Multiple sequence alignment - TraesCS3A01G034200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G034200 chr3A 100.000 2711 0 0 1 2711 19356594 19359304 0.000000e+00 5007
1 TraesCS3A01G034200 chr3A 88.723 1206 116 9 544 1739 19486559 19485364 0.000000e+00 1456
2 TraesCS3A01G034200 chr3A 76.690 1021 169 38 736 1721 25959775 25958789 1.120000e-138 503
3 TraesCS3A01G034200 chr3A 77.004 948 155 34 748 1653 19286263 19287189 4.060000e-133 484
4 TraesCS3A01G034200 chr3A 75.286 437 89 15 1013 1441 25952256 25951831 9.910000e-45 191
5 TraesCS3A01G034200 chr3A 72.533 375 77 15 1085 1443 25948898 25948534 6.180000e-17 99
6 TraesCS3A01G034200 chr3D 93.629 2229 126 14 494 2711 17533345 17531122 0.000000e+00 3315
7 TraesCS3A01G034200 chr3D 87.752 1143 109 16 605 1739 17361604 17362723 0.000000e+00 1306
8 TraesCS3A01G034200 chr3D 81.373 714 107 13 959 1656 17666474 17665771 2.360000e-155 558
9 TraesCS3A01G034200 chr3D 84.990 513 48 14 475 987 17527730 17527247 6.740000e-136 494
10 TraesCS3A01G034200 chr3D 79.266 463 74 10 959 1416 11335676 11336121 1.220000e-78 303
11 TraesCS3A01G034200 chr3D 76.142 394 74 15 1060 1443 11339774 11340157 3.560000e-44 189
12 TraesCS3A01G034200 chr3B 83.608 1092 139 19 673 1739 24933008 24934084 0.000000e+00 989
13 TraesCS3A01G034200 chr3B 84.830 646 76 8 1013 1654 30363602 30364229 4.930000e-177 630
14 TraesCS3A01G034200 chr3B 82.972 646 88 10 1013 1654 29976626 29977253 5.070000e-157 564
15 TraesCS3A01G034200 chr3B 85.653 467 57 2 1189 1654 29981199 29981656 1.460000e-132 483
16 TraesCS3A01G034200 chr3B 93.311 299 19 1 182 480 655686698 655686995 8.910000e-120 440
17 TraesCS3A01G034200 chr3B 82.639 144 25 0 1065 1208 29530301 29530158 7.880000e-26 128
18 TraesCS3A01G034200 chr2A 95.667 300 13 0 182 481 74783292 74782993 1.460000e-132 483
19 TraesCS3A01G034200 chr2A 94.576 295 16 0 184 478 530672227 530671933 8.850000e-125 457
20 TraesCS3A01G034200 chr2A 86.312 263 34 2 1872 2133 69311217 69310956 4.420000e-73 285
21 TraesCS3A01G034200 chr2B 93.980 299 18 0 182 480 43019153 43019451 1.140000e-123 453
22 TraesCS3A01G034200 chr2B 90.040 251 23 2 1884 2133 45729789 45729540 9.360000e-85 324
23 TraesCS3A01G034200 chr2B 87.552 241 29 1 1884 2123 438743931 438744171 7.390000e-71 278
24 TraesCS3A01G034200 chr7A 93.115 305 13 5 181 480 706690645 706690344 8.910000e-120 440
25 TraesCS3A01G034200 chr7A 88.136 295 34 1 184 478 115741853 115742146 1.540000e-92 350
26 TraesCS3A01G034200 chr5B 91.973 299 24 0 182 480 421543351 421543053 1.160000e-113 420
27 TraesCS3A01G034200 chr4B 91.391 302 25 1 181 482 273957592 273957892 1.940000e-111 412
28 TraesCS3A01G034200 chr4B 86.000 250 33 2 1873 2121 467460502 467460750 1.600000e-67 267
29 TraesCS3A01G034200 chr1A 88.629 299 34 0 182 480 510397019 510396721 5.520000e-97 364
30 TraesCS3A01G034200 chr7D 86.400 250 33 1 1884 2132 194080964 194080715 3.440000e-69 272
31 TraesCS3A01G034200 chr7B 86.400 250 31 3 1885 2133 157803224 157802977 1.240000e-68 270
32 TraesCS3A01G034200 chr4A 86.454 251 24 7 1884 2133 352481764 352482005 1.600000e-67 267
33 TraesCS3A01G034200 chr4D 85.714 252 33 3 1884 2134 380281969 380282218 2.070000e-66 263


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G034200 chr3A 19356594 19359304 2710 False 5007.0 5007 100.0000 1 2711 1 chr3A.!!$F2 2710
1 TraesCS3A01G034200 chr3A 19485364 19486559 1195 True 1456.0 1456 88.7230 544 1739 1 chr3A.!!$R1 1195
2 TraesCS3A01G034200 chr3A 25958789 25959775 986 True 503.0 503 76.6900 736 1721 1 chr3A.!!$R2 985
3 TraesCS3A01G034200 chr3A 19286263 19287189 926 False 484.0 484 77.0040 748 1653 1 chr3A.!!$F1 905
4 TraesCS3A01G034200 chr3D 17527247 17533345 6098 True 1904.5 3315 89.3095 475 2711 2 chr3D.!!$R2 2236
5 TraesCS3A01G034200 chr3D 17361604 17362723 1119 False 1306.0 1306 87.7520 605 1739 1 chr3D.!!$F1 1134
6 TraesCS3A01G034200 chr3D 17665771 17666474 703 True 558.0 558 81.3730 959 1656 1 chr3D.!!$R1 697
7 TraesCS3A01G034200 chr3D 11335676 11340157 4481 False 246.0 303 77.7040 959 1443 2 chr3D.!!$F2 484
8 TraesCS3A01G034200 chr3B 24933008 24934084 1076 False 989.0 989 83.6080 673 1739 1 chr3B.!!$F1 1066
9 TraesCS3A01G034200 chr3B 30363602 30364229 627 False 630.0 630 84.8300 1013 1654 1 chr3B.!!$F2 641
10 TraesCS3A01G034200 chr3B 29976626 29981656 5030 False 523.5 564 84.3125 1013 1654 2 chr3B.!!$F4 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 341 0.171231 GCAAGCCCGTCCATTTCTTC 59.829 55.0 0.0 0.0 0.0 2.87 F
439 440 0.319555 GCTGCTGACGTGGACACTTA 60.320 55.0 0.0 0.0 0.0 2.24 F
970 1017 0.669077 CCTCTCATACGTCTTCCCCG 59.331 60.0 0.0 0.0 0.0 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1224 1281 0.827368 ATCCAGAGCTCCGGAGAAAC 59.173 55.0 35.69 22.56 33.97 2.78 R
1482 2772 0.859788 CGCGAACAAACACGTTGCTT 60.860 50.0 0.00 0.00 41.31 3.91 R
2320 9556 1.178534 AAGGCGAACATGGGTTGTGG 61.179 55.0 0.00 0.00 38.99 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.687166 ACAAACCTATCCCGATACAAGAA 57.313 39.130 0.00 0.00 0.00 2.52
24 25 6.248569 ACAAACCTATCCCGATACAAGAAT 57.751 37.500 0.00 0.00 0.00 2.40
25 26 6.289064 ACAAACCTATCCCGATACAAGAATC 58.711 40.000 0.00 0.00 0.00 2.52
26 27 5.485209 AACCTATCCCGATACAAGAATCC 57.515 43.478 0.00 0.00 0.00 3.01
27 28 4.489737 ACCTATCCCGATACAAGAATCCA 58.510 43.478 0.00 0.00 0.00 3.41
28 29 4.283722 ACCTATCCCGATACAAGAATCCAC 59.716 45.833 0.00 0.00 0.00 4.02
29 30 2.882927 TCCCGATACAAGAATCCACG 57.117 50.000 0.00 0.00 0.00 4.94
30 31 2.380941 TCCCGATACAAGAATCCACGA 58.619 47.619 0.00 0.00 0.00 4.35
31 32 2.761767 TCCCGATACAAGAATCCACGAA 59.238 45.455 0.00 0.00 0.00 3.85
32 33 2.864343 CCCGATACAAGAATCCACGAAC 59.136 50.000 0.00 0.00 0.00 3.95
33 34 3.517602 CCGATACAAGAATCCACGAACA 58.482 45.455 0.00 0.00 0.00 3.18
34 35 3.930229 CCGATACAAGAATCCACGAACAA 59.070 43.478 0.00 0.00 0.00 2.83
35 36 4.032900 CCGATACAAGAATCCACGAACAAG 59.967 45.833 0.00 0.00 0.00 3.16
36 37 4.862574 CGATACAAGAATCCACGAACAAGA 59.137 41.667 0.00 0.00 0.00 3.02
37 38 5.347635 CGATACAAGAATCCACGAACAAGAA 59.652 40.000 0.00 0.00 0.00 2.52
38 39 6.454318 CGATACAAGAATCCACGAACAAGAAG 60.454 42.308 0.00 0.00 0.00 2.85
39 40 4.451900 ACAAGAATCCACGAACAAGAAGT 58.548 39.130 0.00 0.00 0.00 3.01
40 41 5.607477 ACAAGAATCCACGAACAAGAAGTA 58.393 37.500 0.00 0.00 0.00 2.24
41 42 5.465724 ACAAGAATCCACGAACAAGAAGTAC 59.534 40.000 0.00 0.00 0.00 2.73
42 43 5.470047 AGAATCCACGAACAAGAAGTACT 57.530 39.130 0.00 0.00 0.00 2.73
43 44 5.855045 AGAATCCACGAACAAGAAGTACTT 58.145 37.500 8.13 8.13 39.70 2.24
59 60 9.614792 AAGAAGTACTTGAAAGACAAAGTACAT 57.385 29.630 14.14 13.36 40.77 2.29
60 61 9.046296 AGAAGTACTTGAAAGACAAAGTACATG 57.954 33.333 14.14 0.00 40.77 3.21
61 62 8.958119 AAGTACTTGAAAGACAAAGTACATGA 57.042 30.769 21.34 0.00 40.77 3.07
62 63 8.958119 AGTACTTGAAAGACAAAGTACATGAA 57.042 30.769 21.34 0.00 40.77 2.57
63 64 9.561069 AGTACTTGAAAGACAAAGTACATGAAT 57.439 29.630 21.34 4.35 40.77 2.57
80 81 7.246674 ACATGAATATGTATGTTTGGTCGAC 57.753 36.000 7.13 7.13 45.45 4.20
81 82 5.959652 TGAATATGTATGTTTGGTCGACG 57.040 39.130 9.92 0.00 0.00 5.12
82 83 5.652518 TGAATATGTATGTTTGGTCGACGA 58.347 37.500 9.92 1.86 0.00 4.20
83 84 6.277605 TGAATATGTATGTTTGGTCGACGAT 58.722 36.000 9.92 0.00 0.00 3.73
84 85 7.427214 TGAATATGTATGTTTGGTCGACGATA 58.573 34.615 9.92 0.00 0.00 2.92
85 86 7.921745 TGAATATGTATGTTTGGTCGACGATAA 59.078 33.333 9.92 1.89 0.00 1.75
86 87 5.961395 ATGTATGTTTGGTCGACGATAAC 57.039 39.130 9.92 13.19 0.00 1.89
87 88 5.063180 TGTATGTTTGGTCGACGATAACT 57.937 39.130 19.77 11.88 0.00 2.24
88 89 5.472148 TGTATGTTTGGTCGACGATAACTT 58.528 37.500 19.77 16.97 0.00 2.66
89 90 5.574055 TGTATGTTTGGTCGACGATAACTTC 59.426 40.000 19.77 13.20 0.00 3.01
90 91 4.247267 TGTTTGGTCGACGATAACTTCT 57.753 40.909 19.77 0.00 0.00 2.85
91 92 3.985279 TGTTTGGTCGACGATAACTTCTG 59.015 43.478 19.77 0.00 0.00 3.02
92 93 3.928727 TTGGTCGACGATAACTTCTGT 57.071 42.857 9.92 0.00 0.00 3.41
