Multiple sequence alignment - TraesCS3A01G025700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G025700 chr3A 100.000 5144 0 0 1 5144 13513512 13518655 0.000000e+00 9500
1 TraesCS3A01G025700 chr3D 91.247 4604 226 67 625 5132 6733889 6729367 0.000000e+00 6106
2 TraesCS3A01G025700 chr3D 90.315 857 57 6 3165 4021 47797276 47796446 0.000000e+00 1099
3 TraesCS3A01G025700 chr3D 83.849 1034 78 45 1 989 6736025 6735036 0.000000e+00 902
4 TraesCS3A01G025700 chr3B 93.404 3002 146 17 2162 5144 8135703 8132735 0.000000e+00 4399
5 TraesCS3A01G025700 chr3B 89.008 1119 42 33 584 1652 8137830 8136743 0.000000e+00 1310
6 TraesCS3A01G025700 chr3B 87.433 557 39 14 1654 2183 8136702 8136150 3.400000e-171 612
7 TraesCS3A01G025700 chr6B 91.830 306 25 0 3165 3470 42645949 42645644 1.320000e-115 427
8 TraesCS3A01G025700 chrUn 93.396 106 7 0 974 1079 208385887 208385782 1.920000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G025700 chr3A 13513512 13518655 5143 False 9500 9500 100.000000 1 5144 1 chr3A.!!$F1 5143
1 TraesCS3A01G025700 chr3D 6729367 6736025 6658 True 3504 6106 87.548000 1 5132 2 chr3D.!!$R2 5131
2 TraesCS3A01G025700 chr3D 47796446 47797276 830 True 1099 1099 90.315000 3165 4021 1 chr3D.!!$R1 856
3 TraesCS3A01G025700 chr3B 8132735 8137830 5095 True 2107 4399 89.948333 584 5144 3 chr3B.!!$R1 4560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
962 2520 0.109412 CGAGCTAGGGTTCGTTCGTT 60.109 55.000 0.00 0.0 40.42 3.85 F
1634 3223 0.172803 ACGCGGATGACTGGTAAGAC 59.827 55.000 12.47 0.0 0.00 3.01 F
1930 3597 1.807142 GCGCTTAGACTTGCCTTTCTT 59.193 47.619 0.00 0.0 0.00 2.52 F
3901 6043 1.432514 TGAGAAAGATGACTGCGTGC 58.567 50.000 0.00 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 3506 0.108615 TGCGCTCCTTACTGCTCTTC 60.109 55.000 9.73 0.0 0.00 2.87 R
2515 4651 1.001764 TAAGAGTCGTCCGCTCCCA 60.002 57.895 7.26 0.0 33.69 4.37 R
3916 6058 1.278985 TGCACAGGTAACATCAGAGGG 59.721 52.381 0.00 0.0 41.41 4.30 R
4793 6960 0.312416 CCGAGGATGAGGACGATGAC 59.688 60.000 0.00 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.176546 CTCCGTTGTGGCGCATTG 59.823 61.111 10.83 0.00 37.80 2.82
21 22 3.951655 CTCCGTTGTGGCGCATTGC 62.952 63.158 10.83 0.00 45.38 3.56
54 56 2.063015 ATCCGTGTTGTTGCCCCTCA 62.063 55.000 0.00 0.00 0.00 3.86
57 59 2.203280 TGTTGTTGCCCCTCACCG 60.203 61.111 0.00 0.00 0.00 4.94
58 60 3.670377 GTTGTTGCCCCTCACCGC 61.670 66.667 0.00 0.00 0.00 5.68
96 98 2.542178 CGTCTAGATCTCTCAGGACACG 59.458 54.545 0.00 0.00 0.00 4.49
98 100 3.942748 GTCTAGATCTCTCAGGACACGTT 59.057 47.826 0.00 0.00 0.00 3.99
115 117 0.917333 GTTACCCCCTCCCACATCCA 60.917 60.000 0.00 0.00 0.00 3.41
129 131 1.768275 ACATCCACTCCACTTGTGTCA 59.232 47.619 0.00 0.00 33.92 3.58
198 200 6.777213 GGAGTACTTCCTCTATGAGTTTGA 57.223 41.667 0.00 0.00 43.16 2.69
228 230 0.541863 CGCCTCACTGGTTCCCTATT 59.458 55.000 0.00 0.00 38.35 1.73
229 231 1.065418 CGCCTCACTGGTTCCCTATTT 60.065 52.381 0.00 0.00 38.35 1.40
231 233 2.290960 GCCTCACTGGTTCCCTATTTGT 60.291 50.000 0.00 0.00 38.35 2.83
235 237 3.091545 CACTGGTTCCCTATTTGTGCAT 58.908 45.455 0.00 0.00 0.00 3.96
246 248 0.392336 TTTGTGCATTGCAAGGGACC 59.608 50.000 28.77 14.07 41.47 4.46
252 254 2.934838 ATTGCAAGGGACCCAGGGG 61.935 63.158 14.60 6.87 42.03 4.79
260 262 1.004436 GGGACCCAGGGGATACAAAA 58.996 55.000 11.37 0.00 38.96 2.44
262 264 1.063942 GGACCCAGGGGATACAAAAGG 60.064 57.143 11.37 0.00 38.96 3.11
263 265 1.007607 ACCCAGGGGATACAAAAGGG 58.992 55.000 11.37 0.00 40.50 3.95
264 266 0.261696 CCCAGGGGATACAAAAGGGG 59.738 60.000 0.00 0.00 37.50 4.79
