6.647067 CAGTTCTTCGTTCCTTCTCTAATGTT 59.353 38.462 0.00 0.00 0.00 2.71
115 116 6.159988 CAGTTCTTCGTTCCTTCTCTAATGT 58.840 40.000 0.00 0.00 0.00 2.71
116 117 5.578727 CCAGTTCTTCGTTCCTTCTCTAATG 59.421 44.000 0.00 0.00 0.00 1.90
117 118 5.246429 ACCAGTTCTTCGTTCCTTCTCTAAT 59.754 40.000 0.00 0.00 0.00 1.73
118 119 4.587684 ACCAGTTCTTCGTTCCTTCTCTAA 59.412 41.667 0.00 0.00 0.00 2.10
119 120 4.150359 ACCAGTTCTTCGTTCCTTCTCTA 58.850 43.478 0.00 0.00 0.00 2.43
120 121 2.966516 ACCAGTTCTTCGTTCCTTCTCT 59.033 45.455 0.00 0.00 0.00 3.10
121 122 3.388345 ACCAGTTCTTCGTTCCTTCTC 57.612 47.619 0.00 0.00 0.00 2.87
122 123 4.150359 TCTACCAGTTCTTCGTTCCTTCT 58.850 43.478 0.00 0.00 0.00 2.85
123 124 4.487019 CTCTACCAGTTCTTCGTTCCTTC 58.513 47.826 0.00 0.00 0.00 3.46
124 125 3.258622 CCTCTACCAGTTCTTCGTTCCTT 59.741 47.826 0.00 0.00 0.00 3.36
125 126 2.826725 CCTCTACCAGTTCTTCGTTCCT 59.173 50.000 0.00 0.00 0.00 3.36
126 127 2.824341 TCCTCTACCAGTTCTTCGTTCC 59.176 50.000 0.00 0.00 0.00 3.62
127 128 4.516365 TTCCTCTACCAGTTCTTCGTTC 57.484 45.455 0.00 0.00 0.00 3.95
128 129 4.527038 TCATTCCTCTACCAGTTCTTCGTT 59.473 41.667 0.00 0.00 0.00 3.85
129 130 4.087182 TCATTCCTCTACCAGTTCTTCGT 58.913 43.478 0.00 0.00 0.00 3.85
130 131 4.720649 TCATTCCTCTACCAGTTCTTCG 57.279 45.455 0.00 0.00 0.00 3.79
131 132 6.702329 TCTTTCATTCCTCTACCAGTTCTTC 58.298 40.000 0.00 0.00 0.00 2.87
132 133 6.688073 TCTTTCATTCCTCTACCAGTTCTT 57.312 37.500 0.00 0.00 0.00 2.52
133 134 6.882768 ATCTTTCATTCCTCTACCAGTTCT 57.117 37.500 0.00 0.00 0.00 3.01
134 135 7.929941 AAATCTTTCATTCCTCTACCAGTTC 57.070 36.000 0.00 0.00 0.00 3.01
135 136 7.394641 GGAAAATCTTTCATTCCTCTACCAGTT 59.605 37.037 1.88 0.00 39.60 3.16
136 137 6.887002 GGAAAATCTTTCATTCCTCTACCAGT 59.113 38.462 1.88 0.00 39.60 4.00
137 138 7.326968 GGAAAATCTTTCATTCCTCTACCAG 57.673 40.000 1.88 0.00 39.60 4.00
145 146 5.629079 ACGACAGGAAAATCTTTCATTCC 57.371 39.130 0.00 0.00 42.38 3.01
146 147 7.271438 GCTAAACGACAGGAAAATCTTTCATTC 59.729 37.037 0.00 0.00 0.00 2.67
147 148 7.040409 AGCTAAACGACAGGAAAATCTTTCATT 60.040 33.333 0.00 0.00 0.00 2.57
148 149 6.431234 AGCTAAACGACAGGAAAATCTTTCAT 59.569 34.615 0.00 0.00 0.00 2.57
149 150 5.763204 AGCTAAACGACAGGAAAATCTTTCA 59.237 36.000 0.00 0.00 0.00 2.69
150 151 6.242508 AGCTAAACGACAGGAAAATCTTTC 57.757 37.500 0.00 0.00 0.00 2.62
151 152 6.708949 TGTAGCTAAACGACAGGAAAATCTTT 59.291 34.615 0.00 0.00 29.71 2.52
152 153 6.228258 TGTAGCTAAACGACAGGAAAATCTT 58.772 36.000 0.00 0.00 29.71 2.40
153 154 5.790593 TGTAGCTAAACGACAGGAAAATCT 58.209 37.500 0.00 0.00 29.71 2.40
154 155 6.095947 CTGTAGCTAAACGACAGGAAAATC 57.904 41.667 5.78 0.00 45.35 2.17
155 156 6.708949 TTTCTGTAGCTAAACGACAGGAAAAT 59.291 34.615 12.50 0.00 43.96 1.82
