Multiple sequence alignment - TraesCS3A01G032000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G032000 chr3A 100.000 8106 0 0 1 8106 17595076 17603181 0.000000e+00 14970.0
1 TraesCS3A01G032000 chr3A 98.605 1219 15 1 5457 6675 395551019 395549803 0.000000e+00 2156.0
2 TraesCS3A01G032000 chr3A 83.937 442 66 4 7667 8104 158163691 158163251 1.260000e-112 418.0
3 TraesCS3A01G032000 chr3A 92.308 169 12 1 488 656 238686208 238686375 1.050000e-58 239.0
4 TraesCS3A01G032000 chr3A 84.483 174 19 5 5457 5624 727996145 727995974 1.810000e-36 165.0
5 TraesCS3A01G032000 chr3D 92.816 3828 208 38 167 3960 10670268 10666474 0.000000e+00 5483.0
6 TraesCS3A01G032000 chr3D 87.847 864 80 6 6673 7529 10664895 10664050 0.000000e+00 990.0
7 TraesCS3A01G032000 chr3D 89.960 747 63 6 4722 5456 10665633 10664887 0.000000e+00 953.0
8 TraesCS3A01G032000 chr3D 91.438 619 46 6 3960 4574 10666244 10665629 0.000000e+00 843.0
9 TraesCS3A01G032000 chr3D 83.447 441 65 7 7667 8104 446115509 446115074 3.520000e-108 403.0
10 TraesCS3A01G032000 chr3D 95.833 192 6 2 2 191 10670604 10670413 7.900000e-80 309.0
11 TraesCS3A01G032000 chr3D 92.308 169 12 1 488 656 187836471 187836304 1.050000e-58 239.0
12 TraesCS3A01G032000 chr3D 92.216 167 10 3 487 652 421374429 421374593 4.890000e-57 233.0
13 TraesCS3A01G032000 chr3D 88.966 145 14 1 7528 7670 475553556 475553700 2.320000e-40 178.0
14 TraesCS3A01G032000 chr3B 91.960 2276 150 19 2311 4574 26525322 26527576 0.000000e+00 3158.0
15 TraesCS3A01G032000 chr3B 88.061 1650 126 25 651 2276 26523723 26525325 0.000000e+00 1890.0
16 TraesCS3A01G032000 chr3B 87.600 750 69 13 4719 5456 26527569 26528306 0.000000e+00 848.0
17 TraesCS3A01G032000 chr3B 87.258 722 59 12 6672 7381 26528297 26528997 0.000000e+00 793.0
18 TraesCS3A01G032000 chr3B 91.134 485 30 5 1 483 26523249 26523722 0.000000e+00 645.0
19 TraesCS3A01G032000 chr3B 94.326 141 8 0 4583 4723 228503163 228503023 4.930000e-52 217.0
20 TraesCS3A01G032000 chr5A 96.299 1243 21 12 5457 6674 35827217 35825975 0.000000e+00 2017.0
21 TraesCS3A01G032000 chr5A 84.615 260 37 3 5619 5875 310420437 310420178 1.040000e-63 255.0
22 TraesCS3A01G032000 chr5A 92.414 145 11 0 4583 4727 6212808 6212952 2.960000e-49 207.0
23 TraesCS3A01G032000 chr2A 91.347 1225 83 13 5453 6673 562883108 562884313 0.000000e+00 1653.0
24 TraesCS3A01G032000 chr2A 86.652 442 50 4 7667 8106 564613601 564614035 1.580000e-131 481.0
25 TraesCS3A01G032000 chr2A 93.056 144 10 0 4583 4726 385446556 385446413 2.290000e-50 211.0
26 TraesCS3A01G032000 chr2A 93.056 144 9 1 4583 4726 729554464 729554606 8.240000e-50 209.0
27 TraesCS3A01G032000 chr2A 88.112 143 16 1 7528 7670 564613434 564613575 1.400000e-37 169.0
28 TraesCS3A01G032000 chr7D 86.840 1117 78 29 5619 6674 447662770 447663878 0.000000e+00 1184.0
29 TraesCS3A01G032000 chr7D 85.250 400 57 2 7668 8066 561805845 561805447 2.110000e-110 411.0
30 TraesCS3A01G032000 chr7D 94.767 172 8 1 5457 5627 447662569 447662740 4.820000e-67 267.0
31 TraesCS3A01G032000 chr7D 92.857 168 9 3 488 654 397555079 397554914 2.920000e-59 241.0
32 TraesCS3A01G032000 chr7D 84.884 172 16 3 5457 5621 590824019 590823851 1.810000e-36 165.0
33 TraesCS3A01G032000 chr7D 88.462 130 13 2 7529 7657 469224891 469225019 1.090000e-33 156.0
34 TraesCS3A01G032000 chr2D 87.292 661 68 13 5731 6380 450877871 450877216 0.000000e+00 741.0
35 TraesCS3A01G032000 chr6D 86.387 382 45 6 7667 8044 82193861 82194239 2.110000e-110 411.0
36 TraesCS3A01G032000 chr6D 82.486 177 25 3 5457 5627 103043023 103043199 5.070000e-32 150.0
37 TraesCS3A01G032000 chr6A 83.521 443 67 6 7667 8106 11128177 11128616 7.570000e-110 409.0
38 TraesCS3A01G032000 chr6A 77.778 576 114 12 7531 8101 85576067 85575501 7.790000e-90 342.0
39 TraesCS3A01G032000 chr6A 93.706 143 9 0 4583 4725 262037200 262037342 1.770000e-51 215.0
40 TraesCS3A01G032000 chr6A 87.143 140 16 2 7531 7670 11128014 11128151 3.030000e-34 158.0
41 TraesCS3A01G032000 chr6A 83.146 178 20 7 5457 5627 93165301 93165475 3.920000e-33 154.0
42 TraesCS3A01G032000 chr7B 79.754 568 93 12 7557 8106 687549218 687549781 7.630000e-105 392.0
43 TraesCS3A01G032000 chr7B 92.814 167 11 1 490 656 102234478 102234313 2.920000e-59 241.0
44 TraesCS3A01G032000 chr4D 83.028 436 69 5 7673 8106 505724851 505724419 2.740000e-104 390.0
45 TraesCS3A01G032000 chr4D 92.045 176 13 1 490 665 326382448 326382622 6.280000e-61 246.0
46 TraesCS3A01G032000 chr4D 82.759 116 12 7 2399 2509 45986008 45985896 6.700000e-16 97.1
47 TraesCS3A01G032000 chr2B 83.178 428 69 3 5619 6043 138737218 138737645 9.870000e-104 388.0
48 TraesCS3A01G032000 chr4A 85.771 253 33 3 5619 5868 639246944 639247196 1.730000e-66 265.0
49 TraesCS3A01G032000 chr4A 92.157 153 9 3 4583 4733 585399521 585399370 6.370000e-51 213.0
50 TraesCS3A01G032000 chr4A 84.000 175 20 5 5457 5625 744390695 744390523 2.340000e-35 161.0
51 TraesCS3A01G032000 chr7A 75.377 597 102 35 7520 8101 663495482 663496048 6.280000e-61 246.0
52 TraesCS3A01G032000 chr7A 91.716 169 13 1 490 658 494786829 494786996 4.890000e-57 233.0
53 TraesCS3A01G032000 chr7A 92.414 145 11 0 4583 4727 459178854 459178998 2.960000e-49 207.0
54 TraesCS3A01G032000 chr1A 90.341 176 15 2 481 655 441240743 441240917 6.330000e-56 230.0
55 TraesCS3A01G032000 chr1A 94.203 138 8 0 4583 4720 515191101 515191238 2.290000e-50 211.0
56 TraesCS3A01G032000 chr1D 84.016 244 32 5 5634 5870 81069194 81068951 2.280000e-55 228.0
57 TraesCS3A01G032000 chrUn 94.245 139 8 0 4581 4719 310882968 310883106 6.370000e-51 213.0
58 TraesCS3A01G032000 chrUn 86.429 140 17 2 7531 7670 315895590 315895453 1.410000e-32 152.0
59 TraesCS3A01G032000 chrUn 86.429 140 17 2 7531 7670 315906417 315906280 1.410000e-32 152.0
60 TraesCS3A01G032000 chrUn 86.429 140 17 2 7531 7670 323249134 323249271 1.410000e-32 152.0
61 TraesCS3A01G032000 chr4B 79.231 260 36 15 1 249 671704289 671704541 1.810000e-36 165.0
62 TraesCS3A01G032000 chr4B 78.919 185 24 11 77 253 491460780 491460957 2.390000e-20 111.0
63 TraesCS3A01G032000 chr5B 87.313 134 16 1 2375 2507 205249939 205250072 1.410000e-32 152.0
64 TraesCS3A01G032000 chr5B 85.821 134 18 1 2375 2507 205246591 205246724 3.050000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G032000 chr3A 17595076 17603181 8105 False 14970.0 14970 100.0000 1 8106 1 chr3A.!!$F1 8105
1 TraesCS3A01G032000 chr3A 395549803 395551019 1216 True 2156.0 2156 98.6050 5457 6675 1 chr3A.!!$R2 1218
2 TraesCS3A01G032000 chr3D 10664050 10670604 6554 True 1715.6 5483 91.5788 2 7529 5 chr3D.!!$R3 7527
3 TraesCS3A01G032000 chr3B 26523249 26528997 5748 False 1466.8 3158 89.2026 1 7381 5 chr3B.!!$F1 7380
4 TraesCS3A01G032000 chr5A 35825975 35827217 1242 True 2017.0 2017 96.2990 5457 6674 1 chr5A.!!$R1 1217
5 TraesCS3A01G032000 chr2A 562883108 562884313 1205 False 1653.0 1653 91.3470 5453 6673 1 chr2A.!!$F1 1220
6 TraesCS3A01G032000 chr2A 564613434 564614035 601 False 325.0 481 87.3820 7528 8106 2 chr2A.!!$F3 578
7 TraesCS3A01G032000 chr7D 447662569 447663878 1309 False 725.5 1184 90.8035 5457 6674 2 chr7D.!!$F2 1217
8 TraesCS3A01G032000 chr2D 450877216 450877871 655 True 741.0 741 87.2920 5731 6380 1 chr2D.!!$R1 649
9 TraesCS3A01G032000 chr6A 85575501 85576067 566 True 342.0 342 77.7780 7531 8101 1 chr6A.!!$R1 570
10 TraesCS3A01G032000 chr6A 11128014 11128616 602 False 283.5 409 85.3320 7531 8106 2 chr6A.!!$F3 575