265 267 0.261696 CCAGGGGATACAAAAGGGGG 59.738 60.000 0.00 0.00 39.74 5.40
283 285 4.391405 GGGGGAAACATAAAGAAGCATG 57.609 45.455 0.00 0.00 0.00 4.06
284 286 4.023291 GGGGGAAACATAAAGAAGCATGA 58.977 43.478 0.00 0.00 0.00 3.07
285 287 4.651045 GGGGGAAACATAAAGAAGCATGAT 59.349 41.667 0.00 0.00 0.00 2.45
286 288 5.221322 GGGGGAAACATAAAGAAGCATGATC 60.221 44.000 0.00 0.00 0.00 2.92
287 289 5.595952 GGGGAAACATAAAGAAGCATGATCT 59.404 40.000 0.00 0.00 0.00 2.75
288 290 6.238869 GGGGAAACATAAAGAAGCATGATCTC 60.239 42.308 0.00 0.00 0.00 2.75
289 291 6.319658 GGGAAACATAAAGAAGCATGATCTCA 59.680 38.462 0.00 0.00 0.00 3.27
290 292 7.192232 GGAAACATAAAGAAGCATGATCTCAC 58.808 38.462 0.00 0.00 0.00 3.51
291 293 5.980698 ACATAAAGAAGCATGATCTCACG 57.019 39.130 0.00 0.00 0.00 4.35
296 298 2.428530 AGAAGCATGATCTCACGCACTA 59.571 45.455 0.00 0.00 37.55 2.74
323 325 1.237285 GGCCTTGCGTGTCAGTGAAT 61.237 55.000 0.00 0.00 0.00 2.57
332 334 4.214437 GCGTGTCAGTGAATTTTGAGAAG 58.786 43.478 0.00 0.00 0.00 2.85
334 336 4.260743 CGTGTCAGTGAATTTTGAGAAGCA 60.261 41.667 0.00 0.00 0.00 3.91
340 342 4.581824 AGTGAATTTTGAGAAGCAAGAGCA 59.418 37.500 0.00 0.00 45.49 4.26
341 343 4.916249 GTGAATTTTGAGAAGCAAGAGCAG 59.084 41.667 0.00 0.00 45.49 4.24
369 372 1.667722 GCAAAGTTTGAGGGGCCAG 59.332 57.895 19.82 0.00 0.00 4.85
380 383 2.293586 TGAGGGGCCAGGAAGTATTAGT 60.294 50.000 4.39 0.00 0.00 2.24
383 386 3.043418 GGGGCCAGGAAGTATTAGTGTA 58.957 50.000 4.39 0.00 0.00 2.90
400 403 5.523883 AGTGTACCCCTTAAAAGCCATTA 57.476 39.130 0.00 0.00 0.00 1.90
404 407 7.128263 AGTGTACCCCTTAAAAGCCATTATAGA 59.872 37.037 0.00 0.00 0.00 1.98
426 429 3.992260 TGGGTTGGTGTAACATTTTCG 57.008 42.857 0.00 0.00 41.18 3.46
430 433 5.359009 TGGGTTGGTGTAACATTTTCGTAAA 59.641 36.000 0.00 0.00 41.18 2.01
431 434 6.040616 TGGGTTGGTGTAACATTTTCGTAAAT 59.959 34.615 0.00 0.00 41.18 1.40
434 437 8.481641 GGTTGGTGTAACATTTTCGTAAATTTC 58.518 33.333 0.00 0.00 41.18 2.17
439 442 8.627428 GTGTAACATTTTCGTAAATTTCTGAGC 58.373 33.333 0.00 0.00 36.32 4.26
484 487 6.976934 TTTTCCCAGGATTTTCCATATAGC 57.023 37.500 0.00 0.00 39.61 2.97
488 491 6.682537 TCCCAGGATTTTCCATATAGCTTTT 58.317 36.000 0.00 0.00 39.61 2.27
545 548 8.053026 AGATGCATCAGGAATTTTCATATAGC 57.947 34.615 27.81 0.00 0.00 2.97
546 549 7.668469 AGATGCATCAGGAATTTTCATATAGCA 59.332 33.333 27.81 0.00 0.00 3.49
547 550 7.210718 TGCATCAGGAATTTTCATATAGCAG 57.789 36.000 0.00 0.00 0.00 4.24
549 552 7.938490 TGCATCAGGAATTTTCATATAGCAGTA 59.062 33.333 0.00 0.00 0.00 2.74
550 553 8.233190 GCATCAGGAATTTTCATATAGCAGTAC 58.767 37.037 0.00 0.00 0.00 2.73
551 554 9.499479 CATCAGGAATTTTCATATAGCAGTACT 57.501 33.333 0.00 0.00 0.00 2.73
553 556 9.982651 TCAGGAATTTTCATATAGCAGTACTAC 57.017 33.333 0.00 0.00 32.32 2.73
554 557 9.988815 CAGGAATTTTCATATAGCAGTACTACT 57.011 33.333 0.31 0.31 32.32 2.57
598 639 4.041567 ACTCCAATATGGGCGATCACATTA 59.958 41.667 0.00 0.00 38.32 1.90
612 653 3.772387 TCACATTACCCATGCCAAAAGA 58.228 40.909 0.00 0.00 36.14 2.52
615 656 1.540267 TTACCCATGCCAAAAGACCG 58.460 50.000 0.00 0.00 0.00 4.79
647 688 3.647771 GACCAACGGCCTTCCCCT 61.648 66.667 0.00 0.00 0.00 4.79
687 732 1.301401 CGTCTCCCGCAAAGGACAA 60.301 57.895 0.00 0.00 45.00 3.18
688 733 1.291877 CGTCTCCCGCAAAGGACAAG 61.292 60.000 0.00 0.00 45.00 3.16
689 734 1.302511 TCTCCCGCAAAGGACAAGC 60.303 57.895 0.00 0.00 45.00 4.01
690 735 2.282180 TCCCGCAAAGGACAAGCC 60.282 61.111 0.00 0.00 45.00 4.35
692 737 2.282462 CCGCAAAGGACAAGCCCT 60.282 61.111 0.00 0.00 45.00 5.19
693 738 2.335712 CCGCAAAGGACAAGCCCTC 61.336 63.158 0.00 0.00 45.00 4.30
