Multiple sequence alignment - TraesCS3A01G025200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G025200 chr3A 100.000 4069 0 0 1 4069 13408246 13404178 0.000000e+00 7515.0
1 TraesCS3A01G025200 chr3A 77.778 684 129 18 2392 3068 14766030 14766697 2.280000e-107 399.0
2 TraesCS3A01G025200 chr3A 80.447 358 46 14 1835 2179 14765445 14765791 6.750000e-63 252.0
3 TraesCS3A01G025200 chr3A 89.535 86 7 2 1663 1748 715719428 715719511 1.550000e-19 108.0
4 TraesCS3A01G025200 chr3D 92.614 1029 64 6 2191 3207 6976304 6977332 0.000000e+00 1469.0
5 TraesCS3A01G025200 chr3D 91.866 836 49 10 1 822 6974028 6974858 0.000000e+00 1149.0
6 TraesCS3A01G025200 chr3D 87.355 949 69 21 824 1752 6974901 6975818 0.000000e+00 1040.0
7 TraesCS3A01G025200 chr3D 76.627 830 147 28 2245 3068 6168265 6167477 8.140000e-112 414.0
8 TraesCS3A01G025200 chr3D 76.375 800 144 32 2302 3080 6141880 6142655 4.930000e-104 388.0
9 TraesCS3A01G025200 chr3D 91.429 175 14 1 3872 4045 462246305 462246479 5.260000e-59 239.0
10 TraesCS3A01G025200 chr3D 78.056 360 52 18 1838 2184 6168725 6168380 6.900000e-48 202.0
11 TraesCS3A01G025200 chr3D 92.500 120 5 1 3269 3388 6977332 6977447 6.990000e-38 169.0
12 TraesCS3A01G025200 chr3B 92.897 718 45 1 2264 2975 8494168 8494885 0.000000e+00 1038.0
13 TraesCS3A01G025200 chr3B 83.802 747 53 26 674 1381 8492747 8493464 0.000000e+00 647.0
14 TraesCS3A01G025200 chr3B 89.035 456 39 8 1299 1748 8493487 8493937 4.600000e-154 555.0
15 TraesCS3A01G025200 chr3B 89.498 438 28 7 2968 3388 8495453 8495889 4.630000e-149 538.0
16 TraesCS3A01G025200 chr3B 76.306 785 140 30 2294 3068 681569358 681568610 1.070000e-100 377.0
17 TraesCS3A01G025200 chr3B 84.960 379 27 15 23 383 8490817 8491183 1.390000e-94 357.0
18 TraesCS3A01G025200 chr3B 79.154 331 47 13 1838 2157 681569693 681569374 4.120000e-50 209.0
19 TraesCS3A01G025200 chr3B 91.860 86 6 1 3492 3577 8501381 8501465 7.140000e-23 119.0
20 TraesCS3A01G025200 chr3B 96.226 53 1 1 3820 3872 8498014 8498065 7.250000e-13 86.1
21 TraesCS3A01G025200 chr3B 89.394 66 5 1 3516 3581 8496390 8496453 9.370000e-12 82.4
22 TraesCS3A01G025200 chr1B 93.182 176 11 1 3871 4045 620129453 620129628 1.450000e-64 257.0
23 TraesCS3A01G025200 chr7B 92.614 176 12 1 3871 4045 662651734 662651559 6.750000e-63 252.0
24 TraesCS3A01G025200 chr5B 92.045 176 13 1 3871 4045 63850552 63850727 3.140000e-61 246.0
25 TraesCS3A01G025200 chr5B 92.045 176 13 1 3871 4045 72258368 72258543 3.140000e-61 246.0
26 TraesCS3A01G025200 chr5B 92.045 176 13 1 3871 4045 72821295 72821120 3.140000e-61 246.0
27 TraesCS3A01G025200 chr5D 91.477 176 14 1 3871 4045 58685837 58686012 1.460000e-59 241.0
28 TraesCS3A01G025200 chr1D 91.477 176 14 1 3871 4045 451625546 451625371 1.460000e-59 241.0
29 TraesCS3A01G025200 chr1A 91.477 176 14 1 3871 4045 546216851 546216676 1.460000e-59 241.0
30 TraesCS3A01G025200 chr1A 88.372 86 8 2 1663 1748 102762130 102762213 7.200000e-18 102.0
31 TraesCS3A01G025200 chr7A 90.698 86 6 2 1663 1748 24783838 24783755 3.320000e-21 113.0
32 TraesCS3A01G025200 chr6D 89.535 86 7 2 1663 1748 53540297 53540214 1.550000e-19 108.0
33 TraesCS3A01G025200 chr4A 89.535 86 7 2 1663 1748 33007101 33007184 1.550000e-19 108.0
34 TraesCS3A01G025200 chr5A 92.105 76 4 2 1673 1748 639276493 639276420 5.560000e-19 106.0
35 TraesCS3A01G025200 chr2B 89.157 83 5 4 1663 1744 719483460 719483539 2.590000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G025200 chr3A 13404178 13408246 4068 True 7515.0000 7515 100.00000 1 4069 1 chr3A.!!$R1 4068
1 TraesCS3A01G025200 chr3A 14765445 14766697 1252 False 325.5000 399 79.11250 1835 3068 2 chr3A.!!$F2 1233
2 TraesCS3A01G025200 chr3D 6974028 6977447 3419 False 956.7500 1469 91.08375 1 3388 4 chr3D.!!$F3 3387
3 TraesCS3A01G025200 chr3D 6141880 6142655 775 False 388.0000 388 76.37500 2302 3080 1 chr3D.!!$F1 778
4 TraesCS3A01G025200 chr3D 6167477 6168725 1248 True 308.0000 414 77.34150 1838 3068 2 chr3D.!!$R1 1230
5 TraesCS3A01G025200 chr3B 8490817 8501465 10648 False 427.8125 1038 89.70900 23 3872 8 chr3B.!!$F1 3849
6 TraesCS3A01G025200 chr3B 681568610 681569693 1083 True 293.0000 377 77.73000 1838 3068 2 chr3B.!!$R1 1230

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
317 336 0.392327 CATGACCATACCGGCACACA 60.392 55.0 0.0 0.0 39.03 3.72 F
1304 2855 0.379669 CGAGAATGCTGGTTGCCATC 59.620 55.0 0.0 0.0 42.00 3.51 F
1305 2856 0.743097 GAGAATGCTGGTTGCCATCC 59.257 55.0 0.0 0.0 42.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2067 3640 0.034767 TGCAGATTGCTCTGGAAGGG 60.035 55.0 5.23 0.00 45.62 3.95 R
2705 4436 0.036388 CGTATGGGACCAAGCAGTGT 60.036 55.0 0.00 0.00 0.00 3.55 R
3251 5577 0.320858 TGTGCTTGGCCATGCAAATG 60.321 50.0 38.95 11.89 42.03 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 1.421268 TGTTCCTGCACCAGTGAGAAT 59.579 47.619 0.99 0.00 0.00 2.40
80 81 3.181493 CCTGCACCAGTGAGAATATTTGC 60.181 47.826 0.99 0.00 0.00 3.68
113 121 0.604780 ACACAGTCCAGCATCAGCAC 60.605 55.000 0.00 0.00 45.49 4.40
120 128 4.377708 AGCATCAGCACGACGCCA 62.378 61.111 0.00 0.00 45.49 5.69
150 165 1.081840 GTTGCTCAACCGAAGCAGC 60.082 57.895 1.45 0.00 39.85 5.25
181 196 0.839277 ATCGCCCAGGATGATGACAA 59.161 50.000 0.00 0.00 39.69 3.18
190 205 2.779430 AGGATGATGACAACCTATGCCA 59.221 45.455 0.00 0.00 45.34 4.92
271 287 3.864789 GGAGAAATGAGGGCTCCATTA 57.135 47.619 0.00 0.00 45.89 1.90
277 293 8.938883 GGAGAAATGAGGGCTCCATTATATATA 58.061 37.037 0.00 0.00 45.89 0.86
317 336 0.392327 CATGACCATACCGGCACACA 60.392 55.000 0.00 0.00 39.03 3.72
333 352 5.220472 CGGCACACAACATAACTCTCATTAG 60.220 44.000 0.00 0.00 0.00 1.73
383 402 8.475639 ACACGTATCAGAACAAGGAATAGTTAT 58.524 33.333 0.00 0.00 0.00 1.89
425 444 7.327214 GGGATAAGCTCCTCAAGATACTATTG 58.673 42.308 0.00 0.00 44.28 1.90
439 458 7.502120 AGATACTATTGAATTGGACATGTGC 57.498 36.000 10.90 10.90 0.00 4.57
446 465 3.640498 TGAATTGGACATGTGCTTTTCCA 59.360 39.130 18.75 8.23 36.31 3.53
523 1886 6.333416 GGGCTCCTTTGACTTAAATGATTTC 58.667 40.000 0.00 0.00 0.00 2.17
728 2103 0.602562 TTTGCTTTTCCTGCGATGGG 59.397 50.000 0.00 0.00 0.00 4.00
731 2106 0.393808 GCTTTTCCTGCGATGGGGTA 60.394 55.000 0.00 0.00 0.00 3.69
740 2115 1.267261 TGCGATGGGGTAAAACAAACG 59.733 47.619 0.00 0.00 0.00 3.60
742 2117 2.413634 GCGATGGGGTAAAACAAACGAG 60.414 50.000 0.00 0.00 0.00 4.18
746 2121 5.335348 CGATGGGGTAAAACAAACGAGAATT 60.335 40.000 0.00 0.00 0.00 2.17
757 2132 9.626045 AAAACAAACGAGAATTTCATAGGATTC 57.374 29.630 0.00 0.00 33.49 2.52
905 2331 6.302269 AGAAGACTGTTCATTCTCCATTTGT 58.698 36.000 0.00 0.00 0.00 2.83
948 2374 0.915364 GAGCTGGATTTGGGAGGACT 59.085 55.000 0.00 0.00 0.00 3.85
989 2415 1.353358 GAGCATCCATCCATCCATCCA 59.647 52.381 0.00 0.00 0.00 3.41
990 2416 2.000803 AGCATCCATCCATCCATCCAT 58.999 47.619 0.00 0.00 0.00 3.41
991 2417 2.025226 AGCATCCATCCATCCATCCATC 60.025 50.000 0.00 0.00 0.00 3.51
992 2418 2.949054 GCATCCATCCATCCATCCATCC 60.949 54.545 0.00 0.00 0.00 3.51
993 2419 2.136974 TCCATCCATCCATCCATCCA 57.863 50.000 0.00 0.00 0.00 3.41
994 2420 2.651190 TCCATCCATCCATCCATCCAT 58.349 47.619 0.00 0.00 0.00 3.41
995 2421 2.579400 TCCATCCATCCATCCATCCATC 59.421 50.000 0.00 0.00 0.00 3.51
996 2422 2.357881 CCATCCATCCATCCATCCATCC 60.358 54.545 0.00 0.00 0.00 3.51
1022 2449 1.750399 CCAAGGTGAATGCCTCCCG 60.750 63.158 0.00 0.00 38.03 5.14
1050 2491 2.500098 TCTCCCCGTCCAGTTTATCTTG 59.500 50.000 0.00 0.00 0.00 3.02
1106 2547 1.663379 GAATGGGGTTGCCCGCTTAC 61.663 60.000 0.00 0.00 46.66 2.34
1117 2558 3.849953 CGCTTACGAGGGTTGCGC 61.850 66.667 0.00 0.00 43.93 6.09