93 94 3.482722 TGGTCGACGATAACTTCTGTC 57.517 47.619 9.92 0.00 0.00 3.51
94 95 3.079578 TGGTCGACGATAACTTCTGTCT 58.920 45.455 9.92 0.00 0.00 3.41
95 96 3.119955 TGGTCGACGATAACTTCTGTCTG 60.120 47.826 9.92 0.00 0.00 3.51
96 97 3.427243 GTCGACGATAACTTCTGTCTGG 58.573 50.000 0.00 0.00 0.00 3.86
97 98 3.126514 GTCGACGATAACTTCTGTCTGGA 59.873 47.826 0.00 0.00 0.00 3.86
98 99 3.126514 TCGACGATAACTTCTGTCTGGAC 59.873 47.826 0.00 0.00 0.00 4.02
99 100 3.127203 CGACGATAACTTCTGTCTGGACT 59.873 47.826 0.00 0.00 0.00 3.85
100 101 4.331992 CGACGATAACTTCTGTCTGGACTA 59.668 45.833 0.00 0.00 0.00 2.59
101 102 5.163784 CGACGATAACTTCTGTCTGGACTAA 60.164 44.000 0.00 0.00 0.00 2.24
102 103 6.197364 ACGATAACTTCTGTCTGGACTAAG 57.803 41.667 11.78 11.78 33.90 2.18
103 104 5.944599 ACGATAACTTCTGTCTGGACTAAGA 59.055 40.000 16.92 5.47 32.84 2.10
104 105 6.094325 ACGATAACTTCTGTCTGGACTAAGAG 59.906 42.308 16.92 7.46 32.84 2.85
105 106 6.094325 CGATAACTTCTGTCTGGACTAAGAGT 59.906 42.308 16.92 7.90 32.84 3.24
106 107 5.461032 AACTTCTGTCTGGACTAAGAGTG 57.539 43.478 16.92 7.16 32.84 3.51
107 108 4.475345 ACTTCTGTCTGGACTAAGAGTGT 58.525 43.478 16.92 7.58 32.84 3.55
108 109 4.279671 ACTTCTGTCTGGACTAAGAGTGTG 59.720 45.833 16.92 3.92 32.84 3.82
109 110 3.833732 TCTGTCTGGACTAAGAGTGTGT 58.166 45.455 2.38 0.00 0.00 3.72
110 111 4.981812 TCTGTCTGGACTAAGAGTGTGTA 58.018 43.478 2.38 0.00 0.00 2.90
111 112 4.760715 TCTGTCTGGACTAAGAGTGTGTAC 59.239 45.833 2.38 0.00 0.00 2.90
112 113 4.466827 TGTCTGGACTAAGAGTGTGTACA 58.533 43.478 0.00 0.00 0.00 2.90
113 114 4.891168 TGTCTGGACTAAGAGTGTGTACAA 59.109 41.667 0.00 0.00 0.00 2.41
114 115 5.221130 GTCTGGACTAAGAGTGTGTACAAC 58.779 45.833 0.00 0.00 0.00 3.32
115 116 4.023450 TCTGGACTAAGAGTGTGTACAACG 60.023 45.833 0.00 0.00 0.00 4.10
116 117 3.884693 TGGACTAAGAGTGTGTACAACGA 59.115 43.478 0.00 0.00 0.00 3.85
117 118 4.521639 TGGACTAAGAGTGTGTACAACGAT 59.478 41.667 0.00 0.00 0.00 3.73
118 119 5.010314 TGGACTAAGAGTGTGTACAACGATT 59.990 40.000 0.00 2.46 0.00 3.34
119 120 6.207221 TGGACTAAGAGTGTGTACAACGATTA 59.793 38.462 0.00 3.39 0.00 1.75
120 121 7.086376 GGACTAAGAGTGTGTACAACGATTAA 58.914 38.462 0.00 0.00 0.00 1.40
121 122 7.758528 GGACTAAGAGTGTGTACAACGATTAAT 59.241 37.037 0.00 0.00 0.00 1.40
122 123 8.462143 ACTAAGAGTGTGTACAACGATTAATG 57.538 34.615 0.00 0.00 0.00 1.90
123 124 6.721571 AAGAGTGTGTACAACGATTAATGG 57.278 37.500 0.00 0.00 0.00 3.16
124 125 6.032956 AGAGTGTGTACAACGATTAATGGA 57.967 37.500 4.29 0.00 0.00 3.41
125 126 6.640518 AGAGTGTGTACAACGATTAATGGAT 58.359 36.000 4.29 0.00 0.00 3.41
126 127 6.535150 AGAGTGTGTACAACGATTAATGGATG 59.465 38.462 4.29 5.38 0.00 3.51
127 128 6.403049 AGTGTGTACAACGATTAATGGATGA 58.597 36.000 13.39 0.00 0.00 2.92
128 129 6.535150 AGTGTGTACAACGATTAATGGATGAG 59.465 38.462 13.39 0.00 0.00 2.90
129 130 6.312918 GTGTGTACAACGATTAATGGATGAGT 59.687 38.462 13.39 4.96 0.00 3.41
130 131 7.490079 GTGTGTACAACGATTAATGGATGAGTA 59.510 37.037 13.39 4.19 0.00 2.59
131 132 8.035984 TGTGTACAACGATTAATGGATGAGTAA 58.964 33.333 13.39 0.00 0.00 2.24
132 133 9.042008 GTGTACAACGATTAATGGATGAGTAAT 57.958 33.333 13.39 0.00 0.00 1.89
133 134 9.607988 TGTACAACGATTAATGGATGAGTAATT 57.392 29.630 13.39 0.00 0.00 1.40
178 179 9.784680 GATTAATTTGATATGACCATCATGAGC 57.215 33.333 0.09 0.00 37.70 4.26
179 180 8.929260 TTAATTTGATATGACCATCATGAGCT 57.071 30.769 0.09 0.00 37.70 4.09
180 181 7.450124 AATTTGATATGACCATCATGAGCTC 57.550 36.000 6.82 6.82 37.70 4.09
181 182 5.820404 TTGATATGACCATCATGAGCTCT 57.180 39.130 16.19 0.00 37.70 4.09
182 183 5.820404 TGATATGACCATCATGAGCTCTT 57.180 39.130 16.19 5.66 37.70 2.85
183 184 6.923199 TGATATGACCATCATGAGCTCTTA 57.077 37.500 16.19 0.13 37.70 2.10
184 185 6.932947 TGATATGACCATCATGAGCTCTTAG 58.067 40.000 16.19 4.80 37.70 2.18
185 186 4.620589 ATGACCATCATGAGCTCTTAGG 57.379 45.455 16.19 13.10 35.43 2.69
186 187 2.702478 TGACCATCATGAGCTCTTAGGG 59.298 50.000 16.19 13.16 0.00 3.53
187 188 1.419387 ACCATCATGAGCTCTTAGGGC 59.581 52.381 16.19 0.00 0.00 5.19
188 189 1.419012 CCATCATGAGCTCTTAGGGCA 59.581 52.381 16.19 0.00 0.00 5.36
189 190 2.040012 CCATCATGAGCTCTTAGGGCAT 59.960 50.000 16.19 0.00 0.00 4.40
190 191 3.336468 CATCATGAGCTCTTAGGGCATC 58.664 50.000 16.19 1.67 0.00 3.91
191 192 2.687297 TCATGAGCTCTTAGGGCATCT 58.313 47.619 16.19 0.00 0.00 2.90
192 193 2.632028 TCATGAGCTCTTAGGGCATCTC 59.368 50.000 16.19 0.00 0.00 2.75
193 194 2.468301 TGAGCTCTTAGGGCATCTCT 57.532 50.000 16.19 0.00 0.00 3.10
194 195 3.602205 TGAGCTCTTAGGGCATCTCTA 57.398 47.619 16.19 0.00 0.00 2.43
195 196 3.916035 TGAGCTCTTAGGGCATCTCTAA 58.084 45.455 16.19 0.00 0.00 2.10
196 197 3.639094 TGAGCTCTTAGGGCATCTCTAAC 59.361 47.826 16.19 0.00 0.00 2.34
197 198 3.639094 GAGCTCTTAGGGCATCTCTAACA 59.361 47.826 6.92 0.00 0.00 2.41
198 199 3.640967 AGCTCTTAGGGCATCTCTAACAG 59.359 47.826 6.92 0.00 0.00 3.16
199 200 3.386402 GCTCTTAGGGCATCTCTAACAGT 59.614 47.826 0.00 0.00 0.00 3.55
200 201 4.141824 GCTCTTAGGGCATCTCTAACAGTT 60.142 45.833 0.00 0.00 0.00 3.16
201 202 5.344743 TCTTAGGGCATCTCTAACAGTTG 57.655 43.478 0.00 0.00 0.00 3.16
202 203 4.777896 TCTTAGGGCATCTCTAACAGTTGT 59.222 41.667 0.00 0.00 0.00 3.32
203 204 5.955959 TCTTAGGGCATCTCTAACAGTTGTA 59.044 40.000 0.00 0.00 0.00 2.41
204 205 6.611642 TCTTAGGGCATCTCTAACAGTTGTAT 59.388 38.462 0.00 0.00 0.00 2.29
205 206 5.028549 AGGGCATCTCTAACAGTTGTATG 57.971 43.478 0.00 0.00 0.00 2.39
206 207 4.716784 AGGGCATCTCTAACAGTTGTATGA 59.283 41.667 0.00 0.00 0.00 2.15
207 208 5.367937 AGGGCATCTCTAACAGTTGTATGAT 59.632 40.000 0.00 0.00 0.00 2.45
208 209 5.698545 GGGCATCTCTAACAGTTGTATGATC 59.301 44.000 0.00 0.00 0.00 2.92
209 210 6.283694 GGCATCTCTAACAGTTGTATGATCA 58.716 40.000 0.00 0.00 0.00 2.92
210 211 6.933521 GGCATCTCTAACAGTTGTATGATCAT 59.066 38.462 13.81 13.81 0.00 2.45
211 212 7.443575 GGCATCTCTAACAGTTGTATGATCATT 59.556 37.037 14.65 0.00 0.00 2.57
212 213 8.281194 GCATCTCTAACAGTTGTATGATCATTG 58.719 37.037 14.65 8.13 0.00 2.82
213 214 9.322773 CATCTCTAACAGTTGTATGATCATTGT 57.677 33.333 14.65 8.82 0.00 2.71
214 215 9.896645 ATCTCTAACAGTTGTATGATCATTGTT 57.103 29.630 20.70 20.70 33.47 2.83
215 216 9.154847 TCTCTAACAGTTGTATGATCATTGTTG 57.845 33.333 23.67 16.48 32.25 3.33
216 217 8.267620 TCTAACAGTTGTATGATCATTGTTGG 57.732 34.615 23.67 21.63 32.25 3.77
217 218 6.899393 AACAGTTGTATGATCATTGTTGGT 57.101 33.333 14.65 3.37 30.31 3.67
218 219 7.994425 AACAGTTGTATGATCATTGTTGGTA 57.006 32.000 14.65 0.00 30.31 3.25
219 220 7.994425 ACAGTTGTATGATCATTGTTGGTAA 57.006 32.000 14.65 0.00 0.00 2.85
220 221 8.402798 ACAGTTGTATGATCATTGTTGGTAAA 57.597 30.769 14.65 0.00 0.00 2.01
221 222 8.514594 ACAGTTGTATGATCATTGTTGGTAAAG 58.485 33.333 14.65 0.00 0.00 1.85
222 223 8.514594 CAGTTGTATGATCATTGTTGGTAAAGT 58.485 33.333 14.65 0.00 0.00 2.66
223 224 9.077885 AGTTGTATGATCATTGTTGGTAAAGTT 57.922 29.630 14.65 0.00 0.00 2.66
224 225 9.128107 GTTGTATGATCATTGTTGGTAAAGTTG 57.872 33.333 14.65 0.00 0.00 3.16
225 226 7.312154 TGTATGATCATTGTTGGTAAAGTTGC 58.688 34.615 14.65 0.00 0.00 4.17
226 227 5.132897 TGATCATTGTTGGTAAAGTTGCC 57.867 39.130 0.00 0.00 0.00 4.52
227 228 4.586421 TGATCATTGTTGGTAAAGTTGCCA 59.414 37.500 0.00 0.00 41.35 4.92
228 229 4.314740 TCATTGTTGGTAAAGTTGCCAC 57.685 40.909 0.00 0.00 42.80 5.01
229 230 3.068873 TCATTGTTGGTAAAGTTGCCACC 59.931 43.478 0.00 0.00 42.80 4.61
230 231 2.445682 TGTTGGTAAAGTTGCCACCT 57.554 45.000 0.00 0.00 42.80 4.00
231 232 3.579534 TGTTGGTAAAGTTGCCACCTA 57.420 42.857 0.00 0.00 42.80 3.08
232 233 3.482436 TGTTGGTAAAGTTGCCACCTAG 58.518 45.455 0.00 0.00 42.80 3.02
233 234 3.136809 TGTTGGTAAAGTTGCCACCTAGA 59.863 43.478 0.00 0.00 42.80 2.43
234 235 3.412237 TGGTAAAGTTGCCACCTAGAC 57.588 47.619 0.00 0.00 38.05 2.59
235 236 2.976882 TGGTAAAGTTGCCACCTAGACT 59.023 45.455 0.00 0.00 38.05 3.24
236 237 4.161876 TGGTAAAGTTGCCACCTAGACTA 58.838 43.478 0.00 0.00 38.05 2.59
237 238 4.781087 TGGTAAAGTTGCCACCTAGACTAT 59.219 41.667 0.00 0.00 38.05 2.12