695 740 1.228552 GCAAAGGACAAGCCCTCCA 60.229 57.895 0.00 0.00 34.95 3.86
696 741 1.527433 GCAAAGGACAAGCCCTCCAC 61.527 60.000 0.00 0.00 34.95 4.02
701 746 3.316573 GACAAGCCCTCCACCCTCG 62.317 68.421 0.00 0.00 0.00 4.63
717 762 2.824041 CGCCGATCCCACCCAAAG 60.824 66.667 0.00 0.00 0.00 2.77
957 2515 3.823330 CGGCGAGCTAGGGTTCGT 61.823 66.667 0.00 0.00 45.56 3.85
958 2516 2.577593 GGCGAGCTAGGGTTCGTT 59.422 61.111 0.00 0.00 45.56 3.85
959 2517 1.518792 GGCGAGCTAGGGTTCGTTC 60.519 63.158 0.00 0.00 45.56 3.95
960 2518 1.872679 GCGAGCTAGGGTTCGTTCG 60.873 63.158 0.00 0.00 45.56 3.95
961 2519 1.505353 CGAGCTAGGGTTCGTTCGT 59.495 57.895 0.00 0.00 40.42 3.85
962 2520 0.109412 CGAGCTAGGGTTCGTTCGTT 60.109 55.000 0.00 0.00 40.42 3.85
963 2521 1.626747 GAGCTAGGGTTCGTTCGTTC 58.373 55.000 0.00 0.00 0.00 3.95
964 2522 0.109412 AGCTAGGGTTCGTTCGTTCG 60.109 55.000 0.00 0.00 0.00 3.95
1262 2840 4.824515 CGCCTCCTCCTCCTCCGT 62.825 72.222 0.00 0.00 0.00 4.69
1360 2939 2.730733 GGATCCGCTGCGATCTGA 59.269 61.111 25.45 12.53 38.97 3.27
1366 2945 0.531532 CCGCTGCGATCTGATTCCTT 60.532 55.000 25.45 0.00 0.00 3.36
1367 2946 1.293924 CGCTGCGATCTGATTCCTTT 58.706 50.000 18.66 0.00 0.00 3.11
1373 2956 2.792116 GCGATCTGATTCCTTTCGTCTC 59.208 50.000 0.00 0.00 32.65 3.36
1416 2999 0.612174 TCCATCGATCGATCTCCCCC 60.612 60.000 27.20 0.00 31.62 5.40
1431 3014 1.203162 TCCCCCACACAATTGCATTCT 60.203 47.619 5.05 0.00 0.00 2.40
1490 3073 3.308323 GCTGAGTGGATCGAAATTGTCTC 59.692 47.826 0.00 0.00 0.00 3.36
1491 3074 3.511699 TGAGTGGATCGAAATTGTCTCG 58.488 45.455 0.00 0.00 37.66 4.04
1606 3195 5.230942 CGAAGACCTAGCTAATTACCATGG 58.769 45.833 11.19 11.19 0.00 3.66
1634 3223 0.172803 ACGCGGATGACTGGTAAGAC 59.827 55.000 12.47 0.00 0.00 3.01
1694 3335 6.697152 CGCTAAGATTTAGTTAGAGCAACAC 58.303 40.000 0.00 0.00 39.81 3.32
1701 3342 9.289782 AGATTTAGTTAGAGCAACACATTTTCT 57.710 29.630 0.00 0.00 39.81 2.52
1705 3346 3.360249 AGAGCAACACATTTTCTGCAC 57.640 42.857 0.00 0.00 37.26 4.57
1734 3375 8.629158 CCGGATGTTGAATCTTAATAAATGGAA 58.371 33.333 0.00 0.00 0.00 3.53
1765 3407 7.621796 AGCATTTAGGTTGTAGCTTAGTTAGT 58.378 34.615 0.00 0.00 0.00 2.24
1767 3409 8.815189 GCATTTAGGTTGTAGCTTAGTTAGTAC 58.185 37.037 0.00 0.00 0.00 2.73
1772 3414 6.666546 AGGTTGTAGCTTAGTTAGTACCATGA 59.333 38.462 0.00 0.00 0.00 3.07
1776 3418 8.074613 TGTAGCTTAGTTAGTACCATGACAAT 57.925 34.615 0.00 0.00 0.00 2.71
1789 3431 4.130118 CCATGACAATACCAGTAAGGAGC 58.870 47.826 0.00 0.00 41.22 4.70
1790 3432 4.384098 CCATGACAATACCAGTAAGGAGCA 60.384 45.833 0.00 0.00 41.22 4.26
1804 3446 2.719739 AGGAGCACAATCAACCTGATG 58.280 47.619 0.00 0.00 37.15 3.07
1823 3465 7.069085 ACCTGATGTTGAATCTTAATTGATGGG 59.931 37.037 0.00 0.00 0.00 4.00
1831 3473 8.999905 TGAATCTTAATTGATGGGATCATGAA 57.000 30.769 0.00 0.00 39.39 2.57
1851 3517 4.019411 TGAACATCATGGGAAGAGCAGTAA 60.019 41.667 0.00 0.00 0.00 2.24
1871 3537 2.108168 AGGAGCGCAATCAAGGTACTA 58.892 47.619 11.47 0.00 38.49 1.82
1879 3545 2.533266 ATCAAGGTACTATGCTGCCG 57.467 50.000 0.00 0.00 38.49 5.69
1891 3557 4.821805 ACTATGCTGCCGCTTAATAAATGT 59.178 37.500 0.70 0.00 36.97 2.71
1902 3568 7.148934 GCCGCTTAATAAATGTAAAACAAACGT 60.149 33.333 0.00 0.00 0.00 3.99
1930 3597 1.807142 GCGCTTAGACTTGCCTTTCTT 59.193 47.619 0.00 0.00 0.00 2.52
1934 3601 3.815401 GCTTAGACTTGCCTTTCTTGTGA 59.185 43.478 0.00 0.00 0.00 3.58
2024 3691 4.919774 TTGGAGTTTGGCTGGTATAAGA 57.080 40.909 0.00 0.00 0.00 2.10
2132 3800 3.505293 GCTGTTTCTTGCCTTTCTCAGAT 59.495 43.478 0.00 0.00 0.00 2.90