1118 2559 3.849953 GCTTACGAGGGTTGCGCG 61.850 66.667 0.00 0.00 0.00 6.86
1119 2560 3.849953 CTTACGAGGGTTGCGCGC 61.850 66.667 27.26 27.26 0.00 6.86
1304 2855 0.379669 CGAGAATGCTGGTTGCCATC 59.620 55.000 0.00 0.00 42.00 3.51
1305 2856 0.743097 GAGAATGCTGGTTGCCATCC 59.257 55.000 0.00 0.00 42.00 3.51
1320 2871 3.203710 TGCCATCCTCTGATCCAAGATTT 59.796 43.478 0.00 0.00 0.00 2.17
1350 2906 8.043710 TGGTTTTCTAATTCAACATTTTGGTGT 58.956 29.630 0.00 0.00 36.24 4.16
1375 2931 6.590292 TCCTGTATCAAGTTTTCGATCTGAAC 59.410 38.462 0.00 0.00 35.97 3.18
1376 2932 6.591834 CCTGTATCAAGTTTTCGATCTGAACT 59.408 38.462 0.00 0.00 35.97 3.01
1377 2933 7.118390 CCTGTATCAAGTTTTCGATCTGAACTT 59.882 37.037 10.39 10.39 42.55 2.66
1380 2936 6.530913 TCAAGTTTTCGATCTGAACTTCTG 57.469 37.500 12.29 6.56 40.54 3.02
1408 2964 1.762370 TGACAGATCGGCCATACATGT 59.238 47.619 2.24 2.69 0.00 3.21
1410 2966 3.386402 TGACAGATCGGCCATACATGTTA 59.614 43.478 2.30 0.00 0.00 2.41
1413 2970 5.376625 ACAGATCGGCCATACATGTTATTT 58.623 37.500 2.30 0.00 0.00 1.40
1414 2971 6.530120 ACAGATCGGCCATACATGTTATTTA 58.470 36.000 2.30 0.00 0.00 1.40
1421 2978 6.438763 GGCCATACATGTTATTTAGCTTCAC 58.561 40.000 2.30 0.00 0.00 3.18
1445 3002 5.156608 TCACTGTCATATATGGCCATCTG 57.843 43.478 24.80 18.04 0.00 2.90
1459 3016 3.134458 GCCATCTGTATTACTGGTCAGC 58.866 50.000 0.00 0.00 0.00 4.26
1467 3024 5.373222 TGTATTACTGGTCAGCAACTTTGT 58.627 37.500 0.00 0.00 0.00 2.83
1649 3206 2.043652 CCATTGGCTCCACCCCTG 60.044 66.667 0.00 0.00 37.83 4.45
1671 3228 4.595781 TGTTCCAGGTACATAACAGAACCT 59.404 41.667 0.00 0.00 43.15 3.50
1678 3235 6.590292 CAGGTACATAACAGAACCTTGTAGTG 59.410 42.308 0.00 0.00 40.39 2.74
1679 3236 6.269307 AGGTACATAACAGAACCTTGTAGTGT 59.731 38.462 0.00 0.00 39.32 3.55
1680 3237 6.367969 GGTACATAACAGAACCTTGTAGTGTG 59.632 42.308 0.00 0.00 33.57 3.82
1681 3238 6.169557 ACATAACAGAACCTTGTAGTGTGA 57.830 37.500 0.00 0.00 31.63 3.58
1682 3239 6.769512 ACATAACAGAACCTTGTAGTGTGAT 58.230 36.000 0.00 0.00 31.63 3.06
1684 3241 4.955811 ACAGAACCTTGTAGTGTGATGA 57.044 40.909 0.00 0.00 0.00 2.92
1697 3254 6.895756 TGTAGTGTGATGAACTAGTATTCCCT 59.104 38.462 0.00 0.00 30.90 4.20
1711 3268 6.029346 AGTATTCCCTTTGTCAAATGCTTG 57.971 37.500 0.00 0.00 0.00 4.01
1748 3305 9.778741 CTAGATTCAGTTATACCCTGCAATTTA 57.221 33.333 0.00 0.00 0.00 1.40
1749 3306 8.682936 AGATTCAGTTATACCCTGCAATTTAG 57.317 34.615 0.00 0.00 0.00 1.85
1752 3309 7.859325 TCAGTTATACCCTGCAATTTAGTTC 57.141 36.000 0.00 0.00 0.00 3.01
1754 3311 7.552687 TCAGTTATACCCTGCAATTTAGTTCTG 59.447 37.037 0.00 0.00 0.00 3.02
1755 3312 7.336931 CAGTTATACCCTGCAATTTAGTTCTGT 59.663 37.037 0.00 0.00 0.00 3.41
1756 3313 7.336931 AGTTATACCCTGCAATTTAGTTCTGTG 59.663 37.037 0.00 0.00 0.00 3.66
1757 3314 3.832527 ACCCTGCAATTTAGTTCTGTGT 58.167 40.909 0.00 0.00 0.00 3.72
1758 3315 4.215109 ACCCTGCAATTTAGTTCTGTGTT 58.785 39.130 0.00 0.00 0.00 3.32
1760 3317 3.983344 CCTGCAATTTAGTTCTGTGTTGC 59.017 43.478 0.00 0.00 41.53 4.17
1761 3318 4.499526 CCTGCAATTTAGTTCTGTGTTGCA 60.500 41.667 9.78 9.78 46.52 4.08
1762 3319 4.609947 TGCAATTTAGTTCTGTGTTGCAG 58.390 39.130 6.50 0.00 44.64 4.41
1765 3322 5.591099 CAATTTAGTTCTGTGTTGCAGGTT 58.409 37.500 0.00 0.00 45.08 3.50
1766 3323 6.734137 CAATTTAGTTCTGTGTTGCAGGTTA 58.266 36.000 0.00 0.00 45.08 2.85
1767 3324 7.370383 CAATTTAGTTCTGTGTTGCAGGTTAT 58.630 34.615 0.00 0.00 45.08 1.89
1768 3325 5.940192 TTAGTTCTGTGTTGCAGGTTATG 57.060 39.130 0.00 0.00 45.08 1.90
1769 3326 4.085357 AGTTCTGTGTTGCAGGTTATGA 57.915 40.909 0.00 0.00 45.08 2.15
1770 3327 4.655963 AGTTCTGTGTTGCAGGTTATGAT 58.344 39.130 0.00 0.00 45.08 2.45
1771 3328 5.072741 AGTTCTGTGTTGCAGGTTATGATT 58.927 37.500 0.00 0.00 45.08 2.57
1772 3329 5.536161 AGTTCTGTGTTGCAGGTTATGATTT 59.464 36.000 0.00 0.00 45.08 2.17
1773 3330 6.040842 AGTTCTGTGTTGCAGGTTATGATTTT 59.959 34.615 0.00 0.00 45.08 1.82
1774 3331 6.012658 TCTGTGTTGCAGGTTATGATTTTC 57.987 37.500 0.00 0.00 45.08 2.29
1779 3336 7.446931 TGTGTTGCAGGTTATGATTTTCTTAGA 59.553 33.333 0.00 0.00 0.00 2.10
1780 3337 7.750903 GTGTTGCAGGTTATGATTTTCTTAGAC 59.249 37.037 0.00 0.00 0.00 2.59
1781 3338 7.446931 TGTTGCAGGTTATGATTTTCTTAGACA 59.553 33.333 0.00 0.00 0.00 3.41
1783 3340 8.579850 TGCAGGTTATGATTTTCTTAGACATT 57.420 30.769 0.00 0.00 0.00 2.71
1784 3341 8.677300 TGCAGGTTATGATTTTCTTAGACATTC 58.323 33.333 0.00 0.00 0.00 2.67
1785 3342 8.677300 GCAGGTTATGATTTTCTTAGACATTCA 58.323 33.333 0.00 0.00 0.00 2.57
1792 3349 8.498054 TGATTTTCTTAGACATTCATCTGGTC 57.502 34.615 0.00 0.00 0.00 4.02
1793 3350 8.324306 TGATTTTCTTAGACATTCATCTGGTCT 58.676 33.333 0.00 0.00 43.76 3.85
1794 3351 7.912056 TTTTCTTAGACATTCATCTGGTCTG 57.088 36.000 0.00 0.00 41.66 3.51
1795 3352 5.604758 TCTTAGACATTCATCTGGTCTGG 57.395 43.478 0.00 0.00 41.66 3.86
1796 3353 5.272402 TCTTAGACATTCATCTGGTCTGGA 58.728 41.667 0.00 0.00 41.66 3.86
1797 3354 5.901853 TCTTAGACATTCATCTGGTCTGGAT 59.098 40.000 0.00 0.00 41.66 3.41
1798 3355 6.385176 TCTTAGACATTCATCTGGTCTGGATT 59.615 38.462 0.00 0.00 41.66 3.01
1799 3356 5.447778 AGACATTCATCTGGTCTGGATTT 57.552 39.130 0.00 0.00 40.21 2.17
1800 3357 5.435291 AGACATTCATCTGGTCTGGATTTC 58.565 41.667 0.00 0.00 40.21 2.17
1801 3358 5.045359 AGACATTCATCTGGTCTGGATTTCA 60.045 40.000 0.00 0.00 40.21 2.69
1802 3359 4.946157 ACATTCATCTGGTCTGGATTTCAC 59.054 41.667 0.00 0.00 0.00 3.18
1803 3360 3.634397 TCATCTGGTCTGGATTTCACC 57.366 47.619 0.00 0.00 0.00 4.02
1804 3361 2.912295 TCATCTGGTCTGGATTTCACCA 59.088 45.455 0.00 0.00 37.89 4.17
1805 3362 3.330405 TCATCTGGTCTGGATTTCACCAA 59.670 43.478 0.00 0.00 39.75 3.67
1806 3363 3.423539 TCTGGTCTGGATTTCACCAAG 57.576 47.619 0.00 0.00 39.75 3.61
1807 3364 2.711009 TCTGGTCTGGATTTCACCAAGT 59.289 45.455 0.00 0.00 39.75 3.16
1808 3365 3.907474 TCTGGTCTGGATTTCACCAAGTA 59.093 43.478 0.00 0.00 39.75 2.24
1809 3366 4.536090 TCTGGTCTGGATTTCACCAAGTAT 59.464 41.667 0.00 0.00 39.75 2.12
1810 3367 4.843728 TGGTCTGGATTTCACCAAGTATC 58.156 43.478 0.00 0.00 37.25 2.24
1811 3368 3.871594 GGTCTGGATTTCACCAAGTATCG 59.128 47.826 0.00 0.00 39.59 2.92
1812 3369 3.309954 GTCTGGATTTCACCAAGTATCGC 59.690 47.826 0.00 0.00 39.59 4.58
1813 3370 2.614057 CTGGATTTCACCAAGTATCGCC 59.386 50.000 0.00 0.00 39.59 5.54
1814 3371 2.026729 TGGATTTCACCAAGTATCGCCA 60.027 45.455 0.00 0.00 36.96 5.69
1815 3372 3.214328 GGATTTCACCAAGTATCGCCAT 58.786 45.455 0.00 0.00 0.00 4.40
1816 3373 3.632145 GGATTTCACCAAGTATCGCCATT 59.368 43.478 0.00 0.00 0.00 3.16
1817 3374 4.819630 GGATTTCACCAAGTATCGCCATTA 59.180 41.667 0.00 0.00 0.00 1.90
1824 3381 4.272504 ACCAAGTATCGCCATTAATTGACG 59.727 41.667 0.00 0.00 28.69 4.35
1825 3382 4.272504 CCAAGTATCGCCATTAATTGACGT 59.727 41.667 0.00 0.00 28.69 4.34
1827 3384 6.255215 CAAGTATCGCCATTAATTGACGTTT 58.745 36.000 0.00 0.00 28.69 3.60
1829 3386 7.542534 AGTATCGCCATTAATTGACGTTTTA 57.457 32.000 0.00 0.00 0.00 1.52
1831 3388 8.617809 AGTATCGCCATTAATTGACGTTTTATT 58.382 29.630 0.00 0.00 0.00 1.40
1833 3390 8.696410 ATCGCCATTAATTGACGTTTTATTTT 57.304 26.923 0.00 0.00 0.00 1.82
1912 3469 8.862325 TCAGTTATGATGTTTTGGTCAGTATT 57.138 30.769 0.00 0.00 0.00 1.89
1920 3477 2.857186 TTGGTCAGTATTGCTGCTCA 57.143 45.000 0.00 0.00 44.66 4.26
1936 3495 6.615088 TGCTGCTCATAGAATTCTGTTTTTC 58.385 36.000 18.47 3.77 0.00 2.29
1939 3501 7.484324 GCTGCTCATAGAATTCTGTTTTTCTTC 59.516 37.037 18.47 0.00 34.22 2.87
1940 3502 8.627208 TGCTCATAGAATTCTGTTTTTCTTCT 57.373 30.769 18.47 0.00 34.22 2.85
1977 3543 6.681729 AGAACTGGTTGAATGTTACTAGGA 57.318 37.500 0.00 0.00 0.00 2.94
1980 3546 8.164070 AGAACTGGTTGAATGTTACTAGGAAAT 58.836 33.333 0.00 0.00 0.00 2.17
