Multiple sequence alignment - TraesCS3A01G035700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G035700 chr3A 100.000 3457 0 0 1 3457 19781882 19778426 0.000000e+00 6384.0
1 TraesCS3A01G035700 chr3A 91.912 136 9 1 2780 2915 18720281 18720148 4.550000e-44 189.0
2 TraesCS3A01G035700 chr3A 91.176 136 10 1 2780 2915 670995530 670995397 2.120000e-42 183.0
3 TraesCS3A01G035700 chr3A 90.511 137 10 2 2780 2915 190073409 190073275 9.860000e-41 178.0
4 TraesCS3A01G035700 chr3D 92.045 1056 51 18 1627 2674 17111055 17112085 0.000000e+00 1454.0
5 TraesCS3A01G035700 chr3D 90.303 990 46 18 669 1628 17110057 17111026 0.000000e+00 1251.0
6 TraesCS3A01G035700 chr3D 82.749 342 25 15 2899 3215 17112240 17112572 1.220000e-69 274.0
7 TraesCS3A01G035700 chr3D 78.431 255 34 17 2472 2709 17343465 17343715 2.780000e-31 147.0
8 TraesCS3A01G035700 chr3D 75.725 276 39 13 3041 3315 520360083 520360331 2.820000e-21 113.0
9 TraesCS3A01G035700 chr3D 97.778 45 1 0 3303 3347 17112572 17112616 1.030000e-10 78.7
10 TraesCS3A01G035700 chr3B 91.327 957 60 11 1627 2561 24514810 24515765 0.000000e+00 1286.0
11 TraesCS3A01G035700 chr3B 92.474 784 33 9 863 1627 24514004 24514780 0.000000e+00 1098.0
12 TraesCS3A01G035700 chr3B 89.831 354 23 6 2780 3123 786833536 786833186 3.170000e-120 442.0
13 TraesCS3A01G035700 chr3B 83.158 285 23 11 3176 3457 605648676 605648414 1.600000e-58 237.0
14 TraesCS3A01G035700 chr2A 93.304 672 44 1 1 671 17120302 17119631 0.000000e+00 990.0
15 TraesCS3A01G035700 chr2A 91.912 136 9 2 2780 2915 108550322 108550189 4.550000e-44 189.0
16 TraesCS3A01G035700 chr1A 91.541 532 39 5 149 675 412783943 412784473 0.000000e+00 728.0
17 TraesCS3A01G035700 chr1A 81.206 282 19 12 3176 3454 109427431 109427181 2.720000e-46 196.0
18 TraesCS3A01G035700 chr6B 90.994 533 42 5 149 676 412164281 412163750 0.000000e+00 713.0
19 TraesCS3A01G035700 chr6B 90.772 531 42 6 149 673 106476540 106477069 0.000000e+00 702.0
20 TraesCS3A01G035700 chr6B 100.000 86 0 0 3212 3297 96106504 96106589 3.570000e-35 159.0
21 TraesCS3A01G035700 chr6B 94.949 99 5 0 2495 2593 674318384 674318482 4.620000e-34 156.0
22 TraesCS3A01G035700 chr6B 98.837 86 1 0 3212 3297 219823563 219823478 1.660000e-33 154.0
23 TraesCS3A01G035700 chr7B 90.548 529 43 6 149 671 320268801 320268274 0.000000e+00 693.0
24 TraesCS3A01G035700 chr7B 87.302 378 47 1 2019 2395 37374364 37373987 6.850000e-117 431.0
25 TraesCS3A01G035700 chr7B 93.382 136 7 1 2780 2915 677490734 677490867 2.100000e-47 200.0
26 TraesCS3A01G035700 chr7B 100.000 86 0 0 3212 3297 16088798 16088713 3.570000e-35 159.0
27 TraesCS3A01G035700 chr7B 98.837 86 1 0 3212 3297 170653753 170653668 1.660000e-33 154.0
28 TraesCS3A01G035700 chr7B 93.939 99 6 0 2495 2593 37373286 37373188 2.150000e-32 150.0
29 TraesCS3A01G035700 chrUn 89.873 395 38 2 2002 2395 75655503 75655896 1.110000e-139 507.0
30 TraesCS3A01G035700 chrUn 89.873 395 38 2 2002 2395 186655103 186654710 1.110000e-139 507.0
31 TraesCS3A01G035700 chrUn 89.873 395 38 2 2002 2395 378943657 378943264 1.110000e-139 507.0
32 TraesCS3A01G035700 chrUn 88.861 395 42 2 2002 2395 75682360 75682753 5.190000e-133 484.0
33 TraesCS3A01G035700 chrUn 94.949 99 5 0 2495 2593 75656581 75656679 4.620000e-34 156.0
34 TraesCS3A01G035700 chrUn 94.949 99 5 0 2495 2593 75683440 75683538 4.620000e-34 156.0
35 TraesCS3A01G035700 chrUn 97.674 86 2 0 3212 3297 121446109 121446024 7.730000e-32 148.0
36 TraesCS3A01G035700 chr2B 89.367 395 41 1 2002 2395 118305400 118305794 2.400000e-136 496.0
37 TraesCS3A01G035700 chr2B 90.113 354 22 7 2780 3123 50687748 50688098 6.810000e-122 448.0
38 TraesCS3A01G035700 chr2B 85.016 307 38 8 26 330 697557243 697556943 4.330000e-79 305.0
39 TraesCS3A01G035700 chr2B 82.807 285 24 11 3176 3457 612669790 612670052 7.460000e-57 231.0
40 TraesCS3A01G035700 chr2B 94.949 99 5 0 2495 2593 118306497 118306595 4.620000e-34 156.0
41 TraesCS3A01G035700 chr2B 92.929 99 7 0 2495 2593 106369731 106369633 1.000000e-30 145.0
42 TraesCS3A01G035700 chr2B 79.487 156 16 4 465 620 63045645 63045506 2.840000e-16 97.1
43 TraesCS3A01G035700 chr7D 85.559 367 45 7 1 364 634562579 634562940 9.060000e-101 377.0
44 TraesCS3A01G035700 chr5B 84.091 308 42 6 26 330 360404316 360404013 1.210000e-74 291.0
45 TraesCS3A01G035700 chr5B 94.118 136 6 1 2780 2915 343343097 343342964 4.520000e-49 206.0
46 TraesCS3A01G035700 chr4A 84.588 279 17 11 3176 3451 76383063 76382808 1.590000e-63 254.0
47 TraesCS3A01G035700 chr4A 83.509 285 22 11 3176 3457 702432267 702432005 3.450000e-60 243.0
48 TraesCS3A01G035700 chr7A 83.588 262 39 4 104 364 731694697 731694439 3.450000e-60 243.0
49 TraesCS3A01G035700 chr4B 82.746 284 24 11 3176 3457 423395050 423394790 2.680000e-56 230.0
50 TraesCS3A01G035700 chr6A 91.176 136 10 1 2780 2915 192012654 192012787 2.120000e-42 183.0
51 TraesCS3A01G035700 chr6D 94.872 39 2 0 3041 3079 452944565 452944603 1.040000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G035700 chr3A 19778426 19781882 3456 True 6384.000 6384 100.00000 1 3457 1 chr3A.!!$R2 3456
1 TraesCS3A01G035700 chr3D 17110057 17112616 2559 False 764.425 1454 90.71875 669 3347 4 chr3D.!!$F3 2678
2 TraesCS3A01G035700 chr3B 24514004 24515765 1761 False 1192.000 1286 91.90050 863 2561 2 chr3B.!!$F1 1698
3 TraesCS3A01G035700 chr2A 17119631 17120302 671 True 990.000 990 93.30400 1 671 1 chr2A.!!$R1 670
4 TraesCS3A01G035700 chr1A 412783943 412784473 530 False 728.000 728 91.54100 149 675 1 chr1A.!!$F1 526
5 TraesCS3A01G035700 chr6B 412163750 412164281 531 True 713.000 713 90.99400 149 676 1 chr6B.!!$R2 527
6 TraesCS3A01G035700 chr6B 106476540 106477069 529 False 702.000 702 90.77200 149 673 1 chr6B.!!$F2 524
7 TraesCS3A01G035700 chr7B 320268274 320268801 527 True 693.000 693 90.54800 149 671 1 chr7B.!!$R3 522
8 TraesCS3A01G035700 chr7B 37373188 37374364 1176 True 290.500 431 90.62050 2019 2593 2 chr7B.!!$R4 574
9 TraesCS3A01G035700 chrUn 75655503 75656679 1176 False 331.500 507 92.41100 2002 2593 2 chrUn.!!$F1 591
10 TraesCS3A01G035700 chrUn 75682360 75683538 1178 False 320.000 484 91.90500 2002 2593 2 chrUn.!!$F2 591
11 TraesCS3A01G035700 chr2B 118305400 118306595 1195 False 326.000 496 92.15800 2002 2593 2 chr2B.!!$F3 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
121 122 0.033504 GGGAGTTGTGCTCTTCGACA 59.966 55.0 0.0 0.0 43.62 4.35 F
453 460 0.247736 CGACAAGGGGAGAGGAAGTG 59.752 60.0 0.0 0.0 0.00 3.16 F
1829 1918 0.179045 CAGGAAGCAATACTCCCCGG 60.179 60.0 0.0 0.0 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1461 1520 1.000145 GGAACTCTGACGAATTCGCC 59.000 55.000 27.03 17.7 44.43 5.54 R
2318 2410 1.008424 CGCTGCTATGACCGACGAT 60.008 57.895 0.00 0.0 0.00 3.73 R
2843 3555 0.034476 TGCAGTGCCTGTCTGAAGAG 59.966 55.000 13.72 0.0 35.20 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 0.529773 TGTCGCACGAAGCTTCAACT 60.530 50.000 25.47 4.92 42.61 3.16
106 107 2.043652 CAACAGGGGCCATGGGAG 60.044 66.667 23.64 7.76 0.00 4.30
107 108 2.535317 AACAGGGGCCATGGGAGT 60.535 61.111 23.64 0.00 0.00 3.85
109 110 2.043652 CAGGGGCCATGGGAGTTG 60.044 66.667 15.13 0.00 0.00 3.16
121 122 0.033504 GGGAGTTGTGCTCTTCGACA 59.966 55.000 0.00 0.00 43.62 4.35
136 137 3.300667 GACAGCGAGGTTGCAAGCG 62.301 63.158 21.95 15.92 37.31 4.68
449 456 1.248785 CGAACGACAAGGGGAGAGGA 61.249 60.000 0.00 0.00 0.00 3.71
450 457 0.974383 GAACGACAAGGGGAGAGGAA 59.026 55.000 0.00 0.00 0.00 3.36
453 460 0.247736 CGACAAGGGGAGAGGAAGTG 59.752 60.000 0.00 0.00 0.00 3.16
456 463 0.547712 CAAGGGGAGAGGAAGTGGGA 60.548 60.000 0.00 0.00 0.00 4.37
579 587 9.442047 GAAGATGAAGTCAAAGAAGGATAAGAA 57.558 33.333 0.00 0.00 0.00 2.52
677 687 1.938016 GCAGAGTGCTGGCCAAAAATG 60.938 52.381 7.01 2.28 42.53 2.32
708 723 6.759497 AGTCAAGTTGTTAGCTTCTGTTTT 57.241 33.333 2.11 0.00 0.00 2.43