2159 3828 5.105917 GCCTTCTCGTGGGAAAATATTTGAA 60.106 40.000 0.39 0.00 0.00 2.69
2162 3831 8.034804 CCTTCTCGTGGGAAAATATTTGAAAAT 58.965 33.333 0.39 0.00 0.00 1.82
2229 4365 9.461312 TGTTTTCTATTGTAGTTTGGCTGATAT 57.539 29.630 0.00 0.00 0.00 1.63
2244 4380 4.511826 GGCTGATATAAGCTTGTGTACACC 59.488 45.833 22.91 8.04 43.06 4.16
2281 4417 7.792374 AATGAATATCACAACTCATAGCGTT 57.208 32.000 0.00 0.00 0.00 4.84
2295 4431 4.690748 TCATAGCGTTGTCCTTTTTCTCTG 59.309 41.667 0.00 0.00 0.00 3.35
2349 4485 3.759086 TCTTGCAGCTATCTATAGTCGGG 59.241 47.826 0.00 0.00 32.96 5.14
2363 4499 3.947612 AGTCGGGGATTCTGTAGAGTA 57.052 47.619 0.00 0.00 0.00 2.59
2366 4502 4.141228 AGTCGGGGATTCTGTAGAGTATCA 60.141 45.833 8.46 0.00 37.82 2.15
2370 4506 5.768662 CGGGGATTCTGTAGAGTATCACTTA 59.231 44.000 8.37 0.00 37.82 2.24
2472 4608 3.057526 GGCTGGACGAAAAACTTATGCTT 60.058 43.478 0.00 0.00 0.00 3.91
2497 4633 3.064324 GATTTGCCCGGCTGCAGT 61.064 61.111 16.64 0.00 43.21 4.40
2515 4651 4.283467 TGCAGTGTACTTGACATAGGAACT 59.717 41.667 0.00 0.00 41.14 3.01
2594 4730 5.818857 GGACACTGACTAACTTGTTGGTTTA 59.181 40.000 4.13 0.00 0.00 2.01
2607 4743 4.683832 TGTTGGTTTACATTTCCCAAACG 58.316 39.130 0.00 0.00 38.61 3.60
2643 4779 9.764870 CATGAATATTACTGTTGTCAACTTCAG 57.235 33.333 16.45 8.44 0.00 3.02
2741 4877 9.009327 CCTACATAAACAAAGCATACGATTTTG 57.991 33.333 0.00 0.00 37.71 2.44
2927 5063 3.403968 TGTCGCAATTAGTGGCAAGTTA 58.596 40.909 0.00 0.00 39.84 2.24
2988 5126 9.056005 TGTATGACATGTTAAAAGATATGGAGC 57.944 33.333 0.00 0.00 0.00 4.70
3070 5208 8.354011 ACTTTGAAATAGTCATACGATACTGC 57.646 34.615 0.00 0.00 35.70 4.40
3071 5209 8.198109 ACTTTGAAATAGTCATACGATACTGCT 58.802 33.333 0.00 0.00 35.70 4.24
3072 5210 8.942338 TTTGAAATAGTCATACGATACTGCTT 57.058 30.769 0.00 0.00 35.70 3.91
3073 5211 8.942338 TTGAAATAGTCATACGATACTGCTTT 57.058 30.769 0.00 0.00 35.70 3.51
3074 5212 8.942338 TGAAATAGTCATACGATACTGCTTTT 57.058 30.769 0.00 0.00 0.00 2.27
3102 5240 2.225467 GAGGAAGATTATGCTGGCACC 58.775 52.381 0.00 0.00 0.00 5.01
3145 5286 2.632987 AAGGCGTCTTGGTGTTAGTT 57.367 45.000 0.00 0.00 0.00 2.24
3220 5361 2.639839 ACACCTCTTGGCAGTACTGATT 59.360 45.455 27.08 0.00 36.63 2.57
3224 5365 4.074970 CCTCTTGGCAGTACTGATTTGTT 58.925 43.478 27.08 0.00 0.00 2.83
3299 5440 1.967319 TTGAGCTTGCTCGAAACCTT 58.033 45.000 16.48 0.00 0.00 3.50
3424 5566 4.253685 GCCTTCTTGTGCTTCAGTATGTA 58.746 43.478 0.00 0.00 37.40 2.29
3448 5590 3.516300 TGTTGAACATAGTGTCCCCGTAT 59.484 43.478 0.00 0.00 0.00 3.06
3523 5665 2.932614 GGTTGATGATGTTCTGGAGTCG 59.067 50.000 0.00 0.00 0.00 4.18
3562 5704 3.689347 TGAACTTGTGATGGATGAAGGG 58.311 45.455 0.00 0.00 0.00 3.95
3694 5836 5.240623 TCATAGCTGTGGTTTAACACTTTGG 59.759 40.000 10.87 0.00 41.84 3.28
3763 5905 6.475402 GCTTCCATGTATTAATTTGTTTCCGG 59.525 38.462 0.00 0.00 0.00 5.14
3841 5983 2.481449 GGCATACTGGTCAGTACTTCCG 60.481 54.545 12.40 0.00 45.61 4.30
3860 6002 4.006989 TCCGTTGCATTTGTTAGCAGTAT 58.993 39.130 0.00 0.00 42.39 2.12
3901 6043 1.432514 TGAGAAAGATGACTGCGTGC 58.567 50.000 0.00 0.00 0.00 5.34
3916 6058 3.768406 TGCGTGCAAATCAATGGATTAC 58.232 40.909 0.00 0.00 42.87 1.89
4044 6186 2.317371 TGGTCTCTGAAGGAGCTCTT 57.683 50.000 14.64 2.08 41.60 2.85
4080 6222 2.401351 GTGTTCAAGTACCTCGACCAC 58.599 52.381 0.00 0.00 0.00 4.16
4108 6250 2.674747 GCTTACCCAAACGTCGATGGTA 60.675 50.000 9.90 10.41 34.79 3.25
4300 6451 5.765182 GTGCTTTGTTATGGCTGGATATACT 59.235 40.000 0.00 0.00 0.00 2.12
4453 6620 1.059098 TGAGTTGCAGGATCACAGGT 58.941 50.000 0.00 0.00 0.00 4.00
4524 6691 2.925724 CTCTCGAGTACATGGGAGAGT 58.074 52.381 13.13 0.00 44.66 3.24