11 TraesCS3A01G032000 chr7B 687549218 687549781 563 False 392.0 392 79.7540 7557 8106 1 chr7B.!!$F1 549
12 TraesCS3A01G032000 chr7A 663495482 663496048 566 False 246.0 246 75.3770 7520 8101 1 chr7A.!!$F3 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 497 0.322008 CCTTGAGGGTCAGACTTGGC 60.322 60.00 0.00 0.0 0.00 4.52 F
1604 1798 0.548682 AGGGCCTCTCCTCACAATGT 60.549 55.00 0.00 0.0 29.56 2.71 F
2211 2411 0.321034 TCGTGCTCAGAGCTGCAAAT 60.321 50.00 23.15 0.0 42.97 2.32 F
2922 3124 3.755905 TGTTCTGTCACACACACAACAAT 59.244 39.13 0.00 0.0 39.97 2.71 F
4499 4940 0.239347 CACAGCTGGCCTTTTCTTCG 59.761 55.00 19.93 0.0 0.00 3.79 F
4720 5161 0.106918 CACCGGGCTGCCCTTTATAA 60.107 55.00 33.39 0.0 42.67 0.98 F
5410 5864 0.036294 GTAGGGCACAGTTCAGTCCC 60.036 60.00 0.00 0.0 37.24 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2192 2392 0.321034 ATTTGCAGCTCTGAGCACGA 60.321 50.000 29.49 18.29 45.56 4.35 R
3052 3255 0.375106 GTAGCCAGATTTCGCACAGC 59.625 55.000 0.00 0.00 0.00 4.40 R
3055 3258 1.429148 CCCGTAGCCAGATTTCGCAC 61.429 60.000 0.00 0.00 0.00 5.34 R
4599 5040 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86 R
5360 5814 1.530013 CCAGTGCTCCAAAGGCAAGG 61.530 60.000 0.00 0.00 41.54 3.61 R
6354 6897 4.845580 CAGGCCGCCGATGCTTCT 62.846 66.667 3.05 0.00 34.43 2.85 R
7261 7855 0.322975 ATGCTATCATGAGGCCCGAC 59.677 55.000 17.19 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
249 419 5.652014 TGCAATTCACCAGGGTATAGAAAAG 59.348 40.000 0.00 0.00 0.00 2.27
327 497 0.322008 CCTTGAGGGTCAGACTTGGC 60.322 60.000 0.00 0.00 0.00 4.52
504 674 3.142407 AGGAATATACTCCCTCCGTTCCT 59.858 47.826 0.00 0.00 39.18 3.36
522 692 7.123697 TCCGTTCCTGAATATAAGTCTTTCTGA 59.876 37.037 0.00 0.00 0.00 3.27
580 750 3.190953 ACGTAGTTGAGAGTGTAGCTTCC 59.809 47.826 0.00 0.00 37.78 3.46
647 817 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
648 818 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
883 1053 2.119655 GCTTGCTGATGGAGGCAGG 61.120 63.158 0.00 0.00 39.68 4.85
887 1057 1.335882 TGCTGATGGAGGCAGGAGAG 61.336 60.000 0.00 0.00 34.22 3.20
892 1062 3.844090 GGAGGCAGGAGAGGACGC 61.844 72.222 0.00 0.00 0.00 5.19
923 1093 4.640201 CCCGGTATATAAATCTGCAATGGG 59.360 45.833 0.00 0.00 0.00 4.00
941 1111 2.391389 GCGCTAGTGGCTGGAACAC 61.391 63.158 0.00 0.00 39.13 3.32
982 1152 2.837498 CGCTCACCATCACCATTATCA 58.163 47.619 0.00 0.00 0.00 2.15
983 1153 3.405831 CGCTCACCATCACCATTATCAT 58.594 45.455 0.00 0.00 0.00 2.45
984 1154 3.434641 CGCTCACCATCACCATTATCATC 59.565 47.826 0.00 0.00 0.00 2.92
985 1155 4.649692 GCTCACCATCACCATTATCATCT 58.350 43.478 0.00 0.00 0.00 2.90
986 1156 5.567423 CGCTCACCATCACCATTATCATCTA 60.567 44.000 0.00 0.00 0.00 1.98
987 1157 5.873712 GCTCACCATCACCATTATCATCTAG 59.126 44.000 0.00 0.00 0.00 2.43
1071 1241 0.684805 GAGACGAGGATCACCACCCT 60.685 60.000 0.00 0.00 38.94 4.34
1222 1392 7.057732 TCTACCTTTCTAGCTATCCCCATAT 57.942 40.000 0.00 0.00 0.00 1.78
1227 1397 7.840210 ACCTTTCTAGCTATCCCCATATAGTAC 59.160 40.741 0.00 0.00 32.89 2.73
1245 1415 1.094785 ACTGGTCACAAAGCACACAC 58.905 50.000 0.00 0.00 0.00 3.82
1251 1421 2.358898 GTCACAAAGCACACACTGGAAT 59.641 45.455 0.00 0.00 0.00 3.01
1355 1539 8.879759 ACTCCGACACATTACACATAAAAATAG 58.120 33.333 0.00 0.00 0.00 1.73
1485 1670 1.903404 CCACTCAACCTGGCAACCC 60.903 63.158 0.00 0.00 0.00 4.11
1513 1698 4.336889 AACTTCATGTGACGGAAGAGAA 57.663 40.909 19.33 0.00 42.39 2.87
1548 1734 9.886132 TTTTTATTTCCTATGGTCTAGTCAGTC 57.114 33.333 0.00 0.00 0.00 3.51
1549 1735 8.840200 TTTATTTCCTATGGTCTAGTCAGTCT 57.160 34.615 0.00 0.00 0.00 3.24
1550 1736 8.840200 TTATTTCCTATGGTCTAGTCAGTCTT 57.160 34.615 0.00 0.00 0.00 3.01
1551 1737 7.741554 ATTTCCTATGGTCTAGTCAGTCTTT 57.258 36.000 0.00 0.00 0.00 2.52
1552 1738 6.531503 TTCCTATGGTCTAGTCAGTCTTTG 57.468 41.667 0.00 0.00 0.00 2.77
1555 1741 6.897966 TCCTATGGTCTAGTCAGTCTTTGATT 59.102 38.462 0.00 0.00 38.29 2.57
1556 1742 7.400339 TCCTATGGTCTAGTCAGTCTTTGATTT 59.600 37.037 0.00 0.00 38.29 2.17
1557 1743 8.043710 CCTATGGTCTAGTCAGTCTTTGATTTT 58.956 37.037 0.00 0.00 38.29 1.82
1558 1744 7.678947 ATGGTCTAGTCAGTCTTTGATTTTG 57.321 36.000 0.00 0.00 38.29 2.44
1560 1746 7.054124 TGGTCTAGTCAGTCTTTGATTTTGTT 58.946 34.615 0.00 0.00 38.29 2.83
1561 1747 7.012327 TGGTCTAGTCAGTCTTTGATTTTGTTG 59.988 37.037 0.00 0.00 38.29 3.33
1563 1749 8.398665 GTCTAGTCAGTCTTTGATTTTGTTGTT 58.601 33.333 0.00 0.00 38.29 2.83
1564 1750 9.607988 TCTAGTCAGTCTTTGATTTTGTTGTTA 57.392 29.630 0.00 0.00 38.29 2.41
1574 1768 8.886816 TTTGATTTTGTTGTTATTGTTGTTGC 57.113 26.923 0.00 0.00 0.00 4.17
1601 1795 1.276622 GTAAGGGCCTCTCCTCACAA 58.723 55.000 6.46 0.00 35.80 3.33
1604 1798 0.548682 AGGGCCTCTCCTCACAATGT 60.549 55.000 0.00 0.00 29.56 2.71
1692 1890 6.869695 TCTGCGTAAATTATGTGTCCTAAGA 58.130 36.000 0.00 0.00 0.00 2.10
1693 1891 6.978659 TCTGCGTAAATTATGTGTCCTAAGAG 59.021 38.462 0.00 0.00 0.00 2.85
1805 2003 9.599866 CTCTTTCATTTTTAAAAAGGGTGAAGT 57.400 29.630 21.39 0.24 30.62 3.01
1812 2010 8.904099 TTTTTAAAAAGGGTGAAGTTTTGTCA 57.096 26.923 9.31 0.00 0.00 3.58
1866 2064 1.985473 TGTTGCAACTCAGAAGCCAT 58.015 45.000 28.61 0.00 0.00 4.40
1874 2072 2.551270 ACTCAGAAGCCATGGGTAGAA 58.449 47.619 18.63 2.50 26.66 2.10
1884 2083 3.430453 CCATGGGTAGAAGCCTCAAAAA 58.570 45.455 2.85 0.00 36.53 1.94
1892 2091 9.315363 TGGGTAGAAGCCTCAAAAATAATTTTA 57.685 29.630 0.00 0.00 35.41 1.52
1902 2101 7.973944 CCTCAAAAATAATTTTAACCTCTCCCG 59.026 37.037 0.00 0.00 36.62 5.14
1905 2104 2.139323 AATTTTAACCTCTCCCGCCC 57.861 50.000 0.00 0.00 0.00 6.13
1959 2158 8.687292 ATACATTACAGCTCATGATCATTGTT 57.313 30.769 14.30 3.16 0.00 2.83
1962 2161 4.959596 ACAGCTCATGATCATTGTTGAC 57.040 40.909 21.07 8.15 33.85 3.18
1966 2165 5.464389 CAGCTCATGATCATTGTTGACGATA 59.536 40.000 5.16 0.00 33.85 2.92
1998 2197 4.191544 TCATTCCAAAGATAAGCCACTCG 58.808 43.478 0.00 0.00 0.00 4.18
2001 2200 0.652592 CAAAGATAAGCCACTCGCCG 59.347 55.000 0.00 0.00 38.78 6.46
2072 2271 1.140852 CGTGGGAATCTCATTGGCCTA 59.859 52.381 3.32 0.00 0.00 3.93
2101 2300 6.419980 ACAAAGTAGTACTACTAGTGCTCG 57.580 41.667 30.89 17.63 44.96 5.03
2138 2337 5.845103 TCAAACACTAATACCAACTCACGA 58.155 37.500 0.00 0.00 0.00 4.35
2147 2346 3.764237 ACCAACTCACGACTAAACCAT 57.236 42.857 0.00 0.00 0.00 3.55
2178 2378 4.021104 CAGAGGGTGTCAAATAGAGTGTCA 60.021 45.833 0.00 0.00 0.00 3.58
2211 2411 0.321034 TCGTGCTCAGAGCTGCAAAT 60.321 50.000 23.15 0.00 42.97 2.32
2247 2447 4.889995 GGCCTCTTGCTTCAAGGTAAATAT 59.110 41.667 0.00 0.00 41.33 1.28
2253 2453 9.330063 CTCTTGCTTCAAGGTAAATATACATGA 57.670 33.333 0.00 0.00 41.33 3.07
2314 2514 7.336931 ACTGTGGTATTTTTGACATCCTATCAC 59.663 37.037 0.00 0.00 0.00 3.06
2315 2515 7.402054 TGTGGTATTTTTGACATCCTATCACT 58.598 34.615 0.00 0.00 0.00 3.41
2371 2571 7.997107 TGATTGTTCGTCCACATACTATAAC 57.003 36.000 0.00 0.00 0.00 1.89
2384 2584 6.871492 CACATACTATAACAGTGTCACAACCA 59.129 38.462 5.62 0.00 38.24 3.67
2546 2746 8.585018 ACCCAAAATACTCTTCCTTAATGTTTG 58.415 33.333 0.00 0.00 0.00 2.93
2839 3041 4.385825 GGGTTGATATTGGCAAGATACGA 58.614 43.478 7.43 0.00 0.00 3.43
2870 3072 5.338056 GGTGTCTTACAGGTACCAATCATCA 60.338 44.000 15.94 2.25 0.00 3.07
2881 3083 5.163195 GGTACCAATCATCACCAACCTATCT 60.163 44.000 7.15 0.00 0.00 1.98
2888 3090 6.340962 TCATCACCAACCTATCTATTACGG 57.659 41.667 0.00 0.00 0.00 4.02
2922 3124 3.755905 TGTTCTGTCACACACACAACAAT 59.244 39.130 0.00 0.00 39.97 2.71