238 239 5.249852 TGGTAAAGTTGCCACCTAGACTATT 59.750 40.000 0.00 0.00 38.05 1.73
239 240 6.178324 GGTAAAGTTGCCACCTAGACTATTT 58.822 40.000 0.00 0.00 32.69 1.40
240 241 6.657966 GGTAAAGTTGCCACCTAGACTATTTT 59.342 38.462 0.00 0.00 32.69 1.82
241 242 6.575162 AAAGTTGCCACCTAGACTATTTTG 57.425 37.500 0.00 0.00 0.00 2.44
242 243 5.499004 AGTTGCCACCTAGACTATTTTGA 57.501 39.130 0.00 0.00 0.00 2.69
243 244 6.067217 AGTTGCCACCTAGACTATTTTGAT 57.933 37.500 0.00 0.00 0.00 2.57
244 245 5.882557 AGTTGCCACCTAGACTATTTTGATG 59.117 40.000 0.00 0.00 0.00 3.07
245 246 5.692115 TGCCACCTAGACTATTTTGATGA 57.308 39.130 0.00 0.00 0.00 2.92
246 247 5.428253 TGCCACCTAGACTATTTTGATGAC 58.572 41.667 0.00 0.00 0.00 3.06
247 248 5.045942 TGCCACCTAGACTATTTTGATGACA 60.046 40.000 0.00 0.00 0.00 3.58
248 249 6.058183 GCCACCTAGACTATTTTGATGACAT 58.942 40.000 0.00 0.00 0.00 3.06
249 250 6.017605 GCCACCTAGACTATTTTGATGACATG 60.018 42.308 0.00 0.00 0.00 3.21
250 251 6.484643 CCACCTAGACTATTTTGATGACATGG 59.515 42.308 0.00 0.00 0.00 3.66
251 252 6.017605 CACCTAGACTATTTTGATGACATGGC 60.018 42.308 0.00 0.00 0.00 4.40
252 253 6.057533 CCTAGACTATTTTGATGACATGGCA 58.942 40.000 2.18 2.18 0.00 4.92
253 254 5.824904 AGACTATTTTGATGACATGGCAC 57.175 39.130 1.45 0.00 0.00 5.01
273 274 7.851228 TGGCACATAATAAAAGAAGAGAGAGA 58.149 34.615 0.00 0.00 0.00 3.10
274 275 8.321353 TGGCACATAATAAAAGAAGAGAGAGAA 58.679 33.333 0.00 0.00 0.00 2.87
275 276 8.608317 GGCACATAATAAAAGAAGAGAGAGAAC 58.392 37.037 0.00 0.00 0.00 3.01
276 277 8.324567 GCACATAATAAAAGAAGAGAGAGAACG 58.675 37.037 0.00 0.00 0.00 3.95
277 278 9.574458 CACATAATAAAAGAAGAGAGAGAACGA 57.426 33.333 0.00 0.00 0.00 3.85
281 282 7.892778 ATAAAAGAAGAGAGAGAACGAAACC 57.107 36.000 0.00 0.00 0.00 3.27
282 283 3.562567 AGAAGAGAGAGAACGAAACCG 57.437 47.619 0.00 0.00 0.00 4.44
283 284 2.885894 AGAAGAGAGAGAACGAAACCGT 59.114 45.455 0.00 0.00 42.82 4.83
284 285 4.070716 AGAAGAGAGAGAACGAAACCGTA 58.929 43.478 0.00 0.00 39.67 4.02
285 286 4.701171 AGAAGAGAGAGAACGAAACCGTAT 59.299 41.667 0.00 0.00 39.67 3.06
286 287 4.358494 AGAGAGAGAACGAAACCGTATG 57.642 45.455 0.00 0.00 39.67 2.39
287 288 4.008330 AGAGAGAGAACGAAACCGTATGA 58.992 43.478 0.00 0.00 39.67 2.15
288 289 4.458295 AGAGAGAGAACGAAACCGTATGAA 59.542 41.667 0.00 0.00 39.67 2.57
289 290 4.483311 AGAGAGAACGAAACCGTATGAAC 58.517 43.478 0.00 0.00 39.67 3.18
290 291 3.582780 AGAGAACGAAACCGTATGAACC 58.417 45.455 0.00 0.00 39.67 3.62
291 292 3.257624 AGAGAACGAAACCGTATGAACCT 59.742 43.478 0.00 0.00 39.67 3.50
292 293 3.323243 AGAACGAAACCGTATGAACCTG 58.677 45.455 0.00 0.00 39.67 4.00
293 294 3.006110 AGAACGAAACCGTATGAACCTGA 59.994 43.478 0.00 0.00 39.67 3.86
294 295 3.389925 ACGAAACCGTATGAACCTGAA 57.610 42.857 0.00 0.00 38.67 3.02
295 296 3.323243 ACGAAACCGTATGAACCTGAAG 58.677 45.455 0.00 0.00 38.67 3.02
296 297 2.093783 CGAAACCGTATGAACCTGAAGC 59.906 50.000 0.00 0.00 0.00 3.86
297 298 2.851263 AACCGTATGAACCTGAAGCA 57.149 45.000 0.00 0.00 0.00 3.91
298 299 2.851263 ACCGTATGAACCTGAAGCAA 57.149 45.000 0.00 0.00 0.00 3.91
299 300 2.423577 ACCGTATGAACCTGAAGCAAC 58.576 47.619 0.00 0.00 0.00 4.17
300 301 1.393539 CCGTATGAACCTGAAGCAACG 59.606 52.381 0.00 0.00 0.00 4.10
301 302 1.201921 CGTATGAACCTGAAGCAACGC 60.202 52.381 0.00 0.00 0.00 4.84
302 303 2.076863 GTATGAACCTGAAGCAACGCT 58.923 47.619 0.00 0.00 42.56 5.07
303 304 1.160137 ATGAACCTGAAGCAACGCTC 58.840 50.000 0.00 0.00 38.25 5.03
304 305 0.884704 TGAACCTGAAGCAACGCTCC 60.885 55.000 0.00 0.00 38.25 4.70
305 306 0.884704 GAACCTGAAGCAACGCTCCA 60.885 55.000 0.00 0.00 38.25 3.86
306 307 0.250901 AACCTGAAGCAACGCTCCAT 60.251 50.000 0.00 0.00 38.25 3.41
307 308 0.957395 ACCTGAAGCAACGCTCCATG 60.957 55.000 0.00 0.00 38.25 3.66
308 309 1.136147 CTGAAGCAACGCTCCATGC 59.864 57.895 0.00 0.00 38.25 4.06
309 310 1.579964 CTGAAGCAACGCTCCATGCA 61.580 55.000 0.00 0.00 44.95 3.96
310 311 1.154150 GAAGCAACGCTCCATGCAC 60.154 57.895 0.00 0.00 44.95 4.57
311 312 1.855213 GAAGCAACGCTCCATGCACA 61.855 55.000 0.00 0.00 44.95 4.57
312 313 1.454572 AAGCAACGCTCCATGCACAA 61.455 50.000 0.00 0.00 44.95 3.33
313 314 1.443194 GCAACGCTCCATGCACAAG 60.443 57.895 0.00 0.00 42.12 3.16
314 315 1.443194 CAACGCTCCATGCACAAGC 60.443 57.895 6.71 6.71 43.06 4.01
315 316 1.601759 AACGCTCCATGCACAAGCT 60.602 52.632 13.14 0.00 43.06 3.74
316 317 1.580845 AACGCTCCATGCACAAGCTC 61.581 55.000 13.14 0.00 43.06 4.09
317 318 2.758089 CGCTCCATGCACAAGCTCC 61.758 63.158 13.14 0.00 43.06 4.70
318 319 2.758089 GCTCCATGCACAAGCTCCG 61.758 63.158 9.02 0.00 42.74 4.63
319 320 1.078918 CTCCATGCACAAGCTCCGA 60.079 57.895 0.00 0.00 42.74 4.55
320 321 1.078918 TCCATGCACAAGCTCCGAG 60.079 57.895 0.00 0.00 42.74 4.63
321 322 2.110967 CCATGCACAAGCTCCGAGG 61.111 63.158 0.00 0.00 42.74 4.63
322 323 2.437359 ATGCACAAGCTCCGAGGC 60.437 61.111 0.00 0.00 42.74 4.70
323 324 3.258228 ATGCACAAGCTCCGAGGCA 62.258 57.895 0.00 0.00 42.74 4.75
324 325 2.669569 GCACAAGCTCCGAGGCAA 60.670 61.111 0.00 0.00 37.91 4.52
325 326 2.684843 GCACAAGCTCCGAGGCAAG 61.685 63.158 0.00 0.00 37.91 4.01
326 327 2.359230 ACAAGCTCCGAGGCAAGC 60.359 61.111 0.00 0.00 38.84 4.01
327 328 3.130160 CAAGCTCCGAGGCAAGCC 61.130 66.667 2.02 2.02 39.39 4.35
328 329 4.416738 AAGCTCCGAGGCAAGCCC 62.417 66.667 7.62 0.00 39.39 5.19
331 332 4.821589 CTCCGAGGCAAGCCCGTC 62.822 72.222 7.62 0.00 39.21 4.79
334 335 4.473520 CGAGGCAAGCCCGTCCAT 62.474 66.667 7.62 0.00 39.21 3.41
335 336 2.044946 GAGGCAAGCCCGTCCATT 60.045 61.111 7.62 0.00 39.21 3.16
336 337 1.678970 GAGGCAAGCCCGTCCATTT 60.679 57.895 7.62 0.00 39.21 2.32
337 338 1.657751 GAGGCAAGCCCGTCCATTTC 61.658 60.000 7.62 0.00 39.21 2.17
338 339 1.678970 GGCAAGCCCGTCCATTTCT 60.679 57.895 0.00 0.00 0.00 2.52
339 340 1.250840 GGCAAGCCCGTCCATTTCTT 61.251 55.000 0.00 0.00 0.00 2.52
340 341 0.171231 GCAAGCCCGTCCATTTCTTC 59.829 55.000 0.00 0.00 0.00 2.87
341 342 1.533625 CAAGCCCGTCCATTTCTTCA 58.466 50.000 0.00 0.00 0.00 3.02
342 343 1.885887 CAAGCCCGTCCATTTCTTCAA 59.114 47.619 0.00 0.00 0.00 2.69
343 344 1.534729 AGCCCGTCCATTTCTTCAAC 58.465 50.000 0.00 0.00 0.00 3.18
344 345 1.202879 AGCCCGTCCATTTCTTCAACA 60.203 47.619 0.00 0.00 0.00 3.33
345 346 1.818674 GCCCGTCCATTTCTTCAACAT 59.181 47.619 0.00 0.00 0.00 2.71
346 347 2.231235 GCCCGTCCATTTCTTCAACATT 59.769 45.455 0.00 0.00 0.00 2.71
347 348 3.306019 GCCCGTCCATTTCTTCAACATTT 60.306 43.478 0.00 0.00 0.00 2.32
348 349 4.082463 GCCCGTCCATTTCTTCAACATTTA 60.082 41.667 0.00 0.00 0.00 1.40
349 350 5.640732 CCCGTCCATTTCTTCAACATTTAG 58.359 41.667 0.00 0.00 0.00 1.85
350 351 5.183140 CCCGTCCATTTCTTCAACATTTAGT 59.817 40.000 0.00 0.00 0.00 2.24
351 352 6.086222 CCGTCCATTTCTTCAACATTTAGTG 58.914 40.000 0.00 0.00 0.00 2.74
352 353 6.086222 CGTCCATTTCTTCAACATTTAGTGG 58.914 40.000 0.00 0.00 0.00 4.00
353 354 6.072728 CGTCCATTTCTTCAACATTTAGTGGA 60.073 38.462 0.00 0.00 0.00 4.02
354 355 7.084486 GTCCATTTCTTCAACATTTAGTGGAC 58.916 38.462 0.00 0.00 43.25 4.02
355 356 6.208599 TCCATTTCTTCAACATTTAGTGGACC 59.791 38.462 0.00 0.00 27.00 4.46
356 357 6.389906 CATTTCTTCAACATTTAGTGGACCC 58.610 40.000 0.00 0.00 27.00 4.46
357 358 4.715534 TCTTCAACATTTAGTGGACCCA 57.284 40.909 0.00 0.00 27.00 4.51
358 359 5.255397 TCTTCAACATTTAGTGGACCCAT 57.745 39.130 0.00 0.00 27.00 4.00
359 360 5.253330 TCTTCAACATTTAGTGGACCCATC 58.747 41.667 0.00 0.00 27.00 3.51
360 361 4.927267 TCAACATTTAGTGGACCCATCT 57.073 40.909 0.00 0.00 0.00 2.90
361 362 6.214615 TCTTCAACATTTAGTGGACCCATCTA 59.785 38.462 0.00 0.00 27.00 1.98
362 363 5.989477 TCAACATTTAGTGGACCCATCTAG 58.011 41.667 0.00 0.00 0.00 2.43
363 364 5.487488 TCAACATTTAGTGGACCCATCTAGT 59.513 40.000 0.00 0.00 0.00 2.57
364 365 6.012858 TCAACATTTAGTGGACCCATCTAGTT 60.013 38.462 0.00 0.00 0.00 2.24
365 366 7.181305 TCAACATTTAGTGGACCCATCTAGTTA 59.819 37.037 0.00 0.00 0.00 2.24
366 367 7.691993 ACATTTAGTGGACCCATCTAGTTAT 57.308 36.000 0.00 0.00 0.00 1.89
367 368 8.102484 ACATTTAGTGGACCCATCTAGTTATT 57.898 34.615 0.00 0.00 0.00 1.40