4586 6753 4.081862 GTGGTATGTACAGAGCCACTACAA 60.082 45.833 26.04 6.35 44.35 2.41
4590 6757 4.720649 TGTACAGAGCCACTACAATCTC 57.279 45.455 0.00 0.00 0.00 2.75
4746 6913 1.208776 GGATAAGGCGTGGTTGGTAGT 59.791 52.381 0.00 0.00 0.00 2.73
4752 6919 1.736645 CGTGGTTGGTAGTGAGGCG 60.737 63.158 0.00 0.00 0.00 5.52
4785 6952 0.537188 GTCGGCATCCTCTTCTTCCA 59.463 55.000 0.00 0.00 0.00 3.53
4790 6957 1.472376 GCATCCTCTTCTTCCACCTCG 60.472 57.143 0.00 0.00 0.00 4.63
4793 6960 0.171455 CCTCTTCTTCCACCTCGTCG 59.829 60.000 0.00 0.00 0.00 5.12
4796 6963 0.596577 CTTCTTCCACCTCGTCGTCA 59.403 55.000 0.00 0.00 0.00 4.35
4805 6972 1.366854 CCTCGTCGTCATCGTCCTCA 61.367 60.000 0.00 0.00 38.33 3.86
4860 7027 2.642311 TGGTTTCCCTGCAGTATCAAGA 59.358 45.455 13.81 0.00 0.00 3.02
4880 7047 5.056553 AGAGATCTAGACCCCAGAGTTAC 57.943 47.826 0.00 0.00 0.00 2.50
4892 7059 3.372206 CCCAGAGTTACGCATCAGAAAAG 59.628 47.826 0.00 0.00 0.00 2.27
4968 7143 5.103643 ACTGGTATCAGGATCACTACACCTA 60.104 44.000 8.13 0.00 44.99 3.08
5005 7180 2.559668 CAACAATGGCTGGTCATTCAGT 59.440 45.455 0.00 0.00 35.40 3.41
5010 7185 1.629861 TGGCTGGTCATTCAGTGATGA 59.370 47.619 0.00 0.00 39.48 2.92
5012 7187 2.286872 GCTGGTCATTCAGTGATGAGG 58.713 52.381 0.00 0.00 39.48 3.86
5071 7246 2.306805 TGCTCTCACCATCACCAAGATT 59.693 45.455 0.00 0.00 33.72 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 1.814292 ATGTTGTGGGAGGGGGCAAT 61.814 55.000 0.00 0.00 0.00 3.56
20 21 2.043953 GATGTTGTGGGAGGGGGC 60.044 66.667 0.00 0.00 0.00 5.80
21 22 2.683475 GGATGTTGTGGGAGGGGG 59.317 66.667 0.00 0.00 0.00 5.40
22 23 2.272146 CGGATGTTGTGGGAGGGG 59.728 66.667 0.00 0.00 0.00 4.79
96 98 0.917333 TGGATGTGGGAGGGGGTAAC 60.917 60.000 0.00 0.00 0.00 2.50
98 100 1.307517 GTGGATGTGGGAGGGGGTA 60.308 63.158 0.00 0.00 0.00 3.69
115 117 0.320771 GGCGATGACACAAGTGGAGT 60.321 55.000 5.08 0.00 34.19 3.85
188 190 3.948473 CGACTCTCCTCCTCAAACTCATA 59.052 47.826 0.00 0.00 0.00 2.15
194 196 0.251832 AGGCGACTCTCCTCCTCAAA 60.252 55.000 0.00 0.00 32.90 2.69
196 198 3.091694 AGGCGACTCTCCTCCTCA 58.908 61.111 0.00 0.00 32.90 3.86
228 230 1.470996 GGGTCCCTTGCAATGCACAA 61.471 55.000 7.72 0.00 38.71 3.33
229 231 1.907807 GGGTCCCTTGCAATGCACA 60.908 57.895 7.72 0.00 38.71 4.57
231 233 1.607178 CTGGGTCCCTTGCAATGCA 60.607 57.895 2.72 2.72 36.47 3.96
235 237 3.589542 CCCCTGGGTCCCTTGCAA 61.590 66.667 12.71 0.00 0.00 4.08
246 248 0.261696 CCCCCTTTTGTATCCCCTGG 59.738 60.000 0.00 0.00 0.00 4.45
262 264 4.023291 TCATGCTTCTTTATGTTTCCCCC 58.977 43.478 0.00 0.00 0.00 5.40
263 265 5.595952 AGATCATGCTTCTTTATGTTTCCCC 59.404 40.000 0.00 0.00 0.00 4.81
264 266 6.319658 TGAGATCATGCTTCTTTATGTTTCCC 59.680 38.462 0.00 0.00 0.00 3.97
265 267 7.192232 GTGAGATCATGCTTCTTTATGTTTCC 58.808 38.462 0.00 0.00 0.00 3.13
266 268 6.904011 CGTGAGATCATGCTTCTTTATGTTTC 59.096 38.462 0.00 0.00 0.00 2.78
269 271 5.980698 CGTGAGATCATGCTTCTTTATGT 57.019 39.130 0.00 0.00 0.00 2.29
280 282 4.208666 CACTCATTAGTGCGTGAGATCATG 59.791 45.833 2.40 0.00 46.28 3.07
281 283 4.366586 CACTCATTAGTGCGTGAGATCAT 58.633 43.478 2.40 0.00 46.28 2.45
282 284 3.774066 CACTCATTAGTGCGTGAGATCA 58.226 45.455 2.40 0.00 46.28 2.92
296 298 1.973281 CACGCAAGGCCCACTCATT 60.973 57.895 0.00 0.00 46.39 2.57
304 306 1.237285 ATTCACTGACACGCAAGGCC 61.237 55.000 0.00 0.00 46.39 5.19
308 310 3.625313 TCTCAAAATTCACTGACACGCAA 59.375 39.130 0.00 0.00 0.00 4.85
310 312 3.878086 TCTCAAAATTCACTGACACGC 57.122 42.857 0.00 0.00 0.00 5.34
323 325 3.144506 CTCCTGCTCTTGCTTCTCAAAA 58.855 45.455 0.00 0.00 40.48 2.44