2923 3125 4.217334 TGTTCTGTCACACACACAACAATT 59.783 37.500 0.00 0.00 39.97 2.32
3075 3278 1.887707 GCGAAATCTGGCTACGGGG 60.888 63.158 0.00 0.00 0.00 5.73
3106 3309 0.250081 GTGGCATAGGCTCTGGCTAC 60.250 60.000 23.52 16.67 43.23 3.58
3107 3310 0.690744 TGGCATAGGCTCTGGCTACA 60.691 55.000 23.52 4.68 43.23 2.74
3164 3367 5.584649 GCATAGCACACTGACCTATACAAAA 59.415 40.000 0.00 0.00 0.00 2.44
3272 3476 0.252197 GGTTTAGTCCTCACGGCCAT 59.748 55.000 2.24 0.00 0.00 4.40
3279 3483 1.411246 GTCCTCACGGCCATATACACA 59.589 52.381 2.24 0.00 0.00 3.72
3318 3522 2.047560 GTGCCGGACTGGGTGTAC 60.048 66.667 5.05 0.00 38.63 2.90
3357 3561 5.048083 GGACTCAACCATGAAGCATTTTGTA 60.048 40.000 0.00 0.00 34.49 2.41
3374 3578 8.504005 GCATTTTGTAGTAAGCTTTCACTTCTA 58.496 33.333 3.20 0.00 0.00 2.10
3386 3590 9.967346 AAGCTTTCACTTCTAAAAAGTATTTCC 57.033 29.630 0.00 0.00 37.28 3.13
3388 3592 8.577296 GCTTTCACTTCTAAAAAGTATTTCCCT 58.423 33.333 0.00 0.00 37.28 4.20
3428 3635 7.821846 TGCATTTTTCTTAAGAACCTTTGTTGT 59.178 29.630 17.51 0.00 33.97 3.32
3521 3728 3.838120 TGGCATGATCGATCGAAGTATC 58.162 45.455 23.50 15.34 0.00 2.24
3533 3740 5.753438 CGATCGAAGTATCTTTGGAATCCAA 59.247 40.000 11.23 11.23 42.29 3.53
3665 3872 7.232737 TCAATATTCCTAGTATGGTCGTGACAT 59.767 37.037 2.00 0.00 0.00 3.06
3666 3873 8.520351 CAATATTCCTAGTATGGTCGTGACATA 58.480 37.037 2.00 0.00 0.00 2.29
3676 3883 6.901081 ATGGTCGTGACATATTCTCTCATA 57.099 37.500 2.00 0.00 0.00 2.15
3739 3946 0.324943 CAATGGACCACTCCCGTCTT 59.675 55.000 0.00 0.00 35.34 3.01
3794 4001 0.617820 GAGGGCCTCCTAAGGTGTGA 60.618 60.000 23.49 0.00 45.05 3.58
3803 4010 5.570844 GCCTCCTAAGGTGTGAAAATAGTGA 60.571 44.000 0.00 0.00 45.34 3.41
3862 4069 9.518906 GATGCATCTGAATCTCACTATATACTG 57.481 37.037 19.70 0.00 0.00 2.74
3927 4134 1.073199 CTTGGTCGGGCTCCAGTTT 59.927 57.895 0.00 0.00 36.28 2.66
4008 4445 6.980397 CAGTTTTCCTTTTATATGATGGCCAC 59.020 38.462 8.16 2.36 0.00 5.01
4043 4482 0.809385 CCGACTAAGCAACTCCGAGA 59.191 55.000 1.33 0.00 0.00 4.04
4077 4516 3.699067 CAAAAGTTGTTGCCTGTCTCAG 58.301 45.455 0.00 0.00 0.00 3.35
4087 4526 2.842496 TGCCTGTCTCAGATGAGGAAAT 59.158 45.455 9.87 0.00 42.30 2.17
4105 4544 6.585416 AGGAAATCATTATTTTCATGGGTGC 58.415 36.000 0.00 0.00 35.41 5.01
4108 4547 8.203485 GGAAATCATTATTTTCATGGGTGCTTA 58.797 33.333 0.00 0.00 35.41 3.09
4116 4555 4.846779 TTCATGGGTGCTTAAGTTTGTC 57.153 40.909 4.02 0.00 0.00 3.18
4117 4556 3.153919 TCATGGGTGCTTAAGTTTGTCC 58.846 45.455 4.02 0.65 0.00 4.02
4119 4558 0.240145 GGGTGCTTAAGTTTGTCCGC 59.760 55.000 4.02 0.00 0.00 5.54
4138 4577 4.083003 TCCGCCATTTAAACTTGTTGCTAG 60.083 41.667 0.00 0.00 0.00 3.42
4142 4581 5.863935 GCCATTTAAACTTGTTGCTAGGAAG 59.136 40.000 0.00 0.00 0.00 3.46
4148 4587 2.224548 ACTTGTTGCTAGGAAGTGTCCC 60.225 50.000 0.00 0.00 46.30 4.46
4149 4588 1.729586 TGTTGCTAGGAAGTGTCCCT 58.270 50.000 0.00 0.00 46.30 4.20
4158 4597 4.513406 AGGAAGTGTCCCTAGAGACTAG 57.487 50.000 5.94 0.00 45.42 2.57
4159 4598 3.853784 AGGAAGTGTCCCTAGAGACTAGT 59.146 47.826 5.94 0.00 45.42 2.57
4215 4654 8.548025 TCAACAAAATCCTAGTTCCTGATGATA 58.452 33.333 0.00 0.00 0.00 2.15
4231 4670 8.927411 TCCTGATGATAAACTCTACATCATTCA 58.073 33.333 0.00 0.00 44.76 2.57
4238 4677 4.082665 ACTCTACATCATTCATGCAGGG 57.917 45.455 0.00 0.00 32.89 4.45
4280 4719 2.722201 GGTCCCTCTCGGCGTTGAT 61.722 63.158 6.85 0.00 0.00 2.57
4281 4720 1.389609 GGTCCCTCTCGGCGTTGATA 61.390 60.000 6.85 0.00 0.00 2.15
4332 4771 8.587952 ACTTGTTTGGTAATTATTTTGCTGAC 57.412 30.769 0.00 0.00 0.00 3.51
4391 4831 4.566545 TGTGACTTTGTAAACAGCATGG 57.433 40.909 0.00 0.00 43.62 3.66
4422 4863 4.097286 GGCGTTTTGGGTTGACATATATGT 59.903 41.667 18.31 18.31 45.16 2.29
4474 4915 5.286320 CAGTCTTAGCTACACATGTGTAACG 59.714 44.000 32.40 24.42 44.47 3.18
4475 4916 5.048224 AGTCTTAGCTACACATGTGTAACGT 60.048 40.000 32.40 23.10 44.47 3.99
4499 4940 0.239347 CACAGCTGGCCTTTTCTTCG 59.761 55.000 19.93 0.00 0.00 3.79
4519 4960 1.968493 GCGGGGATCTATCTGTTGGTA 59.032 52.381 0.00 0.00 0.00 3.25
4597 5038 8.477419 AAAAATCTAAGAGTTCATGGGTTCAA 57.523 30.769 0.00 0.00 0.00 2.69
4598 5039 7.693969 AAATCTAAGAGTTCATGGGTTCAAG 57.306 36.000 0.00 0.00 0.00 3.02
4599 5040 5.825593 TCTAAGAGTTCATGGGTTCAAGT 57.174 39.130 0.00 0.00 0.00 3.16
4600 5041 5.794894 TCTAAGAGTTCATGGGTTCAAGTC 58.205 41.667 0.00 0.00 0.00 3.01
4601 5042 3.425162 AGAGTTCATGGGTTCAAGTCC 57.575 47.619 0.00 0.00 0.00 3.85
4602 5043 2.982488 AGAGTTCATGGGTTCAAGTCCT 59.018 45.455 0.00 0.00 0.00 3.85
4603 5044 3.077359 GAGTTCATGGGTTCAAGTCCTG 58.923 50.000 0.00 0.00 0.00 3.86
4604 5045 2.162681 GTTCATGGGTTCAAGTCCTGG 58.837 52.381 0.00 0.00 0.00 4.45
4605 5046 1.741028 TCATGGGTTCAAGTCCTGGA 58.259 50.000 0.00 0.00 0.00 3.86
4606 5047 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
4607 5048 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
4608 5049 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
4609 5050 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
4620 5061 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
4621 5062 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
4622 5063 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
4623 5064 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
4624 5065 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
4625 5066 3.572584 GAAACAGCCTCTTGCAGAAATG 58.427 45.455 0.00 0.00 44.83 2.32
4626 5067 2.283145 ACAGCCTCTTGCAGAAATGT 57.717 45.000 0.00 0.00 44.83 2.71
4627 5068 3.423539 ACAGCCTCTTGCAGAAATGTA 57.576 42.857 0.00 0.00 44.83 2.29
4628 5069 3.754965 ACAGCCTCTTGCAGAAATGTAA 58.245 40.909 0.00 0.00 44.83 2.41
4629 5070 3.755378 ACAGCCTCTTGCAGAAATGTAAG 59.245 43.478 0.30 0.30 44.83 2.34
4630 5071 3.128242 CAGCCTCTTGCAGAAATGTAAGG 59.872 47.826 6.30 0.00 44.83 2.69
4631 5072 3.009473 AGCCTCTTGCAGAAATGTAAGGA 59.991 43.478 6.30 0.00 44.83 3.36
4632 5073 3.758554 GCCTCTTGCAGAAATGTAAGGAA 59.241 43.478 6.30 0.00 40.77 3.36
4633 5074 4.218417 GCCTCTTGCAGAAATGTAAGGAAA 59.782 41.667 6.30 0.00 40.77 3.13
4634 5075 5.620879 GCCTCTTGCAGAAATGTAAGGAAAG 60.621 44.000 6.30 0.00 40.77 2.62
4635 5076 5.105997 CCTCTTGCAGAAATGTAAGGAAAGG 60.106 44.000 6.30 3.08 33.32 3.11
4636 5077 5.385198 TCTTGCAGAAATGTAAGGAAAGGT 58.615 37.500 6.30 0.00 33.32 3.50
4637 5078 5.833131 TCTTGCAGAAATGTAAGGAAAGGTT 59.167 36.000 6.30 0.00 33.32 3.50
4638 5079 5.452078 TGCAGAAATGTAAGGAAAGGTTG 57.548 39.130 0.00 0.00 0.00 3.77
4639 5080 4.237724 GCAGAAATGTAAGGAAAGGTTGC 58.762 43.478 0.00 0.00 0.00 4.17
4640 5081 4.475944 CAGAAATGTAAGGAAAGGTTGCG 58.524 43.478 0.00 0.00 0.00 4.85
4641 5082 4.023193 CAGAAATGTAAGGAAAGGTTGCGT 60.023 41.667 0.00 0.00 0.00 5.24
4642 5083 5.180492 CAGAAATGTAAGGAAAGGTTGCGTA 59.820 40.000 0.00 0.00 0.00 4.42
4643 5084 5.180680 AGAAATGTAAGGAAAGGTTGCGTAC 59.819 40.000 0.05 0.05 36.72 3.67
4644 5085 3.756933 TGTAAGGAAAGGTTGCGTACT 57.243 42.857 7.01 0.00 37.01 2.73
4645 5086 4.870123 TGTAAGGAAAGGTTGCGTACTA 57.130 40.909 7.01 0.00 37.01 1.82
4646 5087 5.212532 TGTAAGGAAAGGTTGCGTACTAA 57.787 39.130 7.01 0.00 37.01 2.24
4647 5088 5.609423 TGTAAGGAAAGGTTGCGTACTAAA 58.391 37.500 7.01 0.00 37.01 1.85
4648 5089 5.697633 TGTAAGGAAAGGTTGCGTACTAAAG 59.302 40.000 7.01 0.00 37.01 1.85
4649 5090 4.612264 AGGAAAGGTTGCGTACTAAAGA 57.388 40.909 0.00 0.00 0.00 2.52
4650 5091 4.313282 AGGAAAGGTTGCGTACTAAAGAC 58.687 43.478 0.00 0.00 0.00 3.01
4651 5092 3.434641 GGAAAGGTTGCGTACTAAAGACC 59.565 47.826 0.00 0.00 0.00 3.85