368 369 8.557450 ACATTTAGTGGACCCATCTAGTTATTT 58.443 33.333 0.00 0.00 0.00 1.40
371 372 9.895138 TTTAGTGGACCCATCTAGTTATTTAAC 57.105 33.333 0.00 0.00 36.46 2.01
372 373 7.504926 AGTGGACCCATCTAGTTATTTAACA 57.495 36.000 3.50 0.00 38.62 2.41
373 374 8.102484 AGTGGACCCATCTAGTTATTTAACAT 57.898 34.615 3.50 0.00 38.62 2.71
374 375 9.220906 AGTGGACCCATCTAGTTATTTAACATA 57.779 33.333 3.50 0.00 38.62 2.29
375 376 9.269453 GTGGACCCATCTAGTTATTTAACATAC 57.731 37.037 3.50 0.00 38.62 2.39
376 377 8.145767 TGGACCCATCTAGTTATTTAACATACG 58.854 37.037 3.50 0.00 38.62 3.06
377 378 7.117379 GGACCCATCTAGTTATTTAACATACGC 59.883 40.741 3.50 0.00 38.62 4.42
378 379 7.732996 ACCCATCTAGTTATTTAACATACGCT 58.267 34.615 3.50 0.00 38.62 5.07
379 380 8.208903 ACCCATCTAGTTATTTAACATACGCTT 58.791 33.333 3.50 0.00 38.62 4.68
380 381 9.701098 CCCATCTAGTTATTTAACATACGCTTA 57.299 33.333 3.50 0.00 38.62 3.09
390 391 8.638685 ATTTAACATACGCTTAACATACGTCT 57.361 30.769 0.00 0.00 40.99 4.18
391 392 9.734620 ATTTAACATACGCTTAACATACGTCTA 57.265 29.630 0.00 0.00 40.99 2.59
392 393 9.566530 TTTAACATACGCTTAACATACGTCTAA 57.433 29.630 0.00 0.00 40.99 2.10
393 394 9.734620 TTAACATACGCTTAACATACGTCTAAT 57.265 29.630 0.00 0.00 40.99 1.73
394 395 8.638685 AACATACGCTTAACATACGTCTAATT 57.361 30.769 0.00 0.00 40.99 1.40
395 396 8.057812 ACATACGCTTAACATACGTCTAATTG 57.942 34.615 0.00 0.00 40.99 2.32
396 397 7.916977 ACATACGCTTAACATACGTCTAATTGA 59.083 33.333 0.00 0.00 40.99 2.57
397 398 8.748582 CATACGCTTAACATACGTCTAATTGAA 58.251 33.333 0.00 0.00 40.99 2.69
398 399 7.218145 ACGCTTAACATACGTCTAATTGAAG 57.782 36.000 0.00 0.00 34.35 3.02
399 400 7.031372 ACGCTTAACATACGTCTAATTGAAGA 58.969 34.615 0.00 0.00 34.35 2.87
400 401 7.220300 ACGCTTAACATACGTCTAATTGAAGAG 59.780 37.037 0.00 0.00 34.35 2.85
401 402 7.220300 CGCTTAACATACGTCTAATTGAAGAGT 59.780 37.037 0.00 0.00 0.00 3.24
402 403 8.533153 GCTTAACATACGTCTAATTGAAGAGTC 58.467 37.037 0.00 0.00 0.00 3.36
403 404 9.790389 CTTAACATACGTCTAATTGAAGAGTCT 57.210 33.333 0.00 0.00 0.00 3.24
417 418 9.896645 AATTGAAGAGTCTATATGATGTGTTGT 57.103 29.630 0.00 0.00 0.00 3.32
418 419 9.896645 ATTGAAGAGTCTATATGATGTGTTGTT 57.103 29.630 0.00 0.00 0.00 2.83
419 420 8.707938 TGAAGAGTCTATATGATGTGTTGTTG 57.292 34.615 0.00 0.00 0.00 3.33
420 421 7.765819 TGAAGAGTCTATATGATGTGTTGTTGG 59.234 37.037 0.00 0.00 0.00 3.77
421 422 6.051717 AGAGTCTATATGATGTGTTGTTGGC 58.948 40.000 0.00 0.00 0.00 4.52
422 423 5.994250 AGTCTATATGATGTGTTGTTGGCT 58.006 37.500 0.00 0.00 0.00 4.75
423 424 5.819379 AGTCTATATGATGTGTTGTTGGCTG 59.181 40.000 0.00 0.00 0.00 4.85
424 425 3.788333 ATATGATGTGTTGTTGGCTGC 57.212 42.857 0.00 0.00 0.00 5.25
425 426 1.624336 ATGATGTGTTGTTGGCTGCT 58.376 45.000 0.00 0.00 0.00 4.24
426 427 0.669619 TGATGTGTTGTTGGCTGCTG 59.330 50.000 0.00 0.00 0.00 4.41
427 428 0.953727 GATGTGTTGTTGGCTGCTGA 59.046 50.000 0.00 0.00 0.00 4.26
428 429 0.670162 ATGTGTTGTTGGCTGCTGAC 59.330 50.000 0.00 0.00 0.00 3.51
429 430 1.009675 GTGTTGTTGGCTGCTGACG 60.010 57.895 0.00 0.00 0.00 4.35
430 431 1.451207 TGTTGTTGGCTGCTGACGT 60.451 52.632 0.00 0.00 0.00 4.34
431 432 1.009675 GTTGTTGGCTGCTGACGTG 60.010 57.895 0.00 0.00 0.00 4.49
432 433 2.186160 TTGTTGGCTGCTGACGTGG 61.186 57.895 0.00 0.00 0.00 4.94
433 434 2.280797 GTTGGCTGCTGACGTGGA 60.281 61.111 0.00 0.00 0.00 4.02
434 435 2.280797 TTGGCTGCTGACGTGGAC 60.281 61.111 0.00 0.00 0.00 4.02
435 436 3.100503 TTGGCTGCTGACGTGGACA 62.101 57.895 0.00 0.00 0.00 4.02
436 437 3.044305 GGCTGCTGACGTGGACAC 61.044 66.667 0.00 0.00 0.00 3.67
437 438 2.029666 GCTGCTGACGTGGACACT 59.970 61.111 0.00 0.00 0.00 3.55
438 439 1.595382 GCTGCTGACGTGGACACTT 60.595 57.895 0.00 0.00 0.00 3.16
439 440 0.319555 GCTGCTGACGTGGACACTTA 60.320 55.000 0.00 0.00 0.00 2.24
440 441 1.673033 GCTGCTGACGTGGACACTTAT 60.673 52.381 0.00 0.00 0.00 1.73
441 442 2.416836 GCTGCTGACGTGGACACTTATA 60.417 50.000 0.00 0.00 0.00 0.98
442 443 3.179830 CTGCTGACGTGGACACTTATAC 58.820 50.000 0.00 0.00 0.00 1.47
443 444 2.094390 TGCTGACGTGGACACTTATACC 60.094 50.000 0.00 0.00 0.00 2.73
444 445 2.094390 GCTGACGTGGACACTTATACCA 60.094 50.000 0.00 0.00 0.00 3.25
445 446 3.615592 GCTGACGTGGACACTTATACCAA 60.616 47.826 0.00 0.00 35.40 3.67
446 447 3.916761 TGACGTGGACACTTATACCAAC 58.083 45.455 0.00 0.00 35.40 3.77
447 448 2.919229 GACGTGGACACTTATACCAACG 59.081 50.000 0.00 0.00 35.40 4.10
448 449 2.557924 ACGTGGACACTTATACCAACGA 59.442 45.455 0.00 0.00 35.40 3.85
449 450 3.194116 ACGTGGACACTTATACCAACGAT 59.806 43.478 0.00 0.00 35.40 3.73
450 451 4.178540 CGTGGACACTTATACCAACGATT 58.821 43.478 0.56 0.00 35.40 3.34
451 452 4.032445 CGTGGACACTTATACCAACGATTG 59.968 45.833 0.56 0.00 35.40 2.67
452 453 4.933400 GTGGACACTTATACCAACGATTGT 59.067 41.667 0.00 0.00 35.40 2.71
453 454 6.101332 GTGGACACTTATACCAACGATTGTA 58.899 40.000 0.00 0.00 35.40 2.41
454 455 6.035327 GTGGACACTTATACCAACGATTGTAC 59.965 42.308 0.00 0.00 35.40 2.90
455 456 6.101332 GGACACTTATACCAACGATTGTACA 58.899 40.000 0.00 0.00 0.00 2.90
456 457 6.759827 GGACACTTATACCAACGATTGTACAT 59.240 38.462 0.00 0.00 0.00 2.29
457 458 7.922278 GGACACTTATACCAACGATTGTACATA 59.078 37.037 0.00 0.00 0.00 2.29
458 459 9.472361 GACACTTATACCAACGATTGTACATAT 57.528 33.333 0.00 0.00 0.00 1.78
465 466 9.826574 ATACCAACGATTGTACATATAAACTGT 57.173 29.630 0.00 0.00 0.00 3.55
466 467 8.556213 ACCAACGATTGTACATATAAACTGTT 57.444 30.769 0.00 0.00 0.00 3.16
467 468 8.447833 ACCAACGATTGTACATATAAACTGTTG 58.552 33.333 0.00 4.21 33.51 3.33
468 469 7.428183 CCAACGATTGTACATATAAACTGTTGC 59.572 37.037 0.00 0.00 32.65 4.17
469 470 7.603963 ACGATTGTACATATAAACTGTTGCA 57.396 32.000 0.00 0.00 0.00 4.08
470 471 7.684670 ACGATTGTACATATAAACTGTTGCAG 58.315 34.615 0.00 0.00 37.52 4.41
471 472 7.547722 ACGATTGTACATATAAACTGTTGCAGA 59.452 33.333 0.00 0.00 35.18 4.26
472 473 8.551205 CGATTGTACATATAAACTGTTGCAGAT 58.449 33.333 0.00 0.00 35.18 2.90
473 474 9.655769 GATTGTACATATAAACTGTTGCAGATG 57.344 33.333 0.00 1.49 35.18 2.90
474 475 7.015226 TGTACATATAAACTGTTGCAGATGC 57.985 36.000 2.91 0.00 42.50 3.91
475 476 6.823182 TGTACATATAAACTGTTGCAGATGCT 59.177 34.615 6.35 2.51 42.66 3.79
476 477 6.369059 ACATATAAACTGTTGCAGATGCTC 57.631 37.500 6.35 0.50 42.66 4.26
477 478 6.118170 ACATATAAACTGTTGCAGATGCTCT 58.882 36.000 6.35 0.00 42.66 4.09
478 479 6.600822 ACATATAAACTGTTGCAGATGCTCTT 59.399 34.615 6.35 0.00 42.66 2.85
479 480 7.770433 ACATATAAACTGTTGCAGATGCTCTTA 59.230 33.333 6.35 0.00 42.66 2.10
480 481 6.674694 ATAAACTGTTGCAGATGCTCTTAG 57.325 37.500 6.35 2.54 42.66 2.18
481 482 2.354259 ACTGTTGCAGATGCTCTTAGC 58.646 47.619 6.35 0.00 42.66 3.09
482 483 2.027377 ACTGTTGCAGATGCTCTTAGCT 60.027 45.455 6.35 0.00 42.66 3.32
483 484 2.352034 CTGTTGCAGATGCTCTTAGCTG 59.648 50.000 6.35 0.00 42.66 4.24
484 485 2.027837 TGTTGCAGATGCTCTTAGCTGA 60.028 45.455 6.35 0.00 42.97 4.26
485 486 3.005554 GTTGCAGATGCTCTTAGCTGAA 58.994 45.455 6.35 0.00 42.97 3.02
486 487 2.902523 TGCAGATGCTCTTAGCTGAAG 58.097 47.619 6.35 0.00 42.97 3.02
487 488 2.211806 GCAGATGCTCTTAGCTGAAGG 58.788 52.381 0.00 0.00 42.97 3.46
488 489 2.211806 CAGATGCTCTTAGCTGAAGGC 58.788 52.381 0.00 0.00 42.97 4.35
511 512 6.366630 GCGTATTCTTTAATCTCAGCCATTC 58.633 40.000 0.00 0.00 0.00 2.67
533 534 8.906867 CATTCATTCAATTAAGAGGTGGTGTAT 58.093 33.333 0.00 0.00 0.00 2.29
538 539 8.698973 TTCAATTAAGAGGTGGTGTATTGAAA 57.301 30.769 0.00 0.00 37.49 2.69
741 748 4.217550 TGGAAACAAACAGCCTATAAGCAC 59.782 41.667 0.00 0.00 37.44 4.40
775 782 3.612247 ATCACGGGCACACAGAGGC 62.612 63.158 0.00 0.00 0.00 4.70
881 898 6.650807 GGAATTCGTGGATGATGATAGCTTTA 59.349 38.462 0.00 0.00 0.00 1.85
884 901 3.675225 CGTGGATGATGATAGCTTTACCG 59.325 47.826 0.00 0.00 0.00 4.02
902 920 3.482436 ACCGCAACTTTCCAGTCATTTA 58.518 40.909 0.00 0.00 30.45 1.40
906 924 5.335583 CCGCAACTTTCCAGTCATTTATTCA 60.336 40.000 0.00 0.00 30.45 2.57
932 964 6.878317 ACCATAGGATTCGTCCACATATATG 58.122 40.000 11.29 11.29 0.00 1.78
970 1017 0.669077 CCTCTCATACGTCTTCCCCG 59.331 60.000 0.00 0.00 0.00 5.73
