Multiple sequence alignment - TraesCS3A01G036200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G036200 chr3A 100.000 5618 0 0 1 5618 19969443 19975060 0.000000e+00 10375.0
1 TraesCS3A01G036200 chr3A 81.818 88 14 2 5167 5252 44793688 44793775 7.810000e-09 73.1
2 TraesCS3A01G036200 chr3D 88.592 2840 162 69 178 2910 16635449 16632665 0.000000e+00 3301.0
3 TraesCS3A01G036200 chr3D 86.763 1594 152 33 3808 5393 16631895 16630353 0.000000e+00 1720.0
4 TraesCS3A01G036200 chr3D 88.473 347 37 3 3079 3424 16632577 16632233 3.130000e-112 416.0
5 TraesCS3A01G036200 chr3D 90.598 117 3 1 78 186 16639428 16639312 1.260000e-31 148.0
6 TraesCS3A01G036200 chr3D 81.053 190 28 6 3522 3710 16632222 16632040 1.630000e-30 145.0
7 TraesCS3A01G036200 chr3B 90.476 2457 179 25 469 2900 24060995 24058569 0.000000e+00 3190.0
8 TraesCS3A01G036200 chr3B 86.873 1097 111 15 3812 4902 24057772 24056703 0.000000e+00 1197.0
9 TraesCS3A01G036200 chr3B 97.091 550 14 1 1138 1685 20999704 21000253 0.000000e+00 926.0
10 TraesCS3A01G036200 chr3B 96.370 303 11 0 2741 3043 21000272 21000574 3.020000e-137 499.0
11 TraesCS3A01G036200 chr3B 88.761 347 36 3 3079 3424 24058472 24058128 6.730000e-114 422.0
12 TraesCS3A01G036200 chr3B 80.795 302 30 12 11 290 24069501 24069206 1.590000e-50 211.0
13 TraesCS3A01G036200 chr3B 80.682 176 25 6 3537 3710 24058102 24057934 1.640000e-25 128.0
14 TraesCS3A01G036200 chr3B 93.902 82 4 1 5537 5617 24056427 24056346 7.640000e-24 122.0
15 TraesCS3A01G036200 chr1B 87.618 953 98 7 3803 4753 170583221 170584155 0.000000e+00 1088.0
16 TraesCS3A01G036200 chr1B 94.461 686 36 2 2741 3424 170578176 170578861 0.000000e+00 1055.0
17 TraesCS3A01G036200 chr1B 95.985 548 16 1 1138 1685 170577616 170578157 0.000000e+00 885.0
18 TraesCS3A01G036200 chr1B 81.006 179 22 12 3535 3707 170582887 170583059 1.270000e-26 132.0
19 TraesCS3A01G036200 chr5A 93.646 724 37 5 2741 3460 708969504 708968786 0.000000e+00 1074.0
20 TraesCS3A01G036200 chr5A 96.732 306 7 1 1140 1445 708967642 708967944 1.810000e-139 507.0
21 TraesCS3A01G036200 chr5A 95.439 285 7 1 1138 1422 708974007 708973729 3.090000e-122 449.0
22 TraesCS3A01G036200 chr5A 83.992 481 61 5 3803 4281 708968454 708967988 1.110000e-121 448.0
23 TraesCS3A01G036200 chr5A 87.654 162 3 4 1444 1605 708973739 708973595 7.480000e-39 172.0
24 TraesCS3A01G036200 chr5A 78.974 195 29 12 3522 3710 708968801 708968613 7.640000e-24 122.0
25 TraesCS3A01G036200 chr5A 76.056 213 36 9 5197 5403 665763404 665763201 4.630000e-16 97.1
26 TraesCS3A01G036200 chr2B 95.217 669 29 3 2741 3407 603916544 603917211 0.000000e+00 1055.0
27 TraesCS3A01G036200 chr2B 86.688 954 94 13 3803 4753 603917706 603918629 0.000000e+00 1027.0
28 TraesCS3A01G036200 chr2B 95.255 548 14 1 1138 1685 603915990 603916525 0.000000e+00 857.0
29 TraesCS3A01G036200 chr2B 81.006 179 22 12 3535 3707 603917372 603917544 1.270000e-26 132.0
30 TraesCS3A01G036200 chr1A 88.617 817 77 5 3938 4753 586115802 586115001 0.000000e+00 979.0
31 TraesCS3A01G036200 chr1A 97.263 548 12 2 1138 1685 586120875 586120331 0.000000e+00 926.0
32 TraesCS3A01G036200 chr1A 95.380 368 17 0 2741 3108 586120312 586119945 2.260000e-163 586.0
33 TraesCS3A01G036200 chr1A 91.690 361 22 4 3104 3460 586117794 586117438 1.410000e-135 494.0
34 TraesCS3A01G036200 chr1A 80.513 195 26 12 3522 3710 586117453 586117265 7.590000e-29 139.0
35 TraesCS3A01G036200 chr2A 93.066 548 16 4 1138 1685 27111788 27111263 0.000000e+00 782.0
36 TraesCS3A01G036200 chr2A 97.800 409 9 0 1277 1685 546771816 546772224 0.000000e+00 706.0
37 TraesCS3A01G036200 chr2A 96.370 303 11 0 2741 3043 546772243 546772545 3.020000e-137 499.0
38 TraesCS3A01G036200 chr2A 96.040 303 12 0 2741 3043 27111244 27110942 1.410000e-135 494.0
39 TraesCS3A01G036200 chr2A 78.421 380 66 12 5114 5491 144270081 144269716 3.380000e-57 233.0
40 TraesCS3A01G036200 chr2A 78.485 330 54 12 5167 5489 12913772 12913453 3.430000e-47 200.0
41 TraesCS3A01G036200 chr2D 79.612 412 55 18 5096 5490 136171531 136171132 9.280000e-68 268.0
42 TraesCS3A01G036200 chr7A 79.310 116 18 5 5146 5259 63104484 63104373 6.040000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G036200 chr3A 19969443 19975060 5617 False 10375.00 10375 100.000000 1 5618 1 chr3A.!!$F1 5617
1 TraesCS3A01G036200 chr3D 16630353 16639428 9075 True 1146.00 3301 87.095800 78 5393 5 chr3D.!!$R1 5315
2 TraesCS3A01G036200 chr3B 24056346 24060995 4649 True 1011.80 3190 88.138800 469 5617 5 chr3B.!!$R2 5148
3 TraesCS3A01G036200 chr3B 20999704 21000574 870 False 712.50 926 96.730500 1138 3043 2 chr3B.!!$F1 1905
4 TraesCS3A01G036200 chr1B 170577616 170578861 1245 False 970.00 1055 95.223000 1138 3424 2 chr1B.!!$F1 2286
5 TraesCS3A01G036200 chr1B 170582887 170584155 1268 False 610.00 1088 84.312000 3535 4753 2 chr1B.!!$F2 1218
6 TraesCS3A01G036200 chr5A 708967988 708969504 1516 True 548.00 1074 85.537333 2741 4281 3 chr5A.!!$R2 1540
7 TraesCS3A01G036200 chr2B 603915990 603918629 2639 False 767.75 1055 89.541500 1138 4753 4 chr2B.!!$F1 3615
8 TraesCS3A01G036200 chr1A 586115001 586120875 5874 True 624.80 979 90.692600 1138 4753 5 chr1A.!!$R1 3615
9 TraesCS3A01G036200 chr2A 27110942 27111788 846 True 638.00 782 94.553000 1138 3043 2 chr2A.!!$R3 1905
10 TraesCS3A01G036200 chr2A 546771816 546772545 729 False 602.50 706 97.085000 1277 3043 2 chr2A.!!$F1 1766

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
333 4233 0.248458 AACGAAAAGCCGCACACTTG 60.248 50.0 0.00 0.0 0.00 3.16 F
435 4344 0.738762 CAGCTGGACTCACCACGATG 60.739 60.0 5.57 0.0 44.64 3.84 F
2143 6154 0.026803 GATCGGCAATGCTCGTGAAC 59.973 55.0 4.82 0.0 0.00 3.18 F
2229 6240 0.042731 ATTCTGGTCCGAGGAGGGAA 59.957 55.0 0.00 0.0 41.52 3.97 F
3476 9774 0.104304 GGTAGGGCTGTGTGTATCCG 59.896 60.0 0.00 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2031 6042 0.035317 TGCGCAACATCCTCTGTTCT 59.965 50.0 8.16 0.00 44.99 3.01 R
2391 6405 0.249405 AGGCAAATGCAACCGTGTTG 60.249 50.0 7.80 11.12 44.36 3.33 R
3457 9755 0.104304 CGGATACACACAGCCCTACC 59.896 60.0 0.00 0.00 0.00 3.18 R
3858 10239 0.393448 TACACACGCCAAAGCCTACA 59.607 50.0 0.00 0.00 34.57 2.74 R
5322 12884 0.035317 ATTCAGGCAGCTCGTGACAA 59.965 50.0 7.69 0.00 39.08 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.816984 GGAGGGCGGACGAGGAGA 62.817 72.222 0.00 0.00 0.00 3.71
31 32 3.213402 GAGGGCGGACGAGGAGAG 61.213 72.222 0.00 0.00 0.00 3.20
34 35 3.894947 GGCGGACGAGGAGAGCTC 61.895 72.222 5.27 5.27 0.00 4.09
40 41 2.401592 CGAGGAGAGCTCGTGTCG 59.598 66.667 16.60 16.60 39.25 4.35
41 42 2.795297 GAGGAGAGCTCGTGTCGG 59.205 66.667 8.37 0.00 0.00 4.79
42 43 3.404141 GAGGAGAGCTCGTGTCGGC 62.404 68.421 8.37 0.00 0.00 5.54
43 44 3.749064 GGAGAGCTCGTGTCGGCA 61.749 66.667 8.37 0.00 0.00 5.69
44 45 2.505118 GAGAGCTCGTGTCGGCAC 60.505 66.667 10.89 10.89 41.97 5.01
45 46 3.973267 GAGAGCTCGTGTCGGCACC 62.973 68.421 15.72 0.00 42.39 5.01
46 47 4.057428 GAGCTCGTGTCGGCACCT 62.057 66.667 15.72 5.77 42.39 4.00
47 48 4.363990 AGCTCGTGTCGGCACCTG 62.364 66.667 15.72 8.63 42.39 4.00
73 74 3.844090 TGCGCCACGGCTATGCTA 61.844 61.111 4.18 0.00 39.32 3.49
74 75 3.338676 GCGCCACGGCTATGCTAC 61.339 66.667 6.48 0.00 39.32 3.58
75 76 2.661866 CGCCACGGCTATGCTACC 60.662 66.667 6.48 0.00 39.32 3.18
76 77 2.822399 GCCACGGCTATGCTACCT 59.178 61.111 0.00 0.00 38.26 3.08
91 92 0.932773 TACCTACCTACCCCTGGGCT 60.933 60.000 7.39 0.00 39.32 5.19
93 94 1.833049 CTACCTACCCCTGGGCTCG 60.833 68.421 7.39 0.00 39.32 5.03