4652 5093 2.756840 AGGTTGCGTACTAAAGACCC 57.243 50.000 0.00 0.00 0.00 4.46
4653 5094 1.972795 AGGTTGCGTACTAAAGACCCA 59.027 47.619 0.00 0.00 0.00 4.51
4654 5095 2.369532 AGGTTGCGTACTAAAGACCCAA 59.630 45.455 0.00 0.00 0.00 4.12
4655 5096 3.140623 GGTTGCGTACTAAAGACCCAAA 58.859 45.455 0.00 0.00 0.00 3.28
4656 5097 3.187842 GGTTGCGTACTAAAGACCCAAAG 59.812 47.826 0.00 0.00 0.00 2.77
4657 5098 3.756933 TGCGTACTAAAGACCCAAAGT 57.243 42.857 0.00 0.00 0.00 2.66
4658 5099 3.395639 TGCGTACTAAAGACCCAAAGTG 58.604 45.455 0.00 0.00 0.00 3.16
4659 5100 2.740447 GCGTACTAAAGACCCAAAGTGG 59.260 50.000 0.00 0.00 37.25 4.00
4660 5101 3.804759 GCGTACTAAAGACCCAAAGTGGT 60.805 47.826 0.00 0.00 42.79 4.16
4665 5106 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
4666 5107 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
4667 5108 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
4668 5109 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
4669 5110 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
4670 5111 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
4671 5112 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
4672 5113 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
4673 5114 2.926242 GTGGTCGGACCCTTCCCA 60.926 66.667 23.81 1.47 38.99 4.37
4674 5115 2.606519 TGGTCGGACCCTTCCCAG 60.607 66.667 23.81 0.00 38.99 4.45
4675 5116 2.284405 GGTCGGACCCTTCCCAGA 60.284 66.667 16.55 0.00 38.99 3.86
4676 5117 1.916777 GGTCGGACCCTTCCCAGAA 60.917 63.158 16.55 0.00 38.99 3.02
4677 5118 1.295746 GTCGGACCCTTCCCAGAAC 59.704 63.158 0.00 0.00 38.99 3.01
4678 5119 1.916777 TCGGACCCTTCCCAGAACC 60.917 63.158 0.00 0.00 38.99 3.62
4679 5120 2.967946 CGGACCCTTCCCAGAACCC 61.968 68.421 0.00 0.00 38.99 4.11
4680 5121 1.541620 GGACCCTTCCCAGAACCCT 60.542 63.158 0.00 0.00 35.57 4.34
4681 5122 1.685820 GACCCTTCCCAGAACCCTG 59.314 63.158 0.00 0.00 40.09 4.45
4682 5123 2.356667 CCCTTCCCAGAACCCTGC 59.643 66.667 0.00 0.00 39.07 4.85
4683 5124 2.045926 CCTTCCCAGAACCCTGCG 60.046 66.667 0.00 0.00 39.07 5.18
4684 5125 2.747855 CTTCCCAGAACCCTGCGC 60.748 66.667 0.00 0.00 39.07 6.09
4685 5126 3.551496 CTTCCCAGAACCCTGCGCA 62.551 63.158 10.98 10.98 39.07 6.09
4686 5127 3.126703 TTCCCAGAACCCTGCGCAA 62.127 57.895 13.05 0.00 39.07 4.85
4687 5128 3.058160 CCCAGAACCCTGCGCAAG 61.058 66.667 13.05 4.91 39.07 4.01
4707 5148 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
4708 5149 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
4709 5150 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
4710 5151 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
4711 5152 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
4712 5153 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
4717 5158 4.733542 GCACCGGGCTGCCCTTTA 62.734 66.667 33.39 0.00 42.67 1.85
4720 5161 0.106918 CACCGGGCTGCCCTTTATAA 60.107 55.000 33.39 0.00 42.67 0.98
4747 5188 9.753674 AAAAATCTAAGAGTAATCCCACATTCA 57.246 29.630 0.00 0.00 0.00 2.57
4749 5190 8.738645 AATCTAAGAGTAATCCCACATTCAAC 57.261 34.615 0.00 0.00 0.00 3.18
4779 5220 8.777865 TGAGTTTATATTTCACCTCTCAACTG 57.222 34.615 0.00 0.00 0.00 3.16
4780 5221 8.593679 TGAGTTTATATTTCACCTCTCAACTGA 58.406 33.333 0.00 0.00 0.00 3.41
4795 5236 7.359598 CCTCTCAACTGAAAAACTAGACGAATG 60.360 40.741 0.00 0.00 0.00 2.67
4800 5241 9.450807 CAACTGAAAAACTAGACGAATGAAAAT 57.549 29.630 0.00 0.00 0.00 1.82
4842 5283 6.890293 AGGATTGATACTCTAAGGTTGTTCC 58.110 40.000 0.00 0.00 0.00 3.62
4888 5330 6.345298 ACCACCCAATAAAGTGAACAAAAAG 58.655 36.000 0.00 0.00 36.01 2.27
4915 5357 6.985188 TCAAGAAAGCATACGAAAAGCTAT 57.015 33.333 0.00 0.00 37.70 2.97
4921 5363 5.975410 AGCATACGAAAAGCTATGAGTTC 57.025 39.130 0.00 0.00 36.73 3.01
4995 5438 7.177392 ACAAAATGTAGAAATTCAGGAGAAGGG 59.823 37.037 0.00 0.00 37.14 3.95
4996 5439 6.642733 AATGTAGAAATTCAGGAGAAGGGA 57.357 37.500 0.00 0.00 37.14 4.20
5179 5630 6.295575 GGAAACCACATTATCCAAAACATCCA 60.296 38.462 0.00 0.00 32.08 3.41
5182 5633 5.541868 ACCACATTATCCAAAACATCCACAA 59.458 36.000 0.00 0.00 0.00 3.33
5197 5648 6.118170 ACATCCACAAAATAGTCTCATGAGG 58.882 40.000 22.42 6.36 0.00 3.86
5243 5694 2.034939 CGGTTTAGGTTTTGGTGGTTCC 59.965 50.000 0.00 0.00 0.00 3.62
5346 5800 3.013921 TGAGAAACAAAAGCGTTGGAGT 58.986 40.909 7.89 0.00 0.00 3.85
5360 5814 3.670055 CGTTGGAGTCATGCATGTTTTTC 59.330 43.478 25.43 17.11 0.00 2.29
5361 5815 3.940209 TGGAGTCATGCATGTTTTTCC 57.060 42.857 25.43 23.73 0.00 3.13
5379 5833 1.530013 CCTTGCCTTTGGAGCACTGG 61.530 60.000 0.00 0.00 40.69 4.00
5410 5864 0.036294 GTAGGGCACAGTTCAGTCCC 60.036 60.000 0.00 0.00 37.24 4.46
5425 5879 0.179124 GTCCCGAGAGCATCACAGAC 60.179 60.000 0.00 0.00 37.82 3.51
5449 5903 2.195389 TGCTTGGATTGAGCATGCC 58.805 52.632 15.66 6.65 44.63 4.40
5450 5904 1.324740 TGCTTGGATTGAGCATGCCC 61.325 55.000 15.66 8.64 44.63 5.36
5451 5905 1.041447 GCTTGGATTGAGCATGCCCT 61.041 55.000 15.66 0.00 39.89 5.19
5452 5906 1.481871 CTTGGATTGAGCATGCCCTT 58.518 50.000 15.66 0.00 0.00 3.95
5453 5907 1.136305 CTTGGATTGAGCATGCCCTTG 59.864 52.381 15.66 1.61 0.00 3.61
5454 5908 1.324740 TGGATTGAGCATGCCCTTGC 61.325 55.000 15.66 3.03 43.09 4.01
5719 6216 7.865706 ACGCTCTTAAGGTTCATTATCATTT 57.134 32.000 1.85 0.00 0.00 2.32
6334 6875 2.618045 GGAAAGGGAAAAGGAGCATCGA 60.618 50.000 0.00 0.00 34.37 3.59
6354 6897 2.300066 CGCGCAGTCACGAACAGAA 61.300 57.895 8.75 0.00 34.06 3.02
6843 7437 0.685131 TGATGGGAAAGCATGCCCTG 60.685 55.000 15.66 0.00 44.96 4.45
6970 7564 9.594936 TTCAATACCTTCTTTTCCAGGAATTTA 57.405 29.630 1.58 0.00 33.90 1.40
6974 7568 7.946381 ACCTTCTTTTCCAGGAATTTATCTC 57.054 36.000 1.58 0.00 33.90 2.75
7004 7598 8.319143 ACTAATTAACTAGCGATGTTTTGTGT 57.681 30.769 0.00 0.00 0.00 3.72
7005 7599 8.227791 ACTAATTAACTAGCGATGTTTTGTGTG 58.772 33.333 0.00 0.00 0.00 3.82
7007 7601 3.878086 ACTAGCGATGTTTTGTGTGTG 57.122 42.857 0.00 0.00 0.00 3.82
7008 7602 3.202906 ACTAGCGATGTTTTGTGTGTGT 58.797 40.909 0.00 0.00 0.00 3.72
7009 7603 2.473530 AGCGATGTTTTGTGTGTGTG 57.526 45.000 0.00 0.00 0.00 3.82
7010 7604 1.742831 AGCGATGTTTTGTGTGTGTGT 59.257 42.857 0.00 0.00 0.00 3.72
7011 7605 1.845568 GCGATGTTTTGTGTGTGTGTG 59.154 47.619 0.00 0.00 0.00 3.82
7012 7606 2.730715 GCGATGTTTTGTGTGTGTGTGT 60.731 45.455 0.00 0.00 0.00 3.72
7013 7607 2.845385 CGATGTTTTGTGTGTGTGTGTG 59.155 45.455 0.00 0.00 0.00 3.82
7014 7608 3.669290 CGATGTTTTGTGTGTGTGTGTGT 60.669 43.478 0.00 0.00 0.00 3.72
7015 7609 3.005341 TGTTTTGTGTGTGTGTGTGTG 57.995 42.857 0.00 0.00 0.00 3.82
7016 7610 1.718711 GTTTTGTGTGTGTGTGTGTGC 59.281 47.619 0.00 0.00 0.00 4.57
7017 7611 0.110010 TTTGTGTGTGTGTGTGTGCG 60.110 50.000 0.00 0.00 0.00 5.34
7018 7612 2.277247 GTGTGTGTGTGTGTGCGC 60.277 61.111 0.00 0.00 0.00 6.09
7019 7613 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
7046 7640 4.259810 GCGCGCGTATATATGATTGATGTT 60.260 41.667 32.35 0.00 0.00 2.71
7051 7645 7.096599 GCGCGTATATATGATTGATGTTATCGT 60.097 37.037 8.43 0.00 0.00 3.73
7095 7689 6.563422 TCAAACAGTTGAAACTCATTGGAAG 58.437 36.000 13.45 0.00 40.87 3.46
7148 7742 3.262420 TCAACTAATGCTCGAAGGAAGC 58.738 45.455 0.00 0.00 0.00 3.86
7149 7743 3.002791 CAACTAATGCTCGAAGGAAGCA 58.997 45.455 0.00 0.00 43.04 3.91
7152 7746 5.220710 ACTAATGCTCGAAGGAAGCATAT 57.779 39.130 10.70 4.99 46.99 1.78
7165 7759 8.867935 CGAAGGAAGCATATTATCAACTATCAG 58.132 37.037 0.00 0.00 0.00 2.90
7166 7760 9.717942 GAAGGAAGCATATTATCAACTATCAGT 57.282 33.333 0.00 0.00 0.00 3.41