156 157 6.050432 TTTCTGTAGCTAAACGACAGGAAAA 58.950 36.000 12.50 5.40 43.96 2.29
157 158 5.603596 TTTCTGTAGCTAAACGACAGGAAA 58.396 37.500 12.50 9.27 43.96 3.13
162 163 4.625742 GCTCATTTCTGTAGCTAAACGACA 59.374 41.667 0.00 0.00 33.40 4.35
163 164 4.033014 GGCTCATTTCTGTAGCTAAACGAC 59.967 45.833 0.00 0.00 36.48 4.34
164 165 4.081642 AGGCTCATTTCTGTAGCTAAACGA 60.082 41.667 0.00 0.00 36.48 3.85
165 166 4.184629 AGGCTCATTTCTGTAGCTAAACG 58.815 43.478 0.00 0.00 36.48 3.60
166 167 6.594159 TGTAAGGCTCATTTCTGTAGCTAAAC 59.406 38.462 0.00 0.00 36.48 2.01
167 168 6.707290 TGTAAGGCTCATTTCTGTAGCTAAA 58.293 36.000 0.00 0.00 36.48 1.85
168 169 6.294361 TGTAAGGCTCATTTCTGTAGCTAA 57.706 37.500 0.00 0.00 36.48 3.09
169 170 5.932619 TGTAAGGCTCATTTCTGTAGCTA 57.067 39.130 0.00 0.00 36.48 3.32
170 171 4.826274 TGTAAGGCTCATTTCTGTAGCT 57.174 40.909 0.00 0.00 36.48 3.32
171 172 6.442513 AAATGTAAGGCTCATTTCTGTAGC 57.557 37.500 8.02 0.00 40.13 3.58
205 206 0.246086 GTCCATGGATGCCGCAAAAA 59.754 50.000 19.62 0.00 0.00 1.94
206 207 0.897401 TGTCCATGGATGCCGCAAAA 60.897 50.000 19.62 0.00 0.00 2.44
207 208 1.303970 TGTCCATGGATGCCGCAAA 60.304 52.632 19.62 0.00 0.00 3.68
208 209 1.750018 CTGTCCATGGATGCCGCAA 60.750 57.895 19.62 0.00 0.00 4.85
209 210 2.124612 CTGTCCATGGATGCCGCA 60.125 61.111 19.62 9.81 0.00 5.69
210 211 2.124570 ACTGTCCATGGATGCCGC 60.125 61.111 19.62 4.90 0.00 6.53
211 212 0.812811 CTCACTGTCCATGGATGCCG 60.813 60.000 19.62 9.17 0.00 5.69
212 213 0.465097 CCTCACTGTCCATGGATGCC 60.465 60.000 19.62 5.73 0.00 4.40
213 214 0.465097 CCCTCACTGTCCATGGATGC 60.465 60.000 19.62 6.56 0.00 3.91
214 215 1.140452 CTCCCTCACTGTCCATGGATG 59.860 57.143 19.62 16.20 0.00 3.51
215 216 1.504912 CTCCCTCACTGTCCATGGAT 58.495 55.000 19.62 0.00 0.00 3.41
216 217 0.618680 CCTCCCTCACTGTCCATGGA 60.619 60.000 11.44 11.44 0.00 3.41
217 218 0.911525 ACCTCCCTCACTGTCCATGG 60.912 60.000 4.97 4.97 0.00 3.66
218 219 1.866015 TACCTCCCTCACTGTCCATG 58.134 55.000 0.00 0.00 0.00 3.66
219 220 2.642171 TTACCTCCCTCACTGTCCAT 57.358 50.000 0.00 0.00 0.00 3.41
220 221 2.370849 GTTTTACCTCCCTCACTGTCCA 59.629 50.000 0.00 0.00 0.00 4.02
221 222 2.370849 TGTTTTACCTCCCTCACTGTCC 59.629 50.000 0.00 0.00 0.00 4.02
222 223 3.557264 CCTGTTTTACCTCCCTCACTGTC 60.557 52.174 0.00 0.00 0.00 3.51
223 224 2.372172 CCTGTTTTACCTCCCTCACTGT 59.628 50.000 0.00 0.00 0.00 3.55
224 225 2.372172 ACCTGTTTTACCTCCCTCACTG 59.628 50.000 0.00 0.00 0.00 3.66
225 226 2.702748 ACCTGTTTTACCTCCCTCACT 58.297 47.619 0.00 0.00 0.00 3.41
226 227 3.181448 TGAACCTGTTTTACCTCCCTCAC 60.181 47.826 0.00 0.00 0.00 3.51
227 228 3.050089 TGAACCTGTTTTACCTCCCTCA 58.950 45.455 0.00 0.00 0.00 3.86