827 842 0.810031 CATCCGATCCCGTGAACACC 60.810 60.000 0.00 0.00 0.00 4.16
830 845 2.975536 GATCCCGTGAACACCCGA 59.024 61.111 0.00 0.00 0.00 5.14
835 850 2.432628 CGTGAACACCCGAGCCTC 60.433 66.667 0.00 0.00 0.00 4.70
846 861 2.636412 CGAGCCTCAACACCGGAGA 61.636 63.158 9.46 0.00 34.24 3.71
851 866 3.516578 CTCAACACCGGAGAGGAAC 57.483 57.895 9.46 0.00 45.00 3.62
853 868 0.679505 TCAACACCGGAGAGGAACTG 59.320 55.000 9.46 0.00 41.55 3.16
854 869 0.951040 CAACACCGGAGAGGAACTGC 60.951 60.000 9.46 0.00 41.55 4.40
857 872 1.228894 ACCGGAGAGGAACTGCTCA 60.229 57.895 9.46 0.00 41.55 4.26
858 873 0.616111 ACCGGAGAGGAACTGCTCAT 60.616 55.000 9.46 0.00 41.55 2.90
860 875 1.757118 CCGGAGAGGAACTGCTCATAA 59.243 52.381 0.00 0.00 41.55 1.90
901 929 2.124570 CTTCGCCCCCACCATCTG 60.125 66.667 0.00 0.00 0.00 2.90
902 930 4.424711 TTCGCCCCCACCATCTGC 62.425 66.667 0.00 0.00 0.00 4.26
905 933 4.828296 GCCCCCACCATCTGCCTG 62.828 72.222 0.00 0.00 0.00 4.85
963 994 4.150454 CTCCTCCTCCCCTCGCCT 62.150 72.222 0.00 0.00 0.00 5.52
964 995 3.684628 TCCTCCTCCCCTCGCCTT 61.685 66.667 0.00 0.00 0.00 4.35
970 1001 3.984186 CTCCCCTCGCCTTCCCTCA 62.984 68.421 0.00 0.00 0.00 3.86
1185 1244 3.347077 AAGAAGCAGGATCTTGAGGTG 57.653 47.619 9.36 0.00 35.85 4.00
1192 1251 3.814283 GCAGGATCTTGAGGTGATTGATC 59.186 47.826 9.36 0.00 34.48 2.92
1204 1263 2.285220 GTGATTGATCGATGGTGGTTCG 59.715 50.000 0.54 0.00 37.94 3.95
1327 1386 1.503542 GCGTCTGCCAACATCAAGG 59.496 57.895 0.00 0.00 33.98 3.61
1418 1477 3.998341 GTGTTTACCGATTGCCTGAACTA 59.002 43.478 0.00 0.00 0.00 2.24
1460 1519 7.361542 CCGTTCTTGAATCTTGATTCATCTTGT 60.362 37.037 21.88 0.00 39.92 3.16
1461 1520 7.480855 CGTTCTTGAATCTTGATTCATCTTGTG 59.519 37.037 21.88 10.44 39.92 3.33
1829 1918 0.179045 CAGGAAGCAATACTCCCCGG 60.179 60.000 0.00 0.00 0.00 5.73
1830 1919 0.326238 AGGAAGCAATACTCCCCGGA 60.326 55.000 0.73 0.00 0.00 5.14
1835 1924 2.762459 AATACTCCCCGGAGCGCA 60.762 61.111 11.47 0.00 45.54 6.09
1862 1951 2.824041 CGGGGGCATCAACTTCGG 60.824 66.667 0.00 0.00 0.00 4.30
1864 1953 3.508840 GGGGCATCAACTTCGGCG 61.509 66.667 0.00 0.00 0.00 6.46
1956 2045 3.237741 GGAGGAGGCGGCAGCTAT 61.238 66.667 13.08 0.00 44.37 2.97
2046 2135 2.584608 CTCGGCTTCGGATTGGGT 59.415 61.111 0.00 0.00 34.13 4.51
2284 2376 1.444553 CGTTCTCGGCGCTTCTCTT 60.445 57.895 7.64 0.00 0.00 2.85
2318 2410 0.319555 GTCCTGCGTGCTGTTCTACA 60.320 55.000 0.00 0.00 0.00 2.74
2329 2421 2.479730 GCTGTTCTACATCGTCGGTCAT 60.480 50.000 0.00 0.00 0.00 3.06
2395 2488 4.478206 TGCCCTACTTCTCAATTCTCAG 57.522 45.455 0.00 0.00 0.00 3.35
2405 2631 6.149142 ACTTCTCAATTCTCAGTTTCTCATGC 59.851 38.462 0.00 0.00 0.00 4.06
2408 2634 6.315642 TCTCAATTCTCAGTTTCTCATGCATC 59.684 38.462 0.00 0.00 0.00 3.91
2410 2636 6.657966 TCAATTCTCAGTTTCTCATGCATCTT 59.342 34.615 0.00 0.00 0.00 2.40
2413 2639 5.554070 TCTCAGTTTCTCATGCATCTTTGA 58.446 37.500 0.00 0.00 0.00 2.69
2414 2640 5.410746 TCTCAGTTTCTCATGCATCTTTGAC 59.589 40.000 0.00 0.00 0.00 3.18
2415 2641 5.065235 TCAGTTTCTCATGCATCTTTGACA 58.935 37.500 0.00 0.00 0.00 3.58
2416 2642 5.532032 TCAGTTTCTCATGCATCTTTGACAA 59.468 36.000 0.00 0.00 0.00 3.18
2419 2645 4.025040 TCTCATGCATCTTTGACAAGGT 57.975 40.909 0.00 0.00 0.00 3.50
2541 3253 3.584834 GTGTTCCTCTTCTCTGAAGCTC 58.415 50.000 2.71 0.00 0.00 4.09
2611 3323 3.383761 GAATTGGTGTGGCTTTGAACTG 58.616 45.455 0.00 0.00 0.00 3.16
2617 3329 0.249031 GTGGCTTTGAACTGTGGTGC 60.249 55.000 0.00 0.00 0.00 5.01
2618 3330 0.682532 TGGCTTTGAACTGTGGTGCA 60.683 50.000 0.00 0.00 0.00 4.57
2619 3331 0.459489 GGCTTTGAACTGTGGTGCAA 59.541 50.000 0.00 0.00 39.07 4.08
2620 3332 1.069049 GGCTTTGAACTGTGGTGCAAT 59.931 47.619 0.00 0.00 40.35 3.56
2621 3333 2.295909 GGCTTTGAACTGTGGTGCAATA 59.704 45.455 0.00 0.00 40.35 1.90
2622 3334 3.308530 GCTTTGAACTGTGGTGCAATAC 58.691 45.455 0.00 0.00 40.35 1.89
2625 3337 3.483808 TGAACTGTGGTGCAATACTGA 57.516 42.857 13.14 0.00 0.00 3.41
2626 3338 4.019792 TGAACTGTGGTGCAATACTGAT 57.980 40.909 13.14 3.97 0.00 2.90
2627 3339 4.397420 TGAACTGTGGTGCAATACTGATT 58.603 39.130 13.14 6.03 0.00 2.57
2628 3340 4.216042 TGAACTGTGGTGCAATACTGATTG 59.784 41.667 13.14 0.00 44.62 2.67
2629 3341 3.754965 ACTGTGGTGCAATACTGATTGT 58.245 40.909 13.14 0.00 43.82 2.71
2630 3342 3.503363 ACTGTGGTGCAATACTGATTGTG 59.497 43.478 13.14 0.00 43.82 3.33
2631 3343 3.485394 TGTGGTGCAATACTGATTGTGT 58.515 40.909 0.00 0.00 43.82 3.72
2632 3344 3.252944 TGTGGTGCAATACTGATTGTGTG 59.747 43.478 0.00 0.00 43.82 3.82
2633 3345 3.253188 GTGGTGCAATACTGATTGTGTGT 59.747 43.478 0.00 0.00 43.82 3.72
2634 3346 3.252944 TGGTGCAATACTGATTGTGTGTG 59.747 43.478 0.00 0.00 43.82 3.82
2635 3347 3.501828 GGTGCAATACTGATTGTGTGTGA 59.498 43.478 0.00 0.00 43.82 3.58
2678 3390 9.838339 ACTCAAGTTTATCATAACCCTTCTATG 57.162 33.333 0.00 0.00 0.00 2.23
2679 3391 8.677148 TCAAGTTTATCATAACCCTTCTATGC 57.323 34.615 0.00 0.00 0.00 3.14
2680 3392 8.494433 TCAAGTTTATCATAACCCTTCTATGCT 58.506 33.333 0.00 0.00 0.00 3.79
2681 3393 9.125026 CAAGTTTATCATAACCCTTCTATGCTT 57.875 33.333 0.00 0.00 0.00 3.91
2682 3394 8.682936 AGTTTATCATAACCCTTCTATGCTTG 57.317 34.615 0.00 0.00 0.00 4.01
2684 3396 3.820557 TCATAACCCTTCTATGCTTGCC 58.179 45.455 0.00 0.00 0.00 4.52
2685 3397 2.325583 TAACCCTTCTATGCTTGCCG 57.674 50.000 0.00 0.00 0.00 5.69
2686 3398 0.328258 AACCCTTCTATGCTTGCCGT 59.672 50.000 0.00 0.00 0.00 5.68
2687 3399 0.328258 ACCCTTCTATGCTTGCCGTT 59.672 50.000 0.00 0.00 0.00 4.44
2688 3400 1.271926 ACCCTTCTATGCTTGCCGTTT 60.272 47.619 0.00 0.00 0.00 3.60
2689 3401 1.401905 CCCTTCTATGCTTGCCGTTTC 59.598 52.381 0.00 0.00 0.00 2.78
2690 3402 2.359900 CCTTCTATGCTTGCCGTTTCT 58.640 47.619 0.00 0.00 0.00 2.52
2691 3403 2.096496 CCTTCTATGCTTGCCGTTTCTG 59.904 50.000 0.00 0.00 0.00 3.02
2692 3404 2.760634 TCTATGCTTGCCGTTTCTGA 57.239 45.000 0.00 0.00 0.00 3.27
2695 3407 4.765273 TCTATGCTTGCCGTTTCTGAATA 58.235 39.130 0.00 0.00 0.00 1.75
2697 3409 1.463056 TGCTTGCCGTTTCTGAATACG 59.537 47.619 14.08 14.08 37.50 3.06
2707 3419 6.701432 CGTTTCTGAATACGGAGTTAAGTT 57.299 37.500 13.54 0.00 37.78 2.66
2708 3420 7.113704 CGTTTCTGAATACGGAGTTAAGTTT 57.886 36.000 13.54 0.00 37.78 2.66
2709 3421 7.225397 CGTTTCTGAATACGGAGTTAAGTTTC 58.775 38.462 13.54 0.00 37.78 2.78
2710 3422 7.115947 CGTTTCTGAATACGGAGTTAAGTTTCT 59.884 37.037 13.54 0.00 37.78 2.52
2711 3423 8.433893 GTTTCTGAATACGGAGTTAAGTTTCTC 58.566 37.037 0.00 0.00 37.78 2.87
2712 3424 6.628185 TCTGAATACGGAGTTAAGTTTCTCC 58.372 40.000 13.52 13.52 37.78 3.71
2713 3425 6.436532 TCTGAATACGGAGTTAAGTTTCTCCT 59.563 38.462 18.32 11.38 45.57 3.69
2714 3426 6.395629 TGAATACGGAGTTAAGTTTCTCCTG 58.604 40.000 18.32 15.06 45.57 3.86
2715 3427 5.997384 ATACGGAGTTAAGTTTCTCCTGT 57.003 39.130 18.32 18.13 45.57 4.00
2716 3428 4.254402 ACGGAGTTAAGTTTCTCCTGTC 57.746 45.455 18.32 1.12 45.57 3.51
2717 3429 3.640029 ACGGAGTTAAGTTTCTCCTGTCA 59.360 43.478 18.32 0.00 45.57 3.58
2718 3430 3.988517 CGGAGTTAAGTTTCTCCTGTCAC 59.011 47.826 18.32 0.36 45.57 3.67
2719 3431 4.500887 CGGAGTTAAGTTTCTCCTGTCACA 60.501 45.833 18.32 0.00 45.57 3.58
2720 3432 5.552178 GGAGTTAAGTTTCTCCTGTCACAT 58.448 41.667 15.30 0.00 44.68 3.21
2721 3433 5.639931 GGAGTTAAGTTTCTCCTGTCACATC 59.360 44.000 15.30 0.00 44.68 3.06
2722 3434 5.230942 AGTTAAGTTTCTCCTGTCACATCG 58.769 41.667 0.00 0.00 0.00 3.84
2723 3435 2.086054 AGTTTCTCCTGTCACATCGC 57.914 50.000 0.00 0.00 0.00 4.58
2724 3436 1.620819 AGTTTCTCCTGTCACATCGCT 59.379 47.619 0.00 0.00 0.00 4.93
2725 3437 1.728971 GTTTCTCCTGTCACATCGCTG 59.271 52.381 0.00 0.00 0.00 5.18
2726 3438 0.969149 TTCTCCTGTCACATCGCTGT 59.031 50.000 0.00 0.00 35.44 4.40
2727 3439 1.834188 TCTCCTGTCACATCGCTGTA 58.166 50.000 0.00 0.00 33.14 2.74
2728 3440 2.167662 TCTCCTGTCACATCGCTGTAA 58.832 47.619 0.00 0.00 33.14 2.41
2729 3441 2.760650 TCTCCTGTCACATCGCTGTAAT 59.239 45.455 0.00 0.00 33.14 1.89
2730 3442 2.862536 CTCCTGTCACATCGCTGTAATG 59.137 50.000 0.00 0.00 33.14 1.90