2011 3580 6.817765 AATCAAGATGTGGACGTATTTGTT 57.182 33.333 0.00 0.00 0.00 2.83
2012 3581 5.856126 TCAAGATGTGGACGTATTTGTTC 57.144 39.130 0.00 0.00 0.00 3.18
2013 3582 5.301555 TCAAGATGTGGACGTATTTGTTCA 58.698 37.500 0.00 0.00 0.00 3.18
2014 3583 5.937540 TCAAGATGTGGACGTATTTGTTCAT 59.062 36.000 0.00 0.00 28.11 2.57
2015 3584 6.429692 TCAAGATGTGGACGTATTTGTTCATT 59.570 34.615 0.00 0.00 28.11 2.57
2031 3600 8.854979 TTTGTTCATTACAACTCATTTCAGTG 57.145 30.769 0.00 0.00 46.09 3.66
2042 3611 4.271049 ACTCATTTCAGTGTGTCTTTGACG 59.729 41.667 0.00 0.00 34.95 4.35
2043 3612 4.188462 TCATTTCAGTGTGTCTTTGACGT 58.812 39.130 0.00 0.00 34.95 4.34
2045 3614 4.593597 TTTCAGTGTGTCTTTGACGTTC 57.406 40.909 0.00 0.00 34.95 3.95
2046 3615 3.520290 TCAGTGTGTCTTTGACGTTCT 57.480 42.857 0.00 0.00 34.95 3.01
2049 3618 4.337274 TCAGTGTGTCTTTGACGTTCTCTA 59.663 41.667 0.00 0.00 34.95 2.43
2050 3619 4.677378 CAGTGTGTCTTTGACGTTCTCTAG 59.323 45.833 0.00 0.00 34.95 2.43
2051 3620 4.338682 AGTGTGTCTTTGACGTTCTCTAGT 59.661 41.667 0.00 0.00 34.95 2.57
2053 3622 4.228317 GTGTCTTTGACGTTCTCTAGTCC 58.772 47.826 0.00 0.00 36.61 3.85
2057 3626 5.984323 GTCTTTGACGTTCTCTAGTCCTTTT 59.016 40.000 0.00 0.00 36.61 2.27
2060 3629 3.006537 TGACGTTCTCTAGTCCTTTTGGG 59.993 47.826 0.00 0.00 40.87 4.12
2067 3640 6.356186 TCTCTAGTCCTTTTGGGTAAGTTC 57.644 41.667 0.00 0.00 40.87 3.01
2103 3676 7.574592 GCAATCTGCAGACATATATTTTCTCCC 60.575 40.741 20.97 0.00 44.26 4.30
2104 3677 6.499106 TCTGCAGACATATATTTTCTCCCA 57.501 37.500 13.74 0.00 0.00 4.37
2105 3678 6.528321 TCTGCAGACATATATTTTCTCCCAG 58.472 40.000 13.74 9.56 0.00 4.45
2109 3682 4.665009 AGACATATATTTTCTCCCAGGGCA 59.335 41.667 0.00 0.00 0.00 5.36
2112 3685 2.071778 TATTTTCTCCCAGGGCATGC 57.928 50.000 9.90 9.90 0.00 4.06
2125 3698 1.222387 GCATGCCAATTGCCATGGT 59.778 52.632 25.76 0.00 40.23 3.55
2131 3704 1.134907 GCCAATTGCCATGGTCAAGAG 60.135 52.381 21.00 16.36 40.23 2.85
2181 3833 7.472663 GCCTATGAAGTATCAACTCTCTGGATT 60.473 40.741 0.00 0.00 39.49 3.01
2184 3836 7.718334 TGAAGTATCAACTCTCTGGATTACA 57.282 36.000 0.00 0.00 33.75 2.41
2185 3837 8.134202 TGAAGTATCAACTCTCTGGATTACAA 57.866 34.615 0.00 0.00 33.75 2.41
2186 3838 8.035394 TGAAGTATCAACTCTCTGGATTACAAC 58.965 37.037 0.00 0.00 33.75 3.32
2187 3839 7.726033 AGTATCAACTCTCTGGATTACAACT 57.274 36.000 0.00 0.00 0.00 3.16
2189 3841 8.598041 AGTATCAACTCTCTGGATTACAACTTT 58.402 33.333 0.00 0.00 0.00 2.66
2190 3842 9.220767 GTATCAACTCTCTGGATTACAACTTTT 57.779 33.333 0.00 0.00 0.00 2.27
2192 3844 8.833231 TCAACTCTCTGGATTACAACTTTTAG 57.167 34.615 0.00 0.00 0.00 1.85
2193 3845 8.429641 TCAACTCTCTGGATTACAACTTTTAGT 58.570 33.333 0.00 0.00 0.00 2.24
2218 3919 6.530120 TGTTGAGTATGAGCCAAAGTTTAGA 58.470 36.000 0.00 0.00 0.00 2.10
2225 3926 1.886542 AGCCAAAGTTTAGAAAGGCCG 59.113 47.619 9.62 0.00 42.97 6.13
2226 3927 1.668919 GCCAAAGTTTAGAAAGGCCGC 60.669 52.381 0.00 0.00 36.17 6.53
2279 3986 4.413969 TGCTATGTTTTGCATCACAATCG 58.586 39.130 2.79 0.00 38.31 3.34
2291 3998 5.105917 TGCATCACAATCGTAGAACTACTGA 60.106 40.000 9.75 8.86 43.58 3.41
2365 4091 2.417243 GCTTGTGCACTTGTCCTGTTTT 60.417 45.455 19.41 0.00 39.41 2.43
2404 4132 8.974060 AAAACCTGTATGTTTCTGTTTCTCTA 57.026 30.769 0.00 0.00 37.46 2.43
2651 4382 0.842467 GCCACTGCCCTATCCCCTAT 60.842 60.000 0.00 0.00 0.00 2.57
2685 4416 4.954118 ACCGTGGCCAGTCCCTGA 62.954 66.667 5.11 0.00 32.44 3.86
2727 4458 2.270850 GCTTGGTCCCATACGGCA 59.729 61.111 0.00 0.00 0.00 5.69
2834 4565 3.374402 CTGGTGGTCGAGCGGAGT 61.374 66.667 10.46 0.00 0.00 3.85
3011 5326 4.307908 GCAACCGCGTCGCTGTTT 62.308 61.111 22.17 6.64 34.02 2.83
3107 5426 1.265905 CCGTTCAGTTGGCAAACCTAC 59.734 52.381 0.00 0.00 41.48 3.18
3114 5433 0.780637 TTGGCAAACCTACCCCATCA 59.219 50.000 0.00 0.00 36.63 3.07
3127 5447 2.700897 ACCCCATCAGTAGGAGAATTCG 59.299 50.000 0.00 0.00 0.00 3.34
3153 5473 3.817647 ACTCCATTCTGTTTGTGCTCTTC 59.182 43.478 0.00 0.00 0.00 2.87
3169 5489 0.676151 CTTCTCAGCTGTGCCCTTCC 60.676 60.000 14.67 0.00 0.00 3.46
3179 5499 4.660938 GCCCTTCCGGTTGCTGGT 62.661 66.667 0.00 0.00 0.00 4.00
3199 5519 7.142680 GCTGGTACTATCTTATCTCTGTTGTC 58.857 42.308 0.00 0.00 0.00 3.18
3216 5536 4.638421 TGTTGTCTTTCGAAGTTTGGTGAT 59.362 37.500 0.00 0.00 0.00 3.06
3217 5537 5.818336 TGTTGTCTTTCGAAGTTTGGTGATA 59.182 36.000 0.00 0.00 0.00 2.15
3222 5542 6.371825 GTCTTTCGAAGTTTGGTGATAGGATT 59.628 38.462 0.00 0.00 0.00 3.01
3257 5583 9.255304 TGGTTTAATTAAGTTGAAGACATTTGC 57.745 29.630 0.00 0.00 0.00 3.68
3282 5608 2.490903 GCCAAGCACATTCAGATGTTCT 59.509 45.455 0.00 0.00 43.92 3.01
3377 5708 2.169832 TGTAGGCAGCTGTTCTGAAC 57.830 50.000 16.64 13.49 45.72 3.18
3388 5719 6.677920 GCAGCTGTTCTGAACTTACTCAAAAA 60.678 38.462 20.18 0.00 45.72 1.94
3389 5720 6.909357 CAGCTGTTCTGAACTTACTCAAAAAG 59.091 38.462 20.18 7.32 45.72 2.27
3391 5722 7.769044 AGCTGTTCTGAACTTACTCAAAAAGTA 59.231 33.333 20.18 0.00 39.55 2.24
3392 5723 8.064814 GCTGTTCTGAACTTACTCAAAAAGTAG 58.935 37.037 20.18 6.30 41.47 2.57
3393 5724 9.099454 CTGTTCTGAACTTACTCAAAAAGTAGT 57.901 33.333 20.18 0.00 41.47 2.73
3394 5725 9.095065 TGTTCTGAACTTACTCAAAAAGTAGTC 57.905 33.333 20.18 0.00 41.47 2.59
3396 5727 8.019656 TCTGAACTTACTCAAAAAGTAGTCCT 57.980 34.615 0.00 0.00 41.47 3.85
3397 5728 8.483758 TCTGAACTTACTCAAAAAGTAGTCCTT 58.516 33.333 0.00 0.00 41.47 3.36
3398 5729 9.110502 CTGAACTTACTCAAAAAGTAGTCCTTT 57.889 33.333 0.00 0.00 45.39 3.11
3399 5730 9.106070 TGAACTTACTCAAAAAGTAGTCCTTTC 57.894 33.333 0.00 0.00 42.62 2.62
3400 5731 9.106070 GAACTTACTCAAAAAGTAGTCCTTTCA 57.894 33.333 0.00 0.00 42.62 2.69
3401 5732 9.628500 AACTTACTCAAAAAGTAGTCCTTTCAT 57.372 29.630 0.00 0.00 42.62 2.57
3402 5733 9.057089 ACTTACTCAAAAAGTAGTCCTTTCATG 57.943 33.333 0.00 0.00 42.62 3.07
3403 5734 6.884280 ACTCAAAAAGTAGTCCTTTCATGG 57.116 37.500 0.00 0.00 42.62 3.66
3404 5735 6.601332 ACTCAAAAAGTAGTCCTTTCATGGA 58.399 36.000 0.00 0.00 42.62 3.41
3405 5736 7.060421 ACTCAAAAAGTAGTCCTTTCATGGAA 58.940 34.615 0.00 0.00 42.62 3.53
3406 5737 7.725844 ACTCAAAAAGTAGTCCTTTCATGGAAT 59.274 33.333 0.00 0.00 42.62 3.01
3407 5738 9.231297 CTCAAAAAGTAGTCCTTTCATGGAATA 57.769 33.333 0.00 0.00 42.62 1.75
3409 5740 9.846248 CAAAAAGTAGTCCTTTCATGGAATAAG 57.154 33.333 0.00 0.00 42.62 1.73
3410 5741 9.588096 AAAAAGTAGTCCTTTCATGGAATAAGT 57.412 29.630 0.00 0.00 42.62 2.24
3411 5742 8.567285 AAAGTAGTCCTTTCATGGAATAAGTG 57.433 34.615 0.00 0.00 39.17 3.16
3412 5743 6.116126 AGTAGTCCTTTCATGGAATAAGTGC 58.884 40.000 0.00 0.00 38.22 4.40
3414 5745 4.946157 AGTCCTTTCATGGAATAAGTGCAG 59.054 41.667 0.00 0.00 37.93 4.41
3415 5746 4.943705 GTCCTTTCATGGAATAAGTGCAGA 59.056 41.667 0.00 0.00 37.93 4.26
3417 5748 6.096001 GTCCTTTCATGGAATAAGTGCAGATT 59.904 38.462 0.00 0.00 37.93 2.40
3418 5749 6.664816 TCCTTTCATGGAATAAGTGCAGATTT 59.335 34.615 0.00 0.00 32.39 2.17
3419 5750 6.755141 CCTTTCATGGAATAAGTGCAGATTTG 59.245 38.462 0.00 0.00 0.00 2.32
3420 5751 6.839124 TTCATGGAATAAGTGCAGATTTGT 57.161 33.333 0.00 0.00 0.00 2.83
3421 5752 6.441093 TCATGGAATAAGTGCAGATTTGTC 57.559 37.500 0.00 0.00 0.00 3.18
3422 5753 5.945191 TCATGGAATAAGTGCAGATTTGTCA 59.055 36.000 0.00 0.00 0.00 3.58
3423 5754 5.885230 TGGAATAAGTGCAGATTTGTCAG 57.115 39.130 0.00 0.00 0.00 3.51
3424 5755 4.701651 TGGAATAAGTGCAGATTTGTCAGG 59.298 41.667 0.00 0.00 0.00 3.86
3427 5758 2.645838 AGTGCAGATTTGTCAGGTGT 57.354 45.000 0.00 0.00 0.00 4.16
3429 5760 3.290710 AGTGCAGATTTGTCAGGTGTTT 58.709 40.909 0.00 0.00 0.00 2.83
3430 5761 3.067180 AGTGCAGATTTGTCAGGTGTTTG 59.933 43.478 0.00 0.00 0.00 2.93