228 229 3.782656 TGAACCTGTTTTACCTCCCTC 57.217 47.619 0.00 0.00 0.00 4.30
229 230 3.203487 TGTTGAACCTGTTTTACCTCCCT 59.797 43.478 0.00 0.00 0.00 4.20
230 231 3.558033 TGTTGAACCTGTTTTACCTCCC 58.442 45.455 0.00 0.00 0.00 4.30
231 232 5.105675 TGTTTGTTGAACCTGTTTTACCTCC 60.106 40.000 0.00 0.00 37.45 4.30
232 233 5.956642 TGTTTGTTGAACCTGTTTTACCTC 58.043 37.500 0.00 0.00 37.45 3.85
233 234 5.712917 TCTGTTTGTTGAACCTGTTTTACCT 59.287 36.000 0.00 0.00 37.45 3.08
234 235 5.803461 GTCTGTTTGTTGAACCTGTTTTACC 59.197 40.000 0.00 0.00 37.45 2.85
235 236 6.383415 TGTCTGTTTGTTGAACCTGTTTTAC 58.617 36.000 0.00 0.00 37.45 2.01
236 237 6.576662 TGTCTGTTTGTTGAACCTGTTTTA 57.423 33.333 0.00 0.00 37.45 1.52
237 238 5.461032 TGTCTGTTTGTTGAACCTGTTTT 57.539 34.783 0.00 0.00 37.45 2.43
238 239 5.221342 TGTTGTCTGTTTGTTGAACCTGTTT 60.221 36.000 0.00 0.00 37.45 2.83
239 240 4.279671 TGTTGTCTGTTTGTTGAACCTGTT 59.720 37.500 0.00 0.00 37.45 3.16
240 241 3.823873 TGTTGTCTGTTTGTTGAACCTGT 59.176 39.130 0.00 0.00 37.45 4.00
241 242 4.165779 GTGTTGTCTGTTTGTTGAACCTG 58.834 43.478 0.00 0.00 37.45 4.00
242 243 3.823873 TGTGTTGTCTGTTTGTTGAACCT 59.176 39.130 0.00 0.00 37.45 3.50
243 244 4.167554 TGTGTTGTCTGTTTGTTGAACC 57.832 40.909 0.00 0.00 37.45 3.62
244 245 6.517914 TTTTGTGTTGTCTGTTTGTTGAAC 57.482 33.333 0.00 0.00 38.78 3.18
265 266 4.454161 GTGGGCTTGTTTGTTTGTCTTTTT 59.546 37.500 0.00 0.00 0.00 1.94
266 267 4.000325 GTGGGCTTGTTTGTTTGTCTTTT 59.000 39.130 0.00 0.00 0.00 2.27
267 268 3.007398 TGTGGGCTTGTTTGTTTGTCTTT 59.993 39.130 0.00 0.00 0.00 2.52
268 269 2.564947 TGTGGGCTTGTTTGTTTGTCTT 59.435 40.909 0.00 0.00 0.00 3.01
269 270 2.094234 GTGTGGGCTTGTTTGTTTGTCT 60.094 45.455 0.00 0.00 0.00 3.41
270 271 2.267426 GTGTGGGCTTGTTTGTTTGTC 58.733 47.619 0.00 0.00 0.00 3.18
271 272 1.066502 GGTGTGGGCTTGTTTGTTTGT 60.067 47.619 0.00 0.00 0.00 2.83
272 273 1.066573 TGGTGTGGGCTTGTTTGTTTG 60.067 47.619 0.00 0.00 0.00 2.93
273 274 1.066502 GTGGTGTGGGCTTGTTTGTTT 60.067 47.619 0.00 0.00 0.00 2.83
274 275 0.534873 GTGGTGTGGGCTTGTTTGTT 59.465 50.000 0.00 0.00 0.00 2.83
275 276 0.613292 TGTGGTGTGGGCTTGTTTGT 60.613 50.000 0.00 0.00 0.00 2.83
276 277 0.102844 CTGTGGTGTGGGCTTGTTTG 59.897 55.000 0.00 0.00 0.00 2.93
277 278 1.042559 CCTGTGGTGTGGGCTTGTTT 61.043 55.000 0.00 0.00 0.00 2.83
278 279 1.455587 CCTGTGGTGTGGGCTTGTT 60.456 57.895 0.00 0.00 0.00 2.83
279 280 2.195683 CCTGTGGTGTGGGCTTGT 59.804 61.111 0.00 0.00 0.00 3.16
280 281 3.297620 GCCTGTGGTGTGGGCTTG 61.298 66.667 0.00 0.00 42.31 4.01
281 282 4.603535 GGCCTGTGGTGTGGGCTT 62.604 66.667 0.00 0.00 44.70 4.35
284 285 4.974721 GTGGGCCTGTGGTGTGGG 62.975 72.222 4.53 0.00 0.00 4.61
285 286 4.974721 GGTGGGCCTGTGGTGTGG 62.975 72.222 4.53 0.00 0.00 4.17