340 342 2.069165 AAACTTTGCCCCGAGCTCCT 62.069 55.000 8.47 0.00 44.23 3.69
341 343 1.603739 AAACTTTGCCCCGAGCTCC 60.604 57.895 8.47 0.00 44.23 4.70
347 349 2.275380 CCCCTCAAACTTTGCCCCG 61.275 63.158 0.00 0.00 0.00 5.73
352 355 0.178964 TCCTGGCCCCTCAAACTTTG 60.179 55.000 0.00 0.00 0.00 2.77
369 372 7.281774 GCTTTTAAGGGGTACACTAATACTTCC 59.718 40.741 0.00 0.00 0.00 3.46
380 383 7.454553 TCTATAATGGCTTTTAAGGGGTACA 57.545 36.000 0.00 0.00 0.00 2.90
383 386 6.782494 CCAATCTATAATGGCTTTTAAGGGGT 59.218 38.462 0.00 0.00 0.00 4.95
400 403 7.362574 CGAAAATGTTACACCAACCCAATCTAT 60.363 37.037 0.00 0.00 36.20 1.98
404 407 4.342665 ACGAAAATGTTACACCAACCCAAT 59.657 37.500 0.00 0.00 36.20 3.16
464 467 5.930209 AAGCTATATGGAAAATCCTGGGA 57.070 39.130 0.00 0.00 37.46 4.37
465 468 6.983906 AAAAGCTATATGGAAAATCCTGGG 57.016 37.500 0.00 0.00 37.46 4.45
488 491 9.898152 AAAAATTGAAACACCCTGATTCTAAAA 57.102 25.926 0.00 0.00 31.46 1.52
523 526 6.774170 ACTGCTATATGAAAATTCCTGATGCA 59.226 34.615 0.00 0.00 0.00 3.96
567 598 5.330233 TCGCCCATATTGGAGTAGATTCTA 58.670 41.667 0.00 0.00 40.96 2.10
576 607 2.549064 TGTGATCGCCCATATTGGAG 57.451 50.000 3.31 0.00 40.96 3.86
577 608 3.507162 AATGTGATCGCCCATATTGGA 57.493 42.857 3.31 0.00 40.96 3.53
578 609 3.440173 GGTAATGTGATCGCCCATATTGG 59.560 47.826 3.31 0.00 37.25 3.16
579 610 3.440173 GGGTAATGTGATCGCCCATATTG 59.560 47.826 3.31 0.00 39.13 1.90
581 612 2.642311 TGGGTAATGTGATCGCCCATAT 59.358 45.455 3.31 0.00 43.75 1.78
598 639 1.606313 CCGGTCTTTTGGCATGGGT 60.606 57.895 0.00 0.00 0.00 4.51
612 653 3.944945 GTTGGGGAACGGACCGGT 61.945 66.667 20.00 12.95 0.00 5.28
615 656 2.357881 GTCGTTGGGGAACGGACC 60.358 66.667 7.42 0.00 45.45 4.46
645 686 2.659428 GGGAGTTGAATGGAATGGAGG 58.341 52.381 0.00 0.00 0.00 4.30
647 688 1.633432 ACGGGAGTTGAATGGAATGGA 59.367 47.619 0.00 0.00 43.33 3.41
690 735 3.917760 GATCGGCGAGGGTGGAGG 61.918 72.222 17.22 0.00 0.00 4.30
701 746 3.140814 GCTTTGGGTGGGATCGGC 61.141 66.667 0.00 0.00 0.00 5.54
746 794 4.077184 GATGACGTGTGGGCCCGA 62.077 66.667 19.37 2.45 0.00 5.14
964 2522 4.593864 GGAGATGGACGCCGGAGC 62.594 72.222 5.05 0.00 0.00 4.70
1170 2733 0.247736 AGTCGCTCTTGATGGACCAC 59.752 55.000 0.00 0.00 0.00 4.16
1343 2921 0.320247 AATCAGATCGCAGCGGATCC 60.320 55.000 16.42 0.00 43.07 3.36
1351 2930 2.166459 AGACGAAAGGAATCAGATCGCA 59.834 45.455 0.00 0.00 37.03 5.10
1360 2939 4.697352 CCAAATCACAGAGACGAAAGGAAT 59.303 41.667 0.00 0.00 0.00 3.01
1366 2945 1.003118 CCCCCAAATCACAGAGACGAA 59.997 52.381 0.00 0.00 0.00 3.85
1367 2946 0.613260 CCCCCAAATCACAGAGACGA 59.387 55.000 0.00 0.00 0.00 4.20
1373 2956 0.698238 TGGACTCCCCCAAATCACAG 59.302 55.000 0.00 0.00 32.31 3.66
1461 3044 0.179116 CGATCCACTCAGCAGACAGG 60.179 60.000 0.00 0.00 0.00 4.00
1490 3073 2.663879 GCTGCTCAAGATCAACAACACG 60.664 50.000 0.00 0.00 0.00 4.49
1491 3074 2.551459 AGCTGCTCAAGATCAACAACAC 59.449 45.455 0.00 0.00 0.00 3.32
1634 3223 8.819643 AGTTCAGTAAAAGCAGTAAGTAGAAG 57.180 34.615 0.00 0.00 0.00 2.85
1694 3335 1.086696 ATCCGGTCGTGCAGAAAATG 58.913 50.000 0.00 0.00 0.00 2.32
1701 3342 0.321210 ATTCAACATCCGGTCGTGCA 60.321 50.000 0.00 0.00 0.00 4.57
1705 3346 6.838198 TTATTAAGATTCAACATCCGGTCG 57.162 37.500 0.00 0.00 0.00 4.79
1734 3375 5.688807 AGCTACAACCTAAATGCTCATGAT 58.311 37.500 0.00 0.00 0.00 2.45
1765 3407 5.163343 GCTCCTTACTGGTATTGTCATGGTA 60.163 44.000 0.00 0.00 37.07 3.25
1767 3409 4.130118 GCTCCTTACTGGTATTGTCATGG 58.870 47.826 0.00 0.00 37.07 3.66
1772 3414 4.634012 TTGTGCTCCTTACTGGTATTGT 57.366 40.909 0.00 0.00 37.07 2.71
1776 3418 4.564821 GGTTGATTGTGCTCCTTACTGGTA 60.565 45.833 0.00 0.00 37.07 3.25