131 132 0.613260 TCTTGTCATGTTCCCGAGGG 59.387 55.000 0.65 0.65 0.00 4.30
189 4069 0.531532 CTCGGCATGGTCATGGAGAC 60.532 60.000 12.23 0.00 46.83 3.36
198 4078 2.184322 CATGGAGACGGGTCGTGG 59.816 66.667 0.00 0.00 41.37 4.94
203 4083 3.644399 GAGACGGGTCGTGGAAGCC 62.644 68.421 0.00 0.00 41.37 4.35
267 4156 4.946038 CATGGGCCATGGCTTTTG 57.054 55.556 34.26 23.85 38.11 2.44
327 4227 3.500680 AGAAATCTAAACGAAAAGCCGCA 59.499 39.130 0.00 0.00 0.00 5.69
333 4233 0.248458 AACGAAAAGCCGCACACTTG 60.248 50.000 0.00 0.00 0.00 3.16
387 4288 4.993705 AACTCCAGAACCAATTCCACTA 57.006 40.909 0.00 0.00 35.18 2.74
388 4289 4.559862 ACTCCAGAACCAATTCCACTAG 57.440 45.455 0.00 0.00 35.18 2.57
389 4290 3.274288 CTCCAGAACCAATTCCACTAGC 58.726 50.000 0.00 0.00 35.18 3.42
390 4291 2.912956 TCCAGAACCAATTCCACTAGCT 59.087 45.455 0.00 0.00 35.18 3.32
391 4292 4.101114 TCCAGAACCAATTCCACTAGCTA 58.899 43.478 0.00 0.00 35.18 3.32
396 4297 3.107601 ACCAATTCCACTAGCTAGCTCA 58.892 45.455 23.26 7.11 0.00 4.26
434 4343 1.593787 CAGCTGGACTCACCACGAT 59.406 57.895 5.57 0.00 44.64 3.73
435 4344 0.738762 CAGCTGGACTCACCACGATG 60.739 60.000 5.57 0.00 44.64 3.84
443 4352 2.961424 TCACCACGATGAGAGCTCA 58.039 52.632 17.77 2.23 44.59 4.26
461 4387 2.514824 GAGCTCCCGTTCATGGCC 60.515 66.667 0.87 0.00 0.00 5.36
463 4389 2.825836 GCTCCCGTTCATGGCCAG 60.826 66.667 13.05 3.43 0.00 4.85
609 4580 2.575993 GAGAGAAGGCTGCTGCGA 59.424 61.111 0.00 0.00 40.82 5.10
610 4581 1.519013 GAGAGAAGGCTGCTGCGAG 60.519 63.158 0.00 0.00 40.82 5.03
611 4582 3.194308 GAGAAGGCTGCTGCGAGC 61.194 66.667 0.00 13.36 42.82 5.03
656 4627 1.882352 GCTTTCCTTTCCTTCCTCGCA 60.882 52.381 0.00 0.00 0.00 5.10
673 4644 1.663702 CAACGCGTCGTCTTTCCCT 60.664 57.895 14.44 0.00 39.99 4.20
850 4821 0.907704 TACAACATCCTCCACGCCCT 60.908 55.000 0.00 0.00 0.00 5.19
941 4919 3.775654 GACCTGACCGGAGCCTGG 61.776 72.222 9.46 12.63 36.31 4.45
944 4922 3.775654 CTGACCGGAGCCTGGGAC 61.776 72.222 9.46 0.53 0.00 4.46
987 4982 4.265056 GTTGTGGTGGCGGGAGGT 62.265 66.667 0.00 0.00 0.00 3.85
988 4983 4.263572 TTGTGGTGGCGGGAGGTG 62.264 66.667 0.00 0.00 0.00 4.00
1417 5418 1.330655 GGGAGGAGACAATGAGCCGA 61.331 60.000 0.00 0.00 0.00 5.54
1942 5947 1.300481 CAGCTCTGATGTGGATGCAG 58.700 55.000 0.00 0.00 0.00 4.41
2013 6018 2.590007 AGATCGAGCAATGCCGGC 60.590 61.111 22.73 22.73 0.00 6.13
2143 6154 0.026803 GATCGGCAATGCTCGTGAAC 59.973 55.000 4.82 0.00 0.00 3.18
2193 6204 3.372206 CACACAATTCTGGCAGTAGTAGC 59.628 47.826 15.27 0.00 0.00 3.58
2229 6240 0.042731 ATTCTGGTCCGAGGAGGGAA 59.957 55.000 0.00 0.00 41.52 3.97
2234 6245 1.734748 GTCCGAGGAGGGAATCGAC 59.265 63.158 0.00 0.00 41.40 4.20
2308 6319 1.904865 TCGGCGTCCACAAGTAGGT 60.905 57.895 6.85 0.00 0.00 3.08
2388 6402 0.107945 CAGCCAGTAACAGAGGAGGC 60.108 60.000 0.00 0.00 42.31 4.70
2391 6405 1.153549 CAGTAACAGAGGAGGCCGC 60.154 63.158 0.00 0.00 0.00 6.53
2397 6411 4.379243 AGAGGAGGCCGCAACACG 62.379 66.667 9.31 0.00 43.15 4.49
2441 6455 2.201022 CGAGACCGGTATCCAGGGG 61.201 68.421 22.96 5.17 0.00 4.79
2484 6501 1.985116 GAACAGAGGGCTCCGAGGT 60.985 63.158 0.00 0.00 0.00 3.85
2501 6518 1.065199 AGGTACACACTCCGATACCGA 60.065 52.381 0.00 0.00 41.71 4.69
2513 6530 2.285220 CCGATACCGATTGCACAAGAAG 59.715 50.000 0.00 0.00 38.22 2.85
2530 6547 4.910585 GGCCGGTGGTAGATGCCG 62.911 72.222 1.90 0.00 44.55 5.69
2646 6663 3.010420 GTCTGATAGGGTTGAACCAAGC 58.990 50.000 17.27 6.96 41.02 4.01
2703 6720 1.743958 CAAGAGCTCATTTCTGCCCTG 59.256 52.381 17.77 0.00 0.00 4.45
2736 6753 0.610232 ACACCTCAGCATCCCAAAGC 60.610 55.000 0.00 0.00 0.00 3.51
2744 6761 2.821969 CAGCATCCCAAAGCAGTAACTT 59.178 45.455 0.00 0.00 0.00 2.66
2958 6975 8.812147 TTGATAGTATGTCCATACGATGAAAC 57.188 34.615 15.01 4.68 46.18 2.78
3286 9458 2.436646 AATCAGCCGAGCCCAACG 60.437 61.111 0.00 0.00 0.00 4.10
3349 9521 5.694995 TCAGGAAGTCCAACTGAAAAGATT 58.305 37.500 0.00 0.00 38.22 2.40
3354 9526 6.294010 GGAAGTCCAACTGAAAAGATTGGTAC 60.294 42.308 2.39 0.00 42.95 3.34
3355 9527 4.755123 AGTCCAACTGAAAAGATTGGTACG 59.245 41.667 2.39 0.00 42.95 3.67
3383 9557 6.618770 TTTTGTAACACATTGAACGTTGTG 57.381 33.333 14.87 14.87 46.76 3.33
3424 9722 1.348008 TAGCTAGCAGCCCCAGCAAT 61.348 55.000 18.83 0.00 43.77 3.56
3425 9723 1.149174 GCTAGCAGCCCCAGCAATA 59.851 57.895 10.63 0.00 43.56 1.90
3426 9724 0.251077 GCTAGCAGCCCCAGCAATAT 60.251 55.000 10.63 0.00 43.56 1.28
3427 9725 1.820877 GCTAGCAGCCCCAGCAATATT 60.821 52.381 10.63 0.00 43.56 1.28
3428 9726 2.157738 CTAGCAGCCCCAGCAATATTC 58.842 52.381 0.00 0.00 43.56 1.75
3430 9728 1.776667 AGCAGCCCCAGCAATATTCTA 59.223 47.619 0.00 0.00 43.56 2.10
3431 9729 2.157738 GCAGCCCCAGCAATATTCTAG 58.842 52.381 0.00 0.00 43.56 2.43
3432 9730 2.157738 CAGCCCCAGCAATATTCTAGC 58.842 52.381 0.00 0.00 43.56 3.42
3433 9731 1.776667 AGCCCCAGCAATATTCTAGCA 59.223 47.619 0.00 0.00 43.56 3.49
3466 9764 9.091220 AGTTATCTATAAAACTAGGTAGGGCTG 57.909 37.037 0.00 0.00 34.23 4.85
3467 9765 8.868103 GTTATCTATAAAACTAGGTAGGGCTGT 58.132 37.037 0.00 0.00 0.00 4.40
3468 9766 6.726490 TCTATAAAACTAGGTAGGGCTGTG 57.274 41.667 0.00 0.00 0.00 3.66
3469 9767 6.200114 TCTATAAAACTAGGTAGGGCTGTGT 58.800 40.000 0.00 0.00 0.00 3.72
3470 9768 3.418684 AAAACTAGGTAGGGCTGTGTG 57.581 47.619 0.00 0.00 0.00 3.82
3471 9769 2.025636 AACTAGGTAGGGCTGTGTGT 57.974 50.000 0.00 0.00 0.00 3.72
3472 9770 2.913603 ACTAGGTAGGGCTGTGTGTA 57.086 50.000 0.00 0.00 0.00 2.90
3473 9771 3.399952 ACTAGGTAGGGCTGTGTGTAT 57.600 47.619 0.00 0.00 0.00 2.29
3474 9772 3.297736 ACTAGGTAGGGCTGTGTGTATC 58.702 50.000 0.00 0.00 0.00 2.24
3475 9773 1.497161 AGGTAGGGCTGTGTGTATCC 58.503 55.000 0.00 0.00 0.00 2.59
3476 9774 0.104304 GGTAGGGCTGTGTGTATCCG 59.896 60.000 0.00 0.00 0.00 4.18
3477 9775 0.529992 GTAGGGCTGTGTGTATCCGC 60.530 60.000 0.00 0.00 0.00 5.54
3478 9776 2.011741 TAGGGCTGTGTGTATCCGCG 62.012 60.000 0.00 0.00 0.00 6.46
3479 9777 2.890474 GGCTGTGTGTATCCGCGG 60.890 66.667 22.12 22.12 0.00 6.46
3480 9778 2.183300 GCTGTGTGTATCCGCGGA 59.817 61.111 33.12 33.12 0.00 5.54
3481 9779 1.227263 GCTGTGTGTATCCGCGGAT 60.227 57.895 39.97 39.97 38.54 4.18
3482 9780 1.490693 GCTGTGTGTATCCGCGGATG 61.491 60.000 43.28 28.20 36.17 3.51
3483 9781 1.490693 CTGTGTGTATCCGCGGATGC 61.491 60.000 43.28 41.18 37.67 3.91
3484 9782 1.520564 GTGTGTATCCGCGGATGCA 60.521 57.895 42.86 42.86 43.11 3.96
3485 9783 1.227234 TGTGTATCCGCGGATGCAG 60.227 57.895 45.60 15.05 45.20 4.41
3486 9784 1.067416 GTGTATCCGCGGATGCAGA 59.933 57.895 45.60 29.79 45.20 4.26
3487 9785 0.941463 GTGTATCCGCGGATGCAGAG 60.941 60.000 45.60 13.53 45.20 3.35
3488 9786 1.373497 GTATCCGCGGATGCAGAGG 60.373 63.158 43.28 8.96 42.97 3.69
3489 9787 1.832608 TATCCGCGGATGCAGAGGT 60.833 57.895 43.28 23.21 42.97 3.85
3490 9788 1.399744 TATCCGCGGATGCAGAGGTT 61.400 55.000 43.28 22.48 42.97 3.50
3491 9789 2.930385 ATCCGCGGATGCAGAGGTTG 62.930 60.000 38.62 1.24 42.97 3.77
3492 9790 3.197790 CGCGGATGCAGAGGTTGG 61.198 66.667 0.00 0.00 42.97 3.77
3493 9791 2.825836 GCGGATGCAGAGGTTGGG 60.826 66.667 0.00 0.00 42.15 4.12
3494 9792 2.989639 CGGATGCAGAGGTTGGGA 59.010 61.111 0.00 0.00 0.00 4.37
3495 9793 1.153289 CGGATGCAGAGGTTGGGAG 60.153 63.158 0.00 0.00 0.00 4.30
3496 9794 1.225704 GGATGCAGAGGTTGGGAGG 59.774 63.158 0.00 0.00 0.00 4.30
3497 9795 1.225704 GATGCAGAGGTTGGGAGGG 59.774 63.158 0.00 0.00 0.00 4.30
3498 9796 1.542375 ATGCAGAGGTTGGGAGGGT 60.542 57.895 0.00 0.00 0.00 4.34
3499 9797 1.142688 ATGCAGAGGTTGGGAGGGTT 61.143 55.000 0.00 0.00 0.00 4.11
3500 9798 0.474854 TGCAGAGGTTGGGAGGGTTA 60.475 55.000 0.00 0.00 0.00 2.85