3431 5762 2.361757 TGCAGATTTGTCAGGTGTTTGG 59.638 45.455 0.00 0.00 0.00 3.28
3433 5764 3.181476 GCAGATTTGTCAGGTGTTTGGTT 60.181 43.478 0.00 0.00 0.00 3.67
3434 5765 4.610945 CAGATTTGTCAGGTGTTTGGTTC 58.389 43.478 0.00 0.00 0.00 3.62
3435 5766 3.636764 AGATTTGTCAGGTGTTTGGTTCC 59.363 43.478 0.00 0.00 0.00 3.62
3436 5767 2.516227 TTGTCAGGTGTTTGGTTCCA 57.484 45.000 0.00 0.00 0.00 3.53
3437 5768 2.746279 TGTCAGGTGTTTGGTTCCAT 57.254 45.000 0.00 0.00 0.00 3.41
3442 5773 0.749649 GGTGTTTGGTTCCATGTGCA 59.250 50.000 0.00 0.00 0.00 4.57
3443 5774 1.537990 GGTGTTTGGTTCCATGTGCAC 60.538 52.381 10.75 10.75 0.00 4.57
3444 5775 1.408702 GTGTTTGGTTCCATGTGCACT 59.591 47.619 19.41 0.15 0.00 4.40
3445 5776 2.106566 TGTTTGGTTCCATGTGCACTT 58.893 42.857 19.41 9.21 0.00 3.16
3447 5778 2.362077 GTTTGGTTCCATGTGCACTTCT 59.638 45.455 19.41 0.00 0.00 2.85
3448 5779 2.363306 TGGTTCCATGTGCACTTCTT 57.637 45.000 19.41 0.00 0.00 2.52
3449 5780 2.665165 TGGTTCCATGTGCACTTCTTT 58.335 42.857 19.41 0.00 0.00 2.52
3450 5781 3.030291 TGGTTCCATGTGCACTTCTTTT 58.970 40.909 19.41 0.00 0.00 2.27
3451 5782 3.450457 TGGTTCCATGTGCACTTCTTTTT 59.550 39.130 19.41 0.00 0.00 1.94
3452 5783 4.646945 TGGTTCCATGTGCACTTCTTTTTA 59.353 37.500 19.41 0.00 0.00 1.52
3453 5784 5.304101 TGGTTCCATGTGCACTTCTTTTTAT 59.696 36.000 19.41 0.00 0.00 1.40
3454 5785 5.863935 GGTTCCATGTGCACTTCTTTTTATC 59.136 40.000 19.41 0.00 0.00 1.75
3455 5786 5.643379 TCCATGTGCACTTCTTTTTATCC 57.357 39.130 19.41 0.00 0.00 2.59
3456 5787 4.155826 TCCATGTGCACTTCTTTTTATCCG 59.844 41.667 19.41 0.00 0.00 4.18
3458 5789 4.742438 TGTGCACTTCTTTTTATCCGAC 57.258 40.909 19.41 0.00 0.00 4.79
3459 5790 4.130857 TGTGCACTTCTTTTTATCCGACA 58.869 39.130 19.41 0.00 0.00 4.35
3461 5792 4.213482 GTGCACTTCTTTTTATCCGACAGT 59.787 41.667 10.32 0.00 0.00 3.55
3462 5793 4.213270 TGCACTTCTTTTTATCCGACAGTG 59.787 41.667 0.00 0.00 34.71 3.66
3463 5794 4.213482 GCACTTCTTTTTATCCGACAGTGT 59.787 41.667 0.00 0.00 34.20 3.55
3464 5795 5.679906 CACTTCTTTTTATCCGACAGTGTG 58.320 41.667 0.00 0.00 0.00 3.82
3465 5796 5.236478 CACTTCTTTTTATCCGACAGTGTGT 59.764 40.000 0.00 0.00 0.00 3.72
3466 5797 5.820947 ACTTCTTTTTATCCGACAGTGTGTT 59.179 36.000 0.00 0.00 0.00 3.32
3468 5799 6.055231 TCTTTTTATCCGACAGTGTGTTTG 57.945 37.500 0.00 0.00 0.00 2.93
3469 5800 3.889196 TTTATCCGACAGTGTGTTTGC 57.111 42.857 0.00 0.00 0.00 3.68
3470 5801 1.424403 TATCCGACAGTGTGTTTGCG 58.576 50.000 0.00 0.00 0.00 4.85
3471 5802 1.227999 ATCCGACAGTGTGTTTGCGG 61.228 55.000 12.80 12.80 36.92 5.69
3472 5803 2.177580 CCGACAGTGTGTTTGCGGT 61.178 57.895 0.00 0.00 33.55 5.68
3474 5805 0.098025 CGACAGTGTGTTTGCGGTTT 59.902 50.000 0.00 0.00 0.00 3.27
3475 5806 1.466697 CGACAGTGTGTTTGCGGTTTT 60.467 47.619 0.00 0.00 0.00 2.43
3478 5809 2.230266 ACAGTGTGTTTGCGGTTTTTCT 59.770 40.909 0.00 0.00 0.00 2.52
3480 5811 2.752903 AGTGTGTTTGCGGTTTTTCTCT 59.247 40.909 0.00 0.00 0.00 3.10
3481 5812 3.942748 AGTGTGTTTGCGGTTTTTCTCTA 59.057 39.130 0.00 0.00 0.00 2.43
3483 5814 5.761234 AGTGTGTTTGCGGTTTTTCTCTATA 59.239 36.000 0.00 0.00 0.00 1.31
3484 5815 6.430000 AGTGTGTTTGCGGTTTTTCTCTATAT 59.570 34.615 0.00 0.00 0.00 0.86
3485 5816 6.523201 GTGTGTTTGCGGTTTTTCTCTATATG 59.477 38.462 0.00 0.00 0.00 1.78
3486 5817 5.511729 GTGTTTGCGGTTTTTCTCTATATGC 59.488 40.000 0.00 0.00 0.00 3.14
3487 5818 5.182190 TGTTTGCGGTTTTTCTCTATATGCA 59.818 36.000 0.00 0.00 0.00 3.96
3489 5820 5.229921 TGCGGTTTTTCTCTATATGCAAC 57.770 39.130 0.00 0.00 0.00 4.17
3490 5821 4.941263 TGCGGTTTTTCTCTATATGCAACT 59.059 37.500 0.00 0.00 0.00 3.16
3491 5822 6.110033 TGCGGTTTTTCTCTATATGCAACTA 58.890 36.000 0.00 0.00 0.00 2.24
3492 5823 6.765989 TGCGGTTTTTCTCTATATGCAACTAT 59.234 34.615 0.00 0.00 0.00 2.12
3493 5824 7.072030 GCGGTTTTTCTCTATATGCAACTATG 58.928 38.462 0.00 0.00 0.00 2.23
3510 5841 7.715264 CAACTATGCATGCATGTATTTATCG 57.285 36.000 37.43 17.81 37.82 2.92
3512 5843 7.439157 ACTATGCATGCATGTATTTATCGTT 57.561 32.000 37.43 14.38 37.82 3.85
3514 5845 8.998377 ACTATGCATGCATGTATTTATCGTTAA 58.002 29.630 37.43 15.27 37.82 2.01
3520 6224 9.236691 CATGCATGTATTTATCGTTAAGCTTTT 57.763 29.630 18.91 0.00 0.00 2.27
3523 6227 8.947940 GCATGTATTTATCGTTAAGCTTTTGAG 58.052 33.333 3.20 0.00 0.00 3.02
3526 6230 4.957759 TTATCGTTAAGCTTTTGAGCCC 57.042 40.909 3.20 0.00 34.90 5.19
3527 6231 2.264005 TCGTTAAGCTTTTGAGCCCA 57.736 45.000 3.20 0.00 34.90 5.36
3543 6247 6.926630 TGAGCCCAAACTTTATTGGTTAAT 57.073 33.333 5.44 0.00 46.94 1.40
3544 6248 7.309770 TGAGCCCAAACTTTATTGGTTAATT 57.690 32.000 5.44 0.00 46.94 1.40
3587 6331 9.410556 GTTCTACAAATACAAAATGCAGAATGT 57.589 29.630 0.00 0.00 39.31 2.71
3593 6337 9.409312 CAAATACAAAATGCAGAATGTAGACAA 57.591 29.630 12.10 0.00 39.31 3.18
3601 6345 3.681897 GCAGAATGTAGACAACTGTCCTG 59.318 47.826 16.10 6.69 41.82 3.86
3617 6361 5.992217 ACTGTCCTGAATTTACTCAACACTC 59.008 40.000 0.00 0.00 0.00 3.51
3624 6368 5.995282 TGAATTTACTCAACACTCGGAACAT 59.005 36.000 0.00 0.00 0.00 2.71
3630 6374 3.738982 TCAACACTCGGAACATCACATT 58.261 40.909 0.00 0.00 0.00 2.71
3640 6384 3.273434 GAACATCACATTGCAGCTAGGA 58.727 45.455 0.00 0.00 0.00 2.94
3652 6396 3.028921 GCTAGGAGCTGCTGGCACT 62.029 63.158 33.36 3.05 44.79 4.40
3659 6417 1.669779 GAGCTGCTGGCACTATTTCAG 59.330 52.381 7.01 0.00 44.79 3.02
3666 6424 2.237143 CTGGCACTATTTCAGTCCCTCA 59.763 50.000 0.00 0.00 35.88 3.86
3673 6431 5.065218 CACTATTTCAGTCCCTCAAATTCGG 59.935 44.000 0.00 0.00 34.26 4.30
3674 6432 3.502123 TTTCAGTCCCTCAAATTCGGT 57.498 42.857 0.00 0.00 0.00 4.69
3698 6456 3.119955 CGACTGTTCGGTCATCTCTACAA 60.120 47.826 11.54 0.00 41.89 2.41
3699 6457 4.438880 CGACTGTTCGGTCATCTCTACAAT 60.439 45.833 11.54 0.00 41.89 2.71
3700 6458 5.000012 ACTGTTCGGTCATCTCTACAATC 58.000 43.478 0.00 0.00 0.00 2.67
3701 6459 4.707448 ACTGTTCGGTCATCTCTACAATCT 59.293 41.667 0.00 0.00 0.00 2.40
3703 6461 5.410924 TGTTCGGTCATCTCTACAATCTTG 58.589 41.667 0.00 0.00 0.00 3.02
3717 6480 6.988580 TCTACAATCTTGTTAGCATCATCTGG 59.011 38.462 0.20 0.00 42.35 3.86
3731 6494 5.392380 GCATCATCTGGTTGAACGATTTCTT 60.392 40.000 0.00 0.00 32.36 2.52
3734 6497 5.997746 TCATCTGGTTGAACGATTTCTTCTT 59.002 36.000 0.00 0.00 32.36 2.52
3735 6498 7.158697 TCATCTGGTTGAACGATTTCTTCTTA 58.841 34.615 0.00 0.00 32.36 2.10
3736 6499 7.331934 TCATCTGGTTGAACGATTTCTTCTTAG 59.668 37.037 0.00 0.00 32.36 2.18
3737 6500 5.408604 TCTGGTTGAACGATTTCTTCTTAGC 59.591 40.000 0.00 0.00 32.36 3.09
3738 6501 5.060506 TGGTTGAACGATTTCTTCTTAGCA 58.939 37.500 0.00 0.00 32.36 3.49
3739 6502 5.705441 TGGTTGAACGATTTCTTCTTAGCAT 59.295 36.000 0.00 0.00 32.36 3.79
3740 6503 6.128282 TGGTTGAACGATTTCTTCTTAGCATC 60.128 38.462 0.00 0.00 32.36 3.91
3741 6504 6.128282 GGTTGAACGATTTCTTCTTAGCATCA 60.128 38.462 0.00 0.00 32.36 3.07
3743 6506 7.239166 TGAACGATTTCTTCTTAGCATCATC 57.761 36.000 0.00 0.00 32.36 2.92
3744 6507 7.044181 TGAACGATTTCTTCTTAGCATCATCT 58.956 34.615 0.00 0.00 32.36 2.90
3745 6508 6.841443 ACGATTTCTTCTTAGCATCATCTG 57.159 37.500 0.00 0.00 0.00 2.90
3746 6509 5.757320 ACGATTTCTTCTTAGCATCATCTGG 59.243 40.000 0.00 0.00 0.00 3.86
3747 6510 5.987953 CGATTTCTTCTTAGCATCATCTGGA 59.012 40.000 0.00 0.00 0.00 3.86
3764 6527 2.621998 CTGGATGCCCATCTGATGTTTC 59.378 50.000 15.95 7.20 42.59 2.78
3768 6531 0.743097 GCCCATCTGATGTTTCTGCC 59.257 55.000 15.95 0.00 0.00 4.85
3778 6541 0.461870 TGTTTCTGCCCCATCGATCG 60.462 55.000 9.36 9.36 0.00 3.69
3779 6542 1.523711 TTTCTGCCCCATCGATCGC 60.524 57.895 11.09 0.00 0.00 4.58
3786 6549 2.894879 CCATCGATCGCGCCCAAA 60.895 61.111 11.09 0.00 37.46 3.28
3788 6551 1.427419 CATCGATCGCGCCCAAAAA 59.573 52.632 11.09 0.00 37.46 1.94