994 1043 1.337728 CCCCACGGCCAAAATTTTCTC 60.338 52.381 2.24 0.00 0.00 2.87
1103 1160 2.960688 AAGGGGAAGGCTGCTCGAC 61.961 63.158 0.00 0.00 0.00 4.20
1135 1192 2.359850 GCGGCAACCTCACCATCA 60.360 61.111 0.00 0.00 0.00 3.07
1143 1200 1.281925 ACCTCACCATCACCCATCCC 61.282 60.000 0.00 0.00 0.00 3.85
1176 1233 2.446802 AGGGAGGCGGGAAGATCC 60.447 66.667 0.00 0.00 35.23 3.36
1224 1281 1.469703 TGCTCAAATGACAGCATTCCG 59.530 47.619 0.00 0.00 43.71 4.30
1281 1347 3.129813 GCTTTGCAATCATGGACATCTCA 59.870 43.478 0.00 0.00 0.00 3.27
1446 2706 5.239306 CCTCATCTTCTACAAGTGCACAAAA 59.761 40.000 21.04 0.04 0.00 2.44
1458 2748 1.801309 GCACAAAAAGGGTGGCGCTA 61.801 55.000 7.64 0.00 36.76 4.26
1482 2772 0.392706 AGGTGAGATGCGTGAACACA 59.607 50.000 5.80 0.00 33.82 3.72
1523 2813 1.471676 GGGAGTGCGTTTCGATGAGAT 60.472 52.381 0.00 0.00 0.00 2.75
1525 2815 2.530177 GAGTGCGTTTCGATGAGATGA 58.470 47.619 0.00 0.00 0.00 2.92
1535 2825 3.542648 TCGATGAGATGAGGAACTACGT 58.457 45.455 0.00 0.00 41.55 3.57
1799 9034 0.373716 GATCGTGTTGCGGATGTTCC 59.626 55.000 0.00 0.00 41.72 3.62
1929 9164 5.183904 AGCTTTGTCTTGAGTCAAACTTTGT 59.816 36.000 7.06 0.00 31.74 2.83
2145 9381 3.309954 GGAGCGAGTACTAGCAAAATTGG 59.690 47.826 26.76 0.00 33.49 3.16
2156 9392 2.621055 AGCAAAATTGGCACGTGTAGAA 59.379 40.909 18.38 7.90 0.00 2.10
2172 9408 5.447818 CGTGTAGAATTTTCTCCAGCAATCC 60.448 44.000 0.00 0.00 38.70 3.01
2259 9495 7.461182 TTCACCTTTTCGATGGTTGAATTAT 57.539 32.000 3.00 0.00 33.75 1.28
2264 9500 7.394923 ACCTTTTCGATGGTTGAATTATGGTTA 59.605 33.333 0.00 0.00 31.62 2.85
2332 9568 2.199652 CCGTTGCCACAACCCATGT 61.200 57.895 4.96 0.00 45.34 3.21
2334 9570 0.318614 CGTTGCCACAACCCATGTTC 60.319 55.000 4.96 0.00 41.46 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.687166 TTCTTGTATCGGGATAGGTTTGT 57.313 39.130 0.00 0.00 0.00 2.83
3 4 5.368523 TGGATTCTTGTATCGGGATAGGTTT 59.631 40.000 0.00 0.00 0.00 3.27
4 5 4.905456 TGGATTCTTGTATCGGGATAGGTT 59.095 41.667 0.00 0.00 0.00 3.50
5 6 4.283722 GTGGATTCTTGTATCGGGATAGGT 59.716 45.833 0.00 0.00 0.00 3.08
6 7 4.618460 CGTGGATTCTTGTATCGGGATAGG 60.618 50.000 0.00 0.00 0.00 2.57
7 8 4.217767 TCGTGGATTCTTGTATCGGGATAG 59.782 45.833 0.00 0.00 0.00 2.08
8 9 4.146564 TCGTGGATTCTTGTATCGGGATA 58.853 43.478 0.00 0.00 0.00 2.59
9 10 2.963101 TCGTGGATTCTTGTATCGGGAT 59.037 45.455 0.00 0.00 0.00 3.85
10 11 2.380941 TCGTGGATTCTTGTATCGGGA 58.619 47.619 0.00 0.00 0.00 5.14
11 12 2.864343 GTTCGTGGATTCTTGTATCGGG 59.136 50.000 0.00 0.00 0.00 5.14
12 13 3.517602 TGTTCGTGGATTCTTGTATCGG 58.482 45.455 0.00 0.00 0.00 4.18
13 14 4.862574 TCTTGTTCGTGGATTCTTGTATCG 59.137 41.667 0.00 0.00 0.00 2.92
14 15 6.369065 ACTTCTTGTTCGTGGATTCTTGTATC 59.631 38.462 0.00 0.00 0.00 2.24
15 16 6.231211 ACTTCTTGTTCGTGGATTCTTGTAT 58.769 36.000 0.00 0.00 0.00 2.29
16 17 5.607477 ACTTCTTGTTCGTGGATTCTTGTA 58.393 37.500 0.00 0.00 0.00 2.41
17 18 4.451900 ACTTCTTGTTCGTGGATTCTTGT 58.548 39.130 0.00 0.00 0.00 3.16
18 19 5.696724 AGTACTTCTTGTTCGTGGATTCTTG 59.303 40.000 0.00 0.00 0.00 3.02
19 20 5.855045 AGTACTTCTTGTTCGTGGATTCTT 58.145 37.500 0.00 0.00 0.00 2.52
20 21 5.470047 AGTACTTCTTGTTCGTGGATTCT 57.530 39.130 0.00 0.00 0.00 2.40
21 22 5.916969 CAAGTACTTCTTGTTCGTGGATTC 58.083 41.667 4.77 0.00 45.89 2.52
22 23 5.924475 CAAGTACTTCTTGTTCGTGGATT 57.076 39.130 4.77 0.00 45.89 3.01
33 34 9.614792 ATGTACTTTGTCTTTCAAGTACTTCTT 57.385 29.630 18.32 4.00 39.06 2.52
34 35 9.046296 CATGTACTTTGTCTTTCAAGTACTTCT 57.954 33.333 18.32 5.67 39.06 2.85
35 36 9.042008 TCATGTACTTTGTCTTTCAAGTACTTC 57.958 33.333 18.32 0.00 39.06 3.01
36 37 8.958119 TCATGTACTTTGTCTTTCAAGTACTT 57.042 30.769 18.32 1.12 39.06 2.24
37 38 8.958119 TTCATGTACTTTGTCTTTCAAGTACT 57.042 30.769 18.32 0.00 39.06 2.73
57 58 6.200097 TCGTCGACCAAACATACATATTCATG 59.800 38.462 10.58 0.00 38.21 3.07
58 59 6.277605 TCGTCGACCAAACATACATATTCAT 58.722 36.000 10.58 0.00 0.00 2.57
59 60 5.652518 TCGTCGACCAAACATACATATTCA 58.347 37.500 10.58 0.00 0.00 2.57
60 61 6.764877 ATCGTCGACCAAACATACATATTC 57.235 37.500 10.58 0.00 0.00 1.75
61 62 7.924412 AGTTATCGTCGACCAAACATACATATT 59.076 33.333 18.79 0.37 0.00 1.28
62 63 7.431249 AGTTATCGTCGACCAAACATACATAT 58.569 34.615 18.79 0.91 0.00 1.78
63 64 6.798482 AGTTATCGTCGACCAAACATACATA 58.202 36.000 18.79 0.00 0.00 2.29
64 65 5.657474 AGTTATCGTCGACCAAACATACAT 58.343 37.500 18.79 1.98 0.00 2.29
65 66 5.063180 AGTTATCGTCGACCAAACATACA 57.937 39.130 18.79 0.00 0.00 2.29
66 67 5.803967 AGAAGTTATCGTCGACCAAACATAC 59.196 40.000 18.79 11.81 0.00 2.39
67 68 5.803461 CAGAAGTTATCGTCGACCAAACATA 59.197 40.000 18.79 4.26 0.00 2.29
68 69 4.625742 CAGAAGTTATCGTCGACCAAACAT 59.374 41.667 18.79 10.77 0.00 2.71
69 70 3.985279 CAGAAGTTATCGTCGACCAAACA 59.015 43.478 18.79 0.00 0.00 2.83
70 71 3.985925 ACAGAAGTTATCGTCGACCAAAC 59.014 43.478 10.58 11.54 0.00 2.93
71 72 4.022589 AGACAGAAGTTATCGTCGACCAAA 60.023 41.667 10.58 0.00 36.97 3.28
72 73 3.504906 AGACAGAAGTTATCGTCGACCAA 59.495 43.478 10.58 0.00 36.97 3.67
73 74 3.079578 AGACAGAAGTTATCGTCGACCA 58.920 45.455 10.58 0.00 36.97 4.02
74 75 3.427243 CAGACAGAAGTTATCGTCGACC 58.573 50.000 10.58 0.00 36.97 4.79
75 76 3.126514 TCCAGACAGAAGTTATCGTCGAC 59.873 47.826 5.18 5.18 36.97 4.20
76 77 3.126514 GTCCAGACAGAAGTTATCGTCGA 59.873 47.826 0.00 0.00 36.97 4.20
77 78 3.127203 AGTCCAGACAGAAGTTATCGTCG 59.873 47.826 0.00 0.00 36.97 5.12
78 79 4.705337 AGTCCAGACAGAAGTTATCGTC 57.295 45.455 0.00 0.00 34.15 4.20
79 80 5.944599 TCTTAGTCCAGACAGAAGTTATCGT 59.055 40.000 0.00 0.00 32.03 3.73
80 81 6.094325 ACTCTTAGTCCAGACAGAAGTTATCG 59.906 42.308 0.00 0.00 32.03 2.92
81 82 7.094118 ACACTCTTAGTCCAGACAGAAGTTATC 60.094 40.741 0.00 0.00 32.03 1.75
82 83 6.722129 ACACTCTTAGTCCAGACAGAAGTTAT 59.278 38.462 0.00 0.00 32.03 1.89
83 84 6.016192 CACACTCTTAGTCCAGACAGAAGTTA 60.016 42.308 0.00 0.00 32.03 2.24
84 85 4.896482 ACACTCTTAGTCCAGACAGAAGTT 59.104 41.667 0.00 0.00 32.03 2.66
85 86 4.279671 CACACTCTTAGTCCAGACAGAAGT 59.720 45.833 0.00 0.00 32.03 3.01
86 87 4.279671 ACACACTCTTAGTCCAGACAGAAG 59.720 45.833 0.00 3.73 0.00 2.85
87 88 4.215908 ACACACTCTTAGTCCAGACAGAA 58.784 43.478 0.00 0.00 0.00 3.02
88 89 3.833732 ACACACTCTTAGTCCAGACAGA 58.166 45.455 0.00 0.00 0.00 3.41
89 90 4.519350 TGTACACACTCTTAGTCCAGACAG 59.481 45.833 0.00 0.00 0.00 3.51
90 91 4.466827 TGTACACACTCTTAGTCCAGACA 58.533 43.478 0.00 0.00 0.00 3.41
91 92 5.221130 GTTGTACACACTCTTAGTCCAGAC 58.779 45.833 0.00 0.00 0.00 3.51
92 93 4.023450 CGTTGTACACACTCTTAGTCCAGA 60.023 45.833 0.00 0.00 0.00 3.86
93 94 4.023450 TCGTTGTACACACTCTTAGTCCAG 60.023 45.833 0.00 0.00 0.00 3.86
94 95 3.884693 TCGTTGTACACACTCTTAGTCCA 59.115 43.478 0.00 0.00 0.00 4.02
95 96 4.494350 TCGTTGTACACACTCTTAGTCC 57.506 45.455 0.00 0.00 0.00 3.85
96 97 8.584600 CATTAATCGTTGTACACACTCTTAGTC 58.415 37.037 0.00 0.00 0.00 2.59
97 98 7.544566 CCATTAATCGTTGTACACACTCTTAGT 59.455 37.037 0.00 0.00 0.00 2.24
98 99 7.758076 TCCATTAATCGTTGTACACACTCTTAG 59.242 37.037 0.00 0.00 0.00 2.18
99 100 7.604549 TCCATTAATCGTTGTACACACTCTTA 58.395 34.615 0.00 0.00 0.00 2.10
100 101 6.460781 TCCATTAATCGTTGTACACACTCTT 58.539 36.000 0.00 0.00 0.00 2.85
101 102 6.032956 TCCATTAATCGTTGTACACACTCT 57.967 37.500 0.00 0.00 0.00 3.24
102 103 6.533723 TCATCCATTAATCGTTGTACACACTC 59.466 38.462 0.00 0.00 0.00 3.51
103 104 6.403049 TCATCCATTAATCGTTGTACACACT 58.597 36.000 0.00 0.00 0.00 3.55
104 105 6.312918 ACTCATCCATTAATCGTTGTACACAC 59.687 38.462 0.00 0.00 0.00 3.82
105 106 6.403049 ACTCATCCATTAATCGTTGTACACA 58.597 36.000 0.00 0.00 0.00 3.72
106 107 6.903883 ACTCATCCATTAATCGTTGTACAC 57.096 37.500 0.00 0.00 0.00 2.90
107 108 9.607988 AATTACTCATCCATTAATCGTTGTACA 57.392 29.630 0.00 0.00 0.00 2.90
152 153 9.784680 GCTCATGATGGTCATATCAAATTAATC 57.215 33.333 0.00 0.00 40.21 1.75
153 154 9.529823 AGCTCATGATGGTCATATCAAATTAAT 57.470 29.630 0.00 0.00 40.21 1.40
154 155 8.929260 AGCTCATGATGGTCATATCAAATTAA 57.071 30.769 0.00 0.00 40.21 1.40