2731 3443 2.233676 TCCTGTCACATCGCTGTAATGT 59.766 45.455 0.00 0.00 37.85 2.71
2732 3444 3.445805 TCCTGTCACATCGCTGTAATGTA 59.554 43.478 0.00 0.00 35.62 2.29
2733 3445 3.798878 CCTGTCACATCGCTGTAATGTAG 59.201 47.826 0.00 0.00 35.62 2.74
2734 3446 3.186909 TGTCACATCGCTGTAATGTAGC 58.813 45.455 0.00 0.00 35.62 3.58
2735 3447 3.186909 GTCACATCGCTGTAATGTAGCA 58.813 45.455 0.00 0.00 41.18 3.49
2736 3448 3.804325 GTCACATCGCTGTAATGTAGCAT 59.196 43.478 0.00 0.00 41.18 3.79
2737 3449 4.982295 GTCACATCGCTGTAATGTAGCATA 59.018 41.667 0.00 0.00 41.18 3.14
2738 3450 4.982295 TCACATCGCTGTAATGTAGCATAC 59.018 41.667 0.00 0.00 41.18 2.39
2739 3451 4.150627 CACATCGCTGTAATGTAGCATACC 59.849 45.833 0.00 0.00 41.18 2.73
2740 3452 4.202212 ACATCGCTGTAATGTAGCATACCA 60.202 41.667 0.00 0.00 41.18 3.25
2741 3453 3.713288 TCGCTGTAATGTAGCATACCAC 58.287 45.455 0.00 0.00 42.12 4.16
2742 3454 3.383505 TCGCTGTAATGTAGCATACCACT 59.616 43.478 0.00 0.00 42.12 4.00
2743 3455 4.581409 TCGCTGTAATGTAGCATACCACTA 59.419 41.667 0.00 0.00 42.12 2.74
2744 3456 4.680110 CGCTGTAATGTAGCATACCACTAC 59.320 45.833 0.00 0.00 42.12 2.73
2755 3467 4.515191 AGCATACCACTACAGTGTTGTTTG 59.485 41.667 7.67 5.29 44.21 2.93
2760 3472 5.465935 ACCACTACAGTGTTGTTTGTTTTG 58.534 37.500 7.67 0.00 44.21 2.44
2761 3473 5.241949 ACCACTACAGTGTTGTTTGTTTTGA 59.758 36.000 7.67 0.00 44.21 2.69
2764 3476 6.861055 CACTACAGTGTTGTTTGTTTTGAGTT 59.139 34.615 7.67 0.00 40.96 3.01
2766 3478 7.923878 ACTACAGTGTTGTTTGTTTTGAGTTTT 59.076 29.630 0.00 0.00 38.76 2.43
2767 3479 6.942891 ACAGTGTTGTTTGTTTTGAGTTTTG 58.057 32.000 0.00 0.00 32.28 2.44
2768 3480 6.758886 ACAGTGTTGTTTGTTTTGAGTTTTGA 59.241 30.769 0.00 0.00 32.28 2.69
2773 3485 9.443283 TGTTGTTTGTTTTGAGTTTTGATTTTG 57.557 25.926 0.00 0.00 0.00 2.44
2774 3486 8.416424 GTTGTTTGTTTTGAGTTTTGATTTTGC 58.584 29.630 0.00 0.00 0.00 3.68
2777 3489 7.664082 TTGTTTTGAGTTTTGATTTTGCTCA 57.336 28.000 0.00 0.00 34.80 4.26
2778 3490 7.059448 TGTTTTGAGTTTTGATTTTGCTCAC 57.941 32.000 0.00 0.00 36.14 3.51
2779 3491 5.947503 TTTGAGTTTTGATTTTGCTCACG 57.052 34.783 0.00 0.00 36.14 4.35
2780 3492 4.891627 TGAGTTTTGATTTTGCTCACGA 57.108 36.364 0.00 0.00 32.09 4.35
2781 3493 4.847633 TGAGTTTTGATTTTGCTCACGAG 58.152 39.130 0.00 0.00 32.09 4.18
2782 3494 4.222114 GAGTTTTGATTTTGCTCACGAGG 58.778 43.478 0.00 0.00 0.00 4.63
2783 3495 3.632145 AGTTTTGATTTTGCTCACGAGGT 59.368 39.130 0.00 0.00 0.00 3.85
2784 3496 3.624326 TTTGATTTTGCTCACGAGGTG 57.376 42.857 0.00 0.00 34.45 4.00
2785 3497 2.542020 TGATTTTGCTCACGAGGTGA 57.458 45.000 0.00 0.00 40.50 4.02
2786 3498 3.057969 TGATTTTGCTCACGAGGTGAT 57.942 42.857 0.00 0.00 41.94 3.06
2787 3499 3.411446 TGATTTTGCTCACGAGGTGATT 58.589 40.909 0.00 0.00 41.94 2.57
2790 3502 4.647424 TTTTGCTCACGAGGTGATTTTT 57.353 36.364 0.00 0.00 41.94 1.94
2791 3503 5.759506 TTTTGCTCACGAGGTGATTTTTA 57.240 34.783 0.00 0.00 41.94 1.52
2792 3504 5.356882 TTTGCTCACGAGGTGATTTTTAG 57.643 39.130 0.00 0.00 41.94 1.85
2793 3505 2.742053 TGCTCACGAGGTGATTTTTAGC 59.258 45.455 0.00 0.00 41.94 3.09
2794 3506 2.742053 GCTCACGAGGTGATTTTTAGCA 59.258 45.455 0.00 0.00 41.94 3.49
2795 3507 3.424962 GCTCACGAGGTGATTTTTAGCAC 60.425 47.826 0.00 0.00 41.94 4.40
2796 3508 3.997021 CTCACGAGGTGATTTTTAGCACT 59.003 43.478 0.00 0.00 41.94 4.40
2797 3509 3.745975 TCACGAGGTGATTTTTAGCACTG 59.254 43.478 0.00 0.00 37.67 3.66
2798 3510 3.745975 CACGAGGTGATTTTTAGCACTGA 59.254 43.478 0.00 0.00 35.23 3.41
2799 3511 4.213270 CACGAGGTGATTTTTAGCACTGAA 59.787 41.667 0.00 0.00 35.23 3.02
2800 3512 5.003804 ACGAGGTGATTTTTAGCACTGAAT 58.996 37.500 0.00 0.00 35.43 2.57
2802 3514 6.024049 CGAGGTGATTTTTAGCACTGAATTC 58.976 40.000 0.00 0.00 35.43 2.17
2803 3515 6.272822 AGGTGATTTTTAGCACTGAATTCC 57.727 37.500 2.27 0.00 35.43 3.01
2806 3518 6.753744 GGTGATTTTTAGCACTGAATTCCATC 59.246 38.462 2.27 0.00 35.43 3.51
2807 3519 6.753744 GTGATTTTTAGCACTGAATTCCATCC 59.246 38.462 2.27 0.00 32.44 3.51
2808 3520 6.436847 TGATTTTTAGCACTGAATTCCATCCA 59.563 34.615 2.27 0.00 0.00 3.41
2809 3521 6.855763 TTTTTAGCACTGAATTCCATCCAT 57.144 33.333 2.27 0.00 0.00 3.41
2813 3525 3.117776 AGCACTGAATTCCATCCATGCTA 60.118 43.478 2.27 0.00 37.60 3.49
2814 3526 3.825014 GCACTGAATTCCATCCATGCTAT 59.175 43.478 2.27 0.00 0.00 2.97
2816 3528 3.825014 ACTGAATTCCATCCATGCTATGC 59.175 43.478 2.27 0.00 0.00 3.14
2820 3532 2.556144 TCCATCCATGCTATGCTGTC 57.444 50.000 0.00 0.00 0.00 3.51
2822 3534 2.152016 CCATCCATGCTATGCTGTCAG 58.848 52.381 0.00 0.00 0.00 3.51
2823 3535 2.486727 CCATCCATGCTATGCTGTCAGT 60.487 50.000 0.93 0.00 0.00 3.41
2825 3537 3.354948 TCCATGCTATGCTGTCAGTTT 57.645 42.857 0.93 0.00 0.00 2.66
2827 3539 3.011818 CCATGCTATGCTGTCAGTTTCA 58.988 45.455 0.93 0.00 0.00 2.69
2828 3540 3.441222 CCATGCTATGCTGTCAGTTTCAA 59.559 43.478 0.93 0.00 0.00 2.69
2829 3541 4.097437 CCATGCTATGCTGTCAGTTTCAAT 59.903 41.667 0.93 0.00 0.00 2.57
2831 3543 5.801350 TGCTATGCTGTCAGTTTCAATAC 57.199 39.130 0.93 0.00 0.00 1.89
2832 3544 5.491070 TGCTATGCTGTCAGTTTCAATACT 58.509 37.500 0.93 0.00 0.00 2.12
2833 3545 5.352293 TGCTATGCTGTCAGTTTCAATACTG 59.648 40.000 0.93 0.00 45.46 2.74
2871 3583 2.174334 AGGCACTGCATTGTTAGCG 58.826 52.632 5.89 0.00 37.18 4.26
2872 3584 0.321564 AGGCACTGCATTGTTAGCGA 60.322 50.000 5.89 0.00 37.18 4.93
2873 3585 0.734889 GGCACTGCATTGTTAGCGAT 59.265 50.000 5.89 0.00 33.85 4.58
2874 3586 1.939934 GGCACTGCATTGTTAGCGATA 59.060 47.619 5.89 0.00 33.85 2.92
2875 3587 2.549754 GGCACTGCATTGTTAGCGATAT 59.450 45.455 5.89 0.00 33.85 1.63
2876 3588 3.548587 GCACTGCATTGTTAGCGATATG 58.451 45.455 5.89 0.00 33.85 1.78
2877 3589 3.002656 GCACTGCATTGTTAGCGATATGT 59.997 43.478 5.89 0.00 33.85 2.29
2878 3590 4.211164 GCACTGCATTGTTAGCGATATGTA 59.789 41.667 5.89 0.00 33.85 2.29
2879 3591 5.106948 GCACTGCATTGTTAGCGATATGTAT 60.107 40.000 5.89 0.00 33.85 2.29
2880 3592 6.566564 GCACTGCATTGTTAGCGATATGTATT 60.567 38.462 5.89 0.00 33.85 1.89
2881 3593 7.355017 CACTGCATTGTTAGCGATATGTATTT 58.645 34.615 0.00 0.00 33.85 1.40
2882 3594 7.531871 CACTGCATTGTTAGCGATATGTATTTC 59.468 37.037 0.00 0.00 33.85 2.17
2883 3595 7.442364 ACTGCATTGTTAGCGATATGTATTTCT 59.558 33.333 0.00 0.00 33.85 2.52
2884 3596 7.796838 TGCATTGTTAGCGATATGTATTTCTC 58.203 34.615 0.00 0.00 33.85 2.87
2885 3597 7.440856 TGCATTGTTAGCGATATGTATTTCTCA 59.559 33.333 0.00 0.00 33.85 3.27
2886 3598 7.954248 GCATTGTTAGCGATATGTATTTCTCAG 59.046 37.037 0.00 0.00 0.00 3.35
2887 3599 7.408132 TTGTTAGCGATATGTATTTCTCAGC 57.592 36.000 0.00 0.00 0.00 4.26
2888 3600 6.749139 TGTTAGCGATATGTATTTCTCAGCT 58.251 36.000 0.00 0.00 36.36 4.24
2889 3601 6.863645 TGTTAGCGATATGTATTTCTCAGCTC 59.136 38.462 0.00 0.00 34.12 4.09
2890 3602 5.459536 AGCGATATGTATTTCTCAGCTCA 57.540 39.130 0.00 0.00 0.00 4.26
2891 3603 6.035368 AGCGATATGTATTTCTCAGCTCAT 57.965 37.500 0.00 0.00 0.00 2.90
2892 3604 7.163001 AGCGATATGTATTTCTCAGCTCATA 57.837 36.000 0.00 0.00 0.00 2.15
2895 3607 7.920151 GCGATATGTATTTCTCAGCTCATAGAT 59.080 37.037 0.00 0.00 0.00 1.98
2960 3678 4.267928 GTGTATATCGAGGTGACTGTTTGC 59.732 45.833 0.00 0.00 44.43 3.68
2961 3679 2.380084 TATCGAGGTGACTGTTTGCC 57.620 50.000 0.00 0.00 44.43 4.52
2965 3683 1.270094 CGAGGTGACTGTTTGCCACTA 60.270 52.381 0.00 0.00 44.43 2.74
2977 3695 7.147976 ACTGTTTGCCACTAAAATTCAGAATC 58.852 34.615 0.00 0.00 0.00 2.52
2979 3697 7.147312 TGTTTGCCACTAAAATTCAGAATCAG 58.853 34.615 0.00 0.00 0.00 2.90
2986 3704 6.259608 CACTAAAATTCAGAATCAGCTCCGAT 59.740 38.462 0.00 0.00 0.00 4.18
2990 3708 5.543507 ATTCAGAATCAGCTCCGATTAGT 57.456 39.130 0.00 0.00 35.74 2.24
2991 3709 5.344743 TTCAGAATCAGCTCCGATTAGTT 57.655 39.130 0.00 0.00 35.74 2.24
2995 3713 5.918011 CAGAATCAGCTCCGATTAGTTCTAC 59.082 44.000 0.00 0.00 35.74 2.59
3001 3735 2.686915 CTCCGATTAGTTCTACGGTGGT 59.313 50.000 0.00 0.00 44.72 4.16