286 287 4.202574 TGGTGGGCCTGTGGTGTG 62.203 66.667 4.53 0.00 35.27 3.82
287 288 4.204028 GTGGTGGGCCTGTGGTGT 62.204 66.667 4.53 0.00 35.27 4.16
298 299 2.028839 GGTTTAAATTTCCCCGTGGTGG 60.029 50.000 0.00 0.00 37.55 4.61
299 300 2.028839 GGGTTTAAATTTCCCCGTGGTG 60.029 50.000 0.00 0.00 35.52 4.17
300 301 2.250031 GGGTTTAAATTTCCCCGTGGT 58.750 47.619 0.00 0.00 35.52 4.16
301 302 2.249139 TGGGTTTAAATTTCCCCGTGG 58.751 47.619 10.21 0.00 40.20 4.94
302 303 3.069729 TGTTGGGTTTAAATTTCCCCGTG 59.930 43.478 10.21 0.00 40.20 4.94
303 304 3.306613 TGTTGGGTTTAAATTTCCCCGT 58.693 40.909 10.21 0.00 40.20 5.28
304 305 3.322541 ACTGTTGGGTTTAAATTTCCCCG 59.677 43.478 10.21 2.65 40.20 5.73
305 306 4.345547 TCACTGTTGGGTTTAAATTTCCCC 59.654 41.667 10.21 11.00 40.41 4.81
306 307 5.510690 CCTCACTGTTGGGTTTAAATTTCCC 60.511 44.000 6.50 6.50 41.41 3.97
307 308 5.510690 CCCTCACTGTTGGGTTTAAATTTCC 60.511 44.000 0.00 0.00 38.65 3.13
308 309 5.538118 CCCTCACTGTTGGGTTTAAATTTC 58.462 41.667 0.00 0.00 38.65 2.17
309 310 5.545063 CCCTCACTGTTGGGTTTAAATTT 57.455 39.130 7.31 0.00 38.65 1.82
319 320 0.182537 TTCACCACCCTCACTGTTGG 59.817 55.000 0.00 0.00 0.00 3.77
320 321 1.676006 GTTTCACCACCCTCACTGTTG 59.324 52.381 0.00 0.00 0.00 3.33
321 322 1.745827 CGTTTCACCACCCTCACTGTT 60.746 52.381 0.00 0.00 0.00 3.16
322 323 0.179056 CGTTTCACCACCCTCACTGT 60.179 55.000 0.00 0.00 0.00 3.55
323 324 0.884704 CCGTTTCACCACCCTCACTG 60.885 60.000 0.00 0.00 0.00 3.66
324 325 1.450211 CCGTTTCACCACCCTCACT 59.550 57.895 0.00 0.00 0.00 3.41
325 326 1.599797 CCCGTTTCACCACCCTCAC 60.600 63.158 0.00 0.00 0.00 3.51
326 327 2.833227 CCCGTTTCACCACCCTCA 59.167 61.111 0.00 0.00 0.00 3.86
327 328 2.671963 GCCCGTTTCACCACCCTC 60.672 66.667 0.00 0.00 0.00 4.30
328 329 4.280019 GGCCCGTTTCACCACCCT 62.280 66.667 0.00 0.00 0.00 4.34
329 330 2.414658 TTAGGCCCGTTTCACCACCC 62.415 60.000 0.00 0.00 0.00 4.61
330 331 0.323087 ATTAGGCCCGTTTCACCACC 60.323 55.000 0.00 0.00 0.00 4.61
331 332 1.092348 GATTAGGCCCGTTTCACCAC 58.908 55.000 0.00 0.00 0.00 4.16
332 333 0.988832 AGATTAGGCCCGTTTCACCA 59.011 50.000 0.00 0.00 0.00 4.17
333 334 2.093341 TGTAGATTAGGCCCGTTTCACC 60.093 50.000 0.00 0.00 0.00 4.02
334 335 2.934553 GTGTAGATTAGGCCCGTTTCAC 59.065 50.000 0.00 0.00 0.00 3.18
335 336 2.568062 TGTGTAGATTAGGCCCGTTTCA 59.432 45.455 0.00 0.00 0.00 2.69
336 337 3.195661 CTGTGTAGATTAGGCCCGTTTC 58.804 50.000 0.00 0.00 0.00 2.78
337 338 2.093128 CCTGTGTAGATTAGGCCCGTTT 60.093 50.000 0.00 0.00 0.00 3.60
338 339 1.485066 CCTGTGTAGATTAGGCCCGTT 59.515 52.381 0.00 0.00 0.00 4.44
339 340 1.120530 CCTGTGTAGATTAGGCCCGT 58.879 55.000 0.00 0.00 0.00 5.28
340 341 0.393077 CCCTGTGTAGATTAGGCCCG 59.607 60.000 0.00 0.00 0.00 6.13