155 156 8.380867 AGAGCTCATGATGGTCATATCAAATTA 58.619 33.333 17.77 0.00 40.21 1.40
156 157 7.232188 AGAGCTCATGATGGTCATATCAAATT 58.768 34.615 17.77 0.00 40.21 1.82
157 158 6.780901 AGAGCTCATGATGGTCATATCAAAT 58.219 36.000 17.77 0.00 40.21 2.32
158 159 6.183810 AGAGCTCATGATGGTCATATCAAA 57.816 37.500 17.77 0.00 40.21 2.69
159 160 5.820404 AGAGCTCATGATGGTCATATCAA 57.180 39.130 17.77 0.00 40.21 2.57
160 161 5.820404 AAGAGCTCATGATGGTCATATCA 57.180 39.130 17.77 0.00 41.00 2.15
161 162 6.339730 CCTAAGAGCTCATGATGGTCATATC 58.660 44.000 17.77 0.00 34.28 1.63
162 163 5.189342 CCCTAAGAGCTCATGATGGTCATAT 59.811 44.000 17.77 11.54 34.28 1.78
163 164 4.529769 CCCTAAGAGCTCATGATGGTCATA 59.470 45.833 17.77 13.77 34.28 2.15
164 165 3.327172 CCCTAAGAGCTCATGATGGTCAT 59.673 47.826 17.77 13.48 37.65 3.06
165 166 2.702478 CCCTAAGAGCTCATGATGGTCA 59.298 50.000 17.77 5.99 34.73 4.02
166 167 2.549778 GCCCTAAGAGCTCATGATGGTC 60.550 54.545 17.77 13.26 0.00 4.02
167 168 1.419387 GCCCTAAGAGCTCATGATGGT 59.581 52.381 17.77 0.00 0.00 3.55
168 169 1.419012 TGCCCTAAGAGCTCATGATGG 59.581 52.381 17.77 10.44 0.00 3.51
169 170 2.924757 TGCCCTAAGAGCTCATGATG 57.075 50.000 17.77 2.27 0.00 3.07
170 171 3.249752 AGATGCCCTAAGAGCTCATGAT 58.750 45.455 17.77 1.41 0.00 2.45
171 172 2.632028 GAGATGCCCTAAGAGCTCATGA 59.368 50.000 17.77 0.00 0.00 3.07
172 173 2.633967 AGAGATGCCCTAAGAGCTCATG 59.366 50.000 17.77 5.08 0.00 3.07
173 174 2.975075 AGAGATGCCCTAAGAGCTCAT 58.025 47.619 17.77 6.59 0.00 2.90
174 175 2.468301 AGAGATGCCCTAAGAGCTCA 57.532 50.000 17.77 0.00 0.00 4.26
175 176 3.639094 TGTTAGAGATGCCCTAAGAGCTC 59.361 47.826 5.27 5.27 0.00 4.09
176 177 3.640967 CTGTTAGAGATGCCCTAAGAGCT 59.359 47.826 0.00 0.00 32.99 4.09
177 178 3.386402 ACTGTTAGAGATGCCCTAAGAGC 59.614 47.826 0.00 0.00 39.62 4.09
178 179 5.105146 ACAACTGTTAGAGATGCCCTAAGAG 60.105 44.000 0.00 0.00 40.92 2.85
179 180 4.777896 ACAACTGTTAGAGATGCCCTAAGA 59.222 41.667 0.00 0.00 0.00 2.10
180 181 5.091261 ACAACTGTTAGAGATGCCCTAAG 57.909 43.478 0.00 0.00 0.00 2.18
181 182 6.382859 TCATACAACTGTTAGAGATGCCCTAA 59.617 38.462 0.00 0.00 0.00 2.69
182 183 5.897250 TCATACAACTGTTAGAGATGCCCTA 59.103 40.000 0.00 0.00 0.00 3.53
183 184 4.716784 TCATACAACTGTTAGAGATGCCCT 59.283 41.667 0.00 0.00 0.00 5.19
184 185 5.023533 TCATACAACTGTTAGAGATGCCC 57.976 43.478 0.00 0.00 0.00 5.36
185 186 6.283694 TGATCATACAACTGTTAGAGATGCC 58.716 40.000 0.00 0.00 0.00 4.40
186 187 7.959689 ATGATCATACAACTGTTAGAGATGC 57.040 36.000 6.36 0.00 0.00 3.91
187 188 9.322773 ACAATGATCATACAACTGTTAGAGATG 57.677 33.333 9.04 0.08 0.00 2.90
188 189 9.896645 AACAATGATCATACAACTGTTAGAGAT 57.103 29.630 17.20 0.00 32.28 2.75
189 190 9.154847 CAACAATGATCATACAACTGTTAGAGA 57.845 33.333 17.92 0.00 32.56 3.10
190 191 8.393366 CCAACAATGATCATACAACTGTTAGAG 58.607 37.037 17.92 9.40 32.56 2.43
191 192 7.882791 ACCAACAATGATCATACAACTGTTAGA 59.117 33.333 17.92 0.00 32.56 2.10
192 193 8.044060 ACCAACAATGATCATACAACTGTTAG 57.956 34.615 17.92 14.67 32.56 2.34
193 194 7.994425 ACCAACAATGATCATACAACTGTTA 57.006 32.000 17.92 0.00 32.56 2.41
194 195 6.899393 ACCAACAATGATCATACAACTGTT 57.101 33.333 9.04 12.26 33.39 3.16
195 196 7.994425 TTACCAACAATGATCATACAACTGT 57.006 32.000 9.04 6.39 0.00 3.55
196 197 8.514594 ACTTTACCAACAATGATCATACAACTG 58.485 33.333 9.04 5.70 0.00 3.16
197 198 8.635765 ACTTTACCAACAATGATCATACAACT 57.364 30.769 9.04 0.00 0.00 3.16
198 199 9.128107 CAACTTTACCAACAATGATCATACAAC 57.872 33.333 9.04 0.00 0.00 3.32
199 200 7.812191 GCAACTTTACCAACAATGATCATACAA 59.188 33.333 9.04 0.00 0.00 2.41
200 201 7.312154 GCAACTTTACCAACAATGATCATACA 58.688 34.615 9.04 0.00 0.00 2.29
201 202 6.751888 GGCAACTTTACCAACAATGATCATAC 59.248 38.462 9.04 0.00 0.00 2.39
202 203 6.435591 TGGCAACTTTACCAACAATGATCATA 59.564 34.615 9.04 0.00 31.46 2.15
203 204 5.245751 TGGCAACTTTACCAACAATGATCAT 59.754 36.000 1.18 1.18 31.46 2.45
204 205 4.586421 TGGCAACTTTACCAACAATGATCA 59.414 37.500 0.00 0.00 31.46 2.92
205 206 4.923281 GTGGCAACTTTACCAACAATGATC 59.077 41.667 0.00 0.00 37.79 2.92
206 207 4.262420 GGTGGCAACTTTACCAACAATGAT 60.262 41.667 0.00 0.00 43.52 2.45
207 208 3.068873 GGTGGCAACTTTACCAACAATGA 59.931 43.478 0.00 0.00 43.52 2.57
208 209 3.069443 AGGTGGCAACTTTACCAACAATG 59.931 43.478 0.00 0.00 46.66 2.82
209 210 3.304829 AGGTGGCAACTTTACCAACAAT 58.695 40.909 0.00 0.00 46.66 2.71
210 211 2.741145 AGGTGGCAACTTTACCAACAA 58.259 42.857 0.00 0.00 46.66 2.83
211 212 2.445682 AGGTGGCAACTTTACCAACA 57.554 45.000 0.00 0.00 46.66 3.33
212 213 3.501062 GTCTAGGTGGCAACTTTACCAAC 59.499 47.826 11.85 0.00 44.45 3.77
213 214 3.393278 AGTCTAGGTGGCAACTTTACCAA 59.607 43.478 11.85 0.00 37.79 3.67
214 215 2.976882 AGTCTAGGTGGCAACTTTACCA 59.023 45.455 11.85 0.00 36.94 3.25
215 216 3.697619 AGTCTAGGTGGCAACTTTACC 57.302 47.619 11.85 0.00 37.61 2.85
216 217 7.389607 TCAAAATAGTCTAGGTGGCAACTTTAC 59.610 37.037 11.85 9.73 37.61 2.01
217 218 7.455058 TCAAAATAGTCTAGGTGGCAACTTTA 58.545 34.615 11.85 0.00 37.61 1.85
218 219 6.303839 TCAAAATAGTCTAGGTGGCAACTTT 58.696 36.000 11.85 0.00 37.61 2.66
219 220 5.876357 TCAAAATAGTCTAGGTGGCAACTT 58.124 37.500 11.85 0.00 37.61 2.66
220 221 5.499004 TCAAAATAGTCTAGGTGGCAACT 57.501 39.130 11.18 11.18 37.61 3.16
221 222 5.880332 TCATCAAAATAGTCTAGGTGGCAAC 59.120 40.000 0.00 0.00 0.00 4.17
222 223 5.880332 GTCATCAAAATAGTCTAGGTGGCAA 59.120 40.000 0.00 0.00 0.00 4.52
223 224 5.045942 TGTCATCAAAATAGTCTAGGTGGCA 60.046 40.000 0.00 0.00 0.00 4.92
224 225 5.428253 TGTCATCAAAATAGTCTAGGTGGC 58.572 41.667 0.00 0.00 0.00 5.01
225 226 6.484643 CCATGTCATCAAAATAGTCTAGGTGG 59.515 42.308 0.00 0.00 0.00 4.61
226 227 6.017605 GCCATGTCATCAAAATAGTCTAGGTG 60.018 42.308 0.00 0.00 0.00 4.00
227 228 6.058183 GCCATGTCATCAAAATAGTCTAGGT 58.942 40.000 0.00 0.00 0.00 3.08
228 229 6.017605 GTGCCATGTCATCAAAATAGTCTAGG 60.018 42.308 0.00 0.00 0.00 3.02
229 230 6.539826 TGTGCCATGTCATCAAAATAGTCTAG 59.460 38.462 0.00 0.00 0.00 2.43
230 231 6.413892 TGTGCCATGTCATCAAAATAGTCTA 58.586 36.000 0.00 0.00 0.00 2.59
231 232 5.255687 TGTGCCATGTCATCAAAATAGTCT 58.744 37.500 0.00 0.00 0.00 3.24
232 233 5.565592 TGTGCCATGTCATCAAAATAGTC 57.434 39.130 0.00 0.00 0.00 2.59
233 234 7.643569 TTATGTGCCATGTCATCAAAATAGT 57.356 32.000 0.00 0.00 0.00 2.12
236 237 9.887629 TTTTATTATGTGCCATGTCATCAAAAT 57.112 25.926 0.00 0.00 0.00 1.82
237 238 9.368674 CTTTTATTATGTGCCATGTCATCAAAA 57.631 29.630 0.00 2.39 0.00 2.44
238 239 8.747471 TCTTTTATTATGTGCCATGTCATCAAA 58.253 29.630 0.00 0.00 0.00 2.69
239 240 8.291191 TCTTTTATTATGTGCCATGTCATCAA 57.709 30.769 0.00 0.00 0.00 2.57
240 241 7.878547 TCTTTTATTATGTGCCATGTCATCA 57.121 32.000 0.00 0.00 0.00 3.07
241 242 8.623903 TCTTCTTTTATTATGTGCCATGTCATC 58.376 33.333 0.00 0.00 0.00 2.92
242 243 8.523915 TCTTCTTTTATTATGTGCCATGTCAT 57.476 30.769 0.00 0.00 0.00 3.06
243 244 7.828717 TCTCTTCTTTTATTATGTGCCATGTCA 59.171 33.333 0.00 0.00 0.00 3.58
244 245 8.213518 TCTCTTCTTTTATTATGTGCCATGTC 57.786 34.615 0.00 0.00 0.00 3.06
245 246 8.049117 TCTCTCTTCTTTTATTATGTGCCATGT 58.951 33.333 0.00 0.00 0.00 3.21
246 247 8.442632 TCTCTCTTCTTTTATTATGTGCCATG 57.557 34.615 0.00 0.00 0.00 3.66
247 248 8.489489 TCTCTCTCTTCTTTTATTATGTGCCAT 58.511 33.333 0.00 0.00 0.00 4.40
248 249 7.851228 TCTCTCTCTTCTTTTATTATGTGCCA 58.149 34.615 0.00 0.00 0.00 4.92
249 250 8.608317 GTTCTCTCTCTTCTTTTATTATGTGCC 58.392 37.037 0.00 0.00 0.00 5.01
250 251 8.324567 CGTTCTCTCTCTTCTTTTATTATGTGC 58.675 37.037 0.00 0.00 0.00 4.57
251 252 9.574458 TCGTTCTCTCTCTTCTTTTATTATGTG 57.426 33.333 0.00 0.00 0.00 3.21
255 256 9.420551 GGTTTCGTTCTCTCTCTTCTTTTATTA 57.579 33.333 0.00 0.00 0.00 0.98
256 257 7.116519 CGGTTTCGTTCTCTCTCTTCTTTTATT 59.883 37.037 0.00 0.00 0.00 1.40
257 258 6.586844 CGGTTTCGTTCTCTCTCTTCTTTTAT 59.413 38.462 0.00 0.00 0.00 1.40
258 259 5.919141 CGGTTTCGTTCTCTCTCTTCTTTTA 59.081 40.000 0.00 0.00 0.00 1.52
259 260 4.745620 CGGTTTCGTTCTCTCTCTTCTTTT 59.254 41.667 0.00 0.00 0.00 2.27
260 261 4.299978 CGGTTTCGTTCTCTCTCTTCTTT 58.700 43.478 0.00 0.00 0.00 2.52