3501 9799 0.696501 GCAGAGGTTGGGAGGGTTAA 59.303 55.000 0.00 0.00 0.00 2.01
3502 9800 1.613520 GCAGAGGTTGGGAGGGTTAAC 60.614 57.143 0.00 0.00 0.00 2.01
3503 9801 1.004394 CAGAGGTTGGGAGGGTTAACC 59.996 57.143 16.85 16.85 43.22 2.85
3556 9854 3.384668 GTTGAAAGGCCTTTTCTGAAGC 58.615 45.455 30.89 16.78 44.49 3.86
3566 9864 4.271049 GCCTTTTCTGAAGCAAGGAAAAAC 59.729 41.667 20.05 3.45 39.73 2.43
3573 9871 2.877043 AGCAAGGAAAAACTGTGCTG 57.123 45.000 0.00 0.00 43.66 4.41
3575 9873 1.538849 GCAAGGAAAAACTGTGCTGGG 60.539 52.381 0.00 0.00 32.43 4.45
3578 9876 2.031870 AGGAAAAACTGTGCTGGGAAC 58.968 47.619 0.00 0.00 0.00 3.62
3585 9883 3.127425 ACTGTGCTGGGAACTAAACTC 57.873 47.619 0.00 0.00 0.00 3.01
3597 9895 5.886474 GGGAACTAAACTCTCCCCTTTATTG 59.114 44.000 0.00 0.00 42.77 1.90
3609 9907 7.695055 TCTCCCCTTTATTGATTTACTCAACA 58.305 34.615 0.00 0.00 46.37 3.33
3634 9932 6.162079 TCTGTTGCTGATCTGAAGTAGAAAG 58.838 40.000 3.42 0.00 39.30 2.62
3636 9934 6.524734 TGTTGCTGATCTGAAGTAGAAAGAA 58.475 36.000 3.42 0.00 39.30 2.52
3637 9935 6.992123 TGTTGCTGATCTGAAGTAGAAAGAAA 59.008 34.615 3.42 0.00 39.30 2.52
3638 9936 7.498900 TGTTGCTGATCTGAAGTAGAAAGAAAA 59.501 33.333 3.42 0.00 39.30 2.29
3641 9939 8.725148 TGCTGATCTGAAGTAGAAAGAAAAATC 58.275 33.333 3.42 0.00 39.30 2.17
3647 9953 7.709182 TCTGAAGTAGAAAGAAAAATCGTGACA 59.291 33.333 0.00 0.00 30.84 3.58
3676 9982 8.197439 ACCTTAAATGAATAGCTATGTTTTGCC 58.803 33.333 7.09 0.00 0.00 4.52
3707 10013 1.117994 TGGCCACAAAACAGATTGCA 58.882 45.000 0.00 0.00 33.52 4.08
3807 10154 9.900710 GACATCGTTCTGTTATGATATACTCTT 57.099 33.333 0.00 0.00 0.00 2.85
3829 10210 7.151308 TCTTTCTAGAGAGAAGCTTGAAACAG 58.849 38.462 10.44 0.00 42.66 3.16
3832 10213 6.219473 TCTAGAGAGAAGCTTGAAACAGTTG 58.781 40.000 2.10 0.00 0.00 3.16
3848 10229 5.964958 ACAGTTGTGATTTACAGAATGGG 57.035 39.130 0.00 0.00 43.62 4.00
3852 10233 5.243730 AGTTGTGATTTACAGAATGGGTTGG 59.756 40.000 0.00 0.00 43.62 3.77
3856 10237 6.071447 TGTGATTTACAGAATGGGTTGGATTG 60.071 38.462 0.00 0.00 43.62 2.67
3857 10238 5.421693 TGATTTACAGAATGGGTTGGATTGG 59.578 40.000 0.00 0.00 43.62 3.16
3858 10239 2.999185 ACAGAATGGGTTGGATTGGT 57.001 45.000 0.00 0.00 43.62 3.67
3864 10245 0.039035 TGGGTTGGATTGGTGTAGGC 59.961 55.000 0.00 0.00 0.00 3.93
3869 10250 2.214376 TGGATTGGTGTAGGCTTTGG 57.786 50.000 0.00 0.00 0.00 3.28
3888 10269 2.764010 TGGCGTGTGTAATGGAGTAGAT 59.236 45.455 0.00 0.00 0.00 1.98
3915 10298 6.513180 TGATGATAACGTATGGTTTCTCCTC 58.487 40.000 0.00 0.00 40.09 3.71
3916 10299 5.272283 TGATAACGTATGGTTTCTCCTCC 57.728 43.478 0.00 0.00 40.09 4.30
3995 11547 8.588472 TCTCTTCAATTTAGAGTCTGACATTGA 58.412 33.333 10.88 12.40 40.04 2.57
3996 11548 8.768957 TCTTCAATTTAGAGTCTGACATTGAG 57.231 34.615 10.88 9.54 33.39 3.02
4000 11552 7.984050 TCAATTTAGAGTCTGACATTGAGGATC 59.016 37.037 10.88 0.00 0.00 3.36
4003 11555 3.705579 AGAGTCTGACATTGAGGATCTGG 59.294 47.826 10.88 0.00 34.92 3.86
4006 11558 1.489649 CTGACATTGAGGATCTGGCCT 59.510 52.381 3.32 0.00 42.17 5.19
4014 11566 0.549950 AGGATCTGGCCTTGTCCATG 59.450 55.000 18.78 0.00 33.46 3.66
4031 11583 1.195448 CATGGACACAACGAAGACTGC 59.805 52.381 0.00 0.00 0.00 4.40
4034 11586 0.233332 GACACAACGAAGACTGCTGC 59.767 55.000 0.00 0.00 0.00 5.25
4036 11588 0.234106 CACAACGAAGACTGCTGCTG 59.766 55.000 4.89 4.89 0.00 4.41
4037 11589 1.206072 CAACGAAGACTGCTGCTGC 59.794 57.895 8.89 8.89 40.20 5.25
4038 11590 1.070445 AACGAAGACTGCTGCTGCT 59.930 52.632 17.00 0.00 40.48 4.24
4039 11591 1.226686 AACGAAGACTGCTGCTGCTG 61.227 55.000 18.66 18.66 42.70 4.41
4040 11592 2.868920 GAAGACTGCTGCTGCTGC 59.131 61.111 22.51 22.51 41.07 5.25
4041 11593 1.671704 GAAGACTGCTGCTGCTGCT 60.672 57.895 27.67 12.31 41.07 4.24
4042 11594 1.637478 GAAGACTGCTGCTGCTGCTC 61.637 60.000 27.67 19.24 41.07 4.26
4043 11595 2.358369 GACTGCTGCTGCTGCTCA 60.358 61.111 27.67 12.82 41.07 4.26
4044 11596 1.745864 GACTGCTGCTGCTGCTCAT 60.746 57.895 27.67 15.45 41.07 2.90
4045 11597 1.983196 GACTGCTGCTGCTGCTCATG 61.983 60.000 27.67 18.12 41.07 3.07
4046 11598 2.750237 TGCTGCTGCTGCTCATGG 60.750 61.111 27.67 3.49 40.48 3.66
4047 11599 2.750637 GCTGCTGCTGCTCATGGT 60.751 61.111 22.10 0.00 40.48 3.55
4048 11600 3.052620 GCTGCTGCTGCTCATGGTG 62.053 63.158 22.10 0.29 40.48 4.17
4049 11601 2.360726 TGCTGCTGCTCATGGTGG 60.361 61.111 17.00 0.00 40.48 4.61
4092 11644 3.777106 TGTGTTCAAAGCTCTCCAGAT 57.223 42.857 0.00 0.00 0.00 2.90
4108 11660 6.955364 TCTCCAGATCATGATTTTGAGTTCT 58.045 36.000 20.36 6.36 0.00 3.01
4110 11662 7.336176 TCTCCAGATCATGATTTTGAGTTCTTG 59.664 37.037 20.36 5.64 0.00 3.02
4149 11701 0.960364 TCGGAGAGGCCATTGCAAAC 60.960 55.000 5.01 0.00 40.13 2.93
4179 11731 0.767375 TTCTGGACAGCAGCCTCTTT 59.233 50.000 0.00 0.00 0.00 2.52
4203 11755 1.204941 GGCACACCGTCAAGTCTATCT 59.795 52.381 0.00 0.00 0.00 1.98
4256 11808 1.009389 GTTGAGGTCGTCTTCTGCGG 61.009 60.000 0.00 0.00 0.00 5.69
4257 11809 2.507324 GAGGTCGTCTTCTGCGGC 60.507 66.667 0.00 0.00 0.00 6.53
4275 11827 2.592308 GGATCGGGGAGCAGCTTT 59.408 61.111 0.00 0.00 0.00 3.51
4278 11830 2.543067 GATCGGGGAGCAGCTTTGGT 62.543 60.000 0.00 0.00 0.00 3.67
4281 11833 1.667722 GGGGAGCAGCTTTGGTTTG 59.332 57.895 0.00 0.00 0.00 2.93
4287 11839 1.959282 AGCAGCTTTGGTTTGAAGGAG 59.041 47.619 0.00 0.00 0.00 3.69
4296 11848 3.820557 TGGTTTGAAGGAGGAGAACAAG 58.179 45.455 0.00 0.00 0.00 3.16
4298 11850 4.410883 TGGTTTGAAGGAGGAGAACAAGTA 59.589 41.667 0.00 0.00 0.00 2.24
4305 11857 2.036862 GGAGGAGAACAAGTACCAACGT 59.963 50.000 0.00 0.00 0.00 3.99
4315 11867 4.141869 ACAAGTACCAACGTACCAACTTCT 60.142 41.667 0.00 0.00 45.16 2.85
4354 11906 0.241481 GTCGCTGGACTCGAAGTTCT 59.759 55.000 0.56 0.00 40.15 3.01
4458 12010 0.975040 AAGAGATCGGCAGCTGGAGT 60.975 55.000 17.12 0.00 0.00 3.85
4552 12104 1.446099 GAGGCGTTCGACATCAGCA 60.446 57.895 0.00 0.00 0.00 4.41
4560 12112 0.179076 TCGACATCAGCATCGCCATT 60.179 50.000 0.00 0.00 38.24 3.16
4580 12132 1.208776 TGAGGACGACATACTCGAGGA 59.791 52.381 18.41 9.15 46.14 3.71
4680 12235 6.200854 CGCATGAGTAACACTTTGCAGATATA 59.799 38.462 0.00 0.00 37.44 0.86
4681 12236 7.095481 CGCATGAGTAACACTTTGCAGATATAT 60.095 37.037 0.00 0.00 37.44 0.86
4738 12293 4.557895 CGTCATGTAGTAATATGGACGCCA 60.558 45.833 0.00 1.01 38.19 5.69
4741 12296 3.032459 TGTAGTAATATGGACGCCACCA 58.968 45.455 0.50 0.00 44.41 4.17
4774 12333 9.506018 GGTTATTTTCCCTTTTGTGTACTACTA 57.494 33.333 0.00 0.00 0.00 1.82
4870 12431 4.922206 TCACTGAATAATGCCAAGGACTT 58.078 39.130 0.00 0.00 0.00 3.01
4897 12458 5.554070 AGCTTTTATGGTACGGTTGTAGTT 58.446 37.500 0.00 0.00 0.00 2.24
4902 12463 3.220507 TGGTACGGTTGTAGTTCATCG 57.779 47.619 0.00 0.00 0.00 3.84
4904 12465 3.755905 TGGTACGGTTGTAGTTCATCGTA 59.244 43.478 0.00 0.00 37.44 3.43
4908 12469 6.020360 GGTACGGTTGTAGTTCATCGTATTTC 60.020 42.308 8.33 0.00 39.07 2.17
4942 12503 0.321671 TTGCTGGAGCTCCTGTGTAC 59.678 55.000 32.69 20.28 42.66 2.90
5000 12561 4.951715 TGATGGAAGAAATCAAGGTGGATG 59.048 41.667 0.00 0.00 31.17 3.51
5001 12562 3.091545 TGGAAGAAATCAAGGTGGATGC 58.908 45.455 0.00 0.00 0.00 3.91
5002 12563 3.091545 GGAAGAAATCAAGGTGGATGCA 58.908 45.455 0.00 0.00 0.00 3.96
5003 12564 3.703052 GGAAGAAATCAAGGTGGATGCAT 59.297 43.478 0.00 0.00 0.00 3.96
5004 12565 4.161001 GGAAGAAATCAAGGTGGATGCATT 59.839 41.667 0.00 0.00 0.00 3.56
5005 12566 5.360714 GGAAGAAATCAAGGTGGATGCATTA 59.639 40.000 0.00 0.00 0.00 1.90
5006 12567 6.127366 GGAAGAAATCAAGGTGGATGCATTAA 60.127 38.462 0.00 0.00 0.00 1.40