3039 3773 5.065859 TGAATTTCAGTCTCTTCACGCAAAA 59.934 36.000 0.00 0.00 0.00 2.44
3044 3778 5.510671 TCAGTCTCTTCACGCAAAATTTTC 58.489 37.500 0.00 0.00 0.00 2.29
3078 3812 4.238514 GTTCTTCAGTGACAGTTAGCGAT 58.761 43.478 0.00 0.00 0.00 4.58
3110 3844 5.441718 TCAGGATTCAGCAAAAGGATAGT 57.558 39.130 0.00 0.00 0.00 2.12
3112 3846 6.957631 TCAGGATTCAGCAAAAGGATAGTTA 58.042 36.000 0.00 0.00 0.00 2.24
3113 3847 6.823689 TCAGGATTCAGCAAAAGGATAGTTAC 59.176 38.462 0.00 0.00 0.00 2.50
3114 3848 6.599244 CAGGATTCAGCAAAAGGATAGTTACA 59.401 38.462 0.00 0.00 0.00 2.41
3115 3849 7.284034 CAGGATTCAGCAAAAGGATAGTTACAT 59.716 37.037 0.00 0.00 0.00 2.29
3116 3850 8.494433 AGGATTCAGCAAAAGGATAGTTACATA 58.506 33.333 0.00 0.00 0.00 2.29
3117 3851 8.560374 GGATTCAGCAAAAGGATAGTTACATAC 58.440 37.037 0.00 0.00 0.00 2.39
3118 3852 9.331282 GATTCAGCAAAAGGATAGTTACATACT 57.669 33.333 0.00 0.00 41.04 2.12
3119 3853 8.492673 TTCAGCAAAAGGATAGTTACATACTG 57.507 34.615 0.00 0.00 37.73 2.74
3153 3887 1.354368 ACATTAGGGGGTCACACAAGG 59.646 52.381 0.00 0.00 0.00 3.61
3159 3893 1.150536 GGGTCACACAAGGCCTTGA 59.849 57.895 44.50 25.13 42.93 3.02
3163 3897 2.029918 GGTCACACAAGGCCTTGAAATC 60.030 50.000 44.50 28.74 42.93 2.17
3194 3930 6.987992 TCTATACTTTGTCTTTTGTTGGACGT 59.012 34.615 0.00 0.00 35.45 4.34
3195 3931 4.091453 ACTTTGTCTTTTGTTGGACGTG 57.909 40.909 0.00 0.00 35.45 4.49
3215 3951 4.680708 CGTGTCCCTGTTAGAACATAGCAT 60.681 45.833 0.00 0.00 38.41 3.79
3216 3952 5.186198 GTGTCCCTGTTAGAACATAGCATT 58.814 41.667 0.00 0.00 38.41 3.56
3217 3953 5.065218 GTGTCCCTGTTAGAACATAGCATTG 59.935 44.000 0.00 0.00 38.41 2.82
3218 3954 5.186198 GTCCCTGTTAGAACATAGCATTGT 58.814 41.667 0.00 0.00 38.41 2.71
3219 3955 5.648092 GTCCCTGTTAGAACATAGCATTGTT 59.352 40.000 4.18 4.18 42.37 2.83
3220 3956 6.151144 GTCCCTGTTAGAACATAGCATTGTTT 59.849 38.462 5.85 0.72 39.85 2.83
3221 3957 6.719370 TCCCTGTTAGAACATAGCATTGTTTT 59.281 34.615 5.85 3.54 39.85 2.43
3222 3958 6.808212 CCCTGTTAGAACATAGCATTGTTTTG 59.192 38.462 5.85 0.00 39.85 2.44
3223 3959 7.370383 CCTGTTAGAACATAGCATTGTTTTGT 58.630 34.615 5.85 0.00 39.85 2.83
3224 3960 7.538678 CCTGTTAGAACATAGCATTGTTTTGTC 59.461 37.037 5.85 0.00 39.85 3.18
3225 3961 7.935520 TGTTAGAACATAGCATTGTTTTGTCA 58.064 30.769 5.85 2.95 39.85 3.58
3226 3962 8.075574 TGTTAGAACATAGCATTGTTTTGTCAG 58.924 33.333 5.85 0.00 39.85 3.51
3227 3963 6.639632 AGAACATAGCATTGTTTTGTCAGT 57.360 33.333 5.85 0.00 39.85 3.41
3228 3964 6.441274 AGAACATAGCATTGTTTTGTCAGTG 58.559 36.000 5.85 0.00 39.85 3.66
3229 3965 4.549458 ACATAGCATTGTTTTGTCAGTGC 58.451 39.130 6.15 6.15 46.43 4.40
3230 3966 2.514205 AGCATTGTTTTGTCAGTGCC 57.486 45.000 9.75 0.00 46.98 5.01
3231 3967 2.034124 AGCATTGTTTTGTCAGTGCCT 58.966 42.857 9.75 0.00 46.98 4.75
3232 3968 2.431782 AGCATTGTTTTGTCAGTGCCTT 59.568 40.909 9.75 0.00 46.98 4.35
3233 3969 3.118665 AGCATTGTTTTGTCAGTGCCTTT 60.119 39.130 9.75 0.00 46.98 3.11
3234 3970 3.001533 GCATTGTTTTGTCAGTGCCTTTG 59.998 43.478 3.45 0.00 42.46 2.77
3235 3971 4.431809 CATTGTTTTGTCAGTGCCTTTGA 58.568 39.130 0.00 0.00 0.00 2.69
3236 3972 4.527509 TTGTTTTGTCAGTGCCTTTGAA 57.472 36.364 0.00 0.00 0.00 2.69
3237 3973 3.843999 TGTTTTGTCAGTGCCTTTGAAC 58.156 40.909 0.00 0.00 0.00 3.18
3238 3974 3.509575 TGTTTTGTCAGTGCCTTTGAACT 59.490 39.130 0.00 0.00 0.00 3.01
3239 3975 3.781079 TTTGTCAGTGCCTTTGAACTG 57.219 42.857 0.00 0.00 44.23 3.16
3240 3976 2.418368 TGTCAGTGCCTTTGAACTGT 57.582 45.000 0.84 0.00 43.49 3.55
3241 3977 2.722094 TGTCAGTGCCTTTGAACTGTT 58.278 42.857 0.00 0.00 43.49 3.16
3242 3978 2.423185 TGTCAGTGCCTTTGAACTGTTG 59.577 45.455 0.00 0.00 43.49 3.33
3243 3979 2.423538 GTCAGTGCCTTTGAACTGTTGT 59.576 45.455 0.00 0.00 43.49 3.32
3244 3980 2.423185 TCAGTGCCTTTGAACTGTTGTG 59.577 45.455 0.00 0.00 43.49 3.33
3245 3981 1.134946 AGTGCCTTTGAACTGTTGTGC 59.865 47.619 0.00 0.00 0.00 4.57
3246 3982 0.459489 TGCCTTTGAACTGTTGTGCC 59.541 50.000 0.00 0.00 0.00 5.01
3247 3983 0.459489 GCCTTTGAACTGTTGTGCCA 59.541 50.000 0.00 0.00 0.00 4.92
3248 3984 1.069049 GCCTTTGAACTGTTGTGCCAT 59.931 47.619 0.00 0.00 0.00 4.40
3249 3985 2.746269 CCTTTGAACTGTTGTGCCATG 58.254 47.619 0.00 0.00 0.00 3.66
3250 3986 2.546373 CCTTTGAACTGTTGTGCCATGG 60.546 50.000 7.63 7.63 0.00 3.66
3251 3987 1.774110 TTGAACTGTTGTGCCATGGT 58.226 45.000 14.67 0.00 0.00 3.55
3252 3988 1.031235 TGAACTGTTGTGCCATGGTG 58.969 50.000 14.67 0.00 0.00 4.17
3253 3989 1.317613 GAACTGTTGTGCCATGGTGA 58.682 50.000 14.67 0.00 0.00 4.02
3254 3990 1.888512 GAACTGTTGTGCCATGGTGAT 59.111 47.619 14.67 0.00 0.00 3.06
3255 3991 1.999648 ACTGTTGTGCCATGGTGATT 58.000 45.000 14.67 0.00 0.00 2.57
3256 3992 2.318908 ACTGTTGTGCCATGGTGATTT 58.681 42.857 14.67 0.00 0.00 2.17
3257 3993 2.036217 ACTGTTGTGCCATGGTGATTTG 59.964 45.455 14.67 1.60 0.00 2.32
3258 3994 2.036217 CTGTTGTGCCATGGTGATTTGT 59.964 45.455 14.67 0.00 0.00 2.83
3259 3995 2.223994 TGTTGTGCCATGGTGATTTGTG 60.224 45.455 14.67 0.00 0.00 3.33
3260 3996 1.992538 TGTGCCATGGTGATTTGTGA 58.007 45.000 14.67 0.00 0.00 3.58
3261 3997 2.314246 TGTGCCATGGTGATTTGTGAA 58.686 42.857 14.67 0.00 0.00 3.18
3262 3998 2.898612 TGTGCCATGGTGATTTGTGAAT 59.101 40.909 14.67 0.00 0.00 2.57
3263 3999 4.085009 TGTGCCATGGTGATTTGTGAATA 58.915 39.130 14.67 0.00 0.00 1.75
3264 4000 4.525874 TGTGCCATGGTGATTTGTGAATAA 59.474 37.500 14.67 0.00 0.00 1.40
3265 4001 4.864247 GTGCCATGGTGATTTGTGAATAAC 59.136 41.667 14.67 0.00 0.00 1.89
3266 4002 4.104776 GCCATGGTGATTTGTGAATAACG 58.895 43.478 14.67 0.00 28.59 3.18
3267 4003 4.142491 GCCATGGTGATTTGTGAATAACGA 60.142 41.667 14.67 0.00 28.59 3.85
3268 4004 5.621104 GCCATGGTGATTTGTGAATAACGAA 60.621 40.000 14.67 0.00 36.57 3.85
3269 4005 6.385843 CCATGGTGATTTGTGAATAACGAAA 58.614 36.000 2.57 0.00 35.73 3.46
3270 4006 6.865726 CCATGGTGATTTGTGAATAACGAAAA 59.134 34.615 2.57 0.00 35.73 2.29
3271 4007 7.383572 CCATGGTGATTTGTGAATAACGAAAAA 59.616 33.333 2.57 0.00 35.73 1.94
3294 4030 9.952188 AAAAAGTTCAGAATAACTCAAGTTAGC 57.048 29.630 8.46 3.85 42.94 3.09
3295 4031 8.677148 AAAGTTCAGAATAACTCAAGTTAGCA 57.323 30.769 8.46 0.00 42.94 3.49
3296 4032 8.854614 AAGTTCAGAATAACTCAAGTTAGCAT 57.145 30.769 8.46 0.00 42.94 3.79
3297 4033 8.261492 AGTTCAGAATAACTCAAGTTAGCATG 57.739 34.615 8.46 6.69 42.94 4.06
3298 4034 7.880195 AGTTCAGAATAACTCAAGTTAGCATGT 59.120 33.333 8.46 0.00 42.94 3.21
3299 4035 7.601073 TCAGAATAACTCAAGTTAGCATGTG 57.399 36.000 8.46 6.43 42.94 3.21
3300 4036 6.092670 TCAGAATAACTCAAGTTAGCATGTGC 59.907 38.462 8.46 0.00 42.94 4.57
3301 4037 4.864916 ATAACTCAAGTTAGCATGTGCG 57.135 40.909 8.46 0.00 42.94 5.34
3302 4038 3.920446 TAACTCAAGTTAGCATGTGCGA 58.080 40.909 0.00 0.00 41.64 5.10
3314 4050 2.202743 GTGCGAGTGCCTGCGATA 60.203 61.111 0.00 0.00 41.78 2.92
3354 4090 3.520569 GTCTCTTCAGACTCCAGATTGC 58.479 50.000 0.00 0.00 45.20 3.56
3355 4091 2.499289 TCTCTTCAGACTCCAGATTGCC 59.501 50.000 0.00 0.00 0.00 4.52
3356 4092 2.500910 CTCTTCAGACTCCAGATTGCCT 59.499 50.000 0.00 0.00 0.00 4.75
3357 4093 2.499289 TCTTCAGACTCCAGATTGCCTC 59.501 50.000 0.00 0.00 0.00 4.70
3358 4094 1.942776 TCAGACTCCAGATTGCCTCA 58.057 50.000 0.00 0.00 0.00 3.86
3359 4095 1.552337 TCAGACTCCAGATTGCCTCAC 59.448 52.381 0.00 0.00 0.00 3.51
3360 4096 1.554160 CAGACTCCAGATTGCCTCACT 59.446 52.381 0.00 0.00 0.00 3.41
3361 4097 2.027377 CAGACTCCAGATTGCCTCACTT 60.027 50.000 0.00 0.00 0.00 3.16
3362 4098 2.027377 AGACTCCAGATTGCCTCACTTG 60.027 50.000 0.00 0.00 0.00 3.16
3363 4099 1.093159 CTCCAGATTGCCTCACTTGC 58.907 55.000 0.00 0.00 0.00 4.01
3364 4100 0.401356 TCCAGATTGCCTCACTTGCA 59.599 50.000 0.00 0.00 36.84 4.08
3365 4101 0.809385 CCAGATTGCCTCACTTGCAG 59.191 55.000 0.00 0.00 40.35 4.41
3366 4102 1.531423 CAGATTGCCTCACTTGCAGT 58.469 50.000 0.00 0.00 40.35 4.40
3367 4103 1.884579 CAGATTGCCTCACTTGCAGTT 59.115 47.619 0.00 0.00 40.35 3.16
3368 4104 2.295349 CAGATTGCCTCACTTGCAGTTT 59.705 45.455 0.00 0.00 40.35 2.66