261 262 3.903360 CGGTTTCGTTCTCTCTCTTCTT 58.097 45.455 0.00 0.00 0.00 2.52
262 263 3.562567 CGGTTTCGTTCTCTCTCTTCT 57.437 47.619 0.00 0.00 0.00 2.85
275 276 2.093783 GCTTCAGGTTCATACGGTTTCG 59.906 50.000 0.00 0.00 43.02 3.46
276 277 3.071479 TGCTTCAGGTTCATACGGTTTC 58.929 45.455 0.00 0.00 0.00 2.78
277 278 3.134574 TGCTTCAGGTTCATACGGTTT 57.865 42.857 0.00 0.00 0.00 3.27
278 279 2.812011 GTTGCTTCAGGTTCATACGGTT 59.188 45.455 0.00 0.00 0.00 4.44
279 280 2.423577 GTTGCTTCAGGTTCATACGGT 58.576 47.619 0.00 0.00 0.00 4.83
280 281 1.393539 CGTTGCTTCAGGTTCATACGG 59.606 52.381 0.00 0.00 0.00 4.02
281 282 1.201921 GCGTTGCTTCAGGTTCATACG 60.202 52.381 0.00 0.00 0.00 3.06
282 283 2.076863 AGCGTTGCTTCAGGTTCATAC 58.923 47.619 0.00 0.00 33.89 2.39
283 284 2.346803 GAGCGTTGCTTCAGGTTCATA 58.653 47.619 0.00 0.00 39.88 2.15
284 285 1.160137 GAGCGTTGCTTCAGGTTCAT 58.840 50.000 0.00 0.00 39.88 2.57
285 286 0.884704 GGAGCGTTGCTTCAGGTTCA 60.885 55.000 0.00 0.00 39.88 3.18
286 287 0.884704 TGGAGCGTTGCTTCAGGTTC 60.885 55.000 0.00 0.00 39.52 3.62
287 288 1.148273 TGGAGCGTTGCTTCAGGTT 59.852 52.632 0.00 0.00 39.52 3.50
288 289 2.828868 TGGAGCGTTGCTTCAGGT 59.171 55.556 0.00 0.00 39.52 4.00
300 301 2.758089 CGGAGCTTGTGCATGGAGC 61.758 63.158 9.98 9.98 42.74 4.70
301 302 1.078918 TCGGAGCTTGTGCATGGAG 60.079 57.895 0.00 0.00 42.74 3.86
302 303 1.078918 CTCGGAGCTTGTGCATGGA 60.079 57.895 0.00 0.00 42.74 3.41
303 304 2.110967 CCTCGGAGCTTGTGCATGG 61.111 63.158 0.00 0.00 42.74 3.66
304 305 2.758089 GCCTCGGAGCTTGTGCATG 61.758 63.158 0.00 0.00 42.74 4.06
305 306 2.437359 GCCTCGGAGCTTGTGCAT 60.437 61.111 0.00 0.00 42.74 3.96
306 307 3.474486 TTGCCTCGGAGCTTGTGCA 62.474 57.895 0.00 0.42 42.74 4.57
307 308 2.669569 TTGCCTCGGAGCTTGTGC 60.670 61.111 0.00 0.00 40.05 4.57
308 309 2.684843 GCTTGCCTCGGAGCTTGTG 61.685 63.158 0.00 0.00 36.01 3.33
309 310 2.359230 GCTTGCCTCGGAGCTTGT 60.359 61.111 0.00 0.00 36.01 3.16
310 311 3.130160 GGCTTGCCTCGGAGCTTG 61.130 66.667 4.11 0.00 38.89 4.01
311 312 4.416738 GGGCTTGCCTCGGAGCTT 62.417 66.667 11.71 0.00 38.89 3.74
314 315 4.821589 GACGGGCTTGCCTCGGAG 62.822 72.222 20.35 0.00 0.00 4.63
317 318 3.976701 AATGGACGGGCTTGCCTCG 62.977 63.158 11.71 14.67 0.00 4.63
318 319 1.657751 GAAATGGACGGGCTTGCCTC 61.658 60.000 11.71 2.09 0.00 4.70
319 320 1.678970 GAAATGGACGGGCTTGCCT 60.679 57.895 11.71 0.00 0.00 4.75
320 321 1.250840 AAGAAATGGACGGGCTTGCC 61.251 55.000 2.49 2.49 0.00 4.52
321 322 0.171231 GAAGAAATGGACGGGCTTGC 59.829 55.000 0.00 0.00 0.00 4.01
322 323 1.533625 TGAAGAAATGGACGGGCTTG 58.466 50.000 0.00 0.00 0.00 4.01
323 324 1.886542 GTTGAAGAAATGGACGGGCTT 59.113 47.619 0.00 0.00 0.00 4.35
324 325 1.202879 TGTTGAAGAAATGGACGGGCT 60.203 47.619 0.00 0.00 0.00 5.19
325 326 1.243902 TGTTGAAGAAATGGACGGGC 58.756 50.000 0.00 0.00 0.00 6.13
326 327 4.519540 AAATGTTGAAGAAATGGACGGG 57.480 40.909 0.00 0.00 0.00 5.28
327 328 6.086222 CACTAAATGTTGAAGAAATGGACGG 58.914 40.000 0.00 0.00 0.00 4.79
328 329 6.072728 TCCACTAAATGTTGAAGAAATGGACG 60.073 38.462 0.00 0.00 0.00 4.79
329 330 7.084486 GTCCACTAAATGTTGAAGAAATGGAC 58.916 38.462 0.00 0.00 43.90 4.02
330 331 6.208599 GGTCCACTAAATGTTGAAGAAATGGA 59.791 38.462 0.00 0.00 0.00 3.41
331 332 6.389906 GGTCCACTAAATGTTGAAGAAATGG 58.610 40.000 0.00 0.00 0.00 3.16
332 333 6.015519 TGGGTCCACTAAATGTTGAAGAAATG 60.016 38.462 0.00 0.00 0.00 2.32
333 334 6.074648 TGGGTCCACTAAATGTTGAAGAAAT 58.925 36.000 0.00 0.00 0.00 2.17
334 335 5.450453 TGGGTCCACTAAATGTTGAAGAAA 58.550 37.500 0.00 0.00 0.00 2.52
335 336 5.055265 TGGGTCCACTAAATGTTGAAGAA 57.945 39.130 0.00 0.00 0.00 2.52
336 337 4.715534 TGGGTCCACTAAATGTTGAAGA 57.284 40.909 0.00 0.00 0.00 2.87
337 338 5.256474 AGATGGGTCCACTAAATGTTGAAG 58.744 41.667 0.00 0.00 0.00 3.02
338 339 5.255397 AGATGGGTCCACTAAATGTTGAA 57.745 39.130 0.00 0.00 0.00 2.69
339 340 4.927267 AGATGGGTCCACTAAATGTTGA 57.073 40.909 0.00 0.00 0.00 3.18
340 341 5.745227 ACTAGATGGGTCCACTAAATGTTG 58.255 41.667 0.00 0.00 0.00 3.33
341 342 6.388619 AACTAGATGGGTCCACTAAATGTT 57.611 37.500 0.00 0.00 0.00 2.71
342 343 7.691993 ATAACTAGATGGGTCCACTAAATGT 57.308 36.000 0.00 0.00 0.00 2.71
343 344 8.980481 AAATAACTAGATGGGTCCACTAAATG 57.020 34.615 0.00 0.00 0.00 2.32
345 346 9.895138 GTTAAATAACTAGATGGGTCCACTAAA 57.105 33.333 0.00 0.00 33.52 1.85
346 347 9.049050 TGTTAAATAACTAGATGGGTCCACTAA 57.951 33.333 0.00 0.00 37.12 2.24
347 348 8.612486 TGTTAAATAACTAGATGGGTCCACTA 57.388 34.615 0.00 0.00 37.12 2.74
348 349 7.504926 TGTTAAATAACTAGATGGGTCCACT 57.495 36.000 0.00 0.00 37.12 4.00
349 350 9.269453 GTATGTTAAATAACTAGATGGGTCCAC 57.731 37.037 0.00 0.00 37.12 4.02
350 351 8.145767 CGTATGTTAAATAACTAGATGGGTCCA 58.854 37.037 0.00 0.00 37.12 4.02
351 352 7.117379 GCGTATGTTAAATAACTAGATGGGTCC 59.883 40.741 0.00 0.00 37.12 4.46
352 353 7.871463 AGCGTATGTTAAATAACTAGATGGGTC 59.129 37.037 0.00 0.00 37.12 4.46
353 354 7.732996 AGCGTATGTTAAATAACTAGATGGGT 58.267 34.615 0.00 0.00 37.12 4.51
354 355 8.603242 AAGCGTATGTTAAATAACTAGATGGG 57.397 34.615 0.00 0.00 37.12 4.00
364 365 9.734620 AGACGTATGTTAAGCGTATGTTAAATA 57.265 29.630 0.00 0.00 38.53 1.40
365 366 8.638685 AGACGTATGTTAAGCGTATGTTAAAT 57.361 30.769 0.00 0.00 38.53 1.40
366 367 9.566530 TTAGACGTATGTTAAGCGTATGTTAAA 57.433 29.630 0.00 0.00 38.53 1.52
367 368 9.734620 ATTAGACGTATGTTAAGCGTATGTTAA 57.265 29.630 0.00 0.00 38.53 2.01
368 369 9.734620 AATTAGACGTATGTTAAGCGTATGTTA 57.265 29.630 0.00 0.00 38.53 2.41
369 370 8.537223 CAATTAGACGTATGTTAAGCGTATGTT 58.463 33.333 0.00 0.00 38.53 2.71
370 371 7.916977 TCAATTAGACGTATGTTAAGCGTATGT 59.083 33.333 0.00 0.00 40.47 2.29
371 372 8.277270 TCAATTAGACGTATGTTAAGCGTATG 57.723 34.615 0.00 0.00 39.06 2.39
372 373 8.861033 TTCAATTAGACGTATGTTAAGCGTAT 57.139 30.769 0.00 0.00 39.06 3.06
373 374 8.183536 TCTTCAATTAGACGTATGTTAAGCGTA 58.816 33.333 0.00 0.00 39.06 4.42
374 375 7.031372 TCTTCAATTAGACGTATGTTAAGCGT 58.969 34.615 0.00 0.00 41.81 5.07
375 376 7.220300 ACTCTTCAATTAGACGTATGTTAAGCG 59.780 37.037 0.00 0.00 0.00 4.68
376 377 8.408743 ACTCTTCAATTAGACGTATGTTAAGC 57.591 34.615 0.00 0.00 0.00 3.09
377 378 9.790389 AGACTCTTCAATTAGACGTATGTTAAG 57.210 33.333 0.00 0.00 0.00 1.85
391 392 9.896645 ACAACACATCATATAGACTCTTCAATT 57.103 29.630 0.00 0.00 0.00 2.32
392 393 9.896645 AACAACACATCATATAGACTCTTCAAT 57.103 29.630 0.00 0.00 0.00 2.57
393 394 9.154847 CAACAACACATCATATAGACTCTTCAA 57.845 33.333 0.00 0.00 0.00 2.69
394 395 7.765819 CCAACAACACATCATATAGACTCTTCA 59.234 37.037 0.00 0.00 0.00 3.02
395 396 7.254590 GCCAACAACACATCATATAGACTCTTC 60.255 40.741 0.00 0.00 0.00 2.87
396 397 6.540189 GCCAACAACACATCATATAGACTCTT 59.460 38.462 0.00 0.00 0.00 2.85
397 398 6.051717 GCCAACAACACATCATATAGACTCT 58.948 40.000 0.00 0.00 0.00 3.24
398 399 6.018425 CAGCCAACAACACATCATATAGACTC 60.018 42.308 0.00 0.00 0.00 3.36
399 400 5.819379 CAGCCAACAACACATCATATAGACT 59.181 40.000 0.00 0.00 0.00 3.24
400 401 5.504665 GCAGCCAACAACACATCATATAGAC 60.505 44.000 0.00 0.00 0.00 2.59
401 402 4.576053 GCAGCCAACAACACATCATATAGA 59.424 41.667 0.00 0.00 0.00 1.98
402 403 4.577693 AGCAGCCAACAACACATCATATAG 59.422 41.667 0.00 0.00 0.00 1.31
403 404 4.336153 CAGCAGCCAACAACACATCATATA 59.664 41.667 0.00 0.00 0.00 0.86
404 405 3.129813 CAGCAGCCAACAACACATCATAT 59.870 43.478 0.00 0.00 0.00 1.78
405 406 2.488937 CAGCAGCCAACAACACATCATA 59.511 45.455 0.00 0.00 0.00 2.15
406 407 1.271379 CAGCAGCCAACAACACATCAT 59.729 47.619 0.00 0.00 0.00 2.45
407 408 0.669619 CAGCAGCCAACAACACATCA 59.330 50.000 0.00 0.00 0.00 3.07
408 409 0.953727 TCAGCAGCCAACAACACATC 59.046 50.000 0.00 0.00 0.00 3.06
409 410 0.670162 GTCAGCAGCCAACAACACAT 59.330 50.000 0.00 0.00 0.00 3.21
410 411 1.713937 CGTCAGCAGCCAACAACACA 61.714 55.000 0.00 0.00 0.00 3.72
411 412 1.009675 CGTCAGCAGCCAACAACAC 60.010 57.895 0.00 0.00 0.00 3.32
412 413 1.451207 ACGTCAGCAGCCAACAACA 60.451 52.632 0.00 0.00 0.00 3.33
413 414 1.009675 CACGTCAGCAGCCAACAAC 60.010 57.895 0.00 0.00 0.00 3.32