1804 3446 8.853126 TCATGATCCCATCAATTAAGATTCAAC 58.147 33.333 0.00 0.00 43.50 3.18
1831 3473 3.118112 CCTTACTGCTCTTCCCATGATGT 60.118 47.826 0.00 0.00 0.00 3.06
1840 3506 0.108615 TGCGCTCCTTACTGCTCTTC 60.109 55.000 9.73 0.00 0.00 2.87
1851 3517 0.905357 AGTACCTTGATTGCGCTCCT 59.095 50.000 9.73 0.00 0.00 3.69
1879 3545 9.983431 GTCACGTTTGTTTTACATTTATTAAGC 57.017 29.630 0.00 0.00 0.00 3.09
1891 3557 2.376956 GCATGCGTCACGTTTGTTTTA 58.623 42.857 0.00 0.00 0.00 1.52
1930 3597 9.151471 CTCCGATTCTAAAATACTTTTCTCACA 57.849 33.333 0.00 0.00 34.19 3.58
1934 3601 8.561738 TTGCTCCGATTCTAAAATACTTTTCT 57.438 30.769 0.00 0.00 34.19 2.52
1940 3607 7.715265 TCTCATTGCTCCGATTCTAAAATAC 57.285 36.000 0.00 0.00 0.00 1.89
2004 3671 4.385199 CCATCTTATACCAGCCAAACTCCA 60.385 45.833 0.00 0.00 0.00 3.86
2024 3691 0.955428 CAACAGGCAGCGTACACCAT 60.955 55.000 0.00 0.00 0.00 3.55
2058 3725 4.946784 AAAGGATAACACGATCAGTTGC 57.053 40.909 10.00 3.56 0.00 4.17
2132 3800 2.060050 TTTTCCCACGAGAAGGCAAA 57.940 45.000 0.00 0.00 0.00 3.68
2159 3828 3.149005 TCAGACCCCGTTGCTTTATTT 57.851 42.857 0.00 0.00 0.00 1.40
2162 3831 3.452990 TGATATCAGACCCCGTTGCTTTA 59.547 43.478 0.00 0.00 0.00 1.85
2170 3839 2.620251 TTTGCTGATATCAGACCCCG 57.380 50.000 32.38 9.69 46.59 5.73
2213 4349 6.316140 CACAAGCTTATATCAGCCAAACTACA 59.684 38.462 0.00 0.00 41.12 2.74
2229 4365 0.320946 GGGCGGTGTACACAAGCTTA 60.321 55.000 30.94 0.00 36.94 3.09
2281 4417 3.214328 GAACAGGCAGAGAAAAAGGACA 58.786 45.455 0.00 0.00 0.00 4.02
2295 4431 1.748493 TGTCCAAAACAGTGAACAGGC 59.252 47.619 0.00 0.00 32.81 4.85
2349 4485 8.904834 TCAAGTAAGTGATACTCTACAGAATCC 58.095 37.037 0.00 0.00 44.22 3.01
2363 4499 8.370940 TCACTCTGAAATCTTCAAGTAAGTGAT 58.629 33.333 13.74 0.00 38.57 3.06
2366 4502 8.964476 TTTCACTCTGAAATCTTCAAGTAAGT 57.036 30.769 0.00 0.00 41.02 2.24
2497 4633 4.422057 TCCCAGTTCCTATGTCAAGTACA 58.578 43.478 0.00 0.00 43.86 2.90
2515 4651 1.001764 TAAGAGTCGTCCGCTCCCA 60.002 57.895 7.26 0.00 33.69 4.37
2582 4718 5.941555 TTGGGAAATGTAAACCAACAAGT 57.058 34.783 0.00 0.00 38.02 3.16
2594 4730 5.533154 TGTCAAGATTACGTTTGGGAAATGT 59.467 36.000 0.00 0.00 42.83 2.71
2643 4779 2.555199 AGCAATTCATCGCCAGAGTAC 58.445 47.619 0.00 0.00 0.00 2.73
2741 4877 4.706962 AGAGCCATTTTGTGTAATCTTCCC 59.293 41.667 0.00 0.00 0.00 3.97
2815 4951 5.473162 CCATCTAATCCATAAAATGCCGTGA 59.527 40.000 0.00 0.00 0.00 4.35
3059 5197 7.041780 CCTCAAAGCATAAAAGCAGTATCGTAT 60.042 37.037 0.00 0.00 36.85 3.06
3060 5198 6.257849 CCTCAAAGCATAAAAGCAGTATCGTA 59.742 38.462 0.00 0.00 36.85 3.43
3061 5199 5.065218 CCTCAAAGCATAAAAGCAGTATCGT 59.935 40.000 0.00 0.00 36.85 3.73
3062 5200 5.294306 TCCTCAAAGCATAAAAGCAGTATCG 59.706 40.000 0.00 0.00 36.85 2.92
3063 5201 6.683974 TCCTCAAAGCATAAAAGCAGTATC 57.316 37.500 0.00 0.00 36.85 2.24
3064 5202 6.886459 TCTTCCTCAAAGCATAAAAGCAGTAT 59.114 34.615 0.00 0.00 36.85 2.12
3065 5203 6.237901 TCTTCCTCAAAGCATAAAAGCAGTA 58.762 36.000 0.00 0.00 36.85 2.74
3066 5204 5.072741 TCTTCCTCAAAGCATAAAAGCAGT 58.927 37.500 0.00 0.00 36.85 4.40
3067 5205 5.633830 TCTTCCTCAAAGCATAAAAGCAG 57.366 39.130 0.00 0.00 36.85 4.24
3068 5206 6.594788 AATCTTCCTCAAAGCATAAAAGCA 57.405 33.333 0.00 0.00 36.85 3.91
3069 5207 7.168804 GCATAATCTTCCTCAAAGCATAAAAGC 59.831 37.037 0.00 0.00 34.76 3.51
3070 5208 8.411683 AGCATAATCTTCCTCAAAGCATAAAAG 58.588 33.333 0.00 0.00 34.76 2.27
3071 5209 8.192774 CAGCATAATCTTCCTCAAAGCATAAAA 58.807 33.333 0.00 0.00 34.76 1.52
3072 5210 7.201848 CCAGCATAATCTTCCTCAAAGCATAAA 60.202 37.037 0.00 0.00 34.76 1.40