5007 12568 6.461110 AGAAATCAAGGTGGATGCATTAAG 57.539 37.500 0.00 0.00 0.00 1.85
5008 12569 6.189859 AGAAATCAAGGTGGATGCATTAAGA 58.810 36.000 0.00 0.00 0.00 2.10
5009 12570 6.837568 AGAAATCAAGGTGGATGCATTAAGAT 59.162 34.615 0.00 0.00 0.00 2.40
5010 12571 7.343833 AGAAATCAAGGTGGATGCATTAAGATT 59.656 33.333 0.00 2.09 0.00 2.40
5011 12572 7.427989 AATCAAGGTGGATGCATTAAGATTT 57.572 32.000 0.00 0.00 0.00 2.17
5012 12573 6.855763 TCAAGGTGGATGCATTAAGATTTT 57.144 33.333 0.00 0.00 0.00 1.82
5026 12587 9.191995 GCATTAAGATTTTCTTTTCTTTTCGGA 57.808 29.630 0.00 0.00 37.89 4.55
5030 12591 8.648557 AAGATTTTCTTTTCTTTTCGGAAAGG 57.351 30.769 16.19 6.27 37.16 3.11
5038 12599 6.381481 TTTCTTTTCGGAAAGGAGGTTAAC 57.619 37.500 16.19 0.00 42.05 2.01
5039 12600 4.392047 TCTTTTCGGAAAGGAGGTTAACC 58.608 43.478 17.41 17.41 42.05 2.85
5068 12629 6.051074 CGGCCTCTGCATCATATTGATATTA 58.949 40.000 0.00 0.00 34.28 0.98
5069 12630 6.709397 CGGCCTCTGCATCATATTGATATTAT 59.291 38.462 0.00 0.00 34.28 1.28
5070 12631 7.874528 CGGCCTCTGCATCATATTGATATTATA 59.125 37.037 0.00 0.00 34.28 0.98
5071 12632 9.736414 GGCCTCTGCATCATATTGATATTATAT 57.264 33.333 0.00 0.00 34.28 0.86
5105 12667 5.761234 CCTTTTGCCATGATATCCAATTTGG 59.239 40.000 9.28 9.28 39.43 3.28
5107 12669 4.940905 TGCCATGATATCCAATTTGGTG 57.059 40.909 14.98 5.08 39.03 4.17
5111 12673 4.894705 CCATGATATCCAATTTGGTGTCCA 59.105 41.667 14.98 9.75 39.03 4.02
5114 12676 4.341806 TGATATCCAATTTGGTGTCCATGC 59.658 41.667 14.98 0.16 39.03 4.06
5142 12704 1.017177 GCCCGATGAACAGTAACGCA 61.017 55.000 0.00 0.00 0.00 5.24
5181 12743 5.827568 AATCGTATTTGTTTTGCAAGCAG 57.172 34.783 0.00 0.00 38.47 4.24
5227 12789 3.190874 GCAAAATTTGGTGACGTTTGGA 58.809 40.909 7.89 0.00 31.36 3.53
5241 12803 4.587520 TGGACATTCCAGGAGCCT 57.412 55.556 0.00 0.00 42.67 4.58
5242 12804 1.993653 TGGACATTCCAGGAGCCTG 59.006 57.895 9.59 9.59 42.67 4.85
5280 12842 4.771590 TTCAGGCATGAACAGTGAAATC 57.228 40.909 10.22 0.00 40.54 2.17
5281 12843 3.084039 TCAGGCATGAACAGTGAAATCC 58.916 45.455 0.00 0.00 30.61 3.01
5282 12844 2.165030 CAGGCATGAACAGTGAAATCCC 59.835 50.000 0.00 0.00 0.00 3.85
5284 12846 1.468054 GCATGAACAGTGAAATCCCGC 60.468 52.381 0.00 0.00 0.00 6.13
5285 12847 1.811965 CATGAACAGTGAAATCCCGCA 59.188 47.619 0.00 0.00 0.00 5.69
5301 12863 3.826157 TCCCGCATTTCAAATGTTTCTCT 59.174 39.130 11.80 0.00 0.00 3.10
5302 12864 4.082787 TCCCGCATTTCAAATGTTTCTCTC 60.083 41.667 11.80 0.00 0.00 3.20
5303 12865 4.321156 CCCGCATTTCAAATGTTTCTCTCA 60.321 41.667 11.80 0.00 0.00 3.27
5306 12868 6.366877 CCGCATTTCAAATGTTTCTCTCAAAT 59.633 34.615 11.80 0.00 0.00 2.32
5307 12869 7.411157 CCGCATTTCAAATGTTTCTCTCAAATC 60.411 37.037 11.80 0.00 0.00 2.17
5314 12876 8.023128 TCAAATGTTTCTCTCAAATCCGAATTC 58.977 33.333 0.00 0.00 0.00 2.17
5337 12899 3.094386 TTTTTGTCACGAGCTGCCT 57.906 47.368 0.00 0.00 0.00 4.75
5368 12930 7.315247 TCAAATATAACCAAATCTGACACGG 57.685 36.000 0.00 0.00 0.00 4.94
5375 12937 2.416547 CCAAATCTGACACGGACATCAC 59.583 50.000 0.00 0.00 0.00 3.06
5378 12940 1.036707 TCTGACACGGACATCACACA 58.963 50.000 0.00 0.00 0.00 3.72
5393 12955 5.589855 ACATCACACACTCAAACATCTTTCA 59.410 36.000 0.00 0.00 0.00 2.69
5394 12956 5.484173 TCACACACTCAAACATCTTTCAC 57.516 39.130 0.00 0.00 0.00 3.18
5397 12959 4.889409 ACACACTCAAACATCTTTCACCAT 59.111 37.500 0.00 0.00 0.00 3.55
5399 12961 6.545666 ACACACTCAAACATCTTTCACCATAA 59.454 34.615 0.00 0.00 0.00 1.90
5400 12962 7.231317 ACACACTCAAACATCTTTCACCATAAT 59.769 33.333 0.00 0.00 0.00 1.28
5401 12963 8.729756 CACACTCAAACATCTTTCACCATAATA 58.270 33.333 0.00 0.00 0.00 0.98
5402 12964 9.466497 ACACTCAAACATCTTTCACCATAATAT 57.534 29.630 0.00 0.00 0.00 1.28
5455 13017 8.477984 AGTATTTTAAACGGCGTTACTATTCA 57.522 30.769 27.05 7.00 0.00 2.57
5456 13018 8.382875 AGTATTTTAAACGGCGTTACTATTCAC 58.617 33.333 27.05 17.20 0.00 3.18
5457 13019 6.783892 TTTTAAACGGCGTTACTATTCACT 57.216 33.333 27.05 9.40 0.00 3.41
5458 13020 6.393720 TTTAAACGGCGTTACTATTCACTC 57.606 37.500 27.05 0.00 0.00 3.51
5459 13021 2.573941 ACGGCGTTACTATTCACTCC 57.426 50.000 6.77 0.00 0.00 3.85
5460 13022 1.202222 ACGGCGTTACTATTCACTCCG 60.202 52.381 6.77 0.00 41.18 4.63
5461 13023 1.849097 GGCGTTACTATTCACTCCGG 58.151 55.000 0.00 0.00 0.00 5.14
5462 13024 1.537562 GGCGTTACTATTCACTCCGGG 60.538 57.143 0.00 0.00 0.00 5.73
5463 13025 1.537562 GCGTTACTATTCACTCCGGGG 60.538 57.143 0.00 0.00 0.00 5.73
5464 13026 1.537562 CGTTACTATTCACTCCGGGGC 60.538 57.143 0.00 0.00 0.00 5.80
5465 13027 1.761198 GTTACTATTCACTCCGGGGCT 59.239 52.381 0.00 0.00 0.00 5.19
5466 13028 1.700955 TACTATTCACTCCGGGGCTC 58.299 55.000 0.00 0.00 0.00 4.70
5467 13029 0.325296 ACTATTCACTCCGGGGCTCA 60.325 55.000 0.00 0.00 0.00 4.26
5468 13030 1.051812 CTATTCACTCCGGGGCTCAT 58.948 55.000 0.00 0.00 0.00 2.90
5469 13031 2.248248 CTATTCACTCCGGGGCTCATA 58.752 52.381 0.00 0.00 0.00 2.15
5470 13032 1.734655 ATTCACTCCGGGGCTCATAT 58.265 50.000 0.00 0.00 0.00 1.78
5471 13033 0.758734 TTCACTCCGGGGCTCATATG 59.241 55.000 0.00 0.00 0.00 1.78
5472 13034 0.105709 TCACTCCGGGGCTCATATGA 60.106 55.000 0.00 5.07 0.00 2.15
5473 13035 0.319728 CACTCCGGGGCTCATATGAG 59.680 60.000 25.64 25.64 44.75 2.90
5482 13044 1.674057 CTCATATGAGCCCGGGACC 59.326 63.158 29.31 15.73 35.13 4.46
5483 13045 1.831652 CTCATATGAGCCCGGGACCC 61.832 65.000 29.31 12.80 35.13 4.46
5484 13046 2.146724 CATATGAGCCCGGGACCCA 61.147 63.158 29.31 18.65 0.00 4.51
5485 13047 1.385347 ATATGAGCCCGGGACCCAA 60.385 57.895 29.31 6.14 0.00 4.12
5486 13048 0.991355 ATATGAGCCCGGGACCCAAA 60.991 55.000 29.31 4.19 0.00 3.28
5487 13049 1.208844 TATGAGCCCGGGACCCAAAA 61.209 55.000 29.31 8.00 0.00 2.44
5488 13050 2.675423 GAGCCCGGGACCCAAAAC 60.675 66.667 29.31 2.84 0.00 2.43
5489 13051 4.653888 AGCCCGGGACCCAAAACG 62.654 66.667 29.31 0.00 0.00 3.60
5495 13057 3.292159 GGACCCAAAACGCCGCTT 61.292 61.111 0.00 0.00 0.00 4.68
5496 13058 2.254350 GACCCAAAACGCCGCTTC 59.746 61.111 0.00 0.00 0.00 3.86
5497 13059 3.263503 GACCCAAAACGCCGCTTCC 62.264 63.158 0.00 0.00 0.00 3.46
5498 13060 4.050934 CCCAAAACGCCGCTTCCC 62.051 66.667 0.00 0.00 0.00 3.97
5499 13061 2.983592 CCAAAACGCCGCTTCCCT 60.984 61.111 0.00 0.00 0.00 4.20
5500 13062 2.561037 CCAAAACGCCGCTTCCCTT 61.561 57.895 0.00 0.00 0.00 3.95
5501 13063 1.362355 CAAAACGCCGCTTCCCTTT 59.638 52.632 0.00 0.00 0.00 3.11
5502 13064 0.249280 CAAAACGCCGCTTCCCTTTT 60.249 50.000 0.00 0.00 0.00 2.27
5503 13065 0.462375 AAAACGCCGCTTCCCTTTTT 59.538 45.000 0.00 0.00 0.00 1.94
5504 13066 0.249280 AAACGCCGCTTCCCTTTTTG 60.249 50.000 0.00 0.00 0.00 2.44
5505 13067 2.430751 CGCCGCTTCCCTTTTTGC 60.431 61.111 0.00 0.00 0.00 3.68
5506 13068 2.919494 CGCCGCTTCCCTTTTTGCT 61.919 57.895 0.00 0.00 0.00 3.91
5507 13069 1.373371 GCCGCTTCCCTTTTTGCTG 60.373 57.895 0.00 0.00 0.00 4.41
5508 13070 1.290009 CCGCTTCCCTTTTTGCTGG 59.710 57.895 0.00 0.00 0.00 4.85
5509 13071 1.178534 CCGCTTCCCTTTTTGCTGGA 61.179 55.000 0.00 0.00 0.00 3.86
5510 13072 0.890683 CGCTTCCCTTTTTGCTGGAT 59.109 50.000 0.00 0.00 0.00 3.41
5511 13073 1.135286 CGCTTCCCTTTTTGCTGGATC 60.135 52.381 0.00 0.00 0.00 3.36
5512 13074 2.174360 GCTTCCCTTTTTGCTGGATCT 58.826 47.619 0.00 0.00 0.00 2.75
5513 13075 2.094338 GCTTCCCTTTTTGCTGGATCTG 60.094 50.000 0.00 0.00 0.00 2.90
5514 13076 2.978156 TCCCTTTTTGCTGGATCTGT 57.022 45.000 0.00 0.00 0.00 3.41
5515 13077 3.243359 TCCCTTTTTGCTGGATCTGTT 57.757 42.857 0.00 0.00 0.00 3.16
5516 13078 3.575805 TCCCTTTTTGCTGGATCTGTTT 58.424 40.909 0.00 0.00 0.00 2.83
5517 13079 3.966665 TCCCTTTTTGCTGGATCTGTTTT 59.033 39.130 0.00 0.00 0.00 2.43