414 415 2.186160 CCACGTCAGCAGCCAACAA 61.186 57.895 0.00 0.00 0.00 2.83
415 416 2.591429 CCACGTCAGCAGCCAACA 60.591 61.111 0.00 0.00 0.00 3.33
416 417 2.280797 TCCACGTCAGCAGCCAAC 60.281 61.111 0.00 0.00 0.00 3.77
417 418 2.280797 GTCCACGTCAGCAGCCAA 60.281 61.111 0.00 0.00 0.00 4.52
418 419 3.545574 TGTCCACGTCAGCAGCCA 61.546 61.111 0.00 0.00 0.00 4.75
419 420 2.996168 AAGTGTCCACGTCAGCAGCC 62.996 60.000 0.00 0.00 36.20 4.85
420 421 0.319555 TAAGTGTCCACGTCAGCAGC 60.320 55.000 0.00 0.00 36.20 5.25
421 422 2.370281 ATAAGTGTCCACGTCAGCAG 57.630 50.000 0.00 0.00 36.20 4.24
422 423 2.094390 GGTATAAGTGTCCACGTCAGCA 60.094 50.000 0.00 0.00 36.20 4.41
423 424 2.094390 TGGTATAAGTGTCCACGTCAGC 60.094 50.000 0.00 0.00 36.20 4.26
424 425 3.861276 TGGTATAAGTGTCCACGTCAG 57.139 47.619 0.00 0.00 36.20 3.51
425 426 3.612241 CGTTGGTATAAGTGTCCACGTCA 60.612 47.826 0.00 0.00 36.20 4.35
426 427 2.919229 CGTTGGTATAAGTGTCCACGTC 59.081 50.000 0.00 0.00 36.20 4.34
427 428 2.557924 TCGTTGGTATAAGTGTCCACGT 59.442 45.455 0.00 0.00 36.20 4.49
428 429 3.220507 TCGTTGGTATAAGTGTCCACG 57.779 47.619 0.00 0.00 36.20 4.94
429 430 4.933400 ACAATCGTTGGTATAAGTGTCCAC 59.067 41.667 3.42 0.00 34.12 4.02
430 431 5.155278 ACAATCGTTGGTATAAGTGTCCA 57.845 39.130 3.42 0.00 34.12 4.02
431 432 6.101332 TGTACAATCGTTGGTATAAGTGTCC 58.899 40.000 0.00 0.00 34.12 4.02
432 433 7.766219 ATGTACAATCGTTGGTATAAGTGTC 57.234 36.000 0.00 0.00 34.12 3.67
439 440 9.826574 ACAGTTTATATGTACAATCGTTGGTAT 57.173 29.630 0.00 0.00 34.12 2.73
440 441 9.656040 AACAGTTTATATGTACAATCGTTGGTA 57.344 29.630 0.00 0.00 34.12 3.25
441 442 8.447833 CAACAGTTTATATGTACAATCGTTGGT 58.552 33.333 0.00 0.00 34.12 3.67
442 443 7.428183 GCAACAGTTTATATGTACAATCGTTGG 59.572 37.037 0.00 0.00 34.12 3.77
443 444 7.960195 TGCAACAGTTTATATGTACAATCGTTG 59.040 33.333 0.00 6.74 33.71 4.10
444 445 8.035165 TGCAACAGTTTATATGTACAATCGTT 57.965 30.769 0.00 0.00 0.00 3.85
445 446 7.547722 TCTGCAACAGTTTATATGTACAATCGT 59.452 33.333 0.00 0.00 32.61 3.73
446 447 7.905126 TCTGCAACAGTTTATATGTACAATCG 58.095 34.615 0.00 0.00 32.61 3.34
447 448 9.655769 CATCTGCAACAGTTTATATGTACAATC 57.344 33.333 0.00 0.00 32.61 2.67
448 449 8.131100 GCATCTGCAACAGTTTATATGTACAAT 58.869 33.333 0.00 0.00 41.59 2.71
449 450 7.336679 AGCATCTGCAACAGTTTATATGTACAA 59.663 33.333 0.00 0.00 45.16 2.41
450 451 6.823182 AGCATCTGCAACAGTTTATATGTACA 59.177 34.615 0.00 0.00 45.16 2.90
451 452 7.251704 AGCATCTGCAACAGTTTATATGTAC 57.748 36.000 4.79 0.00 45.16 2.90
452 453 7.482654 GAGCATCTGCAACAGTTTATATGTA 57.517 36.000 4.79 0.00 45.16 2.29
453 454 6.369059 GAGCATCTGCAACAGTTTATATGT 57.631 37.500 4.79 0.00 45.16 2.29
467 468 3.633665 GCCTTCAGCTAAGAGCATCTGC 61.634 54.545 0.64 0.00 45.56 4.26
468 469 2.211806 GCCTTCAGCTAAGAGCATCTG 58.788 52.381 0.64 0.00 45.56 2.90
469 470 1.202510 CGCCTTCAGCTAAGAGCATCT 60.203 52.381 0.64 0.00 45.56 2.90
470 471 1.216122 CGCCTTCAGCTAAGAGCATC 58.784 55.000 0.64 0.00 45.56 3.91
471 472 0.539051 ACGCCTTCAGCTAAGAGCAT 59.461 50.000 0.64 0.00 45.56 3.79
472 473 1.182667 TACGCCTTCAGCTAAGAGCA 58.817 50.000 0.64 0.00 45.56 4.26
473 474 2.517650 ATACGCCTTCAGCTAAGAGC 57.482 50.000 0.00 0.00 42.84 4.09
474 475 4.314740 AGAATACGCCTTCAGCTAAGAG 57.685 45.455 0.00 0.00 40.39 2.85
475 476 4.737855 AAGAATACGCCTTCAGCTAAGA 57.262 40.909 0.00 0.00 40.39 2.10
476 477 6.903883 TTAAAGAATACGCCTTCAGCTAAG 57.096 37.500 0.00 0.00 40.39 2.18
477 478 7.272978 AGATTAAAGAATACGCCTTCAGCTAA 58.727 34.615 0.00 0.00 40.39 3.09
478 479 6.817184 AGATTAAAGAATACGCCTTCAGCTA 58.183 36.000 0.00 0.00 40.39 3.32
479 480 5.675538 AGATTAAAGAATACGCCTTCAGCT 58.324 37.500 1.03 0.00 40.39 4.24
480 481 5.523916 TGAGATTAAAGAATACGCCTTCAGC 59.476 40.000 1.03 0.00 38.52 4.26
481 482 6.292596 GCTGAGATTAAAGAATACGCCTTCAG 60.293 42.308 1.03 0.00 0.00 3.02
482 483 5.523916 GCTGAGATTAAAGAATACGCCTTCA 59.476 40.000 1.03 0.00 0.00 3.02
483 484 5.050023 GGCTGAGATTAAAGAATACGCCTTC 60.050 44.000 0.00 0.00 0.00 3.46
484 485 4.816925 GGCTGAGATTAAAGAATACGCCTT 59.183 41.667 0.00 0.00 0.00 4.35
485 486 4.141711 TGGCTGAGATTAAAGAATACGCCT 60.142 41.667 0.00 0.00 35.02 5.52
486 487 4.127171 TGGCTGAGATTAAAGAATACGCC 58.873 43.478 0.00 0.00 0.00 5.68
487 488 5.931441 ATGGCTGAGATTAAAGAATACGC 57.069 39.130 0.00 0.00 0.00 4.42
488 489 7.482654 TGAATGGCTGAGATTAAAGAATACG 57.517 36.000 0.00 0.00 0.00 3.06
489 490 9.890352 GAATGAATGGCTGAGATTAAAGAATAC 57.110 33.333 0.00 0.00 0.00 1.89
490 491 9.631257 TGAATGAATGGCTGAGATTAAAGAATA 57.369 29.630 0.00 0.00 0.00 1.75
491 492 8.529424 TGAATGAATGGCTGAGATTAAAGAAT 57.471 30.769 0.00 0.00 0.00 2.40
492 493 7.943079 TGAATGAATGGCTGAGATTAAAGAA 57.057 32.000 0.00 0.00 0.00 2.52
493 494 7.943079 TTGAATGAATGGCTGAGATTAAAGA 57.057 32.000 0.00 0.00 0.00 2.52
497 498 9.631257 TCTTAATTGAATGAATGGCTGAGATTA 57.369 29.630 0.00 0.00 0.00 1.75
501 502 6.320672 ACCTCTTAATTGAATGAATGGCTGAG 59.679 38.462 0.00 0.00 0.00 3.35
511 512 8.279970 TCAATACACCACCTCTTAATTGAATG 57.720 34.615 0.00 0.00 31.06 2.67
548 549 3.495670 TTATTGGGTTGCGCATGTTAC 57.504 42.857 12.75 6.08 0.00 2.50
592 593 3.299340 TTCAGACTTTCAGTAGCCGAC 57.701 47.619 0.00 0.00 0.00 4.79
664 668 8.582891 ATCTAAATACAAGATCCCCTTTACCT 57.417 34.615 0.00 0.00 31.42 3.08
741 748 2.086869 GTGATGTGACATGAACCTGGG 58.913 52.381 1.23 0.00 0.00 4.45
805 822 8.686334 GCCATGGTTTCTGAATTTCTAAATCTA 58.314 33.333 14.67 0.00 0.00 1.98
806 823 7.364144 GGCCATGGTTTCTGAATTTCTAAATCT 60.364 37.037 14.67 0.00 0.00 2.40
807 824 6.758416 GGCCATGGTTTCTGAATTTCTAAATC 59.242 38.462 14.67 0.60 0.00 2.17
808 825 6.441604 AGGCCATGGTTTCTGAATTTCTAAAT 59.558 34.615 14.67 0.00 0.00 1.40
809 826 5.779771 AGGCCATGGTTTCTGAATTTCTAAA 59.220 36.000 14.67 0.00 0.00 1.85
881 898 1.981256 AATGACTGGAAAGTTGCGGT 58.019 45.000 0.00 0.00 41.05 5.68
884 901 6.803807 GTCTGAATAAATGACTGGAAAGTTGC 59.196 38.462 0.00 0.00 0.00 4.17
902 920 3.967326 TGGACGAATCCTATGGTCTGAAT 59.033 43.478 0.00 0.00 46.43 2.57
906 924 2.747177 TGTGGACGAATCCTATGGTCT 58.253 47.619 0.00 0.00 46.43 3.85
932 964 3.798202 AGGATATCGTGGTTGAAGAAGC 58.202 45.455 0.00 0.00 0.00 3.86
987 1034 6.143915 TGTAGTAGCCATAGGAGGAGAAAAT 58.856 40.000 0.00 0.00 0.00 1.82
994 1043 3.006323 CAGCTTGTAGTAGCCATAGGAGG 59.994 52.174 0.00 0.00 42.20 4.30
1143 1200 2.364970 CTCCCTGTCAGCTATCCAGAAG 59.635 54.545 7.76 2.73 0.00 2.85
1224 1281 0.827368 ATCCAGAGCTCCGGAGAAAC 59.173 55.000 35.69 22.56 33.97 2.78
1281 1347 1.668419 GCAGATTGCGGTCCTTGTAT 58.332 50.000 0.00 0.00 31.71 2.29
1446 2706 2.606519 TCCACTAGCGCCACCCTT 60.607 61.111 2.29 0.00 0.00 3.95
1458 2748 0.900182 TCACGCATCTCACCTCCACT 60.900 55.000 0.00 0.00 0.00 4.00
1482 2772 0.859788 CGCGAACAAACACGTTGCTT 60.860 50.000 0.00 0.00 41.31 3.91
1535 2825 2.516448 CCCTCCAAGGCATAGTCGA 58.484 57.895 0.00 0.00 32.73 4.20
1639 7342 0.918983 GGTGGATCCCATGTCAGGAA 59.081 55.000 9.90 0.00 36.85 3.36
1666 7369 1.349688 TGATTGGCCGGTGAACTTACT 59.650 47.619 1.90 0.00 0.00 2.24
1897 9132 6.172630 TGACTCAAGACAAAGCTAATATGCA 58.827 36.000 0.00 0.00 34.99 3.96
1907 9142 8.850452 GTTTACAAAGTTTGACTCAAGACAAAG 58.150 33.333 22.23 0.86 39.51 2.77
2098 9334 9.305925 CCGTTTTTCTTTACTCCGTATATTAGT 57.694 33.333 0.00 0.00 0.00 2.24
2145 9381 3.424962 GCTGGAGAAAATTCTACACGTGC 60.425 47.826 17.22 3.56 43.05 5.34
2156 9392 4.843728 TCTTACGGATTGCTGGAGAAAAT 58.156 39.130 0.00 0.00 0.00 1.82
2172 9408 6.055231 TGAAAGTGTGATTGGTTTCTTACG 57.945 37.500 0.00 0.00 31.46 3.18
2236 9472 6.127758 CCATAATTCAACCATCGAAAAGGTGA 60.128 38.462 8.14 2.70 38.37 4.02
2245 9481 6.494842 CCAACTAACCATAATTCAACCATCG 58.505 40.000 0.00 0.00 0.00 3.84
2259 9495 3.137544 CACCTATATGGGCCAACTAACCA 59.862 47.826 11.89 0.00 41.11 3.67
2264 9500 1.774856 GTCCACCTATATGGGCCAACT 59.225 52.381 11.89 2.86 38.52 3.16
2320 9556 1.178534 AAGGCGAACATGGGTTGTGG 61.179 55.000 0.00 0.00 38.99 4.17
2454 9692 5.187576 TGAATGGACATTTCTTTCATTCCCC 59.812 40.000 10.55 0.00 41.49 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.