3824 7852 3.312697 ACTCCGACAAGAAGAGCAAAAAC 59.687 43.478 0.00 0.00 0.00 2.43
3841 7869 5.294060 GCAAAAACAAAGCTCCAATTTGAGA 59.706 36.000 10.62 0.00 39.50 3.27
3872 7900 3.008330 CCTCTCTGCTTCAAACATCAGG 58.992 50.000 0.00 0.00 0.00 3.86
3874 7902 4.070716 CTCTCTGCTTCAAACATCAGGTT 58.929 43.478 0.00 0.00 42.98 3.50
3877 7905 2.886523 CTGCTTCAAACATCAGGTTGGA 59.113 45.455 0.00 0.00 40.35 3.53
3878 7906 3.499338 TGCTTCAAACATCAGGTTGGAT 58.501 40.909 0.00 0.00 39.19 3.41
3879 7907 3.507233 TGCTTCAAACATCAGGTTGGATC 59.493 43.478 0.00 0.00 39.19 3.36
3882 7910 3.955471 TCAAACATCAGGTTGGATCTCC 58.045 45.455 0.00 0.00 40.35 3.71
3883 7911 3.019564 CAAACATCAGGTTGGATCTCCC 58.980 50.000 0.00 0.00 40.35 4.30
3884 7912 2.277008 ACATCAGGTTGGATCTCCCT 57.723 50.000 0.00 0.00 35.38 4.20
3885 7913 1.842562 ACATCAGGTTGGATCTCCCTG 59.157 52.381 15.47 15.47 45.81 4.45
3886 7914 1.142465 CATCAGGTTGGATCTCCCTGG 59.858 57.143 19.12 6.78 44.78 4.45
3887 7915 0.417437 TCAGGTTGGATCTCCCTGGA 59.583 55.000 19.12 8.73 44.78 3.86
3888 7916 0.835941 CAGGTTGGATCTCCCTGGAG 59.164 60.000 6.88 6.88 41.69 3.86
3889 7917 0.327000 AGGTTGGATCTCCCTGGAGG 60.327 60.000 13.12 0.00 42.20 4.30
3891 7919 0.543749 GTTGGATCTCCCTGGAGGTG 59.456 60.000 13.12 0.00 42.20 4.00
3894 7922 1.055040 GGATCTCCCTGGAGGTGATG 58.945 60.000 13.12 0.00 46.60 3.07
3895 7923 1.055040 GATCTCCCTGGAGGTGATGG 58.945 60.000 13.12 0.00 46.60 3.51
3896 7924 0.344790 ATCTCCCTGGAGGTGATGGT 59.655 55.000 13.12 0.00 45.24 3.55
3897 7925 0.618680 TCTCCCTGGAGGTGATGGTG 60.619 60.000 13.12 0.00 42.20 4.17
3898 7926 1.616327 TCCCTGGAGGTGATGGTGG 60.616 63.158 0.00 0.00 36.75 4.61
3900 7928 2.273449 CTGGAGGTGATGGTGGGC 59.727 66.667 0.00 0.00 0.00 5.36
3901 7929 2.204136 TGGAGGTGATGGTGGGCT 60.204 61.111 0.00 0.00 0.00 5.19
3902 7930 1.852157 TGGAGGTGATGGTGGGCTT 60.852 57.895 0.00 0.00 0.00 4.35
3903 7931 1.077429 GGAGGTGATGGTGGGCTTC 60.077 63.158 0.00 0.00 0.00 3.86
3904 7932 1.566298 GGAGGTGATGGTGGGCTTCT 61.566 60.000 0.00 0.00 0.00 2.85
3905 7933 0.329596 GAGGTGATGGTGGGCTTCTT 59.670 55.000 0.00 0.00 0.00 2.52
3906 7934 0.038744 AGGTGATGGTGGGCTTCTTG 59.961 55.000 0.00 0.00 0.00 3.02
3907 7935 1.598701 GGTGATGGTGGGCTTCTTGC 61.599 60.000 0.00 0.00 41.94 4.01
3908 7936 0.610232 GTGATGGTGGGCTTCTTGCT 60.610 55.000 0.00 0.00 42.39 3.91
3909 7937 0.609957 TGATGGTGGGCTTCTTGCTG 60.610 55.000 0.00 0.00 42.39 4.41
3910 7938 0.610232 GATGGTGGGCTTCTTGCTGT 60.610 55.000 0.00 0.00 42.39 4.40
3912 7940 0.250727 TGGTGGGCTTCTTGCTGTAC 60.251 55.000 0.00 0.00 42.39 2.90
3914 7942 1.003839 TGGGCTTCTTGCTGTACCG 60.004 57.895 0.00 0.00 42.39 4.02
3917 7945 2.399356 GCTTCTTGCTGTACCGGGC 61.399 63.158 6.32 0.00 38.95 6.13
3919 7947 0.605319 CTTCTTGCTGTACCGGGCAA 60.605 55.000 14.05 14.05 44.64 4.52
3921 7949 2.671619 TTGCTGTACCGGGCAAGC 60.672 61.111 11.25 13.43 42.45 4.01
3922 7950 3.190738 TTGCTGTACCGGGCAAGCT 62.191 57.895 20.70 0.00 42.45 3.74
3923 7951 2.359975 GCTGTACCGGGCAAGCTT 60.360 61.111 6.32 0.00 0.00 3.74
3924 7952 2.690778 GCTGTACCGGGCAAGCTTG 61.691 63.158 22.44 22.44 0.00 4.01
3925 7953 2.033448 TGTACCGGGCAAGCTTGG 59.967 61.111 27.10 13.50 0.00 3.61
3932 7960 3.435186 GGCAAGCTTGGCGGACTC 61.435 66.667 33.68 12.76 43.97 3.36
3933 7961 3.793144 GCAAGCTTGGCGGACTCG 61.793 66.667 27.10 0.00 39.81 4.18
3934 7962 3.121030 CAAGCTTGGCGGACTCGG 61.121 66.667 19.14 0.00 36.79 4.63
3967 7995 1.726791 CGAAGATGTCGTTGGTGAAGG 59.273 52.381 0.00 0.00 45.09 3.46
3968 7996 2.609491 CGAAGATGTCGTTGGTGAAGGA 60.609 50.000 0.00 0.00 45.09 3.36
3969 7997 2.751166 AGATGTCGTTGGTGAAGGAG 57.249 50.000 0.00 0.00 0.00 3.69
3970 7998 1.971357 AGATGTCGTTGGTGAAGGAGT 59.029 47.619 0.00 0.00 0.00 3.85
3971 7999 2.368875 AGATGTCGTTGGTGAAGGAGTT 59.631 45.455 0.00 0.00 0.00 3.01
3972 8000 2.234300 TGTCGTTGGTGAAGGAGTTC 57.766 50.000 0.00 0.00 0.00 3.01
3973 8001 1.483004 TGTCGTTGGTGAAGGAGTTCA 59.517 47.619 0.00 0.00 40.55 3.18
3974 8002 2.104111 TGTCGTTGGTGAAGGAGTTCAT 59.896 45.455 0.00 0.00 44.58 2.57
3975 8003 2.480419 GTCGTTGGTGAAGGAGTTCATG 59.520 50.000 0.00 0.00 44.58 3.07
3977 8005 3.007940 TCGTTGGTGAAGGAGTTCATGAT 59.992 43.478 0.00 0.00 44.58 2.45
3978 8006 3.125829 CGTTGGTGAAGGAGTTCATGATG 59.874 47.826 0.00 0.00 44.58 3.07
3979 8007 3.354948 TGGTGAAGGAGTTCATGATGG 57.645 47.619 0.00 0.00 44.58 3.51
3980 8008 2.025981 TGGTGAAGGAGTTCATGATGGG 60.026 50.000 0.00 0.00 44.58 4.00
3982 8010 1.634973 TGAAGGAGTTCATGATGGGCA 59.365 47.619 0.00 0.00 37.79 5.36
3997 8025 2.683465 GGCATGGCCTTGGAGGAGA 61.683 63.158 19.47 0.00 46.69 3.71
3998 8026 1.535685 GCATGGCCTTGGAGGAGAT 59.464 57.895 19.47 0.00 37.67 2.75
3999 8027 0.822532 GCATGGCCTTGGAGGAGATG 60.823 60.000 19.47 5.23 37.67 2.90
4000 8028 0.822532 CATGGCCTTGGAGGAGATGC 60.823 60.000 10.81 0.00 37.67 3.91
4001 8029 2.004408 ATGGCCTTGGAGGAGATGCC 62.004 60.000 3.32 0.00 37.67 4.40
4003 8031 2.683465 GCCTTGGAGGAGATGCCCA 61.683 63.158 0.00 0.00 37.67 5.36
4005 8033 0.110104 CCTTGGAGGAGATGCCCATC 59.890 60.000 0.00 0.00 37.67 3.51
4018 9041 3.402681 CCATCTCCGGGTGCACCT 61.403 66.667 33.91 11.78 36.97 4.00
4023 9046 4.329545 TCCGGGTGCACCTGCTTC 62.330 66.667 35.40 18.07 41.13 3.86
4036 9059 3.744559 GCTTCGGCACCTTGAACA 58.255 55.556 0.00 0.00 41.33 3.18
4037 9060 1.576421 GCTTCGGCACCTTGAACAG 59.424 57.895 0.00 0.00 41.33 3.16
4050 9073 5.941555 CCTTGAACAGGTAGATCCTAAGT 57.058 43.478 0.00 0.00 46.24 2.24
4051 9074 6.301169 CCTTGAACAGGTAGATCCTAAGTT 57.699 41.667 0.00 0.00 46.24 2.66
4052 9075 7.419711 CCTTGAACAGGTAGATCCTAAGTTA 57.580 40.000 0.00 0.00 46.24 2.24
4053 9076 7.266400 CCTTGAACAGGTAGATCCTAAGTTAC 58.734 42.308 0.00 0.00 46.24 2.50
4054 9077 6.786967 TGAACAGGTAGATCCTAAGTTACC 57.213 41.667 0.00 0.00 46.24 2.85
4055 9078 5.659971 TGAACAGGTAGATCCTAAGTTACCC 59.340 44.000 3.59 0.00 46.24 3.69
4056 9079 4.213513 ACAGGTAGATCCTAAGTTACCCG 58.786 47.826 3.59 0.00 46.24 5.28
4057 9080 3.573110 CAGGTAGATCCTAAGTTACCCGG 59.427 52.174 0.00 0.00 46.24 5.73
4059 9082 4.107636 AGGTAGATCCTAAGTTACCCGGAT 59.892 45.833 0.73 2.57 46.10 4.18
4060 9083 5.314306 AGGTAGATCCTAAGTTACCCGGATA 59.686 44.000 0.73 0.00 46.10 2.59
4062 9085 5.336491 AGATCCTAAGTTACCCGGATACT 57.664 43.478 0.73 0.00 36.44 2.12
4063 9086 5.713807 AGATCCTAAGTTACCCGGATACTT 58.286 41.667 0.73 11.83 36.44 2.24
4064 9087 5.774184 AGATCCTAAGTTACCCGGATACTTC 59.226 44.000 15.90 5.51 36.44 3.01
4065 9088 5.134725 TCCTAAGTTACCCGGATACTTCT 57.865 43.478 15.90 0.00 34.26 2.85
4066 9089 4.891756 TCCTAAGTTACCCGGATACTTCTG 59.108 45.833 15.90 11.48 34.26 3.02
4067 9090 4.891756 CCTAAGTTACCCGGATACTTCTGA 59.108 45.833 15.90 2.92 34.26 3.27
4068 9091 5.361857 CCTAAGTTACCCGGATACTTCTGAA 59.638 44.000 15.90 0.00 34.26 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 3.073798 TGTGGACTTTGGAGGAGCAAATA 59.926 43.478 0.00 0.00 0.00 1.40
80 81 1.417890 ACTGTGTGGACTTTGGAGGAG 59.582 52.381 0.00 0.00 0.00 3.69
113 121 0.096976 CATTTGGTAGCTTGGCGTCG 59.903 55.000 0.00 0.00 0.00 5.12
120 128 3.005791 GGTTGAGCAACATTTGGTAGCTT 59.994 43.478 14.55 0.00 42.23 3.74
139 154 1.302832 CTTCCCAGCTGCTTCGGTT 60.303 57.895 8.66 0.00 0.00 4.44
150 165 1.895707 GGGCGATGATGCTTCCCAG 60.896 63.158 0.00 0.00 36.96 4.45
190 205 2.865598 CGGCGAGATCCTGGCTCAT 61.866 63.158 0.00 0.00 35.57 2.90
271 287 7.042335 GCACTTTACTTCGGCTGGATATATAT 58.958 38.462 0.00 0.00 0.00 0.86
277 293 1.679032 GGCACTTTACTTCGGCTGGAT 60.679 52.381 0.00 0.00 0.00 3.41
317 336 6.092259 GGTTGTTCGCTAATGAGAGTTATGTT 59.908 38.462 0.00 0.00 0.00 2.71