3369 4105 2.961062 AGATTGCCTCACTTGCAGTTTT 59.039 40.909 0.00 0.00 40.35 2.43
3370 4106 2.869233 TTGCCTCACTTGCAGTTTTC 57.131 45.000 0.00 0.00 40.35 2.29
3371 4107 2.057137 TGCCTCACTTGCAGTTTTCT 57.943 45.000 0.00 0.00 34.05 2.52
3372 4108 3.207265 TGCCTCACTTGCAGTTTTCTA 57.793 42.857 0.00 0.00 34.05 2.10
3373 4109 3.550820 TGCCTCACTTGCAGTTTTCTAA 58.449 40.909 0.00 0.00 34.05 2.10
3374 4110 3.951037 TGCCTCACTTGCAGTTTTCTAAA 59.049 39.130 0.00 0.00 34.05 1.85
3375 4111 4.202010 TGCCTCACTTGCAGTTTTCTAAAC 60.202 41.667 0.00 0.00 34.05 2.01
3376 4112 4.036852 GCCTCACTTGCAGTTTTCTAAACT 59.963 41.667 0.00 0.00 0.00 2.66
3377 4113 5.752712 CCTCACTTGCAGTTTTCTAAACTC 58.247 41.667 2.00 0.07 0.00 3.01
3378 4114 5.529060 CCTCACTTGCAGTTTTCTAAACTCT 59.471 40.000 2.00 0.00 0.00 3.24
3379 4115 6.363577 TCACTTGCAGTTTTCTAAACTCTG 57.636 37.500 2.00 2.14 0.00 3.35
3383 4119 4.411993 GCAGTTTTCTAAACTCTGCCTC 57.588 45.455 15.20 0.00 43.55 4.70
3384 4120 3.815401 GCAGTTTTCTAAACTCTGCCTCA 59.185 43.478 15.20 0.00 43.55 3.86
3385 4121 4.083590 GCAGTTTTCTAAACTCTGCCTCAG 60.084 45.833 15.20 0.00 43.55 3.35
3386 4122 5.300752 CAGTTTTCTAAACTCTGCCTCAGA 58.699 41.667 2.00 0.00 38.25 3.27
3387 4123 5.760253 CAGTTTTCTAAACTCTGCCTCAGAA 59.240 40.000 2.00 0.00 40.18 3.02
3388 4124 6.429385 CAGTTTTCTAAACTCTGCCTCAGAAT 59.571 38.462 2.00 0.00 40.18 2.40
3389 4125 6.429385 AGTTTTCTAAACTCTGCCTCAGAATG 59.571 38.462 0.00 0.00 40.18 2.67
3390 4126 5.489792 TTCTAAACTCTGCCTCAGAATGT 57.510 39.130 0.00 0.00 40.18 2.71
3391 4127 5.489792 TCTAAACTCTGCCTCAGAATGTT 57.510 39.130 0.00 0.00 40.18 2.71
3392 4128 6.605471 TCTAAACTCTGCCTCAGAATGTTA 57.395 37.500 0.00 0.00 40.18 2.41
3393 4129 6.398918 TCTAAACTCTGCCTCAGAATGTTAC 58.601 40.000 0.00 0.00 40.18 2.50
3394 4130 4.623932 AACTCTGCCTCAGAATGTTACA 57.376 40.909 0.00 0.00 40.18 2.41
3395 4131 4.833478 ACTCTGCCTCAGAATGTTACAT 57.167 40.909 0.00 0.00 40.18 2.29
3396 4132 4.764172 ACTCTGCCTCAGAATGTTACATC 58.236 43.478 0.00 0.00 40.18 3.06
3397 4133 4.125703 CTCTGCCTCAGAATGTTACATCC 58.874 47.826 0.00 0.00 40.18 3.51
3398 4134 3.519107 TCTGCCTCAGAATGTTACATCCA 59.481 43.478 0.00 0.00 37.57 3.41
3399 4135 4.164796 TCTGCCTCAGAATGTTACATCCAT 59.835 41.667 0.00 0.00 37.57 3.41
3400 4136 4.858850 TGCCTCAGAATGTTACATCCATT 58.141 39.130 0.00 0.00 37.40 3.16
3401 4137 5.263599 TGCCTCAGAATGTTACATCCATTT 58.736 37.500 0.00 0.00 37.40 2.32
3402 4138 5.716228 TGCCTCAGAATGTTACATCCATTTT 59.284 36.000 0.00 0.00 37.40 1.82
3403 4139 6.211184 TGCCTCAGAATGTTACATCCATTTTT 59.789 34.615 0.00 0.00 37.40 1.94
3404 4140 6.753744 GCCTCAGAATGTTACATCCATTTTTC 59.246 38.462 0.00 0.00 37.40 2.29
3405 4141 6.968904 CCTCAGAATGTTACATCCATTTTTCG 59.031 38.462 0.00 0.00 37.40 3.46
3406 4142 7.148255 CCTCAGAATGTTACATCCATTTTTCGA 60.148 37.037 0.00 0.00 37.40 3.71
3407 4143 7.526608 TCAGAATGTTACATCCATTTTTCGAC 58.473 34.615 0.00 0.00 37.40 4.20
3408 4144 7.390440 TCAGAATGTTACATCCATTTTTCGACT 59.610 33.333 0.00 0.00 37.40 4.18
3409 4145 7.693951 CAGAATGTTACATCCATTTTTCGACTC 59.306 37.037 0.00 0.00 32.84 3.36
3410 4146 7.390440 AGAATGTTACATCCATTTTTCGACTCA 59.610 33.333 0.00 0.00 32.84 3.41
3411 4147 6.236017 TGTTACATCCATTTTTCGACTCAC 57.764 37.500 0.00 0.00 0.00 3.51
3412 4148 5.995282 TGTTACATCCATTTTTCGACTCACT 59.005 36.000 0.00 0.00 0.00 3.41
3413 4149 6.147164 TGTTACATCCATTTTTCGACTCACTC 59.853 38.462 0.00 0.00 0.00 3.51
3414 4150 4.899502 ACATCCATTTTTCGACTCACTCT 58.100 39.130 0.00 0.00 0.00 3.24
3415 4151 5.308825 ACATCCATTTTTCGACTCACTCTT 58.691 37.500 0.00 0.00 0.00 2.85
3416 4152 5.765182 ACATCCATTTTTCGACTCACTCTTT 59.235 36.000 0.00 0.00 0.00 2.52
3417 4153 6.263168 ACATCCATTTTTCGACTCACTCTTTT 59.737 34.615 0.00 0.00 0.00 2.27
3418 4154 6.693315 TCCATTTTTCGACTCACTCTTTTT 57.307 33.333 0.00 0.00 0.00 1.94
3449 4185 8.986477 AGATTAGCACATTTTGGTGTTATTTC 57.014 30.769 0.00 0.00 40.89 2.17
3450 4186 8.806146 AGATTAGCACATTTTGGTGTTATTTCT 58.194 29.630 0.00 0.00 40.89 2.52
3451 4187 8.761575 ATTAGCACATTTTGGTGTTATTTCTG 57.238 30.769 0.00 0.00 40.89 3.02
3452 4188 6.160576 AGCACATTTTGGTGTTATTTCTGT 57.839 33.333 0.00 0.00 40.89 3.41
3453 4189 6.581712 AGCACATTTTGGTGTTATTTCTGTT 58.418 32.000 0.00 0.00 40.89 3.16
3454 4190 6.701400 AGCACATTTTGGTGTTATTTCTGTTC 59.299 34.615 0.00 0.00 40.89 3.18
3455 4191 6.701400 GCACATTTTGGTGTTATTTCTGTTCT 59.299 34.615 0.00 0.00 40.89 3.01
3456 4192 7.224557 GCACATTTTGGTGTTATTTCTGTTCTT 59.775 33.333 0.00 0.00 40.89 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 107 0.939577 TCGCTGTCGAAGAGCACAAC 60.940 55.000 15.85 0.00 42.44 3.32
107 108 0.664466 CTCGCTGTCGAAGAGCACAA 60.664 55.000 15.85 2.60 44.98 3.33
109 110 1.803519 CCTCGCTGTCGAAGAGCAC 60.804 63.158 15.85 0.00 44.98 4.40
121 122 3.349006 CACGCTTGCAACCTCGCT 61.349 61.111 0.00 0.00 0.00 4.93
136 137 1.954146 TTGCAGCTTCGACGTCCAC 60.954 57.895 10.58 0.00 0.00 4.02
233 236 1.202405 GCTTTTCCACACACCAGTTGG 60.202 52.381 0.00 0.00 42.17 3.77
389 393 1.887242 GTGCGTGCAGACTTGTCCA 60.887 57.895 0.00 0.00 0.00 4.02
438 445 0.423544 ATCCCACTTCCTCTCCCCTT 59.576 55.000 0.00 0.00 0.00 3.95
449 456 2.434884 CGTCGCAGCATCCCACTT 60.435 61.111 0.00 0.00 0.00 3.16
450 457 3.362399 CTCGTCGCAGCATCCCACT 62.362 63.158 0.00 0.00 0.00 4.00
453 460 4.819761 TGCTCGTCGCAGCATCCC 62.820 66.667 13.14 0.00 44.73 3.85
470 477 2.752238 CCTCTCCCTGTCGTCGCT 60.752 66.667 0.00 0.00 0.00 4.93
537 544 2.781595 CTTCAACCTCCGTCCCCACG 62.782 65.000 0.00 0.00 46.29 4.94
599 608 1.078143 GCCGTTCAATCTGGGCTCT 60.078 57.895 0.00 0.00 42.29 4.09
634 643 2.126502 CGCGCCGGCTGAATTTTT 60.127 55.556 26.68 0.00 36.88 1.94
677 687 8.560374 AGAAGCTAACAACTTGACTTTTCATAC 58.440 33.333 0.00 0.00 0.00 2.39
727 742 7.644986 AACAACGTTTTCTCATGTTCAAAAA 57.355 28.000 0.00 0.00 28.61 1.94
728 743 8.024285 ACTAACAACGTTTTCTCATGTTCAAAA 58.976 29.630 0.00 0.00 35.89 2.44
729 744 7.531716 ACTAACAACGTTTTCTCATGTTCAAA 58.468 30.769 0.00 0.00 35.89 2.69
730 745 7.079182 ACTAACAACGTTTTCTCATGTTCAA 57.921 32.000 0.00 0.00 35.89 2.69
731 746 6.671614 ACTAACAACGTTTTCTCATGTTCA 57.328 33.333 0.00 0.00 35.89 3.18
732 747 7.268447 GCATACTAACAACGTTTTCTCATGTTC 59.732 37.037 0.00 0.00 35.89 3.18
733 748 7.075741 GCATACTAACAACGTTTTCTCATGTT 58.924 34.615 0.00 0.88 37.86 2.71
734 749 6.203915 TGCATACTAACAACGTTTTCTCATGT 59.796 34.615 0.00 0.00 0.00 3.21
735 750 6.598525 TGCATACTAACAACGTTTTCTCATG 58.401 36.000 0.00 0.00 0.00 3.07
736 751 6.795098 TGCATACTAACAACGTTTTCTCAT 57.205 33.333 0.00 0.00 0.00 2.90
798 813 3.482232 GATCGGATGGTGGGCCCTG 62.482 68.421 25.70 0.00 0.00 4.45
827 842 3.649277 CTCCGGTGTTGAGGCTCGG 62.649 68.421 10.42 6.88 41.80 4.63
830 845 2.286523 CCTCTCCGGTGTTGAGGCT 61.287 63.158 17.40 0.00 40.52 4.58
835 850 0.951040 GCAGTTCCTCTCCGGTGTTG 60.951 60.000 0.00 0.00 0.00 3.33
846 861 5.675538 GGTTATGACTTATGAGCAGTTCCT 58.324 41.667 0.00 0.00 0.00 3.36
849 864 3.871594 GCGGTTATGACTTATGAGCAGTT 59.128 43.478 0.00 0.00 0.00 3.16
851 866 3.722147 AGCGGTTATGACTTATGAGCAG 58.278 45.455 0.00 0.00 0.00 4.24
852 867 3.717707 GAGCGGTTATGACTTATGAGCA 58.282 45.455 0.00 0.00 0.00 4.26
853 868 2.726760 CGAGCGGTTATGACTTATGAGC 59.273 50.000 0.00 0.00 0.00 4.26
854 869 2.726760 GCGAGCGGTTATGACTTATGAG 59.273 50.000 0.00 0.00 0.00 2.90
857 872 1.767289 CGCGAGCGGTTATGACTTAT 58.233 50.000 9.90 0.00 35.56 1.73
858 873 3.245443 CGCGAGCGGTTATGACTTA 57.755 52.632 9.90 0.00 35.56 2.24
902 930 4.366684 AAAGAAGGCGGGGGCAGG 62.367 66.667 0.00 0.00 0.00 4.85
903 931 2.751837 GAAAGAAGGCGGGGGCAG 60.752 66.667 0.00 0.00 0.00 4.85
904 932 2.648613 TTTGAAAGAAGGCGGGGGCA 62.649 55.000 0.00 0.00 0.00 5.36
905 933 1.877576 CTTTGAAAGAAGGCGGGGGC 61.878 60.000 0.00 0.00 0.00 5.80
963 994 0.530744 CGTGGACGAAGATGAGGGAA 59.469 55.000 0.00 0.00 43.02 3.97
964 995 1.945354 GCGTGGACGAAGATGAGGGA 61.945 60.000 2.73 0.00 43.02 4.20