341 342 1.141053 CACCCTGTGTAGATTAGGCCC 59.859 57.143 0.00 0.00 0.00 5.80
342 343 2.116238 TCACCCTGTGTAGATTAGGCC 58.884 52.381 0.00 0.00 34.79 5.19
343 344 2.500098 TGTCACCCTGTGTAGATTAGGC 59.500 50.000 0.00 0.00 34.79 3.93
344 345 4.405680 TGATGTCACCCTGTGTAGATTAGG 59.594 45.833 0.00 0.00 34.79 2.69
345 346 5.595885 CTGATGTCACCCTGTGTAGATTAG 58.404 45.833 0.00 0.00 34.79 1.73
346 347 4.141937 GCTGATGTCACCCTGTGTAGATTA 60.142 45.833 0.00 0.00 34.79 1.75
347 348 3.369892 GCTGATGTCACCCTGTGTAGATT 60.370 47.826 0.00 0.00 34.79 2.40
348 349 2.169352 GCTGATGTCACCCTGTGTAGAT 59.831 50.000 0.00 0.00 34.79 1.98
349 350 1.550524 GCTGATGTCACCCTGTGTAGA 59.449 52.381 0.00 0.00 34.79 2.59
350 351 1.406069 GGCTGATGTCACCCTGTGTAG 60.406 57.143 0.00 0.00 34.79 2.74
351 352 0.613260 GGCTGATGTCACCCTGTGTA 59.387 55.000 0.00 0.00 34.79 2.90
352 353 1.376466 GGCTGATGTCACCCTGTGT 59.624 57.895 0.00 0.00 34.79 3.72
353 354 1.742880 CGGCTGATGTCACCCTGTG 60.743 63.158 0.00 0.00 34.45 3.66
354 355 1.913262 TCGGCTGATGTCACCCTGT 60.913 57.895 0.00 0.00 0.00 4.00
355 356 1.448540 GTCGGCTGATGTCACCCTG 60.449 63.158 0.00 0.00 0.00 4.45
356 357 1.610673 AGTCGGCTGATGTCACCCT 60.611 57.895 0.00 0.00 0.00 4.34
357 358 1.448540 CAGTCGGCTGATGTCACCC 60.449 63.158 12.86 0.00 45.28 4.61
358 359 1.591703 TCAGTCGGCTGATGTCACC 59.408 57.895 17.42 0.00 45.94 4.02
366 367 1.803519 GCGAAGTCTCAGTCGGCTG 60.804 63.158 11.77 11.77 43.87 4.85
367 368 2.569134 GCGAAGTCTCAGTCGGCT 59.431 61.111 0.00 0.00 37.73 5.52
368 369 2.797866 TTCGCGAAGTCTCAGTCGGC 62.798 60.000 19.38 0.00 37.73 5.54
369 370 0.794981 CTTCGCGAAGTCTCAGTCGG 60.795 60.000 34.97 11.44 37.73 4.79
370 371 2.631303 CTTCGCGAAGTCTCAGTCG 58.369 57.895 34.97 12.16 40.24 4.18
379 380 0.166161 TCGACTGAGACTTCGCGAAG 59.834 55.000 39.55 39.55 43.79 3.79
380 381 0.110328 GTCGACTGAGACTTCGCGAA 60.110 55.000 22.01 22.01 38.09 4.70
381 382 1.496393 GTCGACTGAGACTTCGCGA 59.504 57.895 3.71 3.71 38.09 5.87
382 383 4.044024 GTCGACTGAGACTTCGCG 57.956 61.111 8.70 0.00 38.09 5.87
389 390 5.791666 TGTCTAAGTCTTAGTCGACTGAGA 58.208 41.667 30.05 30.05 45.21 3.27
390 391 5.870433 TCTGTCTAAGTCTTAGTCGACTGAG 59.130 44.000 26.80 26.80 43.14 3.35
391 392 5.638657 GTCTGTCTAAGTCTTAGTCGACTGA 59.361 44.000 28.12 19.13 43.14 3.41
392 393 5.163834 GGTCTGTCTAAGTCTTAGTCGACTG 60.164 48.000 28.12 12.46 43.14 3.51
393 394 4.937015 GGTCTGTCTAAGTCTTAGTCGACT 59.063 45.833 23.66 23.66 45.73 4.18
394 395 4.094739 GGGTCTGTCTAAGTCTTAGTCGAC 59.905 50.000 17.35 19.08 34.81 4.20
395 396 4.019501 AGGGTCTGTCTAAGTCTTAGTCGA 60.020 45.833 17.35 11.42 34.81 4.20
396 397 4.263435 AGGGTCTGTCTAAGTCTTAGTCG 58.737 47.826 17.35 9.72 34.81 4.18