333 352 2.223618 TGGCTTAAGTTTGGTTGTTCGC 60.224 45.455 4.02 0.00 0.00 4.70
425 444 4.255833 TGGAAAAGCACATGTCCAATTC 57.744 40.909 0.00 0.00 37.22 2.17
467 488 9.159254 TCCTAAGTAGTAATGATGGACATGAAT 57.841 33.333 0.00 0.00 39.39 2.57
479 500 4.444449 GCCCCTTGGTCCTAAGTAGTAATG 60.444 50.000 0.00 0.00 0.00 1.90
573 1937 8.196771 TGGGTTCAATTATATGAATCAAACAGC 58.803 33.333 3.06 0.00 41.29 4.40
728 2103 8.508875 TCCTATGAAATTCTCGTTTGTTTTACC 58.491 33.333 0.00 0.00 0.00 2.85
731 2106 9.626045 GAATCCTATGAAATTCTCGTTTGTTTT 57.374 29.630 0.00 0.00 0.00 2.43
815 2198 8.688747 AGATATTTCTTGCTCTTCCAAATAGG 57.311 34.615 0.00 0.00 39.47 2.57
817 2200 9.685276 TGAAGATATTTCTTGCTCTTCCAAATA 57.315 29.630 2.90 0.00 42.34 1.40
818 2201 8.585471 TGAAGATATTTCTTGCTCTTCCAAAT 57.415 30.769 2.90 0.00 42.34 2.32
819 2202 8.408043 TTGAAGATATTTCTTGCTCTTCCAAA 57.592 30.769 2.90 0.00 42.34 3.28
948 2374 1.227853 TCGATCGATCTCCCGCTCA 60.228 57.895 22.43 0.00 0.00 4.26
992 2418 1.000739 ACCTTGGCCATGGTGGATG 59.999 57.895 35.83 14.26 40.96 3.51
993 2419 1.000739 CACCTTGGCCATGGTGGAT 59.999 57.895 42.94 22.99 46.78 3.41
994 2420 2.440147 CACCTTGGCCATGGTGGA 59.560 61.111 42.94 16.45 46.78 4.02
1022 2449 3.202706 GGACGGGGAGAAATGCGC 61.203 66.667 0.00 0.00 0.00 6.09
1139 2580 1.006571 ACTTCCACGTACACCAGCG 60.007 57.895 0.00 0.00 0.00 5.18
1143 2584 0.949105 CTGCCACTTCCACGTACACC 60.949 60.000 0.00 0.00 0.00 4.16
1147 2588 2.345991 GGCTGCCACTTCCACGTA 59.654 61.111 15.17 0.00 0.00 3.57
1229 2674 0.179248 GCGCGCTACACTCAGTTTTC 60.179 55.000 26.67 0.00 0.00 2.29
1335 2886 5.830457 TGATACAGGACACCAAAATGTTGAA 59.170 36.000 0.00 0.00 36.83 2.69
1337 2888 5.703978 TGATACAGGACACCAAAATGTTG 57.296 39.130 0.00 0.00 31.24 3.33
1350 2906 6.280855 TCAGATCGAAAACTTGATACAGGA 57.719 37.500 0.00 0.00 0.00 3.86
1376 2932 2.673326 CGATCTGTCAGCTTCAGCAGAA 60.673 50.000 9.95 0.00 45.16 3.02
1377 2933 1.135170 CGATCTGTCAGCTTCAGCAGA 60.135 52.381 9.95 9.05 45.16 4.26
1380 2936 1.427592 GCCGATCTGTCAGCTTCAGC 61.428 60.000 9.95 0.00 42.49 4.26
1386 2942 0.104855 TGTATGGCCGATCTGTCAGC 59.895 55.000 0.00 0.00 0.00 4.26
1391 2947 5.947228 AAATAACATGTATGGCCGATCTG 57.053 39.130 0.00 0.00 0.00 2.90
1392 2948 5.643777 GCTAAATAACATGTATGGCCGATCT 59.356 40.000 0.00 0.00 0.00 2.75
1408 2964 9.890629 ATATGACAGTGAAGTGAAGCTAAATAA 57.109 29.630 0.00 0.00 0.00 1.40
1413 2970 7.436933 CCATATATGACAGTGAAGTGAAGCTA 58.563 38.462 14.54 0.00 0.00 3.32
1414 2971 6.286758 CCATATATGACAGTGAAGTGAAGCT 58.713 40.000 14.54 0.00 0.00 3.74
1421 2978 5.642491 CAGATGGCCATATATGACAGTGAAG 59.358 44.000 20.84 0.00 0.00 3.02
1445 3002 5.941948 ACAAAGTTGCTGACCAGTAATAC 57.058 39.130 4.00 0.00 35.57 1.89
1459 3016 3.670627 GCTCCCAGCGAAATACAAAGTTG 60.671 47.826 0.00 0.00 0.00 3.16
1467 3024 2.564771 CAGATTGCTCCCAGCGAAATA 58.435 47.619 0.00 0.00 46.26 1.40
1533 3090 3.166679 ACTCGACCTTAGCCTTCTTTCT 58.833 45.455 0.00 0.00 0.00 2.52
1546 3103 4.361971 TGGCCTCGGACTCGACCT 62.362 66.667 3.32 0.00 40.88 3.85
1634 3191 1.384191 GAACAGGGGTGGAGCCAAT 59.616 57.895 0.00 0.00 39.65 3.16
1649 3206 5.161943 AGGTTCTGTTATGTACCTGGAAC 57.838 43.478 0.00 0.00 39.47 3.62
1660 3217 7.004555 TCATCACACTACAAGGTTCTGTTAT 57.995 36.000 0.00 0.00 0.00 1.89
1661 3218 6.413783 TCATCACACTACAAGGTTCTGTTA 57.586 37.500 0.00 0.00 0.00 2.41
1671 3228 7.399191 AGGGAATACTAGTTCATCACACTACAA 59.601 37.037 0.00 0.00 0.00 2.41
1678 3235 7.103641 TGACAAAGGGAATACTAGTTCATCAC 58.896 38.462 0.00 0.00 0.00 3.06
1679 3236 7.252612 TGACAAAGGGAATACTAGTTCATCA 57.747 36.000 0.00 0.00 0.00 3.07
1680 3237 8.561738 TTTGACAAAGGGAATACTAGTTCATC 57.438 34.615 0.00 0.00 0.00 2.92
1681 3238 8.960591 CATTTGACAAAGGGAATACTAGTTCAT 58.039 33.333 0.00 0.00 0.00 2.57
1682 3239 7.094377 GCATTTGACAAAGGGAATACTAGTTCA 60.094 37.037 13.93 0.00 0.00 3.18
1684 3241 6.948309 AGCATTTGACAAAGGGAATACTAGTT 59.052 34.615 13.93 0.00 0.00 2.24
1697 3254 4.339872 AATGGAGCAAGCATTTGACAAA 57.660 36.364 2.48 2.48 36.36 2.83
1752 3309 6.017400 AGAAAATCATAACCTGCAACACAG 57.983 37.500 0.00 0.00 46.77 3.66
1754 3311 7.750903 GTCTAAGAAAATCATAACCTGCAACAC 59.249 37.037 0.00 0.00 0.00 3.32
1755 3312 7.446931 TGTCTAAGAAAATCATAACCTGCAACA 59.553 33.333 0.00 0.00 0.00 3.33
1756 3313 7.816640 TGTCTAAGAAAATCATAACCTGCAAC 58.183 34.615 0.00 0.00 0.00 4.17
1757 3314 7.994425 TGTCTAAGAAAATCATAACCTGCAA 57.006 32.000 0.00 0.00 0.00 4.08
1758 3315 8.579850 AATGTCTAAGAAAATCATAACCTGCA 57.420 30.769 0.00 0.00 0.00 4.41
1766 3323 9.118300 GACCAGATGAATGTCTAAGAAAATCAT 57.882 33.333 0.00 0.00 0.00 2.45
1767 3324 8.324306 AGACCAGATGAATGTCTAAGAAAATCA 58.676 33.333 0.00 0.00 37.58 2.57
1768 3325 8.610896 CAGACCAGATGAATGTCTAAGAAAATC 58.389 37.037 0.00 0.00 37.25 2.17
1769 3326 7.555554 CCAGACCAGATGAATGTCTAAGAAAAT 59.444 37.037 0.00 0.00 37.25 1.82
1770 3327 6.881065 CCAGACCAGATGAATGTCTAAGAAAA 59.119 38.462 0.00 0.00 37.25 2.29
1771 3328 6.213397 TCCAGACCAGATGAATGTCTAAGAAA 59.787 38.462 0.00 0.00 37.25 2.52
1772 3329 5.721480 TCCAGACCAGATGAATGTCTAAGAA 59.279 40.000 0.00 0.00 37.25 2.52
1773 3330 5.272402 TCCAGACCAGATGAATGTCTAAGA 58.728 41.667 0.00 0.00 37.25 2.10
1774 3331 5.604758 TCCAGACCAGATGAATGTCTAAG 57.395 43.478 0.00 0.00 37.25 2.18
1779 3336 4.946157 GTGAAATCCAGACCAGATGAATGT 59.054 41.667 0.00 0.00 0.00 2.71
1780 3337 4.337555 GGTGAAATCCAGACCAGATGAATG 59.662 45.833 0.00 0.00 0.00 2.67
1781 3338 4.018141 TGGTGAAATCCAGACCAGATGAAT 60.018 41.667 0.00 0.00 34.75 2.57
1783 3340 2.912295 TGGTGAAATCCAGACCAGATGA 59.088 45.455 0.00 0.00 34.75 2.92
1784 3341 3.354948 TGGTGAAATCCAGACCAGATG 57.645 47.619 0.00 0.00 34.75 2.90
1785 3342 3.331889 ACTTGGTGAAATCCAGACCAGAT 59.668 43.478 0.00 0.00 40.81 2.90
1787 3344 3.146104 ACTTGGTGAAATCCAGACCAG 57.854 47.619 0.00 0.00 40.81 4.00
1788 3345 4.622933 CGATACTTGGTGAAATCCAGACCA 60.623 45.833 0.00 0.00 38.80 4.02
1789 3346 3.871594 CGATACTTGGTGAAATCCAGACC 59.128 47.826 0.00 0.00 38.80 3.85
1791 3348 3.531538 GCGATACTTGGTGAAATCCAGA 58.468 45.455 0.00 0.00 38.80 3.86
1792 3349 2.614057 GGCGATACTTGGTGAAATCCAG 59.386 50.000 0.00 0.00 38.80 3.86
1793 3350 2.026729 TGGCGATACTTGGTGAAATCCA 60.027 45.455 0.00 0.00 35.49 3.41
1794 3351 2.639065 TGGCGATACTTGGTGAAATCC 58.361 47.619 0.00 0.00 0.00 3.01
1795 3352 4.900635 AATGGCGATACTTGGTGAAATC 57.099 40.909 0.00 0.00 0.00 2.17
1796 3353 6.959639 ATTAATGGCGATACTTGGTGAAAT 57.040 33.333 0.00 0.00 0.00 2.17
1797 3354 6.375736 TCAATTAATGGCGATACTTGGTGAAA 59.624 34.615 0.00 0.00 0.00 2.69
1798 3355 5.883115 TCAATTAATGGCGATACTTGGTGAA 59.117 36.000 0.00 0.00 0.00 3.18
1799 3356 5.295787 GTCAATTAATGGCGATACTTGGTGA 59.704 40.000 0.00 0.00 0.00 4.02
1800 3357 5.510671 GTCAATTAATGGCGATACTTGGTG 58.489 41.667 0.00 0.00 0.00 4.17
1801 3358 5.751243 GTCAATTAATGGCGATACTTGGT 57.249 39.130 0.00 0.00 0.00 3.67
1847 3404 9.672673 ACAAGTGAACTATCAGTAGCAATTAAT 57.327 29.630 0.00 0.00 38.29 1.40
1849 3406 9.803315 CTACAAGTGAACTATCAGTAGCAATTA 57.197 33.333 0.00 0.00 38.29 1.40
1850 3407 7.278868 GCTACAAGTGAACTATCAGTAGCAATT 59.721 37.037 20.49 2.63 46.59 2.32
1853 3410 5.651530 GCTACAAGTGAACTATCAGTAGCA 58.348 41.667 20.49 0.00 46.59 3.49
1855 3412 8.709386 ATTTGCTACAAGTGAACTATCAGTAG 57.291 34.615 0.00 0.00 38.29 2.57
1857 3414 7.390027 AGATTTGCTACAAGTGAACTATCAGT 58.610 34.615 0.00 0.00 41.05 3.41
1912 3469 6.432162 AGAAAAACAGAATTCTATGAGCAGCA 59.568 34.615 7.86 0.00 34.24 4.41
1936 3495 9.495572 ACCAGTTCTACTAAAATCAGAAAGAAG 57.504 33.333 0.00 0.00 30.50 2.85
1939 3501 9.273016 TCAACCAGTTCTACTAAAATCAGAAAG 57.727 33.333 0.00 0.00 30.50 2.62