970 1001 0.320374 TTCTTGGCGTGGACGAAGAT 59.680 50.000 2.73 0.00 43.02 2.40
1122 1181 2.126071 ACGGGATTGTGCGTCTCG 60.126 61.111 0.00 0.00 44.83 4.04
1185 1244 1.867233 CCGAACCACCATCGATCAATC 59.133 52.381 0.00 0.00 42.76 2.67
1192 1251 2.885644 CGCTCCGAACCACCATCG 60.886 66.667 0.00 0.00 39.92 3.84
1308 1367 1.133253 CTTGATGTTGGCAGACGCG 59.867 57.895 3.53 3.53 39.92 6.01
1460 1519 1.671850 GGAACTCTGACGAATTCGCCA 60.672 52.381 27.03 21.52 44.43 5.69
1461 1520 1.000145 GGAACTCTGACGAATTCGCC 59.000 55.000 27.03 17.70 44.43 5.54
1675 1764 2.639065 TCAAGAACGCAACCAAGAACT 58.361 42.857 0.00 0.00 0.00 3.01
1819 1908 2.524394 ATGCGCTCCGGGGAGTAT 60.524 61.111 4.80 3.20 43.70 2.12
2241 2333 2.093537 GATGCCGTAGAGCCTCCTGG 62.094 65.000 0.00 0.00 0.00 4.45
2243 2335 1.834822 GGATGCCGTAGAGCCTCCT 60.835 63.158 1.17 0.00 42.45 3.69
2249 2341 2.336809 GGCGAGGATGCCGTAGAG 59.663 66.667 0.00 0.00 46.75 2.43
2318 2410 1.008424 CGCTGCTATGACCGACGAT 60.008 57.895 0.00 0.00 0.00 3.73
2395 2488 5.159209 CCTTGTCAAAGATGCATGAGAAAC 58.841 41.667 2.46 0.00 35.19 2.78
2405 2631 9.311916 TCAACAAAAATTACCTTGTCAAAGATG 57.688 29.630 2.10 0.00 34.71 2.90
2408 2634 9.533253 AGATCAACAAAAATTACCTTGTCAAAG 57.467 29.630 0.00 0.00 34.71 2.77
2410 2636 9.883142 AAAGATCAACAAAAATTACCTTGTCAA 57.117 25.926 0.00 0.00 34.71 3.18
2413 2639 9.533253 CAGAAAGATCAACAAAAATTACCTTGT 57.467 29.630 0.00 0.00 37.36 3.16
2414 2640 9.533253 ACAGAAAGATCAACAAAAATTACCTTG 57.467 29.630 0.00 0.00 0.00 3.61
2416 2642 9.750125 GAACAGAAAGATCAACAAAAATTACCT 57.250 29.630 0.00 0.00 0.00 3.08
2541 3253 6.000219 CAGATAAGGGATTCCAAGGTATGTG 59.000 44.000 4.80 1.90 34.83 3.21
2611 3323 3.253188 ACACACAATCAGTATTGCACCAC 59.747 43.478 0.00 0.00 45.41 4.16
2617 3329 4.996758 TCCACTCACACACAATCAGTATTG 59.003 41.667 0.00 0.00 46.66 1.90
2618 3330 5.227569 TCCACTCACACACAATCAGTATT 57.772 39.130 0.00 0.00 0.00 1.89
2619 3331 4.890158 TCCACTCACACACAATCAGTAT 57.110 40.909 0.00 0.00 0.00 2.12
2620 3332 4.681074 TTCCACTCACACACAATCAGTA 57.319 40.909 0.00 0.00 0.00 2.74
2621 3333 3.558931 TTCCACTCACACACAATCAGT 57.441 42.857 0.00 0.00 0.00 3.41
2622 3334 3.438087 GGATTCCACTCACACACAATCAG 59.562 47.826 0.00 0.00 0.00 2.90
2625 3337 3.072915 TCTGGATTCCACTCACACACAAT 59.927 43.478 0.00 0.00 0.00 2.71
2626 3338 2.437651 TCTGGATTCCACTCACACACAA 59.562 45.455 0.00 0.00 0.00 3.33
2627 3339 2.037641 CTCTGGATTCCACTCACACACA 59.962 50.000 0.00 0.00 0.00 3.72
2628 3340 2.037772 ACTCTGGATTCCACTCACACAC 59.962 50.000 0.00 0.00 0.00 3.82
2629 3341 2.329267 ACTCTGGATTCCACTCACACA 58.671 47.619 0.00 0.00 0.00 3.72
2630 3342 3.409026 AACTCTGGATTCCACTCACAC 57.591 47.619 0.00 0.00 0.00 3.82
2631 3343 4.593206 AGTTAACTCTGGATTCCACTCACA 59.407 41.667 1.12 0.00 0.00 3.58
2632 3344 5.153950 AGTTAACTCTGGATTCCACTCAC 57.846 43.478 1.12 0.00 0.00 3.51
2633 3345 4.838423 TGAGTTAACTCTGGATTCCACTCA 59.162 41.667 30.47 13.18 43.25 3.41
2634 3346 5.407407 TGAGTTAACTCTGGATTCCACTC 57.593 43.478 30.47 5.85 43.25 3.51
2635 3347 5.308237 ACTTGAGTTAACTCTGGATTCCACT 59.692 40.000 30.47 7.92 43.25 4.00
2674 3386 4.550831 CGTATTCAGAAACGGCAAGCATAG 60.551 45.833 8.96 0.00 35.51 2.23
2676 3388 2.095853 CGTATTCAGAAACGGCAAGCAT 59.904 45.455 8.96 0.00 35.51 3.79
2678 3390 2.159467 CGTATTCAGAAACGGCAAGC 57.841 50.000 8.96 0.00 35.51 4.01
2684 3396 6.701432 AACTTAACTCCGTATTCAGAAACG 57.299 37.500 9.58 9.58 38.80 3.60
2685 3397 8.307921 AGAAACTTAACTCCGTATTCAGAAAC 57.692 34.615 0.00 0.00 0.00 2.78
2686 3398 7.601508 GGAGAAACTTAACTCCGTATTCAGAAA 59.398 37.037 0.00 0.00 42.25 2.52
2687 3399 7.095270 GGAGAAACTTAACTCCGTATTCAGAA 58.905 38.462 0.00 0.00 42.25 3.02
2688 3400 6.628185 GGAGAAACTTAACTCCGTATTCAGA 58.372 40.000 0.00 0.00 42.25 3.27
2689 3401 6.889019 GGAGAAACTTAACTCCGTATTCAG 57.111 41.667 0.00 0.00 42.25 3.02
2698 3410 5.346281 CGATGTGACAGGAGAAACTTAACTC 59.654 44.000 0.00 0.00 0.00 3.01
2699 3411 5.230942 CGATGTGACAGGAGAAACTTAACT 58.769 41.667 0.00 0.00 0.00 2.24
2700 3412 4.143094 GCGATGTGACAGGAGAAACTTAAC 60.143 45.833 0.00 0.00 0.00 2.01
2702 3414 3.258372 AGCGATGTGACAGGAGAAACTTA 59.742 43.478 0.00 0.00 0.00 2.24
2703 3415 2.037772 AGCGATGTGACAGGAGAAACTT 59.962 45.455 0.00 0.00 0.00 2.66
2704 3416 1.620819 AGCGATGTGACAGGAGAAACT 59.379 47.619 0.00 0.00 0.00 2.66
2705 3417 1.728971 CAGCGATGTGACAGGAGAAAC 59.271 52.381 0.00 0.00 0.00 2.78
2706 3418 1.344438 ACAGCGATGTGACAGGAGAAA 59.656 47.619 5.03 0.00 0.00 2.52
2707 3419 0.969149 ACAGCGATGTGACAGGAGAA 59.031 50.000 5.03 0.00 0.00 2.87
2708 3420 1.834188 TACAGCGATGTGACAGGAGA 58.166 50.000 18.14 0.00 0.00 3.71
2709 3421 2.654749 TTACAGCGATGTGACAGGAG 57.345 50.000 18.14 0.00 0.00 3.69
2710 3422 2.233676 ACATTACAGCGATGTGACAGGA 59.766 45.455 18.14 0.00 36.43 3.86
2711 3423 2.621338 ACATTACAGCGATGTGACAGG 58.379 47.619 18.14 4.57 36.43 4.00
2712 3424 3.243877 GCTACATTACAGCGATGTGACAG 59.756 47.826 18.14 7.44 38.17 3.51
2713 3425 3.186909 GCTACATTACAGCGATGTGACA 58.813 45.455 18.14 0.00 38.17 3.58
2714 3426 3.186909 TGCTACATTACAGCGATGTGAC 58.813 45.455 18.14 0.00 42.13 3.67
2715 3427 3.518634 TGCTACATTACAGCGATGTGA 57.481 42.857 18.14 9.08 42.13 3.58
2716 3428 4.150627 GGTATGCTACATTACAGCGATGTG 59.849 45.833 18.14 1.83 42.13 3.21
2717 3429 4.202212 TGGTATGCTACATTACAGCGATGT 60.202 41.667 12.53 12.53 42.13 3.06
2718 3430 4.150627 GTGGTATGCTACATTACAGCGATG 59.849 45.833 0.00 0.00 42.13 3.84
2719 3431 4.039245 AGTGGTATGCTACATTACAGCGAT 59.961 41.667 0.00 0.00 42.13 4.58
2720 3432 3.383505 AGTGGTATGCTACATTACAGCGA 59.616 43.478 0.00 0.00 42.13 4.93
2721 3433 3.717707 AGTGGTATGCTACATTACAGCG 58.282 45.455 0.00 0.00 42.13 5.18
2722 3434 5.597806 TGTAGTGGTATGCTACATTACAGC 58.402 41.667 0.00 0.00 42.45 4.40
2724 3436 6.569780 CACTGTAGTGGTATGCTACATTACA 58.430 40.000 4.10 0.37 45.06 2.41
2725 3437 7.010183 CAACACTGTAGTGGTATGCTACATTAC 59.990 40.741 15.74 0.00 45.58 1.89
2726 3438 7.039270 CAACACTGTAGTGGTATGCTACATTA 58.961 38.462 15.74 0.00 45.58 1.90
2727 3439 5.874810 CAACACTGTAGTGGTATGCTACATT 59.125 40.000 15.74 0.00 45.58 2.71
2728 3440 5.046591 ACAACACTGTAGTGGTATGCTACAT 60.047 40.000 15.74 0.00 45.58 2.29
2729 3441 4.282449 ACAACACTGTAGTGGTATGCTACA 59.718 41.667 15.74 5.27 45.58 2.74
2730 3442 4.817517 ACAACACTGTAGTGGTATGCTAC 58.182 43.478 15.74 0.00 45.58 3.58
2731 3443 5.477607 AACAACACTGTAGTGGTATGCTA 57.522 39.130 15.74 0.00 45.58 3.49
2732 3444 4.351874 AACAACACTGTAGTGGTATGCT 57.648 40.909 15.74 1.95 45.58 3.79
2733 3445 4.274950 ACAAACAACACTGTAGTGGTATGC 59.725 41.667 15.74 0.00 45.58 3.14
2734 3446 6.371809 AACAAACAACACTGTAGTGGTATG 57.628 37.500 15.74 12.99 45.58 2.39
2735 3447 7.121463 TCAAAACAAACAACACTGTAGTGGTAT 59.879 33.333 15.74 0.00 45.58 2.73
2736 3448 6.430308 TCAAAACAAACAACACTGTAGTGGTA 59.570 34.615 15.74 0.00 45.58 3.25
2740 3452 6.569179 ACTCAAAACAAACAACACTGTAGT 57.431 33.333 0.00 0.00 33.45 2.73
2741 3453 7.867445 AAACTCAAAACAAACAACACTGTAG 57.133 32.000 0.00 0.00 33.45 2.74
2742 3454 7.921214 TCAAAACTCAAAACAAACAACACTGTA 59.079 29.630 0.00 0.00 33.45 2.74
2743 3455 6.758886 TCAAAACTCAAAACAAACAACACTGT 59.241 30.769 0.00 0.00 37.39 3.55
2744 3456 7.171447 TCAAAACTCAAAACAAACAACACTG 57.829 32.000 0.00 0.00 0.00 3.66
2745 3457 7.961325 ATCAAAACTCAAAACAAACAACACT 57.039 28.000 0.00 0.00 0.00 3.55
2746 3458 9.444534 AAAATCAAAACTCAAAACAAACAACAC 57.555 25.926 0.00 0.00 0.00 3.32
2750 3462 7.869800 AGCAAAATCAAAACTCAAAACAAACA 58.130 26.923 0.00 0.00 0.00 2.83
2755 3467 6.034470 TCGTGAGCAAAATCAAAACTCAAAAC 59.966 34.615 0.00 0.00 38.97 2.43
2760 3472 4.222114 CCTCGTGAGCAAAATCAAAACTC 58.778 43.478 0.00 0.00 0.00 3.01
2761 3473 3.632145 ACCTCGTGAGCAAAATCAAAACT 59.368 39.130 0.00 0.00 0.00 2.66
2764 3476 3.210227 TCACCTCGTGAGCAAAATCAAA 58.790 40.909 0.00 0.00 37.67 2.69
2766 3478 2.542020 TCACCTCGTGAGCAAAATCA 57.458 45.000 0.00 0.00 37.67 2.57