397 398 7.111466 TCTTAGGGTCTGTCTAAGTCTTAGTC 58.889 42.308 17.35 13.18 42.41 2.59
398 399 7.030234 TCTTAGGGTCTGTCTAAGTCTTAGT 57.970 40.000 17.35 0.96 42.41 2.24
399 400 7.941431 TTCTTAGGGTCTGTCTAAGTCTTAG 57.059 40.000 12.73 12.73 42.41 2.18
400 401 8.896722 ATTTCTTAGGGTCTGTCTAAGTCTTA 57.103 34.615 9.70 0.00 42.41 2.10
401 402 7.800300 ATTTCTTAGGGTCTGTCTAAGTCTT 57.200 36.000 9.70 0.00 42.41 3.01
407 408 9.892444 TGGAATATATTTCTTAGGGTCTGTCTA 57.108 33.333 5.34 0.00 0.00 2.59
408 409 8.652290 GTGGAATATATTTCTTAGGGTCTGTCT 58.348 37.037 5.34 0.00 0.00 3.41
409 410 8.652290 AGTGGAATATATTTCTTAGGGTCTGTC 58.348 37.037 5.34 0.00 0.00 3.51
410 411 8.568617 AGTGGAATATATTTCTTAGGGTCTGT 57.431 34.615 5.34 0.00 0.00 3.41
411 412 9.495572 GAAGTGGAATATATTTCTTAGGGTCTG 57.504 37.037 5.34 0.00 0.00 3.51
412 413 9.225682 TGAAGTGGAATATATTTCTTAGGGTCT 57.774 33.333 5.34 0.00 0.00 3.85
413 414 9.274206 GTGAAGTGGAATATATTTCTTAGGGTC 57.726 37.037 5.34 0.00 0.00 4.46
414 415 7.931948 CGTGAAGTGGAATATATTTCTTAGGGT 59.068 37.037 5.34 0.00 0.00 4.34
415 416 8.148351 TCGTGAAGTGGAATATATTTCTTAGGG 58.852 37.037 5.34 2.68 0.00 3.53
416 417 9.542462 TTCGTGAAGTGGAATATATTTCTTAGG 57.458 33.333 5.34 2.94 0.00 2.69
423 424 8.345565 GCTGAATTTCGTGAAGTGGAATATATT 58.654 33.333 0.00 0.00 0.00 1.28
424 425 7.307396 CGCTGAATTTCGTGAAGTGGAATATAT 60.307 37.037 0.00 0.00 0.00 0.86
425 426 6.019075 CGCTGAATTTCGTGAAGTGGAATATA 60.019 38.462 0.00 0.00 0.00 0.86
426 427 5.220662 CGCTGAATTTCGTGAAGTGGAATAT 60.221 40.000 0.00 0.00 0.00 1.28
427 428 4.092821 CGCTGAATTTCGTGAAGTGGAATA 59.907 41.667 0.00 0.00 0.00 1.75
428 429 3.120199 CGCTGAATTTCGTGAAGTGGAAT 60.120 43.478 0.00 0.00 0.00 3.01
429 430 2.223144 CGCTGAATTTCGTGAAGTGGAA 59.777 45.455 0.00 0.00 0.00 3.53
430 431 1.798223 CGCTGAATTTCGTGAAGTGGA 59.202 47.619 0.00 0.00 0.00 4.02
431 432 1.531149 ACGCTGAATTTCGTGAAGTGG 59.469 47.619 8.19 0.00 37.55 4.00
432 433 2.220824 TGACGCTGAATTTCGTGAAGTG 59.779 45.455 6.16 2.44 39.22 3.16
433 434 2.479837 TGACGCTGAATTTCGTGAAGT 58.520 42.857 6.16 1.72 39.22 3.01
434 435 3.663908 GATGACGCTGAATTTCGTGAAG 58.336 45.455 6.16 0.00 39.22 3.02
435 436 2.092055 CGATGACGCTGAATTTCGTGAA 59.908 45.455 6.16 0.00 39.22 3.18
436 437 1.653609 CGATGACGCTGAATTTCGTGA 59.346 47.619 6.16 0.00 39.22 4.35
437 438 1.267038 CCGATGACGCTGAATTTCGTG 60.267 52.381 6.16 0.00 39.22 4.35
438 439 0.999406 CCGATGACGCTGAATTTCGT 59.001 50.000 1.84 1.84 42.09 3.85
439 440 0.999406 ACCGATGACGCTGAATTTCG 59.001 50.000 0.00 0.00 38.29 3.46
440 441 1.999735 TCACCGATGACGCTGAATTTC 59.000 47.619 0.00 0.00 38.29 2.17
441 442 2.093306 TCACCGATGACGCTGAATTT 57.907 45.000 0.00 0.00 38.29 1.82
442 443 2.315925 ATCACCGATGACGCTGAATT 57.684 45.000 0.00 0.00 37.59 2.17