5518 13080 4.060205 CCCTTTTTGCTGGATCTGTTTTG 58.940 43.478 0.00 0.00 0.00 2.44
5519 13081 3.495753 CCTTTTTGCTGGATCTGTTTTGC 59.504 43.478 0.00 0.00 0.00 3.68
5520 13082 2.420628 TTTGCTGGATCTGTTTTGCG 57.579 45.000 0.00 0.00 0.00 4.85
5521 13083 0.597568 TTGCTGGATCTGTTTTGCGG 59.402 50.000 0.00 0.00 0.00 5.69
5522 13084 0.250684 TGCTGGATCTGTTTTGCGGA 60.251 50.000 0.00 0.00 36.82 5.54
5523 13085 0.881118 GCTGGATCTGTTTTGCGGAA 59.119 50.000 0.00 0.00 35.86 4.30
5524 13086 1.401539 GCTGGATCTGTTTTGCGGAAC 60.402 52.381 0.00 0.00 35.86 3.62
5525 13087 2.154462 CTGGATCTGTTTTGCGGAACT 58.846 47.619 0.00 0.00 35.86 3.01
5526 13088 2.554032 CTGGATCTGTTTTGCGGAACTT 59.446 45.455 0.00 0.00 35.86 2.66
5527 13089 2.293122 TGGATCTGTTTTGCGGAACTTG 59.707 45.455 0.00 0.00 35.86 3.16
5528 13090 2.319472 GATCTGTTTTGCGGAACTTGC 58.681 47.619 0.00 0.00 35.86 4.01
5529 13091 1.098869 TCTGTTTTGCGGAACTTGCA 58.901 45.000 0.00 0.00 41.38 4.08
5534 13096 4.251246 TGCGGAACTTGCAAACCT 57.749 50.000 0.00 0.00 39.87 3.50
5535 13097 2.029743 TGCGGAACTTGCAAACCTC 58.970 52.632 0.00 0.49 39.87 3.85
5536 13098 0.465460 TGCGGAACTTGCAAACCTCT 60.465 50.000 0.00 0.00 39.87 3.69
5537 13099 0.238553 GCGGAACTTGCAAACCTCTC 59.761 55.000 0.00 0.00 0.00 3.20
5538 13100 1.593196 CGGAACTTGCAAACCTCTCA 58.407 50.000 0.00 0.00 0.00 3.27
5539 13101 1.946768 CGGAACTTGCAAACCTCTCAA 59.053 47.619 0.00 0.00 0.00 3.02
5540 13102 2.031682 CGGAACTTGCAAACCTCTCAAG 60.032 50.000 0.00 0.00 41.99 3.02
5541 13103 2.287849 GGAACTTGCAAACCTCTCAAGC 60.288 50.000 0.00 0.00 40.45 4.01
5542 13104 0.947244 ACTTGCAAACCTCTCAAGCG 59.053 50.000 0.00 0.00 40.45 4.68
5543 13105 0.386478 CTTGCAAACCTCTCAAGCGC 60.386 55.000 0.00 0.00 32.07 5.92
5546 13108 0.312102 GCAAACCTCTCAAGCGCTTT 59.688 50.000 22.51 0.93 0.00 3.51
5553 13115 2.160417 CCTCTCAAGCGCTTTAACCTTG 59.840 50.000 22.51 8.47 37.80 3.61
5563 13125 1.543802 CTTTAACCTTGCCGGCATCAA 59.456 47.619 33.25 15.52 35.61 2.57
5580 13142 2.325082 AAGCCGTTGTGATCCGTGC 61.325 57.895 0.00 0.00 0.00 5.34
5617 13179 3.499918 AGTGAGCGAGTTGGAATTTTCAG 59.500 43.478 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 4.816984 TCTCCTCGTCCGCCCTCC 62.817 72.222 0.00 0.00 0.00 4.30
14 15 3.213402 CTCTCCTCGTCCGCCCTC 61.213 72.222 0.00 0.00 0.00 4.30
17 18 3.894947 GAGCTCTCCTCGTCCGCC 61.895 72.222 6.43 0.00 0.00 6.13
24 25 2.795297 CCGACACGAGCTCTCCTC 59.205 66.667 12.85 1.89 37.22 3.71
25 26 3.444805 GCCGACACGAGCTCTCCT 61.445 66.667 12.85 0.00 0.00 3.69
26 27 3.749064 TGCCGACACGAGCTCTCC 61.749 66.667 12.85 0.00 0.00 3.71
27 28 2.505118 GTGCCGACACGAGCTCTC 60.505 66.667 12.85 1.45 36.98 3.20
59 60 0.319641 GTAGGTAGCATAGCCGTGGC 60.320 60.000 1.67 1.67 40.68 5.01
60 61 0.317479 GGTAGGTAGCATAGCCGTGG 59.683 60.000 0.00 0.00 40.68 4.94
61 62 1.329256 AGGTAGGTAGCATAGCCGTG 58.671 55.000 0.00 0.00 40.68 4.94
62 63 2.512705 GTAGGTAGGTAGCATAGCCGT 58.487 52.381 0.00 0.00 40.68 5.68
63 64 1.817447 GGTAGGTAGGTAGCATAGCCG 59.183 57.143 0.00 0.00 40.68 5.52
64 65 2.177734 GGGTAGGTAGGTAGCATAGCC 58.822 57.143 0.00 0.00 40.68 3.93
65 66 2.177734 GGGGTAGGTAGGTAGCATAGC 58.822 57.143 0.00 0.00 39.93 2.97
66 67 3.432378 CAGGGGTAGGTAGGTAGCATAG 58.568 54.545 0.00 0.00 0.00 2.23
67 68 2.111255 CCAGGGGTAGGTAGGTAGCATA 59.889 54.545 0.00 0.00 0.00 3.14
68 69 1.132817 CCAGGGGTAGGTAGGTAGCAT 60.133 57.143 0.00 0.00 0.00 3.79
69 70 0.263765 CCAGGGGTAGGTAGGTAGCA 59.736 60.000 0.00 0.00 0.00 3.49
70 71 0.471401 CCCAGGGGTAGGTAGGTAGC 60.471 65.000 0.00 0.00 0.00 3.58
71 72 0.471401 GCCCAGGGGTAGGTAGGTAG 60.471 65.000 7.91 0.00 37.65 3.18
72 73 0.932773 AGCCCAGGGGTAGGTAGGTA 60.933 60.000 9.06 0.00 37.65 3.08
73 74 2.253392 GAGCCCAGGGGTAGGTAGGT 62.253 65.000 11.27 0.00 37.65 3.08
74 75 1.459730 GAGCCCAGGGGTAGGTAGG 60.460 68.421 11.27 0.00 37.65 3.18
75 76 1.833049 CGAGCCCAGGGGTAGGTAG 60.833 68.421 11.27 0.00 37.65 3.18
76 77 1.661990 ATCGAGCCCAGGGGTAGGTA 61.662 60.000 11.27 0.00 37.65 3.08
91 92 0.464036 AAGAGCGTAATGGCCATCGA 59.536 50.000 26.15 12.90 0.00 3.59
93 94 1.599542 GACAAGAGCGTAATGGCCATC 59.400 52.381 21.08 6.12 0.00 3.51
213 4093 4.416738 GACAGGAGCAGCCCACCC 62.417 72.222 3.08 0.00 37.37 4.61
215 4095 4.767255 CCGACAGGAGCAGCCCAC 62.767 72.222 3.08 0.00 41.02 4.61
221 4101 3.311110 GGACCACCGACAGGAGCA 61.311 66.667 0.00 0.00 41.02 4.26
327 4227 2.671070 CCTGGCGATCCCAAGTGT 59.329 61.111 4.71 0.00 44.81 3.55
356 4256 4.425772 TGGTTCTGGAGTTATTCCTCTCA 58.574 43.478 0.00 0.00 46.92 3.27
357 4257 5.422214 TTGGTTCTGGAGTTATTCCTCTC 57.578 43.478 0.00 0.00 46.92 3.20
362 4263 5.946377 AGTGGAATTGGTTCTGGAGTTATTC 59.054 40.000 0.00 0.00 34.68 1.75
373 4274 4.123506 GAGCTAGCTAGTGGAATTGGTTC 58.876 47.826 19.38 0.00 0.00 3.62
387 4288 3.056393 GCTGATGATGAGATGAGCTAGCT 60.056 47.826 19.45 19.45 30.60 3.32
388 4289 3.255725 GCTGATGATGAGATGAGCTAGC 58.744 50.000 6.62 6.62 30.60 3.42
389 4290 4.522722 TGCTGATGATGAGATGAGCTAG 57.477 45.455 0.00 0.00 34.04 3.42
390 4291 4.081586 GGATGCTGATGATGAGATGAGCTA 60.082 45.833 0.00 0.00 34.04 3.32
391 4292 3.307129 GGATGCTGATGATGAGATGAGCT 60.307 47.826 0.00 0.00 34.04 4.09
396 4297 2.372172 TGCTGGATGCTGATGATGAGAT 59.628 45.455 0.00 0.00 43.37 2.75
421 4330 0.179124 GCTCTCATCGTGGTGAGTCC 60.179 60.000 9.79 0.00 44.66 3.85
427 4336 1.102154 CTCTGAGCTCTCATCGTGGT 58.898 55.000 16.19 0.00 39.13 4.16
439 4348 0.809241 CATGAACGGGAGCTCTGAGC 60.809 60.000 21.72 21.72 42.84 4.26
443 4352 2.586792 GCCATGAACGGGAGCTCT 59.413 61.111 14.64 0.00 0.00 4.09
448 4357 3.626996 CTGCTGGCCATGAACGGGA 62.627 63.158 5.51 0.00 0.00 5.14
472 4415 1.448540 GACTGGACTGGACATGGCG 60.449 63.158 0.00 0.00 0.00 5.69
656 4627 0.387750 GTAGGGAAAGACGACGCGTT 60.388 55.000 15.53 0.00 41.37 4.84
665 4636 1.306397 GGACGGGGGTAGGGAAAGA 60.306 63.158 0.00 0.00 0.00 2.52
746 4717 4.467084 CGGGGGTGGGTGATGACG 62.467 72.222 0.00 0.00 0.00 4.35
942 4920 3.878519 CTCGCTCCTCCGTCCGTC 61.879 72.222 0.00 0.00 0.00 4.79
1417 5418 4.697756 CATCACCACCACCGGCGT 62.698 66.667 6.01 0.00 0.00 5.68
1942 5947 8.087750 AGTTCTTGCTCTATAATCTCTATGCAC 58.912 37.037 0.00 0.00 0.00 4.57
1947 5952 6.495181 CCCCAGTTCTTGCTCTATAATCTCTA 59.505 42.308 0.00 0.00 0.00 2.43
1959 5964 0.040204 CCATTCCCCCAGTTCTTGCT 59.960 55.000 0.00 0.00 0.00 3.91
2028 6039 1.363744 GCAACATCCTCTGTTCTCCG 58.636 55.000 0.00 0.00 44.99 4.63
2031 6042 0.035317 TGCGCAACATCCTCTGTTCT 59.965 50.000 8.16 0.00 44.99 3.01
2143 6154 0.669077 CTACTACTAGCAGGTGCCGG 59.331 60.000 0.00 0.00 43.38 6.13
2193 6204 1.203052 GAATTGTGTGGTGCCCTCATG 59.797 52.381 0.00 0.00 29.60 3.07
2308 6319 2.886523 GCCCAGATGCATTGCTTGTATA 59.113 45.455 10.49 0.00 29.94 1.47
2334 6345 3.372206 CGATTTTCTTGCGTGATCCTCTT 59.628 43.478 0.00 0.00 0.00 2.85
2391 6405 0.249405 AGGCAAATGCAACCGTGTTG 60.249 50.000 7.80 11.12 44.36 3.33
2397 6411 2.819608 TGAACTAGAGGCAAATGCAACC 59.180 45.455 7.80 0.00 44.36 3.77
2441 6455 5.048504 TCTGAAACTTTGCCATCTGATGAAC 60.049 40.000 18.92 10.81 0.00 3.18
2484 6501 2.223641 GCAATCGGTATCGGAGTGTGTA 60.224 50.000 0.00 0.00 36.95 2.90
2501 6518 1.228552 ACCGGCCTTCTTGTGCAAT 60.229 52.632 0.00 0.00 0.00 3.56
2513 6530 4.910585 CGGCATCTACCACCGGCC 62.911 72.222 0.00 0.00 43.23 6.13
2530 6547 2.814336 AAGGTTCGGCTTCAGAACATTC 59.186 45.455 10.62 0.00 45.57 2.67
2568 6585 7.623278 AGTCTCCTAAATTCCTCTTTCTCAGAT 59.377 37.037 0.00 0.00 0.00 2.90
2610 6627 1.302033 AGACAGGCCAAGCTCGTTG 60.302 57.895 5.01 0.00 35.71 4.10
2612 6629 1.548357 ATCAGACAGGCCAAGCTCGT 61.548 55.000 5.01 0.00 0.00 4.18