2767 3479 4.425577 AAATCACCTCGTGAGCAAAATC 57.574 40.909 0.55 0.00 46.04 2.17
2768 3480 4.853924 AAAATCACCTCGTGAGCAAAAT 57.146 36.364 0.55 0.00 46.04 1.82
2773 3485 2.742053 TGCTAAAAATCACCTCGTGAGC 59.258 45.455 0.55 0.00 46.04 4.26
2774 3486 3.997021 AGTGCTAAAAATCACCTCGTGAG 59.003 43.478 0.55 0.00 46.04 3.51
2777 3489 4.002906 TCAGTGCTAAAAATCACCTCGT 57.997 40.909 0.00 0.00 33.90 4.18
2778 3490 5.551760 ATTCAGTGCTAAAAATCACCTCG 57.448 39.130 0.00 0.00 33.90 4.63
2779 3491 6.071952 TGGAATTCAGTGCTAAAAATCACCTC 60.072 38.462 7.93 0.00 33.90 3.85
2780 3492 5.774690 TGGAATTCAGTGCTAAAAATCACCT 59.225 36.000 7.93 0.00 33.90 4.00
2781 3493 6.024552 TGGAATTCAGTGCTAAAAATCACC 57.975 37.500 7.93 0.00 33.90 4.02
2782 3494 6.753744 GGATGGAATTCAGTGCTAAAAATCAC 59.246 38.462 7.93 0.00 0.00 3.06
2783 3495 6.436847 TGGATGGAATTCAGTGCTAAAAATCA 59.563 34.615 7.93 0.00 0.00 2.57
2784 3496 6.866480 TGGATGGAATTCAGTGCTAAAAATC 58.134 36.000 7.93 0.00 0.00 2.17
2785 3497 6.855763 TGGATGGAATTCAGTGCTAAAAAT 57.144 33.333 7.93 0.00 0.00 1.82
2786 3498 6.632909 CATGGATGGAATTCAGTGCTAAAAA 58.367 36.000 7.93 0.00 33.46 1.94
2787 3499 5.394443 GCATGGATGGAATTCAGTGCTAAAA 60.394 40.000 7.93 0.00 33.46 1.52
2790 3502 3.117776 AGCATGGATGGAATTCAGTGCTA 60.118 43.478 7.93 0.00 41.61 3.49
2791 3503 2.029623 GCATGGATGGAATTCAGTGCT 58.970 47.619 7.93 0.00 33.46 4.40
2792 3504 2.029623 AGCATGGATGGAATTCAGTGC 58.970 47.619 7.93 7.63 33.46 4.40
2793 3505 4.321008 GCATAGCATGGATGGAATTCAGTG 60.321 45.833 7.93 0.00 33.46 3.66
2794 3506 3.825014 GCATAGCATGGATGGAATTCAGT 59.175 43.478 7.93 0.00 33.46 3.41
2795 3507 4.079970 AGCATAGCATGGATGGAATTCAG 58.920 43.478 7.93 0.00 33.46 3.02
2796 3508 3.824443 CAGCATAGCATGGATGGAATTCA 59.176 43.478 7.93 0.00 35.33 2.57
2797 3509 3.825014 ACAGCATAGCATGGATGGAATTC 59.175 43.478 0.00 0.00 0.00 2.17
2798 3510 3.825014 GACAGCATAGCATGGATGGAATT 59.175 43.478 0.00 0.00 0.00 2.17
2799 3511 3.181437 TGACAGCATAGCATGGATGGAAT 60.181 43.478 0.00 0.00 0.00 3.01
2800 3512 2.173143 TGACAGCATAGCATGGATGGAA 59.827 45.455 0.00 0.00 0.00 3.53
2802 3514 2.152016 CTGACAGCATAGCATGGATGG 58.848 52.381 0.00 0.00 0.00 3.51
2803 3515 2.847441 ACTGACAGCATAGCATGGATG 58.153 47.619 1.25 0.00 0.00 3.51
2806 3518 3.011818 TGAAACTGACAGCATAGCATGG 58.988 45.455 1.25 0.00 0.00 3.66
2807 3519 4.690184 TTGAAACTGACAGCATAGCATG 57.310 40.909 1.25 0.00 0.00 4.06
2808 3520 6.118170 AGTATTGAAACTGACAGCATAGCAT 58.882 36.000 1.25 0.00 0.00 3.79
2809 3521 5.491070 AGTATTGAAACTGACAGCATAGCA 58.509 37.500 1.25 0.00 0.00 3.49
2842 3554 0.319728 GCAGTGCCTGTCTGAAGAGA 59.680 55.000 2.85 0.00 35.20 3.10
2843 3555 0.034476 TGCAGTGCCTGTCTGAAGAG 59.966 55.000 13.72 0.00 35.20 2.85
2844 3556 0.689055 ATGCAGTGCCTGTCTGAAGA 59.311 50.000 13.72 0.00 35.20 2.87
2845 3557 1.199327 CAATGCAGTGCCTGTCTGAAG 59.801 52.381 13.72 0.00 35.20 3.02
2846 3558 1.241165 CAATGCAGTGCCTGTCTGAA 58.759 50.000 13.72 0.00 35.20 3.02
2847 3559 0.109153 ACAATGCAGTGCCTGTCTGA 59.891 50.000 15.18 0.00 35.20 3.27
2848 3560 0.956633 AACAATGCAGTGCCTGTCTG 59.043 50.000 15.18 8.44 33.43 3.51
2849 3561 2.430465 CTAACAATGCAGTGCCTGTCT 58.570 47.619 15.18 11.54 33.43 3.41
2850 3562 1.135575 GCTAACAATGCAGTGCCTGTC 60.136 52.381 15.18 5.07 33.43 3.51
2852 3564 0.179181 CGCTAACAATGCAGTGCCTG 60.179 55.000 15.18 12.51 34.12 4.85
2854 3566 0.734889 ATCGCTAACAATGCAGTGCC 59.265 50.000 15.18 0.00 0.00 5.01
2855 3567 3.002656 ACATATCGCTAACAATGCAGTGC 59.997 43.478 15.18 8.58 0.00 4.40
2856 3568 4.801147 ACATATCGCTAACAATGCAGTG 57.199 40.909 13.51 13.51 0.00 3.66
2861 3573 7.954248 GCTGAGAAATACATATCGCTAACAATG 59.046 37.037 0.00 0.00 0.00 2.82
2862 3574 7.875041 AGCTGAGAAATACATATCGCTAACAAT 59.125 33.333 0.00 0.00 0.00 2.71
2863 3575 7.210174 AGCTGAGAAATACATATCGCTAACAA 58.790 34.615 0.00 0.00 0.00 2.83
2865 3577 6.863645 TGAGCTGAGAAATACATATCGCTAAC 59.136 38.462 0.00 0.00 0.00 2.34
2866 3578 6.981722 TGAGCTGAGAAATACATATCGCTAA 58.018 36.000 0.00 0.00 0.00 3.09
2867 3579 6.575162 TGAGCTGAGAAATACATATCGCTA 57.425 37.500 0.00 0.00 0.00 4.26
2868 3580 5.459536 TGAGCTGAGAAATACATATCGCT 57.540 39.130 0.00 0.00 0.00 4.93
2869 3581 7.254137 TCTATGAGCTGAGAAATACATATCGC 58.746 38.462 0.00 0.00 0.00 4.58
2870 3582 9.800433 AATCTATGAGCTGAGAAATACATATCG 57.200 33.333 0.00 0.00 0.00 2.92
2874 3586 9.491675 CAGAAATCTATGAGCTGAGAAATACAT 57.508 33.333 0.00 0.00 0.00 2.29
2875 3587 8.699130 TCAGAAATCTATGAGCTGAGAAATACA 58.301 33.333 0.00 0.00 32.36 2.29
2876 3588 9.539825 TTCAGAAATCTATGAGCTGAGAAATAC 57.460 33.333 0.00 0.00 36.99 1.89
2878 3590 9.058174 CATTCAGAAATCTATGAGCTGAGAAAT 57.942 33.333 0.00 0.00 36.99 2.17
2879 3591 7.012138 GCATTCAGAAATCTATGAGCTGAGAAA 59.988 37.037 0.00 0.00 36.99 2.52
2880 3592 6.482641 GCATTCAGAAATCTATGAGCTGAGAA 59.517 38.462 0.00 0.00 36.99 2.87
2881 3593 5.990386 GCATTCAGAAATCTATGAGCTGAGA 59.010 40.000 0.00 0.00 36.99 3.27
2882 3594 5.758784 TGCATTCAGAAATCTATGAGCTGAG 59.241 40.000 0.00 0.00 36.99 3.35
2883 3595 5.677567 TGCATTCAGAAATCTATGAGCTGA 58.322 37.500 0.00 0.00 34.11 4.26
2884 3596 5.758784 TCTGCATTCAGAAATCTATGAGCTG 59.241 40.000 0.00 0.00 45.69 4.24
2885 3597 5.926663 TCTGCATTCAGAAATCTATGAGCT 58.073 37.500 0.00 0.00 45.69 4.09
2921 3633 9.656040 TCGATATACACTGCCTTTAGTTTAAAA 57.344 29.630 0.00 0.00 0.00 1.52
2924 3636 7.069085 ACCTCGATATACACTGCCTTTAGTTTA 59.931 37.037 0.00 0.00 0.00 2.01
2927 3639 4.894114 ACCTCGATATACACTGCCTTTAGT 59.106 41.667 0.00 0.00 0.00 2.24
2928 3640 5.009710 TCACCTCGATATACACTGCCTTTAG 59.990 44.000 0.00 0.00 0.00 1.85
2929 3641 4.891168 TCACCTCGATATACACTGCCTTTA 59.109 41.667 0.00 0.00 0.00 1.85
2960 3678 5.220739 CGGAGCTGATTCTGAATTTTAGTGG 60.221 44.000 4.11 0.00 0.00 4.00
2961 3679 5.582269 TCGGAGCTGATTCTGAATTTTAGTG 59.418 40.000 4.11 0.00 29.71 2.74
2965 3683 6.825721 ACTAATCGGAGCTGATTCTGAATTTT 59.174 34.615 7.76 0.00 39.27 1.82
2977 3695 2.358267 ACCGTAGAACTAATCGGAGCTG 59.642 50.000 14.65 0.00 44.86 4.24
2979 3697 2.543238 CCACCGTAGAACTAATCGGAGC 60.543 54.545 14.65 0.00 44.86 4.70
2986 3704 5.769662 TCAGAAACTACCACCGTAGAACTAA 59.230 40.000 4.36 0.00 44.18 2.24
2990 3708 5.733620 ATTCAGAAACTACCACCGTAGAA 57.266 39.130 4.36 0.00 44.18 2.10
2991 3709 5.948162 AGTATTCAGAAACTACCACCGTAGA 59.052 40.000 4.36 0.00 44.18 2.59
2995 3713 5.068234 TCAGTATTCAGAAACTACCACCG 57.932 43.478 0.00 0.00 0.00 4.94
3033 3767 4.949104 CAGAAACAACACGAAAATTTTGCG 59.051 37.500 8.47 13.44 0.00 4.85
3034 3768 5.853081 ACAGAAACAACACGAAAATTTTGC 58.147 33.333 8.47 0.00 0.00 3.68
3039 3773 6.616947 TGAAGAACAGAAACAACACGAAAAT 58.383 32.000 0.00 0.00 0.00 1.82
3110 3844 1.674519 CGTGCCAGCACCAGTATGTAA 60.675 52.381 16.69 0.00 43.49 2.41
3112 3846 1.375908 CGTGCCAGCACCAGTATGT 60.376 57.895 16.69 0.00 43.49 2.29
3113 3847 2.108514 CCGTGCCAGCACCAGTATG 61.109 63.158 16.69 1.98 43.49 2.39
3114 3848 1.261938 TACCGTGCCAGCACCAGTAT 61.262 55.000 16.69 1.38 43.49 2.12
3115 3849 1.909287 TACCGTGCCAGCACCAGTA 60.909 57.895 16.69 14.84 43.49 2.74
3116 3850 3.238497 TACCGTGCCAGCACCAGT 61.238 61.111 16.69 15.76 43.49 4.00
3117 3851 2.742372 GTACCGTGCCAGCACCAG 60.742 66.667 16.69 10.95 43.49 4.00
3118 3852 2.404566 AATGTACCGTGCCAGCACCA 62.405 55.000 16.69 9.24 43.49 4.17
3119 3853 0.391927 TAATGTACCGTGCCAGCACC 60.392 55.000 16.69 3.71 43.49 5.01
3133 3867 1.354368 CCTTGTGTGACCCCCTAATGT 59.646 52.381 0.00 0.00 0.00 2.71
3153 3887 8.787852 CAAAGTATAGATAAGGGATTTCAAGGC 58.212 37.037 0.00 0.00 0.00 4.35
3188 3924 3.278778 TGTTCTAACAGGGACACGTCCA 61.279 50.000 17.72 0.00 41.87 4.02
3189 3925 1.342174 TGTTCTAACAGGGACACGTCC 59.658 52.381 7.75 7.75 40.50 4.79
3194 3930 5.185454 CAATGCTATGTTCTAACAGGGACA 58.815 41.667 1.62 0.00 43.04 4.02
3195 3931 5.186198 ACAATGCTATGTTCTAACAGGGAC 58.814 41.667 1.62 0.00 43.04 4.46
3215 3951 4.021544 AGTTCAAAGGCACTGACAAAACAA 60.022 37.500 0.00 0.00 40.86 2.83