7169 7763 6.957984 AGCATATTATCAACTATCAGTGCG 57.042 37.500 0.00 0.00 34.33 5.34
7196 7790 6.939132 AGCCATCATCTATTTCACTTGAAG 57.061 37.500 0.00 0.00 35.21 3.02
7199 7793 6.317140 GCCATCATCTATTTCACTTGAAGTCA 59.683 38.462 0.00 0.00 35.21 3.41
7205 7799 7.509141 TCTATTTCACTTGAAGTCAAATGCA 57.491 32.000 15.97 1.23 33.56 3.96
7211 7805 5.686841 TCACTTGAAGTCAAATGCAATTTCG 59.313 36.000 0.00 0.00 44.81 3.46
7213 7807 5.459762 ACTTGAAGTCAAATGCAATTTCGTG 59.540 36.000 0.00 0.00 44.81 4.35
7218 7812 4.037923 AGTCAAATGCAATTTCGTGAACCT 59.962 37.500 0.00 0.00 44.81 3.50
7228 7822 4.625972 TTTCGTGAACCTCAAAGGAAAC 57.374 40.909 0.00 0.00 37.67 2.78
7257 7851 5.596836 TTTGGTTGTGAAATTGAGCTCTT 57.403 34.783 16.19 0.00 0.00 2.85
7261 7855 5.122239 TGGTTGTGAAATTGAGCTCTTATCG 59.878 40.000 16.19 0.00 0.00 2.92
7264 7858 4.562789 TGTGAAATTGAGCTCTTATCGTCG 59.437 41.667 16.19 0.00 0.00 5.12
7268 7862 1.007154 GAGCTCTTATCGTCGGGCC 60.007 63.158 6.43 0.00 0.00 5.80
7281 7875 1.059098 TCGGGCCTCATGATAGCATT 58.941 50.000 17.00 0.00 30.68 3.56
7282 7876 1.002430 TCGGGCCTCATGATAGCATTC 59.998 52.381 17.00 7.32 30.68 2.67
7320 7914 3.664107 TCCAAACAGTGCTAGCTAAGTG 58.336 45.455 17.23 12.01 0.00 3.16
7410 8012 7.175347 TCTAGATGATGCAACTACAAAGAGT 57.825 36.000 0.00 0.00 0.00 3.24
7414 8016 6.883217 AGATGATGCAACTACAAAGAGTTCAT 59.117 34.615 0.00 0.00 37.57 2.57
7415 8017 6.486253 TGATGCAACTACAAAGAGTTCATC 57.514 37.500 14.79 14.79 40.20 2.92
7428 8030 5.053978 AGAGTTCATCTTCCAACCTTTGT 57.946 39.130 0.00 0.00 32.99 2.83
7431 8033 7.918076 AGAGTTCATCTTCCAACCTTTGTATA 58.082 34.615 0.00 0.00 32.99 1.47
7434 8036 8.822805 AGTTCATCTTCCAACCTTTGTATAGTA 58.177 33.333 0.00 0.00 0.00 1.82
7443 8045 9.038072 TCCAACCTTTGTATAGTAGATGTACAA 57.962 33.333 0.00 0.00 41.92 2.41
7472 8074 6.018588 CGACAACATACAAACAGAAACACCTA 60.019 38.462 0.00 0.00 0.00 3.08
7478 8080 9.959721 ACATACAAACAGAAACACCTAGATATT 57.040 29.630 0.00 0.00 0.00 1.28
7507 8109 5.422331 TCATAAAGACAATCGAAGAGGAGGT 59.578 40.000 0.00 0.00 43.63 3.85
7510 8112 2.494073 AGACAATCGAAGAGGAGGTGAC 59.506 50.000 0.00 0.00 43.63 3.67
7513 8115 4.023980 ACAATCGAAGAGGAGGTGACATA 58.976 43.478 0.00 0.00 43.63 2.29
7529 8131 6.886459 AGGTGACATATCATTGTTAGCACTTT 59.114 34.615 0.00 0.00 36.42 2.66
7581 8184 9.031537 TCTATTCATCAACTGTCAAGGTAGTAA 57.968 33.333 0.00 0.00 0.00 2.24
7651 8259 2.946329 CGATGACTACTAGCACTGGAGT 59.054 50.000 0.00 0.00 0.00 3.85
7668 8305 3.430862 TGAGCCAAACGCATCGCC 61.431 61.111 0.00 0.00 41.38 5.54
7690 8327 4.000988 CGGCAAACCTTGTTGTAGTAGAT 58.999 43.478 0.00 0.00 0.00 1.98
7734 8371 1.274703 CCCCATAGGACCAGCACACT 61.275 60.000 0.00 0.00 38.24 3.55
7736 8373 1.837439 CCCATAGGACCAGCACACTAA 59.163 52.381 0.00 0.00 33.47 2.24
7737 8374 2.238646 CCCATAGGACCAGCACACTAAA 59.761 50.000 0.00 0.00 33.47 1.85
7749 8386 2.223386 GCACACTAAAAACAGCAACCGA 60.223 45.455 0.00 0.00 0.00 4.69
7750 8387 3.550030 GCACACTAAAAACAGCAACCGAT 60.550 43.478 0.00 0.00 0.00 4.18
7802 8439 4.265904 TCCAACATGTAGACACACGAAT 57.734 40.909 0.00 0.00 37.54 3.34
7808 8445 6.208988 ACATGTAGACACACGAATACAGAT 57.791 37.500 0.00 0.00 37.54 2.90
7824 8461 7.514280 CGAATACAGATGAACGAAGACAGAATG 60.514 40.741 0.00 0.00 46.00 2.67
7860 8497 4.420168 CAAACATAAATGCCGACCGAATT 58.580 39.130 0.00 0.00 0.00 2.17
7893 8530 2.687935 GCCAGAGAAAAACCTTCACACA 59.312 45.455 0.00 0.00 0.00 3.72
7919 8557 3.195610 TCTGACGATGCTAGAAACACCAT 59.804 43.478 0.00 0.00 0.00 3.55
7921 8559 2.866762 GACGATGCTAGAAACACCATCC 59.133 50.000 0.00 0.00 32.49 3.51
7926 8564 1.066430 GCTAGAAACACCATCCGGACA 60.066 52.381 6.12 0.00 35.59 4.02
8023 8665 8.584063 AACCCTAACAAAACTCAAAAGAGTAA 57.416 30.769 0.00 0.00 34.56 2.24
8056 8698 2.853542 TCCTGCCAGCAAGGGTCA 60.854 61.111 0.00 0.00 38.09 4.02
8097 8739 1.623811 GCCCTAAGACCACAAGAGACA 59.376 52.381 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.486982 GTGCACTGTTTGATGAGCAGAT 59.513 45.455 10.32 0.00 38.75 2.90
200 370 9.874205 CACCCATGATGAACAGTAAAATAAAAT 57.126 29.630 0.00 0.00 0.00 1.82
202 372 7.039434 TGCACCCATGATGAACAGTAAAATAAA 60.039 33.333 0.00 0.00 0.00 1.40
522 692 6.538742 CCGTATGTAGTCCATGTTGAAATCTT 59.461 38.462 0.00 0.00 34.86 2.40
580 750 4.442706 ACTACATACGGAGCAAAATGAGG 58.557 43.478 0.00 0.00 0.00 3.86
851 1021 5.266733 TCAGCAAGCTCACATTTCTTTTT 57.733 34.783 0.00 0.00 0.00 1.94
862 1032 1.077930 GCCTCCATCAGCAAGCTCA 60.078 57.895 0.00 0.00 0.00 4.26
864 1034 1.077644 CTGCCTCCATCAGCAAGCT 60.078 57.895 0.00 0.00 38.82 3.74
866 1036 0.464013 CTCCTGCCTCCATCAGCAAG 60.464 60.000 0.00 0.00 38.82 4.01
892 1062 2.157834 TTATATACCGGGTGCGCAAG 57.842 50.000 14.00 6.75 43.44 4.01
925 1095 0.674895 CCAGTGTTCCAGCCACTAGC 60.675 60.000 0.00 0.00 41.10 3.42
926 1096 0.976641 TCCAGTGTTCCAGCCACTAG 59.023 55.000 0.00 0.00 41.10 2.57
927 1097 1.347707 CTTCCAGTGTTCCAGCCACTA 59.652 52.381 0.00 0.00 41.10 2.74
941 1111 3.058293 CGCTACTATCTCTGAGCTTCCAG 60.058 52.174 0.00 0.00 35.55 3.86
982 1152 4.082841 CGACATACTGCTGCTGATCTAGAT 60.083 45.833 13.69 4.47 0.00 1.98
983 1153 3.251972 CGACATACTGCTGCTGATCTAGA 59.748 47.826 13.69 0.00 0.00 2.43
984 1154 3.563508 CGACATACTGCTGCTGATCTAG 58.436 50.000 13.69 0.00 0.00 2.43
985 1155 2.294512 CCGACATACTGCTGCTGATCTA 59.705 50.000 13.69 0.00 0.00 1.98
986 1156 1.068281 CCGACATACTGCTGCTGATCT 59.932 52.381 13.69 0.00 0.00 2.75
987 1157 1.495878 CCGACATACTGCTGCTGATC 58.504 55.000 13.69 4.60 0.00 2.92
1222 1392 3.133183 TGTGTGCTTTGTGACCAGTACTA 59.867 43.478 0.00 0.00 0.00 1.82
1227 1397 1.064505 CAGTGTGTGCTTTGTGACCAG 59.935 52.381 0.00 0.00 0.00 4.00
1245 1415 5.619309 GCATGCATGAAGCTATGTATTCCAG 60.619 44.000 30.64 0.00 45.94 3.86
1326 1496 1.964933 TGTGTAATGTGTCGGAGTGGA 59.035 47.619 0.00 0.00 0.00 4.02
1355 1539 7.225341 CCTTTATGCCAAATTATCTCTTTTGCC 59.775 37.037 0.00 0.00 32.68 4.52
1367 1551 4.773013 CCAGAATGCCTTTATGCCAAATT 58.227 39.130 0.00 0.00 31.97 1.82
1485 1670 2.416547 CCGTCACATGAAGTTAGCAAGG 59.583 50.000 0.00 0.00 0.00 3.61
1532 1718 8.877779 CAAAATCAAAGACTGACTAGACCATAG 58.122 37.037 0.00 0.00 36.69 2.23
1541 1727 9.520204 CAATAACAACAAAATCAAAGACTGACT 57.480 29.630 0.00 0.00 36.69 3.41
1545 1731 9.651913 ACAACAATAACAACAAAATCAAAGACT 57.348 25.926 0.00 0.00 0.00 3.24
1548 1734 8.997960 GCAACAACAATAACAACAAAATCAAAG 58.002 29.630 0.00 0.00 0.00 2.77
1549 1735 8.725148 AGCAACAACAATAACAACAAAATCAAA 58.275 25.926 0.00 0.00 0.00 2.69
1550 1736 8.173775 CAGCAACAACAATAACAACAAAATCAA 58.826 29.630 0.00 0.00 0.00 2.57
1551 1737 7.332926 ACAGCAACAACAATAACAACAAAATCA 59.667 29.630 0.00 0.00 0.00 2.57
1552 1738 7.683746 ACAGCAACAACAATAACAACAAAATC 58.316 30.769 0.00 0.00 0.00 2.17
1555 1741 6.425114 ACAACAGCAACAACAATAACAACAAA 59.575 30.769 0.00 0.00 0.00 2.83
1556 1742 5.928839 ACAACAGCAACAACAATAACAACAA 59.071 32.000 0.00 0.00 0.00 2.83
1557 1743 5.473931 ACAACAGCAACAACAATAACAACA 58.526 33.333 0.00 0.00 0.00 3.33
1558 1744 6.128688 ACAACAACAGCAACAACAATAACAAC 60.129 34.615 0.00 0.00 0.00 3.32
1560 1746 5.473931 ACAACAACAGCAACAACAATAACA 58.526 33.333 0.00 0.00 0.00 2.41
1561 1747 7.253950 CCTTACAACAACAGCAACAACAATAAC 60.254 37.037 0.00 0.00 0.00 1.89
1563 1749 6.269315 CCTTACAACAACAGCAACAACAATA 58.731 36.000 0.00 0.00 0.00 1.90
1564 1750 5.108517 CCTTACAACAACAGCAACAACAAT 58.891 37.500 0.00 0.00 0.00 2.71
1574 1768 2.427506 GAGAGGCCCTTACAACAACAG 58.572 52.381 0.00 0.00 0.00 3.16
1672 1868 9.755064 CAAAACTCTTAGGACACATAATTTACG 57.245 33.333 0.00 0.00 0.00 3.18