1940 3502 9.621629 TTCAACCAGTTCTACTAAAATCAGAAA 57.378 29.630 0.00 0.00 30.50 2.52
1950 3512 8.746530 CCTAGTAACATTCAACCAGTTCTACTA 58.253 37.037 0.00 0.00 0.00 1.82
1955 3517 7.739498 TTTCCTAGTAACATTCAACCAGTTC 57.261 36.000 0.00 0.00 0.00 3.01
1991 3557 5.605564 TGAACAAATACGTCCACATCTTG 57.394 39.130 0.00 0.00 0.00 3.02
2008 3577 7.066887 ACACACTGAAATGAGTTGTAATGAACA 59.933 33.333 0.00 0.00 35.88 3.18
2011 3580 6.992123 AGACACACTGAAATGAGTTGTAATGA 59.008 34.615 0.00 0.00 0.00 2.57
2012 3581 7.194607 AGACACACTGAAATGAGTTGTAATG 57.805 36.000 0.00 0.00 0.00 1.90
2013 3582 7.807977 AAGACACACTGAAATGAGTTGTAAT 57.192 32.000 0.00 0.00 0.00 1.89
2014 3583 7.335673 TCAAAGACACACTGAAATGAGTTGTAA 59.664 33.333 0.00 0.00 0.00 2.41
2015 3584 6.821160 TCAAAGACACACTGAAATGAGTTGTA 59.179 34.615 0.00 0.00 0.00 2.41
2031 3600 4.023021 AGGACTAGAGAACGTCAAAGACAC 60.023 45.833 0.00 0.00 32.09 3.67
2042 3611 6.111669 ACTTACCCAAAAGGACTAGAGAAC 57.888 41.667 0.00 0.00 39.89 3.01
2043 3612 6.239800 GGAACTTACCCAAAAGGACTAGAGAA 60.240 42.308 0.00 0.00 39.89 2.87
2045 3614 5.489249 GGAACTTACCCAAAAGGACTAGAG 58.511 45.833 0.00 0.00 39.89 2.43
2046 3615 5.494390 GGAACTTACCCAAAAGGACTAGA 57.506 43.478 0.00 0.00 39.89 2.43
2067 3640 0.034767 TGCAGATTGCTCTGGAAGGG 60.035 55.000 5.23 0.00 45.62 3.95
2112 3685 2.094390 CACTCTTGACCATGGCAATTGG 60.094 50.000 13.04 5.58 40.26 3.16
2123 3696 4.497006 GCAATGCATCATACACTCTTGACC 60.497 45.833 0.00 0.00 0.00 4.02
2125 3698 3.628942 GGCAATGCATCATACACTCTTGA 59.371 43.478 7.79 0.00 0.00 3.02
2131 3704 4.579454 AGATTGGCAATGCATCATACAC 57.421 40.909 19.07 0.00 0.00 2.90
2162 3813 8.140112 AGTTGTAATCCAGAGAGTTGATACTT 57.860 34.615 0.00 0.00 33.84 2.24
2184 3836 6.770785 TGGCTCATACTCAACAACTAAAAGTT 59.229 34.615 0.00 0.00 39.39 2.66
2185 3837 6.296026 TGGCTCATACTCAACAACTAAAAGT 58.704 36.000 0.00 0.00 0.00 2.66
2186 3838 6.801539 TGGCTCATACTCAACAACTAAAAG 57.198 37.500 0.00 0.00 0.00 2.27
2187 3839 7.284489 ACTTTGGCTCATACTCAACAACTAAAA 59.716 33.333 0.00 0.00 0.00 1.52
2189 3841 6.296026 ACTTTGGCTCATACTCAACAACTAA 58.704 36.000 0.00 0.00 0.00 2.24
2190 3842 5.865085 ACTTTGGCTCATACTCAACAACTA 58.135 37.500 0.00 0.00 0.00 2.24
2192 3844 5.438761 AACTTTGGCTCATACTCAACAAC 57.561 39.130 0.00 0.00 0.00 3.32
2193 3845 6.995686 TCTAAACTTTGGCTCATACTCAACAA 59.004 34.615 0.00 0.00 0.00 2.83
2195 3847 7.435068 TTCTAAACTTTGGCTCATACTCAAC 57.565 36.000 0.00 0.00 0.00 3.18
2196 3848 7.174946 CCTTTCTAAACTTTGGCTCATACTCAA 59.825 37.037 0.00 0.00 0.00 3.02
2226 3927 5.501413 CGCATGTAGTGTTCAAGCTTGATAG 60.501 44.000 28.89 12.05 37.00 2.08
2235 3936 3.723260 TCTTCACGCATGTAGTGTTCAA 58.277 40.909 18.31 8.66 39.40 2.69
2236 3937 3.378911 TCTTCACGCATGTAGTGTTCA 57.621 42.857 18.31 7.51 39.40 3.18
2237 3938 3.484229 GCATCTTCACGCATGTAGTGTTC 60.484 47.826 18.31 4.60 39.40 3.18
2279 3986 9.413048 GTGCCATAATATCTTCAGTAGTTCTAC 57.587 37.037 2.14 2.14 0.00 2.59
2291 3998 5.421693 TGCCAGTTTTGTGCCATAATATCTT 59.578 36.000 0.00 0.00 0.00 2.40
2365 4091 7.554835 ACATACAGGTTTTACTGAAACTGTCAA 59.445 33.333 11.18 0.00 45.55 3.18
2404 4132 5.333513 CATTTGTGCACTGCAAACAAAAAT 58.666 33.333 19.41 9.08 41.47 1.82
2412 4140 1.069427 GGCCATTTGTGCACTGCAA 59.931 52.632 19.41 8.70 41.47 4.08
2462 4190 2.158900 ACACAAGCTGCAACTGTACTCT 60.159 45.455 1.02 0.00 0.00 3.24
2642 4373 0.178903 AGAGGCGGCAATAGGGGATA 60.179 55.000 13.08 0.00 0.00 2.59
2705 4436 0.036388 CGTATGGGACCAAGCAGTGT 60.036 55.000 0.00 0.00 0.00 3.55
2765 4496 4.794439 CGCACCGGCTCATCGTCA 62.794 66.667 0.00 0.00 38.10 4.35
3107 5426 2.037772 CCGAATTCTCCTACTGATGGGG 59.962 54.545 3.52 0.00 0.00 4.96
3114 5433 3.053544 TGGAGTCTCCGAATTCTCCTACT 60.054 47.826 14.34 2.31 44.57 2.57
3127 5447 2.485814 GCACAAACAGAATGGAGTCTCC 59.514 50.000 12.40 12.40 43.62 3.71
3153 5473 2.435586 CGGAAGGGCACAGCTGAG 60.436 66.667 23.35 14.77 0.00 3.35
3169 5489 5.241949 AGAGATAAGATAGTACCAGCAACCG 59.758 44.000 0.00 0.00 0.00 4.44
3179 5499 9.392259 TCGAAAGACAACAGAGATAAGATAGTA 57.608 33.333 0.00 0.00 33.31 1.82
3199 5519 6.743575 AATCCTATCACCAAACTTCGAAAG 57.256 37.500 0.00 0.00 0.00 2.62
3244 5570 1.969208 TGGCCATGCAAATGTCTTCAA 59.031 42.857 0.00 0.00 0.00 2.69
3251 5577 0.320858 TGTGCTTGGCCATGCAAATG 60.321 50.000 38.95 11.89 42.03 2.32
3256 5582 0.459585 CTGAATGTGCTTGGCCATGC 60.460 55.000 31.32 31.32 0.00 4.06
3257 5583 1.179152 TCTGAATGTGCTTGGCCATG 58.821 50.000 6.09 11.02 0.00 3.66
3282 5608 4.782019 AAAGCTGACAAGAACACAAACA 57.218 36.364 0.00 0.00 0.00 2.83
3388 5719 6.116126 GCACTTATTCCATGAAAGGACTACT 58.884 40.000 0.00 0.00 37.42 2.57
3389 5720 5.880332 TGCACTTATTCCATGAAAGGACTAC 59.120 40.000 0.00 0.00 37.42 2.73
3391 5722 4.922206 TGCACTTATTCCATGAAAGGACT 58.078 39.130 0.00 0.00 37.42 3.85
3392 5723 4.943705 TCTGCACTTATTCCATGAAAGGAC 59.056 41.667 0.00 0.00 37.42 3.85
3393 5724 5.178096 TCTGCACTTATTCCATGAAAGGA 57.822 39.130 0.00 0.00 35.41 3.36
3394 5725 6.461110 AATCTGCACTTATTCCATGAAAGG 57.539 37.500 0.00 0.00 0.00 3.11
3396 5727 7.039853 TGACAAATCTGCACTTATTCCATGAAA 60.040 33.333 0.00 0.00 0.00 2.69
3397 5728 6.433716 TGACAAATCTGCACTTATTCCATGAA 59.566 34.615 0.00 0.00 0.00 2.57
3398 5729 5.945191 TGACAAATCTGCACTTATTCCATGA 59.055 36.000 0.00 0.00 0.00 3.07
3399 5730 6.198650 TGACAAATCTGCACTTATTCCATG 57.801 37.500 0.00 0.00 0.00 3.66
3400 5731 5.359009 CCTGACAAATCTGCACTTATTCCAT 59.641 40.000 0.00 0.00 0.00 3.41
3401 5732 4.701651 CCTGACAAATCTGCACTTATTCCA 59.298 41.667 0.00 0.00 0.00 3.53
3402 5733 4.702131 ACCTGACAAATCTGCACTTATTCC 59.298 41.667 0.00 0.00 0.00 3.01
3403 5734 5.182001 ACACCTGACAAATCTGCACTTATTC 59.818 40.000 0.00 0.00 0.00 1.75
3404 5735 5.072741 ACACCTGACAAATCTGCACTTATT 58.927 37.500 0.00 0.00 0.00 1.40
3405 5736 4.655963 ACACCTGACAAATCTGCACTTAT 58.344 39.130 0.00 0.00 0.00 1.73
3406 5737 4.085357 ACACCTGACAAATCTGCACTTA 57.915 40.909 0.00 0.00 0.00 2.24
3407 5738 2.936202 ACACCTGACAAATCTGCACTT 58.064 42.857 0.00 0.00 0.00 3.16
3409 5740 3.374745 CAAACACCTGACAAATCTGCAC 58.625 45.455 0.00 0.00 0.00 4.57
3410 5741 2.361757 CCAAACACCTGACAAATCTGCA 59.638 45.455 0.00 0.00 0.00 4.41
3411 5742 2.362077 ACCAAACACCTGACAAATCTGC 59.638 45.455 0.00 0.00 0.00 4.26
3412 5743 4.499696 GGAACCAAACACCTGACAAATCTG 60.500 45.833 0.00 0.00 0.00 2.90
3414 5745 3.383185 TGGAACCAAACACCTGACAAATC 59.617 43.478 0.00 0.00 0.00 2.17
3415 5746 3.370104 TGGAACCAAACACCTGACAAAT 58.630 40.909 0.00 0.00 0.00 2.32
3417 5748 2.516227 TGGAACCAAACACCTGACAA 57.484 45.000 0.00 0.00 0.00 3.18
3418 5749 2.305928 CATGGAACCAAACACCTGACA 58.694 47.619 0.00 0.00 0.00 3.58
3419 5750 2.034558 CACATGGAACCAAACACCTGAC 59.965 50.000 0.00 0.00 0.00 3.51
3420 5751 2.305928 CACATGGAACCAAACACCTGA 58.694 47.619 0.00 0.00 0.00 3.86
3421 5752 1.269726 GCACATGGAACCAAACACCTG 60.270 52.381 0.00 0.00 0.00 4.00
3422 5753 1.039856 GCACATGGAACCAAACACCT 58.960 50.000 0.00 0.00 0.00 4.00
3423 5754 0.749649 TGCACATGGAACCAAACACC 59.250 50.000 0.00 0.00 0.00 4.16
3424 5755 1.408702 AGTGCACATGGAACCAAACAC 59.591 47.619 21.04 4.57 0.00 3.32
3427 5758 2.665165 AGAAGTGCACATGGAACCAAA 58.335 42.857 21.04 0.00 0.00 3.28
3429 5760 2.363306 AAGAAGTGCACATGGAACCA 57.637 45.000 21.04 0.00 0.00 3.67
3430 5761 3.733443 AAAAGAAGTGCACATGGAACC 57.267 42.857 21.04 0.00 0.00 3.62
3431 5762 5.863935 GGATAAAAAGAAGTGCACATGGAAC 59.136 40.000 21.04 3.41 0.00 3.62
3433 5764 4.155826 CGGATAAAAAGAAGTGCACATGGA 59.844 41.667 21.04 0.00 0.00 3.41
3434 5765 4.155826 TCGGATAAAAAGAAGTGCACATGG 59.844 41.667 21.04 0.00 0.00 3.66
3435 5766 5.088739 GTCGGATAAAAAGAAGTGCACATG 58.911 41.667 21.04 0.00 0.00 3.21