3216 3952 3.509575 AGTTCAAAGGCACTGACAAAACA 59.490 39.130 0.00 0.00 40.86 2.83
3217 3953 3.859386 CAGTTCAAAGGCACTGACAAAAC 59.141 43.478 0.00 0.00 42.74 2.43
3218 3954 3.509575 ACAGTTCAAAGGCACTGACAAAA 59.490 39.130 8.70 0.00 42.74 2.44
3219 3955 3.088532 ACAGTTCAAAGGCACTGACAAA 58.911 40.909 8.70 0.00 42.74 2.83
3220 3956 2.722094 ACAGTTCAAAGGCACTGACAA 58.278 42.857 8.70 0.00 42.74 3.18
3221 3957 2.418368 ACAGTTCAAAGGCACTGACA 57.582 45.000 8.70 0.00 42.74 3.58
3222 3958 2.423538 ACAACAGTTCAAAGGCACTGAC 59.576 45.455 8.70 0.00 42.74 3.51
3223 3959 2.423185 CACAACAGTTCAAAGGCACTGA 59.577 45.455 8.70 0.00 42.74 3.41
3224 3960 2.801063 CACAACAGTTCAAAGGCACTG 58.199 47.619 0.80 0.80 45.15 3.66
3226 3962 1.559831 GCACAACAGTTCAAAGGCAC 58.440 50.000 0.00 0.00 0.00 5.01
3227 3963 0.459489 GGCACAACAGTTCAAAGGCA 59.541 50.000 0.00 0.00 0.00 4.75
3228 3964 0.459489 TGGCACAACAGTTCAAAGGC 59.541 50.000 0.00 0.00 31.92 4.35
3242 3978 3.598019 ATTCACAAATCACCATGGCAC 57.402 42.857 13.04 0.00 0.00 5.01
3243 3979 4.380339 CGTTATTCACAAATCACCATGGCA 60.380 41.667 13.04 0.00 0.00 4.92
3244 3980 4.104776 CGTTATTCACAAATCACCATGGC 58.895 43.478 13.04 0.00 0.00 4.40
3245 3981 5.559427 TCGTTATTCACAAATCACCATGG 57.441 39.130 11.19 11.19 0.00 3.66
3246 3982 7.865875 TTTTCGTTATTCACAAATCACCATG 57.134 32.000 0.00 0.00 0.00 3.66
3268 4004 9.952188 GCTAACTTGAGTTATTCTGAACTTTTT 57.048 29.630 4.22 0.00 39.79 1.94
3269 4005 9.120538 TGCTAACTTGAGTTATTCTGAACTTTT 57.879 29.630 4.22 0.00 39.79 2.27
3270 4006 8.677148 TGCTAACTTGAGTTATTCTGAACTTT 57.323 30.769 4.22 0.00 39.79 2.66
3271 4007 8.725148 CATGCTAACTTGAGTTATTCTGAACTT 58.275 33.333 4.22 0.00 39.79 2.66
3272 4008 7.880195 ACATGCTAACTTGAGTTATTCTGAACT 59.120 33.333 4.22 0.00 42.42 3.01
3273 4009 7.959651 CACATGCTAACTTGAGTTATTCTGAAC 59.040 37.037 4.22 0.00 39.49 3.18
3274 4010 7.361201 GCACATGCTAACTTGAGTTATTCTGAA 60.361 37.037 4.22 0.00 39.49 3.02
3275 4011 6.092670 GCACATGCTAACTTGAGTTATTCTGA 59.907 38.462 4.22 0.00 39.49 3.27
3276 4012 6.253746 GCACATGCTAACTTGAGTTATTCTG 58.746 40.000 4.22 5.14 39.49 3.02
3277 4013 5.063944 CGCACATGCTAACTTGAGTTATTCT 59.936 40.000 4.22 0.00 39.49 2.40
3278 4014 5.063438 TCGCACATGCTAACTTGAGTTATTC 59.937 40.000 4.22 1.53 39.49 1.75
3279 4015 4.935205 TCGCACATGCTAACTTGAGTTATT 59.065 37.500 4.22 0.00 39.49 1.40
3280 4016 4.503910 TCGCACATGCTAACTTGAGTTAT 58.496 39.130 4.22 0.00 39.49 1.89
3281 4017 3.920446 TCGCACATGCTAACTTGAGTTA 58.080 40.909 1.82 3.78 38.63 2.24
3282 4018 2.738846 CTCGCACATGCTAACTTGAGTT 59.261 45.455 1.82 1.60 39.32 3.01
3283 4019 2.289072 ACTCGCACATGCTAACTTGAGT 60.289 45.455 1.82 3.45 39.32 3.41
3284 4020 2.093310 CACTCGCACATGCTAACTTGAG 59.907 50.000 1.82 2.84 39.32 3.02
3285 4021 2.068519 CACTCGCACATGCTAACTTGA 58.931 47.619 1.82 0.00 39.32 3.02
3286 4022 1.464687 GCACTCGCACATGCTAACTTG 60.465 52.381 1.82 0.00 38.84 3.16
3287 4023 0.798776 GCACTCGCACATGCTAACTT 59.201 50.000 1.82 0.00 38.84 2.66
3288 4024 1.021390 GGCACTCGCACATGCTAACT 61.021 55.000 1.82 0.00 41.74 2.24
3289 4025 1.021390 AGGCACTCGCACATGCTAAC 61.021 55.000 1.82 0.00 41.74 2.34
3290 4026 1.020861 CAGGCACTCGCACATGCTAA 61.021 55.000 1.82 0.00 41.74 3.09
3291 4027 1.448365 CAGGCACTCGCACATGCTA 60.448 57.895 1.82 0.00 41.74 3.49
3292 4028 2.745100 CAGGCACTCGCACATGCT 60.745 61.111 1.82 0.00 41.74 3.79
3293 4029 4.471726 GCAGGCACTCGCACATGC 62.472 66.667 0.00 0.00 41.24 4.06
3294 4030 4.156622 CGCAGGCACTCGCACATG 62.157 66.667 0.00 0.00 41.24 3.21
3295 4031 2.296814 TATCGCAGGCACTCGCACAT 62.297 55.000 0.00 0.00 41.24 3.21
3296 4032 3.000693 TATCGCAGGCACTCGCACA 62.001 57.895 0.00 0.00 41.24 4.57
3297 4033 2.202743 TATCGCAGGCACTCGCAC 60.203 61.111 0.00 0.00 41.24 5.34
3298 4034 2.202743 GTATCGCAGGCACTCGCA 60.203 61.111 0.00 0.00 41.24 5.10
3299 4035 1.946650 GAGTATCGCAGGCACTCGC 60.947 63.158 0.00 0.00 34.60 5.03
3300 4036 0.317436 GAGAGTATCGCAGGCACTCG 60.317 60.000 5.06 0.00 41.39 4.18
3301 4037 0.741326 TGAGAGTATCGCAGGCACTC 59.259 55.000 2.92 2.92 40.97 3.51
3302 4038 2.887790 TGAGAGTATCGCAGGCACT 58.112 52.632 0.00 0.00 40.97 4.40
3314 4050 1.692519 ACTAAACCGCAACCTGAGAGT 59.307 47.619 0.00 0.00 0.00 3.24
3359 4095 4.276926 AGGCAGAGTTTAGAAAACTGCAAG 59.723 41.667 23.81 9.07 44.57 4.01
3360 4096 4.207165 AGGCAGAGTTTAGAAAACTGCAA 58.793 39.130 23.81 0.00 44.57 4.08
3361 4097 3.815401 GAGGCAGAGTTTAGAAAACTGCA 59.185 43.478 23.81 0.00 44.57 4.41
3362 4098 3.815401 TGAGGCAGAGTTTAGAAAACTGC 59.185 43.478 18.74 18.74 43.36 4.40
3363 4099 5.300752 TCTGAGGCAGAGTTTAGAAAACTG 58.699 41.667 9.63 6.75 35.39 3.16
3364 4100 5.552870 TCTGAGGCAGAGTTTAGAAAACT 57.447 39.130 4.77 4.77 35.39 2.66
3365 4101 6.205658 ACATTCTGAGGCAGAGTTTAGAAAAC 59.794 38.462 0.00 0.00 41.75 2.43
3366 4102 6.299141 ACATTCTGAGGCAGAGTTTAGAAAA 58.701 36.000 0.00 0.00 41.75 2.29
3367 4103 5.869579 ACATTCTGAGGCAGAGTTTAGAAA 58.130 37.500 0.00 0.00 41.75 2.52
3368 4104 5.489792 ACATTCTGAGGCAGAGTTTAGAA 57.510 39.130 0.00 0.00 41.75 2.10
3369 4105 5.489792 AACATTCTGAGGCAGAGTTTAGA 57.510 39.130 0.00 0.00 41.75 2.10
3370 4106 6.166279 TGTAACATTCTGAGGCAGAGTTTAG 58.834 40.000 7.18 0.00 41.75 1.85
3371 4107 6.109156 TGTAACATTCTGAGGCAGAGTTTA 57.891 37.500 7.18 1.07 41.75 2.01
3372 4108 4.973168 TGTAACATTCTGAGGCAGAGTTT 58.027 39.130 7.18 1.80 41.75 2.66
3373 4109 4.623932 TGTAACATTCTGAGGCAGAGTT 57.376 40.909 0.00 0.00 41.75 3.01
3374 4110 4.383552 GGATGTAACATTCTGAGGCAGAGT 60.384 45.833 0.00 0.00 41.75 3.24
3375 4111 4.125703 GGATGTAACATTCTGAGGCAGAG 58.874 47.826 0.00 0.00 41.75 3.35
3376 4112 3.519107 TGGATGTAACATTCTGAGGCAGA 59.481 43.478 0.00 0.00 38.87 4.26
3377 4113 3.877559 TGGATGTAACATTCTGAGGCAG 58.122 45.455 0.00 0.00 0.00 4.85
3378 4114 3.998913 TGGATGTAACATTCTGAGGCA 57.001 42.857 0.00 0.00 0.00 4.75
3379 4115 5.841957 AAATGGATGTAACATTCTGAGGC 57.158 39.130 0.00 0.00 37.55 4.70
3380 4116 6.968904 CGAAAAATGGATGTAACATTCTGAGG 59.031 38.462 0.00 0.00 37.55 3.86
3381 4117 7.693951 GTCGAAAAATGGATGTAACATTCTGAG 59.306 37.037 0.00 0.00 37.55 3.35
3382 4118 7.390440 AGTCGAAAAATGGATGTAACATTCTGA 59.610 33.333 0.00 0.00 37.55 3.27
3383 4119 7.530010 AGTCGAAAAATGGATGTAACATTCTG 58.470 34.615 0.00 0.00 37.55 3.02
3384 4120 7.390440 TGAGTCGAAAAATGGATGTAACATTCT 59.610 33.333 0.00 0.00 37.55 2.40
3385 4121 7.481798 GTGAGTCGAAAAATGGATGTAACATTC 59.518 37.037 0.00 0.00 37.55 2.67
3386 4122 7.174946 AGTGAGTCGAAAAATGGATGTAACATT 59.825 33.333 0.00 0.00 40.07 2.71
3387 4123 6.655003 AGTGAGTCGAAAAATGGATGTAACAT 59.345 34.615 0.00 0.00 0.00 2.71
3388 4124 5.995282 AGTGAGTCGAAAAATGGATGTAACA 59.005 36.000 0.00 0.00 0.00 2.41
3389 4125 6.369065 AGAGTGAGTCGAAAAATGGATGTAAC 59.631 38.462 0.00 0.00 0.00 2.50
3390 4126 6.464222 AGAGTGAGTCGAAAAATGGATGTAA 58.536 36.000 0.00 0.00 0.00 2.41
3391 4127 6.037786 AGAGTGAGTCGAAAAATGGATGTA 57.962 37.500 0.00 0.00 0.00 2.29
3392 4128 4.899502 AGAGTGAGTCGAAAAATGGATGT 58.100 39.130 0.00 0.00 0.00 3.06
3393 4129 5.869753 AAGAGTGAGTCGAAAAATGGATG 57.130 39.130 0.00 0.00 0.00 3.51
3394 4130 6.884280 AAAAGAGTGAGTCGAAAAATGGAT 57.116 33.333 0.00 0.00 0.00 3.41
3395 4131 6.693315 AAAAAGAGTGAGTCGAAAAATGGA 57.307 33.333 0.00 0.00 0.00 3.41
3424 4160 8.806146 AGAAATAACACCAAAATGTGCTAATCT 58.194 29.630 0.00 0.00 39.93 2.40
3425 4161 8.863049 CAGAAATAACACCAAAATGTGCTAATC 58.137 33.333 0.00 0.00 39.93 1.75
3426 4162 8.367156 ACAGAAATAACACCAAAATGTGCTAAT 58.633 29.630 0.00 0.00 39.93 1.73
3427 4163 7.721402 ACAGAAATAACACCAAAATGTGCTAA 58.279 30.769 0.00 0.00 39.93 3.09
3428 4164 7.283625 ACAGAAATAACACCAAAATGTGCTA 57.716 32.000 0.00 0.00 39.93 3.49
3429 4165 6.160576 ACAGAAATAACACCAAAATGTGCT 57.839 33.333 0.00 0.00 39.93 4.40
3430 4166 6.701400 AGAACAGAAATAACACCAAAATGTGC 59.299 34.615 0.00 0.00 39.93 4.57
3431 4167 8.647143 AAGAACAGAAATAACACCAAAATGTG 57.353 30.769 0.00 0.00 42.05 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.