2646 6663 3.044986 CAAGTTTGCTGAACAACCATCG 58.955 45.455 6.36 0.00 40.84 3.84
2658 6675 1.299541 CCGACACAGTCAAGTTTGCT 58.700 50.000 0.00 0.00 32.09 3.91
2703 6720 4.083802 GCTGAGGTGTTTGTGTCATTAGTC 60.084 45.833 0.00 0.00 0.00 2.59
2736 6753 4.824848 CGATGAGTCGGAAAAGTTACTG 57.175 45.455 0.00 0.00 44.00 2.74
2789 6806 4.946157 ACTCAGGTGATTGATCATTGGAAC 59.054 41.667 0.00 0.00 39.30 3.62
2958 6975 9.204570 ACAAAGTGTTAAGTATAAGCACTACAG 57.795 33.333 0.00 0.00 34.85 2.74
3061 7078 6.494491 ACATCCAATCTCATTTTGAGGAACAA 59.506 34.615 4.78 0.00 44.39 2.83
3070 7087 4.713321 CCAGGGAACATCCAATCTCATTTT 59.287 41.667 0.00 0.00 38.64 1.82
3071 7088 4.264532 ACCAGGGAACATCCAATCTCATTT 60.265 41.667 0.00 0.00 38.64 2.32
3076 7093 2.566746 AGACCAGGGAACATCCAATCT 58.433 47.619 0.00 0.00 38.64 2.40
3286 9458 0.108424 AGCATGCTTCGAGGACTGAC 60.108 55.000 16.30 0.00 0.00 3.51
3363 9535 3.375610 AGCACAACGTTCAATGTGTTACA 59.624 39.130 16.98 0.00 46.68 2.41
3367 9541 3.462982 TCTAGCACAACGTTCAATGTGT 58.537 40.909 16.98 1.48 46.68 3.72
3371 9545 6.128282 CCTTACATTCTAGCACAACGTTCAAT 60.128 38.462 0.00 0.00 0.00 2.57
3377 9551 6.273825 AGTATCCTTACATTCTAGCACAACG 58.726 40.000 0.00 0.00 0.00 4.10
3383 9557 8.145122 AGCTACAAAGTATCCTTACATTCTAGC 58.855 37.037 0.00 0.00 0.00 3.42
3412 9710 2.157738 GCTAGAATATTGCTGGGGCTG 58.842 52.381 0.00 0.00 39.59 4.85
3414 9712 2.276732 TGCTAGAATATTGCTGGGGC 57.723 50.000 0.00 0.00 39.26 5.80
3444 9742 6.844917 ACACAGCCCTACCTAGTTTTATAGAT 59.155 38.462 0.00 0.00 0.00 1.98
3445 9743 6.097839 CACACAGCCCTACCTAGTTTTATAGA 59.902 42.308 0.00 0.00 0.00 1.98
3446 9744 6.127140 ACACACAGCCCTACCTAGTTTTATAG 60.127 42.308 0.00 0.00 0.00 1.31
3447 9745 5.722923 ACACACAGCCCTACCTAGTTTTATA 59.277 40.000 0.00 0.00 0.00 0.98
3448 9746 4.534897 ACACACAGCCCTACCTAGTTTTAT 59.465 41.667 0.00 0.00 0.00 1.40
3449 9747 3.905591 ACACACAGCCCTACCTAGTTTTA 59.094 43.478 0.00 0.00 0.00 1.52
3450 9748 2.709397 ACACACAGCCCTACCTAGTTTT 59.291 45.455 0.00 0.00 0.00 2.43
3451 9749 2.335933 ACACACAGCCCTACCTAGTTT 58.664 47.619 0.00 0.00 0.00 2.66
3452 9750 2.025636 ACACACAGCCCTACCTAGTT 57.974 50.000 0.00 0.00 0.00 2.24
3453 9751 2.913603 TACACACAGCCCTACCTAGT 57.086 50.000 0.00 0.00 0.00 2.57
3454 9752 2.628657 GGATACACACAGCCCTACCTAG 59.371 54.545 0.00 0.00 0.00 3.02
3455 9753 2.674420 GGATACACACAGCCCTACCTA 58.326 52.381 0.00 0.00 0.00 3.08
3456 9754 1.497161 GGATACACACAGCCCTACCT 58.503 55.000 0.00 0.00 0.00 3.08
3457 9755 0.104304 CGGATACACACAGCCCTACC 59.896 60.000 0.00 0.00 0.00 3.18
3458 9756 0.529992 GCGGATACACACAGCCCTAC 60.530 60.000 0.00 0.00 0.00 3.18
3459 9757 1.820581 GCGGATACACACAGCCCTA 59.179 57.895 0.00 0.00 0.00 3.53
3460 9758 2.584608 GCGGATACACACAGCCCT 59.415 61.111 0.00 0.00 0.00 5.19
3461 9759 2.890474 CGCGGATACACACAGCCC 60.890 66.667 0.00 0.00 0.00 5.19
3462 9760 2.644555 ATCCGCGGATACACACAGCC 62.645 60.000 38.39 0.00 32.36 4.85
3463 9761 1.227263 ATCCGCGGATACACACAGC 60.227 57.895 38.39 0.00 32.36 4.40
3464 9762 1.490693 GCATCCGCGGATACACACAG 61.491 60.000 38.48 24.99 32.93 3.66
3465 9763 1.520564 GCATCCGCGGATACACACA 60.521 57.895 38.48 11.28 32.93 3.72
3466 9764 1.520564 TGCATCCGCGGATACACAC 60.521 57.895 38.48 24.32 42.97 3.82
3467 9765 2.896443 TGCATCCGCGGATACACA 59.104 55.556 38.48 30.94 42.97 3.72
3474 9772 3.197790 CAACCTCTGCATCCGCGG 61.198 66.667 22.12 22.12 46.70 6.46
3475 9773 3.197790 CCAACCTCTGCATCCGCG 61.198 66.667 0.00 0.00 42.97 6.46
3476 9774 2.825836 CCCAACCTCTGCATCCGC 60.826 66.667 0.00 0.00 39.24 5.54
3477 9775 1.153289 CTCCCAACCTCTGCATCCG 60.153 63.158 0.00 0.00 0.00 4.18
3478 9776 1.225704 CCTCCCAACCTCTGCATCC 59.774 63.158 0.00 0.00 0.00 3.51
3479 9777 1.225704 CCCTCCCAACCTCTGCATC 59.774 63.158 0.00 0.00 0.00 3.91
3480 9778 1.142688 AACCCTCCCAACCTCTGCAT 61.143 55.000 0.00 0.00 0.00 3.96
3481 9779 0.474854 TAACCCTCCCAACCTCTGCA 60.475 55.000 0.00 0.00 0.00 4.41
3482 9780 0.696501 TTAACCCTCCCAACCTCTGC 59.303 55.000 0.00 0.00 0.00 4.26
3483 9781 1.004394 GGTTAACCCTCCCAACCTCTG 59.996 57.143 14.16 0.00 38.93 3.35
3484 9782 1.369403 GGTTAACCCTCCCAACCTCT 58.631 55.000 14.16 0.00 38.93 3.69
3485 9783 3.972368 GGTTAACCCTCCCAACCTC 57.028 57.895 14.16 0.00 38.93 3.85
3486 9784 3.610896 AGGTTAACCCTCCCAACCT 57.389 52.632 21.30 0.00 45.67 3.50
3487 9785 1.709115 AGAAGGTTAACCCTCCCAACC 59.291 52.381 21.30 0.00 45.47 3.77
3488 9786 3.520691 AAGAAGGTTAACCCTCCCAAC 57.479 47.619 21.30 5.30 45.47 3.77
3489 9787 4.546224 AAAAGAAGGTTAACCCTCCCAA 57.454 40.909 21.30 0.00 45.47 4.12
3490 9788 4.079096 TGAAAAAGAAGGTTAACCCTCCCA 60.079 41.667 21.30 8.08 45.47 4.37
3491 9789 4.476297 TGAAAAAGAAGGTTAACCCTCCC 58.524 43.478 21.30 7.91 45.47 4.30
3492 9790 6.474140 TTTGAAAAAGAAGGTTAACCCTCC 57.526 37.500 21.30 10.36 45.47 4.30
3493 9791 8.958119 ATTTTTGAAAAAGAAGGTTAACCCTC 57.042 30.769 21.30 17.72 45.47 4.30
3510 9808 9.487442 ACCAGGCCTTATAGATTTATTTTTGAA 57.513 29.630 0.00 0.00 0.00 2.69
3511 9809 9.487442 AACCAGGCCTTATAGATTTATTTTTGA 57.513 29.630 0.00 0.00 0.00 2.69
3512 9810 9.533253 CAACCAGGCCTTATAGATTTATTTTTG 57.467 33.333 0.00 0.00 0.00 2.44
3513 9811 9.487442 TCAACCAGGCCTTATAGATTTATTTTT 57.513 29.630 0.00 0.00 0.00 1.94
3514 9812 9.487442 TTCAACCAGGCCTTATAGATTTATTTT 57.513 29.630 0.00 0.00 0.00 1.82
3515 9813 9.487442 TTTCAACCAGGCCTTATAGATTTATTT 57.513 29.630 0.00 0.00 0.00 1.40
3516 9814 9.136323 CTTTCAACCAGGCCTTATAGATTTATT 57.864 33.333 0.00 0.00 0.00 1.40
3517 9815 7.725844 CCTTTCAACCAGGCCTTATAGATTTAT 59.274 37.037 0.00 0.00 0.00 1.40
3518 9816 7.060421 CCTTTCAACCAGGCCTTATAGATTTA 58.940 38.462 0.00 0.00 0.00 1.40
3519 9817 5.893824 CCTTTCAACCAGGCCTTATAGATTT 59.106 40.000 0.00 0.00 0.00 2.17
3520 9818 5.449553 CCTTTCAACCAGGCCTTATAGATT 58.550 41.667 0.00 0.00 0.00 2.40
3532 9830 2.958355 TCAGAAAAGGCCTTTCAACCAG 59.042 45.455 30.49 16.63 45.15 4.00
3556 9854 2.031120 TCCCAGCACAGTTTTTCCTTG 58.969 47.619 0.00 0.00 0.00 3.61
3566 9864 3.330267 GAGAGTTTAGTTCCCAGCACAG 58.670 50.000 0.00 0.00 0.00 3.66
3575 9873 8.809468 AATCAATAAAGGGGAGAGTTTAGTTC 57.191 34.615 0.00 0.00 0.00 3.01
3578 9876 9.907229 AGTAAATCAATAAAGGGGAGAGTTTAG 57.093 33.333 0.00 0.00 0.00 1.85
3609 9907 5.929058 TCTACTTCAGATCAGCAACAGAT 57.071 39.130 0.00 0.00 0.00 2.90
3634 9932 9.026074 TCATTTAAGGTTTTGTCACGATTTTTC 57.974 29.630 0.00 0.00 0.00 2.29
3636 9934 8.934507 TTCATTTAAGGTTTTGTCACGATTTT 57.065 26.923 0.00 0.00 0.00 1.82
3638 9936 9.840427 CTATTCATTTAAGGTTTTGTCACGATT 57.160 29.630 0.00 0.00 0.00 3.34
3641 9939 7.305474 AGCTATTCATTTAAGGTTTTGTCACG 58.695 34.615 0.00 0.00 0.00 4.35
3676 9982 5.008415 TGTTTTGTGGCCAAATGCATTTTAG 59.992 36.000 21.95 16.62 43.89 1.85
3699 10005 4.773510 CTCATCGTGATGAATGCAATCTG 58.226 43.478 13.15 0.00 46.10 2.90
3700 10006 3.250280 GCTCATCGTGATGAATGCAATCT 59.750 43.478 13.15 0.00 46.10 2.40
3707 10013 2.696989 TGGTGCTCATCGTGATGAAT 57.303 45.000 13.15 0.00 46.10 2.57
3779 10124 9.900710 GAGTATATCATAACAGAACGATGTCTT 57.099 33.333 0.00 0.00 31.50 3.01
3780 10125 9.290988 AGAGTATATCATAACAGAACGATGTCT 57.709 33.333 0.00 0.00 31.50 3.41
3781 10126 9.900710 AAGAGTATATCATAACAGAACGATGTC 57.099 33.333 0.00 0.00 31.50 3.06
3807 10154 6.412362 ACTGTTTCAAGCTTCTCTCTAGAA 57.588 37.500 0.00 0.00 39.47 2.10
3808 10155 6.183360 ACAACTGTTTCAAGCTTCTCTCTAGA 60.183 38.462 0.00 0.00 0.00 2.43
3809 10156 5.988561 ACAACTGTTTCAAGCTTCTCTCTAG 59.011 40.000 0.00 0.00 0.00 2.43
3823 10204 6.863126 CCCATTCTGTAAATCACAACTGTTTC 59.137 38.462 0.00 0.00 36.48 2.78