3073 5211 6.263842 CCAGCATAATCTTCCTCAAAGCATAA 59.736 38.462 0.00 0.00 34.76 1.90
3074 5212 5.766670 CCAGCATAATCTTCCTCAAAGCATA 59.233 40.000 0.00 0.00 34.76 3.14
3075 5213 4.583489 CCAGCATAATCTTCCTCAAAGCAT 59.417 41.667 0.00 0.00 34.76 3.79
3076 5214 3.949754 CCAGCATAATCTTCCTCAAAGCA 59.050 43.478 0.00 0.00 34.76 3.91
3077 5215 3.243334 GCCAGCATAATCTTCCTCAAAGC 60.243 47.826 0.00 0.00 34.76 3.51
3135 5273 4.511527 TGTACGAAAACCAACTAACACCA 58.488 39.130 0.00 0.00 0.00 4.17
3136 5274 5.678132 ATGTACGAAAACCAACTAACACC 57.322 39.130 0.00 0.00 0.00 4.16
3137 5275 8.075593 TCTTATGTACGAAAACCAACTAACAC 57.924 34.615 0.00 0.00 0.00 3.32
3145 5286 7.881232 AGGAATTTCTCTTATGTACGAAAACCA 59.119 33.333 14.18 0.00 33.05 3.67
3181 5322 6.006275 AGGTGTTAATAATGAGACAGGCAT 57.994 37.500 0.00 0.00 0.00 4.40
3182 5323 5.189736 AGAGGTGTTAATAATGAGACAGGCA 59.810 40.000 0.00 0.00 0.00 4.75
3299 5440 3.427909 GCTCAAATCCATCACGAATTGCA 60.428 43.478 0.00 0.00 0.00 4.08
3424 5566 3.244770 ACGGGGACACTATGTTCAACATT 60.245 43.478 8.69 0.00 39.88 2.71
3448 5590 7.660030 AAGGGTTCTTTCTTCATCTTTCAAA 57.340 32.000 0.00 0.00 0.00 2.69
3475 5617 9.770097 TGCAAACATAAAAAGGTTCATAAATCA 57.230 25.926 0.00 0.00 0.00 2.57
3523 5665 5.555966 AGTTCAAATCTCCTCTCCAACTTC 58.444 41.667 0.00 0.00 0.00 3.01
3562 5704 1.419387 AGCCCTATTGCATCCAGAGTC 59.581 52.381 0.00 0.00 0.00 3.36
3661 5803 8.726988 GTTAAACCACAGCTATGAAGATTTACA 58.273 33.333 0.00 0.00 0.00 2.41
3662 5804 8.726988 TGTTAAACCACAGCTATGAAGATTTAC 58.273 33.333 0.00 0.00 0.00 2.01
3763 5905 7.859377 CCAATACATCATTCTGAAATGCAGTAC 59.141 37.037 0.00 0.00 45.14 2.73
3841 5983 7.967854 TGTGAATATACTGCTAACAAATGCAAC 59.032 33.333 0.00 0.00 38.81 4.17
3901 6043 6.548622 ACATCAGAGGGTAATCCATTGATTTG 59.451 38.462 0.00 0.00 41.44 2.32
3916 6058 1.278985 TGCACAGGTAACATCAGAGGG 59.721 52.381 0.00 0.00 41.41 4.30
4080 6222 0.515564 CGTTTGGGTAAGCTTGGACG 59.484 55.000 9.86 6.47 0.00 4.79
4108 6250 1.212490 CAACGGTGGCGATGCAAAT 59.788 52.632 0.00 0.00 0.00 2.32
4300 6451 5.524646 AGCTTTAAAACAGTACAGTAACGCA 59.475 36.000 0.00 0.00 0.00 5.24
4450 6617 1.958288 ACAGGCCTGTATCTGAACCT 58.042 50.000 37.12 8.11 42.90 3.50
4453 6620 4.473196 TGGAATTACAGGCCTGTATCTGAA 59.527 41.667 39.32 28.71 44.54 3.02
4524 6691 6.093404 CGATGTAACTTGTGAGCTTCTCTAA 58.907 40.000 0.00 0.00 0.00 2.10
4586 6753 4.910195 TGTGTGCACAAGAAATAGGAGAT 58.090 39.130 23.59 0.00 38.56 2.75
4590 6757 4.614535 GCTTCTGTGTGCACAAGAAATAGG 60.615 45.833 28.33 21.99 41.33 2.57
4669 6836 3.181495 CGGTGTGGTTAACAGAAGCAAAA 60.181 43.478 8.10 0.00 40.26 2.44
4699 6866 3.695830 ACTGACACCATACAAATCGGT 57.304 42.857 0.00 0.00 0.00 4.69
4704 6871 3.056393 CCCGTCTACTGACACCATACAAA 60.056 47.826 0.00 0.00 43.06 2.83
4785 6952 1.367599 GAGGACGATGACGACGAGGT 61.368 60.000 0.00 0.00 42.66 3.85
4790 6957 1.002251 GAGGATGAGGACGATGACGAC 60.002 57.143 0.00 0.00 42.66 4.34
4793 6960 0.312416 CCGAGGATGAGGACGATGAC 59.688 60.000 0.00 0.00 0.00 3.06
4796 6963 0.395862 ACACCGAGGATGAGGACGAT 60.396 55.000 0.00 0.00 0.00 3.73
4860 7027 3.822940 CGTAACTCTGGGGTCTAGATCT 58.177 50.000 2.34 0.00 0.00 2.75
5005 7180 1.338674 CGCCAACAGGTAACCTCATCA 60.339 52.381 0.00 0.00 37.17 3.07
5010 7185 1.005394 CGTCGCCAACAGGTAACCT 60.005 57.895 0.00 0.00 37.17 3.50
5012 7187 1.611592 CGTCGTCGCCAACAGGTAAC 61.612 60.000 0.00 0.00 0.00 2.50
5074 7249 1.280421 AGGACAGCTGGGATTCTGTTC 59.720 52.381 19.93 2.47 42.97 3.18
5089 7264 0.761187 AGCTTCTTGTGCTGAGGACA 59.239 50.000 1.58 1.58 39.56 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.