443 444 2.315925 AATCACCGATGACGCTGAAT 57.684 45.000 0.00 0.00 37.59 2.57
444 445 1.731709 CAAATCACCGATGACGCTGAA 59.268 47.619 0.00 0.00 37.59 3.02
445 446 1.067213 TCAAATCACCGATGACGCTGA 60.067 47.619 0.00 0.00 37.79 4.26
446 447 1.358877 TCAAATCACCGATGACGCTG 58.641 50.000 0.00 0.00 37.79 5.18
447 448 2.205074 GATCAAATCACCGATGACGCT 58.795 47.619 0.00 0.00 37.79 5.07
448 449 1.071239 CGATCAAATCACCGATGACGC 60.071 52.381 0.00 0.00 37.79 5.19
449 450 1.522676 CCGATCAAATCACCGATGACG 59.477 52.381 0.00 0.00 37.79 4.35
450 451 2.550978 ACCGATCAAATCACCGATGAC 58.449 47.619 0.00 0.00 37.79 3.06
451 452 2.979814 ACCGATCAAATCACCGATGA 57.020 45.000 0.00 0.00 39.83 2.92
452 453 2.935849 TGAACCGATCAAATCACCGATG 59.064 45.455 0.00 0.00 34.30 3.84
453 454 3.260475 TGAACCGATCAAATCACCGAT 57.740 42.857 0.00 0.00 34.30 4.18
454 455 2.753055 TGAACCGATCAAATCACCGA 57.247 45.000 0.00 0.00 34.30 4.69
516 517 9.875691 GTGCCTTAATTTTATTTCTTTGAGGAT 57.124 29.630 0.00 0.00 0.00 3.24
517 518 8.865090 TGTGCCTTAATTTTATTTCTTTGAGGA 58.135 29.630 0.00 0.00 0.00 3.71
518 519 9.657419 ATGTGCCTTAATTTTATTTCTTTGAGG 57.343 29.630 0.00 0.00 0.00 3.86
525 526 7.275560 AGCGAACATGTGCCTTAATTTTATTTC 59.724 33.333 0.00 0.00 0.00 2.17
526 527 7.096551 AGCGAACATGTGCCTTAATTTTATTT 58.903 30.769 0.00 0.00 0.00 1.40
540 541 3.366121 CAGTTCTCACTAGCGAACATGTG 59.634 47.826 17.26 7.65 40.92 3.21
580 581 2.156098 GTTAATTTCTCACCGCCACCA 58.844 47.619 0.00 0.00 0.00 4.17
591 1411 6.660949 CCTGGACCATTCTTCAGTTAATTTCT 59.339 38.462 0.00 0.00 0.00 2.52
660 2143 5.243060 TGTTACTCACTAGCTGCTTGTTCTA 59.757 40.000 13.94 2.84 0.00 2.10
666 2312 5.413309 AATCTGTTACTCACTAGCTGCTT 57.587 39.130 7.79 0.00 0.00 3.91
667 2313 5.413309 AAATCTGTTACTCACTAGCTGCT 57.587 39.130 7.57 7.57 0.00 4.24
668 2314 6.422400 GGATAAATCTGTTACTCACTAGCTGC 59.578 42.308 0.00 0.00 0.00 5.25
669 2315 7.436673 GTGGATAAATCTGTTACTCACTAGCTG 59.563 40.741 0.00 0.00 0.00 4.24
670 2316 7.124298 TGTGGATAAATCTGTTACTCACTAGCT 59.876 37.037 0.00 0.00 0.00 3.32
671 2317 7.222999 GTGTGGATAAATCTGTTACTCACTAGC 59.777 40.741 0.00 0.00 0.00 3.42
672 2318 8.251026 TGTGTGGATAAATCTGTTACTCACTAG 58.749 37.037 0.00 0.00 0.00 2.57
746 2408 8.690203 TTTCTTGAATCATTCACTTGGTCTTA 57.310 30.769 0.00 0.00 39.87 2.10
785 2505 0.525455 CGATCGACGCACCAATCAGA 60.525 55.000 10.26 0.00 34.51 3.27
786 2506 0.802222 ACGATCGACGCACCAATCAG 60.802 55.000 24.34 0.00 46.94 2.90
866 9439 1.821136 GGCCACATGGAGAAAAGAAGG 59.179 52.381 0.87 0.00 37.39 3.46
880 9454 2.504032 GGATTCGGATCGGCCACA 59.496 61.111 2.24 0.00 35.94 4.17
951 9532 5.573146 AGCTTCTTGTCTTGTTTTTCTTCG 58.427 37.500 0.00 0.00 0.00 3.79
965 9546 0.615850 GGCCTACTGGAGCTTCTTGT 59.384 55.000 0.00 0.00 34.57 3.16