3829 10210 5.242838 TCCAACCCATTCTGTAAATCACAAC 59.757 40.000 0.00 0.00 36.48 3.32
3832 10213 6.332630 CAATCCAACCCATTCTGTAAATCAC 58.667 40.000 0.00 0.00 0.00 3.06
3848 10229 2.231235 CCAAAGCCTACACCAATCCAAC 59.769 50.000 0.00 0.00 0.00 3.77
3852 10233 0.451783 CGCCAAAGCCTACACCAATC 59.548 55.000 0.00 0.00 34.57 2.67
3856 10237 1.599797 ACACGCCAAAGCCTACACC 60.600 57.895 0.00 0.00 34.57 4.16
3857 10238 1.164041 ACACACGCCAAAGCCTACAC 61.164 55.000 0.00 0.00 34.57 2.90
3858 10239 0.393448 TACACACGCCAAAGCCTACA 59.607 50.000 0.00 0.00 34.57 2.74
3864 10245 2.151202 ACTCCATTACACACGCCAAAG 58.849 47.619 0.00 0.00 0.00 2.77
3869 10250 6.213677 TCATAATCTACTCCATTACACACGC 58.786 40.000 0.00 0.00 0.00 5.34
3888 10269 8.647796 AGGAGAAACCATACGTTATCATCATAA 58.352 33.333 0.00 0.00 42.04 1.90
3900 10283 2.761208 AGACAGGAGGAGAAACCATACG 59.239 50.000 0.00 0.00 42.04 3.06
3912 10295 1.748493 GTACTCTCTGCAGACAGGAGG 59.252 57.143 26.38 12.71 44.59 4.30
3915 10298 2.441410 TCTGTACTCTCTGCAGACAGG 58.559 52.381 24.37 12.55 44.59 4.00
3916 10299 4.717233 ATTCTGTACTCTCTGCAGACAG 57.283 45.455 20.86 20.86 40.96 3.51
3979 11531 5.362143 CCAGATCCTCAATGTCAGACTCTAA 59.638 44.000 1.31 0.00 0.00 2.10
3995 11547 0.549950 CATGGACAAGGCCAGATCCT 59.450 55.000 17.33 3.89 42.15 3.24
3996 11548 0.466922 CCATGGACAAGGCCAGATCC 60.467 60.000 5.56 9.03 42.15 3.36
4000 11552 4.326255 GTCCATGGACAAGGCCAG 57.674 61.111 35.21 0.00 44.02 4.85
4014 11566 0.861837 CAGCAGTCTTCGTTGTGTCC 59.138 55.000 0.00 0.00 0.00 4.02
4031 11583 2.407428 CCACCATGAGCAGCAGCAG 61.407 63.158 3.17 0.00 45.49 4.24
4034 11586 3.506096 CGCCACCATGAGCAGCAG 61.506 66.667 0.00 0.00 0.00 4.24
4054 11606 2.186826 ATGGTATTTCGGCGCTGCC 61.187 57.895 12.58 7.15 46.75 4.85
4058 11610 0.450184 AACACATGGTATTTCGGCGC 59.550 50.000 0.00 0.00 0.00 6.53
4059 11611 1.735018 TGAACACATGGTATTTCGGCG 59.265 47.619 0.00 0.00 0.00 6.46
4062 11614 5.046910 AGCTTTGAACACATGGTATTTCG 57.953 39.130 0.00 0.00 0.00 3.46
4092 11644 5.047802 GCCTTCCAAGAACTCAAAATCATGA 60.048 40.000 0.00 0.00 0.00 3.07
4108 11660 2.416107 CTGTGGAGCCTGCCTTCCAA 62.416 60.000 2.05 0.00 33.64 3.53
4110 11662 2.045536 CTGTGGAGCCTGCCTTCC 60.046 66.667 0.00 0.00 0.00 3.46
4149 11701 2.099431 GTCCAGAAGCAGCTCAGCG 61.099 63.158 0.00 0.00 40.15 5.18
4179 11731 1.078072 ACTTGACGGTGTGCCACAA 60.078 52.632 0.00 0.00 35.86 3.33
4203 11755 3.694566 TCTCGACGATGAAAGAATGGAGA 59.305 43.478 0.00 0.00 0.00 3.71
4244 11796 3.411418 GATCCGCCGCAGAAGACGA 62.411 63.158 0.00 0.00 0.00 4.20
4257 11809 3.391665 AAAGCTGCTCCCCGATCCG 62.392 63.158 1.00 0.00 0.00 4.18
4265 11817 1.000171 CCTTCAAACCAAAGCTGCTCC 60.000 52.381 1.00 0.00 0.00 4.70
4275 11827 3.202151 ACTTGTTCTCCTCCTTCAAACCA 59.798 43.478 0.00 0.00 0.00 3.67
4278 11830 4.410883 TGGTACTTGTTCTCCTCCTTCAAA 59.589 41.667 0.00 0.00 0.00 2.69
4281 11833 4.316645 GTTGGTACTTGTTCTCCTCCTTC 58.683 47.826 0.00 0.00 0.00 3.46
4287 11839 3.243839 TGGTACGTTGGTACTTGTTCTCC 60.244 47.826 0.00 0.00 46.62 3.71
4296 11848 4.122046 ACAAGAAGTTGGTACGTTGGTAC 58.878 43.478 0.00 0.00 46.69 3.34
4298 11850 3.271055 ACAAGAAGTTGGTACGTTGGT 57.729 42.857 0.00 0.00 38.07 3.67
4315 11867 1.731709 CTCGACGATGCAATCCAACAA 59.268 47.619 0.00 0.00 41.39 2.83
4320 11872 1.812214 GCGACTCGACGATGCAATCC 61.812 60.000 1.63 0.00 41.39 3.01
4323 11875 1.801512 CAGCGACTCGACGATGCAA 60.802 57.895 16.05 0.00 42.22 4.08
4354 11906 2.387445 CGCATTTCCCGAAGTCGCA 61.387 57.895 0.00 0.00 38.18 5.10
4417 11969 2.029470 CGGATATCTCCCTCTTCAGCAC 60.029 54.545 2.05 0.00 38.45 4.40
4458 12010 1.509463 CCGGTCCGACGAAATCTCA 59.491 57.895 14.39 0.00 35.47 3.27
4552 12104 0.465705 ATGTCGTCCTCAATGGCGAT 59.534 50.000 0.00 0.00 42.73 4.58
4680 12235 6.366340 TCTTCGGAGGAGAAATAGAGTACAT 58.634 40.000 0.00 0.00 0.00 2.29
4681 12236 5.752650 TCTTCGGAGGAGAAATAGAGTACA 58.247 41.667 0.00 0.00 0.00 2.90
4774 12333 1.202651 AGCACGTTTCAGTTAGCCAGT 60.203 47.619 0.00 0.00 0.00 4.00
4775 12334 1.512926 AGCACGTTTCAGTTAGCCAG 58.487 50.000 0.00 0.00 0.00 4.85
4776 12335 2.823924 TAGCACGTTTCAGTTAGCCA 57.176 45.000 0.00 0.00 0.00 4.75
4841 12402 4.081406 TGGCATTATTCAGTGAAACAGCT 58.919 39.130 10.14 0.00 41.43 4.24
4870 12431 2.785562 ACCGTACCATAAAAGCTTGCA 58.214 42.857 0.00 0.00 0.00 4.08
4897 12458 4.736126 TGCTGAAGAGGAAATACGATGA 57.264 40.909 0.00 0.00 0.00 2.92
4927 12488 0.317160 CAACGTACACAGGAGCTCCA 59.683 55.000 33.90 10.85 38.89 3.86
4942 12503 1.782044 CAAAATGGCCTTGGACAACG 58.218 50.000 3.32 0.00 0.00 4.10
4964 12525 4.574892 TCTTCCATCATCGCTACACAAAA 58.425 39.130 0.00 0.00 0.00 2.44
5000 12561 9.191995 TCCGAAAAGAAAAGAAAATCTTAATGC 57.808 29.630 0.00 0.00 35.27 3.56
5004 12565 9.744468 CCTTTCCGAAAAGAAAAGAAAATCTTA 57.256 29.630 0.00 0.00 43.90 2.10
5005 12566 8.474831 TCCTTTCCGAAAAGAAAAGAAAATCTT 58.525 29.630 0.00 0.00 43.90 2.40
5006 12567 8.007405 TCCTTTCCGAAAAGAAAAGAAAATCT 57.993 30.769 0.00 0.00 43.90 2.40
5007 12568 7.382488 CCTCCTTTCCGAAAAGAAAAGAAAATC 59.618 37.037 0.00 0.00 43.90 2.17
5008 12569 7.147724 ACCTCCTTTCCGAAAAGAAAAGAAAAT 60.148 33.333 0.00 0.00 43.90 1.82
5009 12570 6.153851 ACCTCCTTTCCGAAAAGAAAAGAAAA 59.846 34.615 0.00 0.00 43.90 2.29
5010 12571 5.655090 ACCTCCTTTCCGAAAAGAAAAGAAA 59.345 36.000 0.00 0.00 43.90 2.52
5011 12572 5.198207 ACCTCCTTTCCGAAAAGAAAAGAA 58.802 37.500 0.00 0.00 43.90 2.52
5012 12573 4.788679 ACCTCCTTTCCGAAAAGAAAAGA 58.211 39.130 0.00 0.00 43.90 2.52
5023 12584 3.564262 GGGGTTAACCTCCTTTCCG 57.436 57.895 23.69 0.00 40.03 4.30
5068 12629 8.938801 TCATGGCAAAAGGTACATATCAATAT 57.061 30.769 0.00 0.00 0.00 1.28
5069 12630 8.938801 ATCATGGCAAAAGGTACATATCAATA 57.061 30.769 0.00 0.00 0.00 1.90
5070 12631 7.844493 ATCATGGCAAAAGGTACATATCAAT 57.156 32.000 0.00 0.00 0.00 2.57
5071 12632 8.938801 ATATCATGGCAAAAGGTACATATCAA 57.061 30.769 0.00 0.00 0.00 2.57
5072 12633 7.611467 GGATATCATGGCAAAAGGTACATATCA 59.389 37.037 4.83 0.00 0.00 2.15
5089 12650 6.452242 CATGGACACCAAATTGGATATCATG 58.548 40.000 20.25 19.52 40.96 3.07
5114 12676 1.137675 TGTTCATCGGGCTCATCTGAG 59.862 52.381 2.75 2.75 44.75 3.35
5126 12688 7.541743 TTTTTAATTGCGTTACTGTTCATCG 57.458 32.000 0.00 0.00 0.00 3.84
5161 12723 3.316588 TCCTGCTTGCAAAACAAATACGA 59.683 39.130 0.00 0.00 37.96 3.43
5169 12731 1.142474 GCACATCCTGCTTGCAAAAC 58.858 50.000 0.00 0.00 43.33 2.43
5195 12757 4.448395 CACCAAATTTTGCACGAACATCAT 59.552 37.500 3.50 0.00 0.00 2.45
5203 12765 1.833860 ACGTCACCAAATTTTGCACG 58.166 45.000 17.70 17.70 34.71 5.34
5256 12818 4.771590 TTCACTGTTCATGCCTGAATTC 57.228 40.909 7.71 0.00 43.08 2.17
5278 12840 4.463891 AGAGAAACATTTGAAATGCGGGAT 59.536 37.500 17.19 0.91 0.00 3.85
5280 12842 4.168760 GAGAGAAACATTTGAAATGCGGG 58.831 43.478 17.19 0.00 0.00 6.13
5281 12843 4.797471 TGAGAGAAACATTTGAAATGCGG 58.203 39.130 17.19 0.00 0.00 5.69
5282 12844 6.752335 TTTGAGAGAAACATTTGAAATGCG 57.248 33.333 17.19 0.00 0.00 4.73
5284 12846 7.809331 TCGGATTTGAGAGAAACATTTGAAATG 59.191 33.333 15.82 15.82 0.00 2.32
5285 12847 7.885297 TCGGATTTGAGAGAAACATTTGAAAT 58.115 30.769 0.00 0.00 0.00 2.17
5294 12856 5.532025 ACGAATTCGGATTTGAGAGAAAC 57.468 39.130 29.79 0.00 44.95 2.78
5322 12884 0.035317 ATTCAGGCAGCTCGTGACAA 59.965 50.000 7.69 0.00 39.08 3.18
5334 12896 8.947055 ATTTGGTTATATTTGAACATTCAGGC 57.053 30.769 0.00 0.00 38.61 4.85
5368 12930 5.679734 AAGATGTTTGAGTGTGTGATGTC 57.320 39.130 0.00 0.00 0.00 3.06
5375 12937 4.898829 TGGTGAAAGATGTTTGAGTGTG 57.101 40.909 0.00 0.00 0.00 3.82
5430 12992 8.382875 GTGAATAGTAACGCCGTTTAAAATACT 58.617 33.333 8.19 6.94 0.00 2.12