1692 1890 3.199946 TCAGTGTTGAGGTCTCCAAAACT 59.800 43.478 0.00 0.00 41.41 2.66
1693 1891 3.541632 TCAGTGTTGAGGTCTCCAAAAC 58.458 45.455 0.00 0.00 33.14 2.43
1828 2026 7.168219 TGCAACATGGATTTTCTAGTTAGACT 58.832 34.615 0.00 0.00 30.81 3.24
1843 2041 1.881973 GCTTCTGAGTTGCAACATGGA 59.118 47.619 30.11 20.11 0.00 3.41
1845 2043 1.610038 TGGCTTCTGAGTTGCAACATG 59.390 47.619 30.11 18.73 0.00 3.21
1851 2049 0.610232 ACCCATGGCTTCTGAGTTGC 60.610 55.000 6.09 0.00 0.00 4.17
1866 2064 7.790782 AAATTATTTTTGAGGCTTCTACCCA 57.209 32.000 0.00 0.00 0.00 4.51
1874 2072 8.531982 GGAGAGGTTAAAATTATTTTTGAGGCT 58.468 33.333 8.28 0.00 35.82 4.58
1884 2083 3.436035 GGGGCGGGAGAGGTTAAAATTAT 60.436 47.826 0.00 0.00 0.00 1.28
1892 2091 0.697854 AATATGGGGCGGGAGAGGTT 60.698 55.000 0.00 0.00 0.00 3.50
1959 2158 4.442893 GGAATGAGACCACCAATATCGTCA 60.443 45.833 0.00 0.00 0.00 4.35
1962 2161 4.071961 TGGAATGAGACCACCAATATCG 57.928 45.455 0.00 0.00 32.03 2.92
1966 2165 4.387026 TCTTTGGAATGAGACCACCAAT 57.613 40.909 0.00 0.00 41.14 3.16
2072 2271 6.314896 CACTAGTAGTACTACTTTGTAGGCGT 59.685 42.308 34.30 17.71 43.35 5.68
2138 2337 4.039124 CCCTCTGCACAAAAATGGTTTAGT 59.961 41.667 0.00 0.00 0.00 2.24
2147 2346 2.136298 TGACACCCTCTGCACAAAAA 57.864 45.000 0.00 0.00 0.00 1.94
2192 2392 0.321034 ATTTGCAGCTCTGAGCACGA 60.321 50.000 29.49 18.29 45.56 4.35
2211 2411 3.196685 GCAAGAGGCCTAGAAGAAAGAGA 59.803 47.826 4.42 0.00 36.11 3.10
2247 2447 5.483685 AGGTCACAAGCTAAACTCATGTA 57.516 39.130 0.00 0.00 0.00 2.29
2253 2453 4.973168 TGATGAAGGTCACAAGCTAAACT 58.027 39.130 0.00 0.00 31.54 2.66
2301 2501 9.513906 TTTGTAATCAAAAGTGATAGGATGTCA 57.486 29.630 0.00 0.00 44.02 3.58
2303 2503 9.295825 TGTTTGTAATCAAAAGTGATAGGATGT 57.704 29.630 0.00 0.00 44.02 3.06
2332 2532 8.506168 ACGAACAATCATGTAATAAACCAGAT 57.494 30.769 0.00 0.00 39.40 2.90
2342 2542 6.403049 AGTATGTGGACGAACAATCATGTAA 58.597 36.000 0.00 0.00 39.40 2.41
2452 2652 6.799512 AGGCTTTGAAATATTCCTCAATTCG 58.200 36.000 3.92 0.00 31.85 3.34
2514 2714 5.510430 AGGAAGAGTATTTTGGGTTCATCC 58.490 41.667 0.00 0.00 0.00 3.51
2515 2715 8.575649 TTAAGGAAGAGTATTTTGGGTTCATC 57.424 34.615 0.00 0.00 0.00 2.92
2839 3041 5.489637 TGGTACCTGTAAGACACCCATTAAT 59.510 40.000 14.36 0.00 36.95 1.40
2870 3072 7.844493 TTATGTCCGTAATAGATAGGTTGGT 57.156 36.000 0.00 0.00 0.00 3.67
2881 3083 9.661563 ACAGAACAAAGAATTATGTCCGTAATA 57.338 29.630 0.00 0.00 24.90 0.98
2888 3090 7.587757 GTGTGTGACAGAACAAAGAATTATGTC 59.412 37.037 5.73 5.73 44.70 3.06
2948 3150 2.373169 TGCACAGATCTCCCTCTTGTTT 59.627 45.455 0.00 0.00 0.00 2.83
3007 3210 5.871524 TGCAATTCTCTACATCAAGTGAGAC 59.128 40.000 0.00 0.00 35.55 3.36
3052 3255 0.375106 GTAGCCAGATTTCGCACAGC 59.625 55.000 0.00 0.00 0.00 4.40
3055 3258 1.429148 CCCGTAGCCAGATTTCGCAC 61.429 60.000 0.00 0.00 0.00 5.34
3075 3278 2.103263 CCTATGCCACCTTCTCTACCAC 59.897 54.545 0.00 0.00 0.00 4.16
3106 3309 6.857964 GGCATCGGTATTTTCTGATTATTGTG 59.142 38.462 0.00 0.00 31.88 3.33
3107 3310 6.545666 TGGCATCGGTATTTTCTGATTATTGT 59.454 34.615 0.00 0.00 31.88 2.71
3218 3422 7.965718 TCACAAAAAGAATTGAAGGGATGAAT 58.034 30.769 0.00 0.00 34.38 2.57
3272 3476 7.571613 GCAAACCGTACAAAATCACTGTGTATA 60.572 37.037 7.79 0.00 30.87 1.47
3279 3483 2.295070 GGGCAAACCGTACAAAATCACT 59.705 45.455 0.00 0.00 36.48 3.41
3319 3523 3.443099 TGAGTCCGATGATGTGACATC 57.557 47.619 18.25 18.25 41.98 3.06
3379 3583 8.564574 TGCATACGAATATGAAAAGGGAAATAC 58.435 33.333 0.00 0.00 40.75 1.89
3381 3585 7.581213 TGCATACGAATATGAAAAGGGAAAT 57.419 32.000 0.00 0.00 40.75 2.17
3385 3589 8.647143 AAAAATGCATACGAATATGAAAAGGG 57.353 30.769 0.00 0.00 40.75 3.95
3386 3590 9.520204 AGAAAAATGCATACGAATATGAAAAGG 57.480 29.630 0.00 0.00 40.75 3.11
3521 3728 7.910162 CGTGTATAAAGATGTTGGATTCCAAAG 59.090 37.037 19.57 0.00 45.73 2.77
3533 3740 1.483415 ACCGGGCGTGTATAAAGATGT 59.517 47.619 6.32 0.00 0.00 3.06
3636 3843 9.304335 TCACGACCATACTAGGAATATTGAATA 57.696 33.333 0.00 0.00 0.00 1.75
3637 3844 8.088981 GTCACGACCATACTAGGAATATTGAAT 58.911 37.037 0.00 0.00 0.00 2.57
3654 3861 6.901081 ATATGAGAGAATATGTCACGACCA 57.099 37.500 0.00 0.00 33.33 4.02
3794 4001 7.550906 GCTAACTGAGGAAGATGTCACTATTTT 59.449 37.037 0.00 0.00 0.00 1.82
3803 4010 4.225942 TCAATGGCTAACTGAGGAAGATGT 59.774 41.667 0.00 0.00 0.00 3.06
3862 4069 7.117523 GGAGCTACATTGTACATGAAGATGATC 59.882 40.741 10.68 1.41 33.36 2.92
3927 4134 4.305539 AAAGTGGATGATGACATGTCCA 57.694 40.909 22.85 14.62 36.82 4.02
3963 4170 2.235650 TGAGATTCTGGTGAGGCAGAAG 59.764 50.000 0.00 0.00 40.27 2.85
3968 4175 2.777832 AACTGAGATTCTGGTGAGGC 57.222 50.000 0.00 0.00 0.00 4.70
4008 4445 1.957877 GTCGGGGAGAGAGTAATCCAG 59.042 57.143 0.00 0.00 37.33 3.86
4069 4508 8.905660 AATAATGATTTCCTCATCTGAGACAG 57.094 34.615 8.78 0.00 44.03 3.51
4077 4516 8.645110 ACCCATGAAAATAATGATTTCCTCATC 58.355 33.333 0.00 0.00 44.03 2.92
4087 4526 7.716799 ACTTAAGCACCCATGAAAATAATGA 57.283 32.000 1.29 0.00 0.00 2.57
4105 4544 6.443792 AGTTTAAATGGCGGACAAACTTAAG 58.556 36.000 0.00 0.00 36.33 1.85
4108 4547 4.929819 AGTTTAAATGGCGGACAAACTT 57.070 36.364 0.00 0.00 36.33 2.66
4116 4555 3.025287 AGCAACAAGTTTAAATGGCGG 57.975 42.857 0.00 0.00 0.00 6.13
4117 4556 4.083003 TCCTAGCAACAAGTTTAAATGGCG 60.083 41.667 0.00 0.00 0.00 5.69
4119 4558 6.863126 CACTTCCTAGCAACAAGTTTAAATGG 59.137 38.462 0.00 0.00 0.00 3.16
4138 4577 4.201657 GACTAGTCTCTAGGGACACTTCC 58.798 52.174 24.57 6.04 41.95 3.46
4142 4581 3.648507 TGGACTAGTCTCTAGGGACAC 57.351 52.381 24.57 12.05 38.57 3.67
4148 4587 9.877178 ATAACAACAAATTGGACTAGTCTCTAG 57.123 33.333 21.88 10.14 40.42 2.43
4149 4588 9.653287 CATAACAACAAATTGGACTAGTCTCTA 57.347 33.333 21.88 9.84 40.42 2.43
4153 4592 6.021596 CGCATAACAACAAATTGGACTAGTC 58.978 40.000 14.87 14.87 40.42 2.59
4154 4593 5.472137 ACGCATAACAACAAATTGGACTAGT 59.528 36.000 0.00 0.00 40.42 2.57
4155 4594 5.938322 ACGCATAACAACAAATTGGACTAG 58.062 37.500 0.00 0.00 40.42 2.57
4156 4595 5.950758 ACGCATAACAACAAATTGGACTA 57.049 34.783 0.00 0.00 40.42 2.59
4157 4596 4.846779 ACGCATAACAACAAATTGGACT 57.153 36.364 0.00 0.00 40.42 3.85
4158 4597 6.146898 ACTAACGCATAACAACAAATTGGAC 58.853 36.000 0.00 0.00 40.42 4.02
4159 4598 6.320494 ACTAACGCATAACAACAAATTGGA 57.680 33.333 0.00 0.00 40.42 3.53
4215 4654 4.885907 CCCTGCATGAATGATGTAGAGTTT 59.114 41.667 0.00 0.00 45.21 2.66
4238 4677 1.078759 CACCATTCTCTCGTCGTGCC 61.079 60.000 0.00 0.00 0.00 5.01
4242 4681 1.874019 CCGCACCATTCTCTCGTCG 60.874 63.158 0.00 0.00 0.00 5.12
4245 4684 1.811266 CCACCGCACCATTCTCTCG 60.811 63.158 0.00 0.00 0.00 4.04
4280 4719 5.841237 AGTGAGAAGCCTAGAGCCAATAATA 59.159 40.000 0.00 0.00 45.47 0.98
4281 4720 4.657969 AGTGAGAAGCCTAGAGCCAATAAT 59.342 41.667 0.00 0.00 45.47 1.28
4386 4826 2.923020 CAAAACGCCTCATTAACCATGC 59.077 45.455 0.00 0.00 32.13 4.06
4391 4831 3.004944 TCAACCCAAAACGCCTCATTAAC 59.995 43.478 0.00 0.00 0.00 2.01
4401 4841 6.017440 CCCTACATATATGTCAACCCAAAACG 60.017 42.308 21.49 0.00 41.97 3.60
4422 4863 1.553248 ACTTGTTCATACGCAGCCCTA 59.447 47.619 0.00 0.00 0.00 3.53
4499 4940 0.759346 ACCAACAGATAGATCCCCGC 59.241 55.000 0.00 0.00 0.00 6.13
4572 5013 8.477419 TTGAACCCATGAACTCTTAGATTTTT 57.523 30.769 0.00 0.00 0.00 1.94
4573 5014 7.725844 ACTTGAACCCATGAACTCTTAGATTTT 59.274 33.333 0.00 0.00 0.00 1.82
4574 5015 7.234355 ACTTGAACCCATGAACTCTTAGATTT 58.766 34.615 0.00 0.00 0.00 2.17
4575 5016 6.784031 ACTTGAACCCATGAACTCTTAGATT 58.216 36.000 0.00 0.00 0.00 2.40