966 9547 0.460987 CGGCCTACTGGAGCTTCTTG 60.461 60.000 0.00 0.00 34.57 3.02
967 9548 0.905337 ACGGCCTACTGGAGCTTCTT 60.905 55.000 0.00 0.00 34.57 2.52
968 9549 0.905337 AACGGCCTACTGGAGCTTCT 60.905 55.000 0.00 0.00 34.57 2.85
969 9550 0.822164 TAACGGCCTACTGGAGCTTC 59.178 55.000 0.00 0.00 34.57 3.86
1021 9638 2.747135 CGAGTAGGAGGAGAAGGAGGAC 60.747 59.091 0.00 0.00 0.00 3.85
1029 9646 2.516460 GGCGCGAGTAGGAGGAGA 60.516 66.667 12.10 0.00 0.00 3.71
1228 9857 4.457496 CCAGTCGGCGATGCAGGT 62.457 66.667 14.79 0.00 0.00 4.00
1513 10163 5.563592 TGTCACTCTTTTCATGTCCATGAT 58.436 37.500 10.56 0.00 46.12 2.45
1544 10194 1.900016 ACCTGCGAGTACACGTCCA 60.900 57.895 14.14 3.99 35.59 4.02
1824 10595 1.312815 AGAAGAAAAACGCTGCTGCT 58.687 45.000 14.03 0.00 36.97 4.24
1956 10801 8.640063 TTGCCATCAAATATCATAGCAGTAAT 57.360 30.769 0.00 0.00 0.00 1.89
2093 11862 1.412343 TGCCCAAGTTTGCTTTCTTCC 59.588 47.619 0.00 0.00 31.49 3.46
2207 12475 5.812642 ACTTATCAGCTAGGTTCATGTTTCG 59.187 40.000 0.00 0.00 0.00 3.46
2243 14454 8.924511 TGGATCATTGTAATTAATCCTTCTCC 57.075 34.615 12.31 4.34 37.40 3.71
2380 14634 1.065126 AGTTTGGCTATGAGCTGGACC 60.065 52.381 0.00 0.00 41.99 4.46
2757 15069 5.972382 GTGCTTATGTAAGTAGAGAAGTCCG 59.028 44.000 2.11 0.00 35.75 4.79
3080 15406 6.435277 AGAATGACAACACCAAAGCTGAATAT 59.565 34.615 0.00 0.00 0.00 1.28
3082 15408 4.586001 AGAATGACAACACCAAAGCTGAAT 59.414 37.500 0.00 0.00 0.00 2.57
3152 15478 6.604396 ACATATCCAAGCAGATTGATGAAACA 59.396 34.615 0.00 0.00 41.83 2.83
3235 15604 5.499652 CGTCACACGCATTATTAGGTTGTAC 60.500 44.000 0.00 0.00 33.65 2.90
3245 15614 2.223249 GCAATTCCGTCACACGCATTAT 60.223 45.455 0.00 0.00 40.91 1.28
3246 15615 1.129624 GCAATTCCGTCACACGCATTA 59.870 47.619 0.00 0.00 40.91 1.90
3517 15896 7.839680 TTGATACTATATGACTCAGGAGCAA 57.160 36.000 0.00 0.00 0.00 3.91
3607 15988 8.214721 TGTTTGTGTGAATGTACTACAAATGA 57.785 30.769 0.00 0.00 41.50 2.57
3639 16022 5.235616 CCGCCGAAACTTACACATTATACAT 59.764 40.000 0.00 0.00 0.00 2.29
3661 16044 0.179084 ACCACACACTTGAGACACCG 60.179 55.000 0.00 0.00 0.00 4.94
3688 16071 4.098044 GCCTTCCTCTTATACTTTTTGGGC 59.902 45.833 0.00 0.00 0.00 5.36
3737 16120 9.717892 GCTAATTAAGAAGAAAATAAGAACGGG 57.282 33.333 0.00 0.00 0.00 5.28
3841 16247 6.016943 TGGAACAACTTAACAGAATTAACCGG 60.017 38.462 0.00 0.00 31.92 5.28
3962 16373 1.142870 CACCAAAACCACCTCCTCTCA 59.857 52.381 0.00 0.00 0.00 3.27
4057 16468 5.758296 GCACCCATCATATATATACAACCGG 59.242 44.000 0.00 0.00 0.00 5.28
4244 16658 8.470805 TCAAGTACAATCTTAACCTTGCAAAAA 58.529 29.630 0.00 0.00 0.00 1.94
4355 16769 2.498078 AGAGAAAGGGTAGCTCGAAAGG 59.502 50.000 0.00 0.00 33.98 3.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.