5431 12993 8.382875 AGTGAATAGTAACGCCGTTTAAAATAC 58.617 33.333 8.19 0.00 0.00 1.89
5432 12994 8.477984 AGTGAATAGTAACGCCGTTTAAAATA 57.522 30.769 8.19 0.00 0.00 1.40
5434 12996 6.128580 GGAGTGAATAGTAACGCCGTTTAAAA 60.129 38.462 8.19 0.00 0.00 1.52
5435 12997 5.348451 GGAGTGAATAGTAACGCCGTTTAAA 59.652 40.000 8.19 0.00 0.00 1.52
5436 12998 4.864247 GGAGTGAATAGTAACGCCGTTTAA 59.136 41.667 8.19 0.00 0.00 1.52
5437 12999 4.423732 GGAGTGAATAGTAACGCCGTTTA 58.576 43.478 8.19 0.00 0.00 2.01
5438 13000 3.256558 GGAGTGAATAGTAACGCCGTTT 58.743 45.455 8.19 0.00 0.00 3.60
5439 13001 2.884827 GGAGTGAATAGTAACGCCGTT 58.115 47.619 7.93 7.93 0.00 4.44
5440 13002 2.573941 GGAGTGAATAGTAACGCCGT 57.426 50.000 0.00 0.00 0.00 5.68
5442 13004 1.537562 CCCGGAGTGAATAGTAACGCC 60.538 57.143 0.73 0.00 33.37 5.68
5443 13005 1.537562 CCCCGGAGTGAATAGTAACGC 60.538 57.143 0.73 0.00 0.00 4.84
5444 13006 1.537562 GCCCCGGAGTGAATAGTAACG 60.538 57.143 0.73 0.00 0.00 3.18
5445 13007 1.761198 AGCCCCGGAGTGAATAGTAAC 59.239 52.381 0.73 0.00 0.00 2.50
5446 13008 2.037144 GAGCCCCGGAGTGAATAGTAA 58.963 52.381 0.73 0.00 0.00 2.24
5447 13009 1.063492 TGAGCCCCGGAGTGAATAGTA 60.063 52.381 0.73 0.00 0.00 1.82
5448 13010 0.325296 TGAGCCCCGGAGTGAATAGT 60.325 55.000 0.73 0.00 0.00 2.12
5449 13011 1.051812 ATGAGCCCCGGAGTGAATAG 58.948 55.000 0.73 0.00 0.00 1.73
5450 13012 2.391926 TATGAGCCCCGGAGTGAATA 57.608 50.000 0.73 0.00 0.00 1.75
5451 13013 1.349026 CATATGAGCCCCGGAGTGAAT 59.651 52.381 0.73 0.00 0.00 2.57
5452 13014 0.758734 CATATGAGCCCCGGAGTGAA 59.241 55.000 0.73 0.00 0.00 3.18
5453 13015 0.105709 TCATATGAGCCCCGGAGTGA 60.106 55.000 0.73 0.00 0.00 3.41
5454 13016 0.319728 CTCATATGAGCCCCGGAGTG 59.680 60.000 19.47 0.00 35.13 3.51
5455 13017 2.751991 CTCATATGAGCCCCGGAGT 58.248 57.895 19.47 0.00 35.13 3.85
5464 13026 1.674057 GGTCCCGGGCTCATATGAG 59.326 63.158 25.64 25.64 44.75 2.90
5465 13027 1.841556 GGGTCCCGGGCTCATATGA 60.842 63.158 18.49 5.07 0.00 2.15
5466 13028 1.705002 TTGGGTCCCGGGCTCATATG 61.705 60.000 18.49 0.00 0.00 1.78
5467 13029 0.991355 TTTGGGTCCCGGGCTCATAT 60.991 55.000 18.49 0.00 0.00 1.78
5468 13030 1.208844 TTTTGGGTCCCGGGCTCATA 61.209 55.000 18.49 9.79 0.00 2.15
5469 13031 2.543797 TTTTGGGTCCCGGGCTCAT 61.544 57.895 18.49 0.00 0.00 2.90
5470 13032 3.179339 TTTTGGGTCCCGGGCTCA 61.179 61.111 18.49 15.15 0.00 4.26
5471 13033 2.675423 GTTTTGGGTCCCGGGCTC 60.675 66.667 18.49 12.22 0.00 4.70
5472 13034 4.653888 CGTTTTGGGTCCCGGGCT 62.654 66.667 18.49 0.00 0.00 5.19
5478 13040 3.263503 GAAGCGGCGTTTTGGGTCC 62.264 63.158 11.00 0.00 0.00 4.46
5479 13041 2.254350 GAAGCGGCGTTTTGGGTC 59.746 61.111 11.00 0.00 0.00 4.46
5480 13042 3.292159 GGAAGCGGCGTTTTGGGT 61.292 61.111 11.00 0.00 0.00 4.51
5481 13043 4.050934 GGGAAGCGGCGTTTTGGG 62.051 66.667 11.00 0.00 0.00 4.12
5482 13044 2.082629 AAAGGGAAGCGGCGTTTTGG 62.083 55.000 11.00 0.00 0.00 3.28
5483 13045 0.249280 AAAAGGGAAGCGGCGTTTTG 60.249 50.000 11.00 0.00 0.00 2.44
5484 13046 0.462375 AAAAAGGGAAGCGGCGTTTT 59.538 45.000 11.00 4.33 0.00 2.43
5485 13047 0.249280 CAAAAAGGGAAGCGGCGTTT 60.249 50.000 9.21 9.21 0.00 3.60
5486 13048 1.362355 CAAAAAGGGAAGCGGCGTT 59.638 52.632 9.37 0.00 0.00 4.84
5487 13049 3.039134 CAAAAAGGGAAGCGGCGT 58.961 55.556 9.37 0.00 0.00 5.68
5488 13050 2.430751 GCAAAAAGGGAAGCGGCG 60.431 61.111 0.51 0.51 0.00 6.46
5489 13051 1.373371 CAGCAAAAAGGGAAGCGGC 60.373 57.895 0.00 0.00 0.00 6.53
5490 13052 1.178534 TCCAGCAAAAAGGGAAGCGG 61.179 55.000 0.00 0.00 0.00 5.52
5491 13053 0.890683 ATCCAGCAAAAAGGGAAGCG 59.109 50.000 0.00 0.00 33.73 4.68
5492 13054 2.094338 CAGATCCAGCAAAAAGGGAAGC 60.094 50.000 0.00 0.00 33.73 3.86
5493 13055 3.160269 ACAGATCCAGCAAAAAGGGAAG 58.840 45.455 0.00 0.00 33.73 3.46
5494 13056 3.243359 ACAGATCCAGCAAAAAGGGAA 57.757 42.857 0.00 0.00 33.73 3.97
5495 13057 2.978156 ACAGATCCAGCAAAAAGGGA 57.022 45.000 0.00 0.00 34.70 4.20
5496 13058 4.060205 CAAAACAGATCCAGCAAAAAGGG 58.940 43.478 0.00 0.00 0.00 3.95
5497 13059 3.495753 GCAAAACAGATCCAGCAAAAAGG 59.504 43.478 0.00 0.00 0.00 3.11
5498 13060 3.182972 CGCAAAACAGATCCAGCAAAAAG 59.817 43.478 0.00 0.00 0.00 2.27
5499 13061 3.122297 CGCAAAACAGATCCAGCAAAAA 58.878 40.909 0.00 0.00 0.00 1.94
5500 13062 2.545532 CCGCAAAACAGATCCAGCAAAA 60.546 45.455 0.00 0.00 0.00 2.44
5501 13063 1.000385 CCGCAAAACAGATCCAGCAAA 60.000 47.619 0.00 0.00 0.00 3.68
5502 13064 0.597568 CCGCAAAACAGATCCAGCAA 59.402 50.000 0.00 0.00 0.00 3.91
5503 13065 0.250684 TCCGCAAAACAGATCCAGCA 60.251 50.000 0.00 0.00 0.00 4.41
5504 13066 0.881118 TTCCGCAAAACAGATCCAGC 59.119 50.000 0.00 0.00 0.00 4.85
5505 13067 2.154462 AGTTCCGCAAAACAGATCCAG 58.846 47.619 1.53 0.00 0.00 3.86
5506 13068 2.270352 AGTTCCGCAAAACAGATCCA 57.730 45.000 1.53 0.00 0.00 3.41
5507 13069 2.922335 GCAAGTTCCGCAAAACAGATCC 60.922 50.000 1.53 0.00 0.00 3.36
5508 13070 2.287547 TGCAAGTTCCGCAAAACAGATC 60.288 45.455 0.00 0.00 36.17 2.75
5509 13071 1.680735 TGCAAGTTCCGCAAAACAGAT 59.319 42.857 0.00 0.00 36.17 2.90
5510 13072 1.098869 TGCAAGTTCCGCAAAACAGA 58.901 45.000 0.00 0.00 36.17 3.41
5511 13073 1.919918 TTGCAAGTTCCGCAAAACAG 58.080 45.000 0.00 0.00 45.91 3.16
5517 13079 0.465460 AGAGGTTTGCAAGTTCCGCA 60.465 50.000 17.60 0.00 37.68 5.69
5518 13080 0.238553 GAGAGGTTTGCAAGTTCCGC 59.761 55.000 0.00 6.17 0.00 5.54
5519 13081 1.593196 TGAGAGGTTTGCAAGTTCCG 58.407 50.000 0.00 0.00 0.00 4.30
5520 13082 2.287849 GCTTGAGAGGTTTGCAAGTTCC 60.288 50.000 0.00 4.31 40.73 3.62
5521 13083 2.603173 CGCTTGAGAGGTTTGCAAGTTC 60.603 50.000 0.00 0.00 40.73 3.01
5522 13084 1.334869 CGCTTGAGAGGTTTGCAAGTT 59.665 47.619 0.00 0.00 40.73 2.66
5523 13085 0.947244 CGCTTGAGAGGTTTGCAAGT 59.053 50.000 0.00 0.00 40.73 3.16
5524 13086 0.386478 GCGCTTGAGAGGTTTGCAAG 60.386 55.000 0.00 0.00 41.36 4.01
5525 13087 0.819259 AGCGCTTGAGAGGTTTGCAA 60.819 50.000 2.64 0.00 0.00 4.08
5526 13088 0.819259 AAGCGCTTGAGAGGTTTGCA 60.819 50.000 24.40 0.00 31.82 4.08
5527 13089 0.312102 AAAGCGCTTGAGAGGTTTGC 59.688 50.000 25.80 0.00 42.28 3.68
5528 13090 3.555518 GTTAAAGCGCTTGAGAGGTTTG 58.444 45.455 25.80 0.00 43.33 2.93
5529 13091 2.552743 GGTTAAAGCGCTTGAGAGGTTT 59.447 45.455 25.80 7.76 44.95 3.27
5530 13092 2.152016 GGTTAAAGCGCTTGAGAGGTT 58.848 47.619 25.80 8.59 37.15 3.50
5531 13093 1.348036 AGGTTAAAGCGCTTGAGAGGT 59.652 47.619 25.80 9.41 0.00 3.85
5532 13094 2.100605 AGGTTAAAGCGCTTGAGAGG 57.899 50.000 25.80 0.00 0.00 3.69
5533 13095 2.413371 GCAAGGTTAAAGCGCTTGAGAG 60.413 50.000 25.80 11.18 0.00 3.20
5534 13096 1.535462 GCAAGGTTAAAGCGCTTGAGA 59.465 47.619 25.80 9.62 0.00 3.27
5535 13097 1.401539 GGCAAGGTTAAAGCGCTTGAG 60.402 52.381 25.80 4.74 0.00 3.02
5536 13098 0.596082 GGCAAGGTTAAAGCGCTTGA 59.404 50.000 25.80 14.72 0.00 3.02
5537 13099 0.729140 CGGCAAGGTTAAAGCGCTTG 60.729 55.000 25.80 11.33 0.00 4.01
5538 13100 1.579429 CGGCAAGGTTAAAGCGCTT 59.421 52.632 18.98 18.98 0.00 4.68
5539 13101 2.332654 CCGGCAAGGTTAAAGCGCT 61.333 57.895 2.64 2.64 34.51 5.92
5540 13102 2.178273 CCGGCAAGGTTAAAGCGC 59.822 61.111 0.00 0.00 34.51 5.92
5541 13103 1.933115 ATGCCGGCAAGGTTAAAGCG 61.933 55.000 36.33 0.00 43.70 4.68
5542 13104 0.179137 GATGCCGGCAAGGTTAAAGC 60.179 55.000 36.33 5.79 43.70 3.51
5543 13105 1.173043 TGATGCCGGCAAGGTTAAAG 58.827 50.000 36.33 0.00 43.70 1.85
5546 13108 1.312371 GCTTGATGCCGGCAAGGTTA 61.312 55.000 36.33 11.68 42.23 2.85
5563 13125 2.742372 GCACGGATCACAACGGCT 60.742 61.111 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.