4576 5017 6.380079 ACTTGAACCCATGAACTCTTAGAT 57.620 37.500 0.00 0.00 0.00 1.98
4577 5018 5.280011 GGACTTGAACCCATGAACTCTTAGA 60.280 44.000 0.00 0.00 0.00 2.10
4578 5019 4.938226 GGACTTGAACCCATGAACTCTTAG 59.062 45.833 0.00 0.00 0.00 2.18
4579 5020 4.597507 AGGACTTGAACCCATGAACTCTTA 59.402 41.667 0.00 0.00 0.00 2.10
4580 5021 3.395941 AGGACTTGAACCCATGAACTCTT 59.604 43.478 0.00 0.00 0.00 2.85
4581 5022 2.982488 AGGACTTGAACCCATGAACTCT 59.018 45.455 0.00 0.00 0.00 3.24
4582 5023 3.077359 CAGGACTTGAACCCATGAACTC 58.923 50.000 0.00 0.00 0.00 3.01
4583 5024 2.224867 CCAGGACTTGAACCCATGAACT 60.225 50.000 0.00 0.00 0.00 3.01
4584 5025 2.162681 CCAGGACTTGAACCCATGAAC 58.837 52.381 0.00 0.00 0.00 3.18
4585 5026 2.061848 TCCAGGACTTGAACCCATGAA 58.938 47.619 0.00 0.00 0.00 2.57
4586 5027 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
4587 5028 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
4588 5029 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
4589 5030 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
4590 5031 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
4591 5032 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
4592 5033 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
4593 5034 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
4594 5035 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
4595 5036 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
4596 5037 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
4597 5038 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
4598 5039 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
4599 5040 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
4600 5041 0.538057 TGCAAGAGGCTGTTTCCAGG 60.538 55.000 0.00 0.00 45.15 4.45
4601 5042 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
4602 5043 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
4603 5044 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
4613 5054 5.385198 ACCTTTCCTTACATTTCTGCAAGA 58.615 37.500 0.00 0.00 44.68 3.02
4614 5055 5.712152 ACCTTTCCTTACATTTCTGCAAG 57.288 39.130 0.00 0.00 0.00 4.01
4615 5056 5.738783 GCAACCTTTCCTTACATTTCTGCAA 60.739 40.000 0.00 0.00 0.00 4.08
4616 5057 4.261994 GCAACCTTTCCTTACATTTCTGCA 60.262 41.667 0.00 0.00 0.00 4.41
4617 5058 4.237724 GCAACCTTTCCTTACATTTCTGC 58.762 43.478 0.00 0.00 0.00 4.26
4618 5059 4.023193 ACGCAACCTTTCCTTACATTTCTG 60.023 41.667 0.00 0.00 0.00 3.02
4619 5060 4.142038 ACGCAACCTTTCCTTACATTTCT 58.858 39.130 0.00 0.00 0.00 2.52
4620 5061 4.499037 ACGCAACCTTTCCTTACATTTC 57.501 40.909 0.00 0.00 0.00 2.17
4621 5062 5.067954 AGTACGCAACCTTTCCTTACATTT 58.932 37.500 0.00 0.00 0.00 2.32
4622 5063 4.648651 AGTACGCAACCTTTCCTTACATT 58.351 39.130 0.00 0.00 0.00 2.71
4623 5064 4.281898 AGTACGCAACCTTTCCTTACAT 57.718 40.909 0.00 0.00 0.00 2.29
4624 5065 3.756933 AGTACGCAACCTTTCCTTACA 57.243 42.857 0.00 0.00 0.00 2.41
4625 5066 5.928264 TCTTTAGTACGCAACCTTTCCTTAC 59.072 40.000 0.00 0.00 0.00 2.34
4626 5067 5.928264 GTCTTTAGTACGCAACCTTTCCTTA 59.072 40.000 0.00 0.00 0.00 2.69
4627 5068 4.753610 GTCTTTAGTACGCAACCTTTCCTT 59.246 41.667 0.00 0.00 0.00 3.36
4628 5069 4.313282 GTCTTTAGTACGCAACCTTTCCT 58.687 43.478 0.00 0.00 0.00 3.36
4629 5070 3.434641 GGTCTTTAGTACGCAACCTTTCC 59.565 47.826 0.00 0.00 0.00 3.13
4630 5071 3.434641 GGGTCTTTAGTACGCAACCTTTC 59.565 47.826 6.11 0.00 0.00 2.62
4631 5072 3.181452 TGGGTCTTTAGTACGCAACCTTT 60.181 43.478 0.00 0.00 36.92 3.11
4632 5073 2.369532 TGGGTCTTTAGTACGCAACCTT 59.630 45.455 0.00 0.00 36.92 3.50
4633 5074 1.972795 TGGGTCTTTAGTACGCAACCT 59.027 47.619 0.00 0.00 36.92 3.50
4634 5075 2.460757 TGGGTCTTTAGTACGCAACC 57.539 50.000 0.00 0.00 36.92 3.77
4635 5076 3.811497 ACTTTGGGTCTTTAGTACGCAAC 59.189 43.478 5.36 0.00 45.77 4.17
4636 5077 3.810941 CACTTTGGGTCTTTAGTACGCAA 59.189 43.478 0.00 0.00 44.85 4.85
4637 5078 3.395639 CACTTTGGGTCTTTAGTACGCA 58.604 45.455 0.00 0.00 37.94 5.24
4638 5079 2.740447 CCACTTTGGGTCTTTAGTACGC 59.260 50.000 0.00 0.00 32.67 4.42
4639 5080 3.999046 ACCACTTTGGGTCTTTAGTACG 58.001 45.455 0.00 0.00 43.37 3.67
4649 5090 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
4650 5091 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
4651 5092 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
4652 5093 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
4653 5094 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
4654 5095 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
4655 5096 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
4656 5097 2.926242 TGGGAAGGGTCCGACCAC 60.926 66.667 19.43 8.70 46.04 4.16
4657 5098 2.606519 CTGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
4658 5099 1.916777 TTCTGGGAAGGGTCCGACC 60.917 63.158 9.30 9.30 46.04 4.79
4659 5100 1.295746 GTTCTGGGAAGGGTCCGAC 59.704 63.158 0.00 0.00 46.04 4.79
4660 5101 1.916777 GGTTCTGGGAAGGGTCCGA 60.917 63.158 0.00 0.00 46.04 4.55
4661 5102 2.669240 GGTTCTGGGAAGGGTCCG 59.331 66.667 0.00 0.00 46.04 4.79
4662 5103 1.541620 AGGGTTCTGGGAAGGGTCC 60.542 63.158 0.00 0.00 44.10 4.46
4663 5104 1.685820 CAGGGTTCTGGGAAGGGTC 59.314 63.158 0.00 0.00 37.36 4.46
4664 5105 2.539081 GCAGGGTTCTGGGAAGGGT 61.539 63.158 0.00 0.00 41.19 4.34
4665 5106 2.356667 GCAGGGTTCTGGGAAGGG 59.643 66.667 0.00 0.00 41.19 3.95
4671 5112 3.741476 GCTTGCGCAGGGTTCTGG 61.741 66.667 21.88 2.04 41.19 3.86
4672 5113 4.093952 CGCTTGCGCAGGGTTCTG 62.094 66.667 21.88 3.38 43.64 3.02
4679 5120 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
4682 5123 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
4683 5124 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
4684 5125 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
4685 5126 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
4691 5132 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
4692 5133 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
4693 5134 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
4694 5135 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
4695 5136 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
4730 5171 5.880901 AGTTGTTGAATGTGGGATTACTCT 58.119 37.500 0.00 0.00 0.00 3.24
4731 5172 6.206634 TCAAGTTGTTGAATGTGGGATTACTC 59.793 38.462 2.11 0.00 39.85 2.59
4733 5174 6.016276 ACTCAAGTTGTTGAATGTGGGATTAC 60.016 38.462 2.11 0.00 42.27 1.89
4747 5188 9.574516 AGAGGTGAAATATAAACTCAAGTTGTT 57.425 29.630 2.11 0.00 38.44 2.83
4749 5190 9.219603 TGAGAGGTGAAATATAAACTCAAGTTG 57.780 33.333 0.00 0.00 38.44 3.16
4769 5210 5.529791 TCGTCTAGTTTTTCAGTTGAGAGG 58.470 41.667 0.00 0.00 0.00 3.69
4779 5220 9.878599 TTGAGATTTTCATTCGTCTAGTTTTTC 57.121 29.630 0.00 0.00 35.27 2.29
4780 5221 9.665264 GTTGAGATTTTCATTCGTCTAGTTTTT 57.335 29.630 0.00 0.00 35.27 1.94
4795 5236 9.927668 TCCTTTATTTTCATGGTTGAGATTTTC 57.072 29.630 0.00 0.00 32.27 2.29
4800 5241 8.648698 TCAATCCTTTATTTTCATGGTTGAGA 57.351 30.769 0.00 0.00 32.27 3.27
4836 5277 3.618019 GCCAACTACTACCATCGGAACAA 60.618 47.826 0.00 0.00 0.00 2.83
4842 5283 2.872245 CCAATGCCAACTACTACCATCG 59.128 50.000 0.00 0.00 0.00 3.84
4879 5320 7.761651 ATGCTTTCTTGAAGACTTTTTGTTC 57.238 32.000 0.00 0.00 37.57 3.18
4888 5330 5.565638 GCTTTTCGTATGCTTTCTTGAAGAC 59.434 40.000 0.00 0.00 37.57 3.01
4915 5357 9.635404 TTTTGGGACTATTTCTAAAAGAACTCA 57.365 29.630 0.00 0.00 33.26 3.41
4985 5428 7.394816 TCTTGTATAGTTTTTCCCTTCTCCTG 58.605 38.462 0.00 0.00 0.00 3.86
5152 5597 6.095432 TGTTTTGGATAATGTGGTTTCCTG 57.905 37.500 0.00 0.00 0.00 3.86
5179 5630 7.554118 CACATTACCCTCATGAGACTATTTTGT 59.446 37.037 24.62 14.20 0.00 2.83
5182 5633 7.126421 AGACACATTACCCTCATGAGACTATTT 59.874 37.037 24.62 3.93 0.00 1.40
5197 5648 4.098807 ACAACCAAAACCAGACACATTACC 59.901 41.667 0.00 0.00 0.00 2.85
5305 5759 6.051717 TCTCAGTTTCCTCTTCTCTGTTTTG 58.948 40.000 0.00 0.00 0.00 2.44
5310 5764 5.605534 TGTTTCTCAGTTTCCTCTTCTCTG 58.394 41.667 0.00 0.00 0.00 3.35
5346 5800 2.633967 AGGCAAGGAAAAACATGCATGA 59.366 40.909 32.75 0.00 40.51 3.07
5360 5814 1.530013 CCAGTGCTCCAAAGGCAAGG 61.530 60.000 0.00 0.00 41.54 3.61
5361 5815 1.962144 CCAGTGCTCCAAAGGCAAG 59.038 57.895 0.00 0.00 41.54 4.01
5379 5833 2.295909 TGTGCCCTACAAATGTTCAAGC 59.704 45.455 0.00 0.00 36.06 4.01
5410 5864 2.544480 TTACGTCTGTGATGCTCTCG 57.456 50.000 0.00 0.00 0.00 4.04
5425 5879 3.763097 TGCTCAATCCAAGCATTTACG 57.237 42.857 0.00 0.00 44.51 3.18
5830 6327 9.945904 CTAGGAAGACCTTCAAGTTAAATAGTT 57.054 33.333 11.38 0.00 45.36 2.24
6334 6875 4.942481 TGTTCGTGACTGCGCGCT 62.942 61.111 33.29 13.70 46.94 5.92
6354 6897 4.845580 CAGGCCGCCGATGCTTCT 62.846 66.667 3.05 0.00 34.43 2.85
6843 7437 5.517770 GCATGCTACCAGAACAAAAATCATC 59.482 40.000 11.37 0.00 0.00 2.92
6972 7566 9.900710 AACATCGCTAGTTAATTAGTATCAGAG 57.099 33.333 6.84 0.00 0.00 3.35
7000 7594 3.033166 GCGCACACACACACACACA 62.033 57.895 0.30 0.00 0.00 3.72
7001 7595 2.277247 GCGCACACACACACACAC 60.277 61.111 0.30 0.00 0.00 3.82
7002 7596 3.858989 CGCGCACACACACACACA 61.859 61.111 8.75 0.00 0.00 3.72
7023 7617 3.242944 ACATCAATCATATATACGCGCGC 59.757 43.478 32.58 23.91 0.00 6.86
7024 7618 5.375544 AACATCAATCATATATACGCGCG 57.624 39.130 30.96 30.96 0.00 6.86
7025 7619 7.096599 ACGATAACATCAATCATATATACGCGC 60.097 37.037 5.73 0.00 0.00 6.86
7026 7620 8.270026 ACGATAACATCAATCATATATACGCG 57.730 34.615 3.53 3.53 0.00 6.01
7062 7656 6.846350 AGTTTCAACTGTTTGAGAAGACAAG 58.154 36.000 0.00 0.00 42.79 3.16
7067 7661 6.694411 CCAATGAGTTTCAACTGTTTGAGAAG 59.306 38.462 0.00 0.00 42.79 2.85
7073 7667 6.183360 CCTCTTCCAATGAGTTTCAACTGTTT 60.183 38.462 0.00 0.00 39.88 2.83
7095 7689 1.139853 ACTGGGAAGATCAATCGCCTC 59.860 52.381 11.40 0.00 0.00 4.70
7148 7742 6.710692 TGCGCACTGATAGTTGATAATATG 57.289 37.500 5.66 0.00 0.00 1.78
7149 7743 7.571983 GCTTTGCGCACTGATAGTTGATAATAT 60.572 37.037 11.12 0.00 38.92 1.28
7150 7744 6.292865 GCTTTGCGCACTGATAGTTGATAATA 60.293 38.462 11.12 0.00 38.92 0.98
7152 7746 4.201812 GCTTTGCGCACTGATAGTTGATAA 60.202 41.667 11.12 0.00 38.92 1.75
7165 7759 1.016627 TAGATGATGGCTTTGCGCAC 58.983 50.000 11.12 0.00 41.67 5.34
7166 7760 1.971481 ATAGATGATGGCTTTGCGCA 58.029 45.000 5.66 5.66 41.67 6.09
7169 7763 5.511234 AGTGAAATAGATGATGGCTTTGC 57.489 39.130 0.00 0.00 0.00 3.68
7178 7772 8.239314 GCATTTGACTTCAAGTGAAATAGATGA 58.761 33.333 13.81 0.00 39.43 2.92
7196 7790 4.298332 AGGTTCACGAAATTGCATTTGAC 58.702 39.130 0.00 0.00 31.47 3.18
7199 7793 4.582701 TGAGGTTCACGAAATTGCATTT 57.417 36.364 0.00 0.00 34.64 2.32
7205 7799 5.359860 AGTTTCCTTTGAGGTTCACGAAATT 59.640 36.000 0.00 0.00 36.53 1.82
7211 7805 8.942338 AAAATTAAGTTTCCTTTGAGGTTCAC 57.058 30.769 0.00 0.00 36.53 3.18
7213 7807 8.826710 CCAAAAATTAAGTTTCCTTTGAGGTTC 58.173 33.333 0.75 0.00 36.53 3.62
7218 7812 8.940952 CACAACCAAAAATTAAGTTTCCTTTGA 58.059 29.630 16.34 0.00 31.89 2.69
7228 7822 8.829612 AGCTCAATTTCACAACCAAAAATTAAG 58.170 29.630 0.00 0.00 32.76 1.85
7230 7824 8.203485 AGAGCTCAATTTCACAACCAAAAATTA 58.797 29.630 17.77 0.00 32.76 1.40
7234 7828 5.596836 AGAGCTCAATTTCACAACCAAAA 57.403 34.783 17.77 0.00 0.00 2.44
7247 7841 1.269831 GCCCGACGATAAGAGCTCAAT 60.270 52.381 17.77 8.98 0.00 2.57
7257 7851 2.092323 CTATCATGAGGCCCGACGATA 58.908 52.381 0.00 0.47 0.00 2.92
7261 7855 0.322975 ATGCTATCATGAGGCCCGAC 59.677 55.000 17.19 0.00 0.00 4.79
7264 7858 1.271054 ACGAATGCTATCATGAGGCCC 60.271 52.381 17.19 8.41 32.23 5.80
7268 7862 8.438513 CCATTACTTAACGAATGCTATCATGAG 58.561 37.037 0.09 0.00 32.69 2.90
7320 7914 5.444983 TCACAACAAAATACACATACACGC 58.555 37.500 0.00 0.00 0.00 5.34
7354 7954 9.841880 GGCGAAGAATCTTTAAAACTCTTAATT 57.158 29.630 0.00 0.00 0.00 1.40
7355 7955 9.010029 TGGCGAAGAATCTTTAAAACTCTTAAT 57.990 29.630 0.00 0.00 0.00 1.40
7356 7956 8.385898 TGGCGAAGAATCTTTAAAACTCTTAA 57.614 30.769 0.00 0.00 0.00 1.85
7402 8004 5.053978 AGGTTGGAAGATGAACTCTTTGT 57.946 39.130 0.00 0.00 44.42 2.83
7410 8012 9.042450 TCTACTATACAAAGGTTGGAAGATGAA 57.958 33.333 0.00 0.00 34.12 2.57
7414 8016 8.375493 ACATCTACTATACAAAGGTTGGAAGA 57.625 34.615 0.00 0.00 34.12 2.87
7415 8017 9.530633 GTACATCTACTATACAAAGGTTGGAAG 57.469 37.037 0.00 0.00 34.12 3.46
7425 8027 8.522003 TGTCGGTTTTGTACATCTACTATACAA 58.478 33.333 0.00 0.00 37.10 2.41
7428 8030 8.522003 TGTTGTCGGTTTTGTACATCTACTATA 58.478 33.333 0.00 0.00 0.00 1.31
7431 8033 5.603596 TGTTGTCGGTTTTGTACATCTACT 58.396 37.500 0.00 0.00 0.00 2.57
7434 8036 5.992829 TGTATGTTGTCGGTTTTGTACATCT 59.007 36.000 0.00 0.00 0.00 2.90
7443 8045 5.821516 TTCTGTTTGTATGTTGTCGGTTT 57.178 34.783 0.00 0.00 0.00 3.27
7448 8050 6.131544 AGGTGTTTCTGTTTGTATGTTGTC 57.868 37.500 0.00 0.00 0.00 3.18
7449 8051 7.051623 TCTAGGTGTTTCTGTTTGTATGTTGT 58.948 34.615 0.00 0.00 0.00 3.32
7485 8087 5.422331 TCACCTCCTCTTCGATTGTCTTTAT 59.578 40.000 0.00 0.00 0.00 1.40
7493 8095 4.895889 TGATATGTCACCTCCTCTTCGATT 59.104 41.667 0.00 0.00 0.00 3.34
7496 8098 4.862902 ATGATATGTCACCTCCTCTTCG 57.137 45.455 0.00 0.00 37.14 3.79
7581 8184 9.880157 TGTAGTTTTTACTTCTAGTGTTCTTGT 57.120 29.630 0.00 0.00 0.00 3.16
7629 8237 2.946329 CTCCAGTGCTAGTAGTCATCGT 59.054 50.000 0.00 0.00 0.00 3.73
7651 8259 3.430862 GGCGATGCGTTTGGCTCA 61.431 61.111 0.00 0.00 44.05 4.26
7657 8265 3.665226 TTTGCCGGCGATGCGTTT 61.665 55.556 23.90 0.00 0.00 3.60
7668 8305 3.395639 TCTACTACAACAAGGTTTGCCG 58.604 45.455 0.00 0.00 40.50 5.69
7690 8327 1.816835 AGCATGACGACTTTCCGACTA 59.183 47.619 0.00 0.00 0.00 2.59
7749 8386 0.176680 ACGCTTCTCTTCATCGGCAT 59.823 50.000 0.00 0.00 0.00 4.40
7750 8387 0.815095 TACGCTTCTCTTCATCGGCA 59.185 50.000 0.00 0.00 0.00 5.69
7787 8424 6.451064 TCATCTGTATTCGTGTGTCTACAT 57.549 37.500 0.00 0.00 39.39 2.29
7802 8439 4.864806 GCATTCTGTCTTCGTTCATCTGTA 59.135 41.667 0.00 0.00 0.00 2.74
7808 8445 1.792367 CGTGCATTCTGTCTTCGTTCA 59.208 47.619 0.00 0.00 0.00 3.18
7842 8479 2.349438 CGGAATTCGGTCGGCATTTATG 60.349 50.000 4.90 0.00 34.75 1.90
7844 8481 1.292061 CGGAATTCGGTCGGCATTTA 58.708 50.000 4.90 0.00 34.75 1.40
7864 8501 2.094700 GGTTTTTCTCTGGCGGATTTCC 60.095 50.000 0.00 0.00 0.00 3.13
7880 8517 2.241176 TCAGAGGGTGTGTGAAGGTTTT 59.759 45.455 0.00 0.00 0.00 2.43
7893 8530 2.145397 TTCTAGCATCGTCAGAGGGT 57.855 50.000 0.00 0.00 41.92 4.34
7919 8557 1.000019 CACCTAGTCCCTGTCCGGA 60.000 63.158 0.00 0.00 33.16 5.14
7921 8559 2.058595 CCCACCTAGTCCCTGTCCG 61.059 68.421 0.00 0.00 0.00 4.79
7926 8564 0.042881 GGTTCTCCCACCTAGTCCCT 59.957 60.000 0.00 0.00 33.50 4.20
7975 8617 2.325484 TGTCCTACTCAGTGAGGCAAA 58.675 47.619 23.79 4.43 33.35 3.68
7977 8619 2.009681 TTGTCCTACTCAGTGAGGCA 57.990 50.000 23.79 10.41 33.35 4.75
7983 8625 5.131475 TGTTAGGGTTTTTGTCCTACTCAGT 59.869 40.000 0.00 0.00 35.56 3.41
8042 8684 2.202236 GATCCTGACCCTTGCTGGCA 62.202 60.000 0.00 0.00 0.00 4.92
8056 8698 0.325671 ATGGAGACGTGGTGGATCCT 60.326 55.000 14.23 0.00 37.07 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.