3436 5767 4.759693 TGTCGGATAAAAAGAAGTGCACAT 59.240 37.500 21.04 7.05 0.00 3.21
3437 5768 4.130857 TGTCGGATAAAAAGAAGTGCACA 58.869 39.130 21.04 0.00 0.00 4.57
3442 5773 5.365619 ACACACTGTCGGATAAAAAGAAGT 58.634 37.500 0.00 0.00 0.00 3.01
3443 5774 5.924475 ACACACTGTCGGATAAAAAGAAG 57.076 39.130 0.00 0.00 0.00 2.85
3444 5775 6.491394 CAAACACACTGTCGGATAAAAAGAA 58.509 36.000 0.00 0.00 0.00 2.52
3445 5776 5.504994 GCAAACACACTGTCGGATAAAAAGA 60.505 40.000 0.00 0.00 0.00 2.52
3447 5778 4.602995 GCAAACACACTGTCGGATAAAAA 58.397 39.130 0.00 0.00 0.00 1.94
3448 5779 3.303461 CGCAAACACACTGTCGGATAAAA 60.303 43.478 0.00 0.00 0.00 1.52
3449 5780 2.222213 CGCAAACACACTGTCGGATAAA 59.778 45.455 0.00 0.00 0.00 1.40
3450 5781 1.795872 CGCAAACACACTGTCGGATAA 59.204 47.619 0.00 0.00 0.00 1.75
3451 5782 1.424403 CGCAAACACACTGTCGGATA 58.576 50.000 0.00 0.00 0.00 2.59
3452 5783 1.227999 CCGCAAACACACTGTCGGAT 61.228 55.000 0.93 0.00 36.32 4.18
3453 5784 1.885388 CCGCAAACACACTGTCGGA 60.885 57.895 0.93 0.00 36.32 4.55
3454 5785 1.711060 AACCGCAAACACACTGTCGG 61.711 55.000 5.03 5.03 38.55 4.79
3455 5786 0.098025 AAACCGCAAACACACTGTCG 59.902 50.000 0.00 0.00 0.00 4.35
3456 5787 2.271821 AAAACCGCAAACACACTGTC 57.728 45.000 0.00 0.00 0.00 3.51
3458 5789 2.851824 GAGAAAAACCGCAAACACACTG 59.148 45.455 0.00 0.00 0.00 3.66
3459 5790 2.752903 AGAGAAAAACCGCAAACACACT 59.247 40.909 0.00 0.00 0.00 3.55
3461 5792 6.607689 CATATAGAGAAAAACCGCAAACACA 58.392 36.000 0.00 0.00 0.00 3.72
3462 5793 5.511729 GCATATAGAGAAAAACCGCAAACAC 59.488 40.000 0.00 0.00 0.00 3.32
3463 5794 5.182190 TGCATATAGAGAAAAACCGCAAACA 59.818 36.000 0.00 0.00 0.00 2.83
3464 5795 5.636837 TGCATATAGAGAAAAACCGCAAAC 58.363 37.500 0.00 0.00 0.00 2.93
3465 5796 5.888691 TGCATATAGAGAAAAACCGCAAA 57.111 34.783 0.00 0.00 0.00 3.68
3466 5797 5.414454 AGTTGCATATAGAGAAAAACCGCAA 59.586 36.000 0.00 0.00 34.72 4.85
3468 5799 5.485662 AGTTGCATATAGAGAAAAACCGC 57.514 39.130 0.00 0.00 0.00 5.68
3486 5817 7.300320 ACGATAAATACATGCATGCATAGTTG 58.700 34.615 31.73 23.18 34.91 3.16
3487 5818 7.439157 ACGATAAATACATGCATGCATAGTT 57.561 32.000 31.73 23.59 34.91 2.24
3489 5820 9.481800 CTTAACGATAAATACATGCATGCATAG 57.518 33.333 31.73 25.51 34.91 2.23
3490 5821 7.962373 GCTTAACGATAAATACATGCATGCATA 59.038 33.333 31.73 18.79 34.91 3.14
3491 5822 6.803320 GCTTAACGATAAATACATGCATGCAT 59.197 34.615 27.46 27.46 37.08 3.96
3492 5823 6.017192 AGCTTAACGATAAATACATGCATGCA 60.017 34.615 26.53 25.04 0.00 3.96
3493 5824 6.373779 AGCTTAACGATAAATACATGCATGC 58.626 36.000 26.53 11.82 0.00 4.06
3494 5825 8.786937 AAAGCTTAACGATAAATACATGCATG 57.213 30.769 25.09 25.09 0.00 4.06
3495 5826 9.236691 CAAAAGCTTAACGATAAATACATGCAT 57.763 29.630 0.00 0.00 0.00 3.96
3496 5827 8.454894 TCAAAAGCTTAACGATAAATACATGCA 58.545 29.630 0.00 0.00 0.00 3.96
3497 5828 8.835467 TCAAAAGCTTAACGATAAATACATGC 57.165 30.769 0.00 0.00 0.00 4.06
3498 5829 8.947940 GCTCAAAAGCTTAACGATAAATACATG 58.052 33.333 0.00 0.00 45.55 3.21
3538 6242 7.027778 ACCAACTCAACTCACAAGAATTAAC 57.972 36.000 0.00 0.00 0.00 2.01
3543 6247 4.843728 AGAACCAACTCAACTCACAAGAA 58.156 39.130 0.00 0.00 0.00 2.52
3544 6248 4.487714 AGAACCAACTCAACTCACAAGA 57.512 40.909 0.00 0.00 0.00 3.02
3587 6331 7.297936 TGAGTAAATTCAGGACAGTTGTCTA 57.702 36.000 11.67 0.00 44.20 2.59
3593 6337 5.930135 AGTGTTGAGTAAATTCAGGACAGT 58.070 37.500 0.00 0.00 0.00 3.55
3601 6345 5.917541 TGTTCCGAGTGTTGAGTAAATTC 57.082 39.130 0.00 0.00 0.00 2.17
3617 6361 0.806868 AGCTGCAATGTGATGTTCCG 59.193 50.000 1.02 0.00 0.00 4.30
3624 6368 3.465990 GCTCCTAGCTGCAATGTGA 57.534 52.632 1.02 0.00 38.45 3.58
3640 6384 1.004044 ACTGAAATAGTGCCAGCAGCT 59.996 47.619 0.00 0.00 44.23 4.24
3659 6417 2.094338 AGTCGTACCGAATTTGAGGGAC 60.094 50.000 0.00 0.00 37.72 4.46
3666 6424 2.288395 ACCGAACAGTCGTACCGAATTT 60.288 45.455 0.00 0.00 46.21 1.82
3673 6431 2.419324 AGAGATGACCGAACAGTCGTAC 59.581 50.000 0.00 0.00 46.21 3.67
3674 6432 2.708051 AGAGATGACCGAACAGTCGTA 58.292 47.619 0.00 0.00 46.21 3.43
3677 6435 4.436242 TTGTAGAGATGACCGAACAGTC 57.564 45.455 0.00 0.00 37.28 3.51
3679 6437 5.255710 AGATTGTAGAGATGACCGAACAG 57.744 43.478 0.00 0.00 0.00 3.16
3686 6444 7.708322 TGATGCTAACAAGATTGTAGAGATGAC 59.292 37.037 10.28 2.21 41.31 3.06
3690 6448 7.924947 CAGATGATGCTAACAAGATTGTAGAGA 59.075 37.037 10.28 0.05 41.31 3.10
3691 6449 7.171167 CCAGATGATGCTAACAAGATTGTAGAG 59.829 40.741 0.00 1.48 41.31 2.43
3693 6451 6.765036 ACCAGATGATGCTAACAAGATTGTAG 59.235 38.462 0.00 0.00 41.31 2.74
3694 6452 6.653020 ACCAGATGATGCTAACAAGATTGTA 58.347 36.000 0.00 0.00 41.31 2.41
3695 6453 5.503927 ACCAGATGATGCTAACAAGATTGT 58.496 37.500 0.00 0.00 44.72 2.71
3698 6456 5.748402 TCAACCAGATGATGCTAACAAGAT 58.252 37.500 0.00 0.00 0.00 2.40
3699 6457 5.164620 TCAACCAGATGATGCTAACAAGA 57.835 39.130 0.00 0.00 0.00 3.02
3700 6458 5.634896 GTTCAACCAGATGATGCTAACAAG 58.365 41.667 0.00 0.00 0.00 3.16
3701 6459 4.154015 CGTTCAACCAGATGATGCTAACAA 59.846 41.667 0.00 0.00 0.00 2.83
3703 6461 3.932710 TCGTTCAACCAGATGATGCTAAC 59.067 43.478 0.00 0.00 0.00 2.34
3717 6480 6.831769 TGATGCTAAGAAGAAATCGTTCAAC 58.168 36.000 0.00 0.00 36.09 3.18
3745 6508 2.621998 CAGAAACATCAGATGGGCATCC 59.378 50.000 15.13 0.00 38.58 3.51
3746 6509 2.034305 GCAGAAACATCAGATGGGCATC 59.966 50.000 15.13 7.04 38.09 3.91
3747 6510 2.029623 GCAGAAACATCAGATGGGCAT 58.970 47.619 15.13 0.00 33.60 4.40
3750 6513 1.396653 GGGCAGAAACATCAGATGGG 58.603 55.000 15.13 0.46 33.60 4.00
3768 6531 4.908687 TTGGGCGCGATCGATGGG 62.909 66.667 21.57 5.40 38.10 4.00
3797 6560 4.699637 TGCTCTTCTTGTCGGAGTAAAAA 58.300 39.130 0.00 0.00 0.00 1.94
3798 6561 4.330944 TGCTCTTCTTGTCGGAGTAAAA 57.669 40.909 0.00 0.00 0.00 1.52
3799 6562 4.330944 TTGCTCTTCTTGTCGGAGTAAA 57.669 40.909 0.00 0.00 31.06 2.01
3800 6563 4.330944 TTTGCTCTTCTTGTCGGAGTAA 57.669 40.909 0.00 0.00 31.85 2.24
3801 6564 4.330944 TTTTGCTCTTCTTGTCGGAGTA 57.669 40.909 0.00 0.00 0.00 2.59
3802 6565 2.910688 TTTGCTCTTCTTGTCGGAGT 57.089 45.000 0.00 0.00 0.00 3.85
3806 6569 4.027377 GCTTTGTTTTTGCTCTTCTTGTCG 60.027 41.667 0.00 0.00 0.00 4.35
3807 6570 5.105063 AGCTTTGTTTTTGCTCTTCTTGTC 58.895 37.500 0.00 0.00 30.41 3.18
3817 6580 5.294060 TCTCAAATTGGAGCTTTGTTTTTGC 59.706 36.000 4.82 0.00 35.56 3.68
3818 6581 6.907206 TCTCAAATTGGAGCTTTGTTTTTG 57.093 33.333 4.82 0.00 35.56 2.44
3824 7852 4.022589 TCTGCTTCTCAAATTGGAGCTTTG 60.023 41.667 4.82 0.00 34.84 2.77
3872 7900 0.543749 CACCTCCAGGGAGATCCAAC 59.456 60.000 16.89 0.00 44.53 3.77
3874 7902 0.644380 ATCACCTCCAGGGAGATCCA 59.356 55.000 16.89 0.00 40.57 3.41
3877 7905 0.344790 ACCATCACCTCCAGGGAGAT 59.655 55.000 16.89 0.00 44.35 2.75
3878 7906 0.618680 CACCATCACCTCCAGGGAGA 60.619 60.000 16.89 0.00 44.53 3.71
3879 7907 1.630126 CCACCATCACCTCCAGGGAG 61.630 65.000 8.41 8.41 41.63 4.30
3882 7910 3.001514 CCCACCATCACCTCCAGG 58.998 66.667 0.00 0.00 42.17 4.45
3883 7911 1.856539 AAGCCCACCATCACCTCCAG 61.857 60.000 0.00 0.00 0.00 3.86
3884 7912 1.852157 AAGCCCACCATCACCTCCA 60.852 57.895 0.00 0.00 0.00 3.86
3885 7913 1.077429 GAAGCCCACCATCACCTCC 60.077 63.158 0.00 0.00 0.00 4.30
3886 7914 0.329596 AAGAAGCCCACCATCACCTC 59.670 55.000 0.00 0.00 0.00 3.85
3887 7915 0.038744 CAAGAAGCCCACCATCACCT 59.961 55.000 0.00 0.00 0.00 4.00
3888 7916 1.598701 GCAAGAAGCCCACCATCACC 61.599 60.000 0.00 0.00 37.23 4.02
3889 7917 1.885871 GCAAGAAGCCCACCATCAC 59.114 57.895 0.00 0.00 37.23 3.06
3900 7928 0.605319 TTGCCCGGTACAGCAAGAAG 60.605 55.000 11.25 0.00 41.36 2.85
3901 7929 1.452368 TTGCCCGGTACAGCAAGAA 59.548 52.632 11.25 0.00 41.36 2.52
3902 7930 3.152865 TTGCCCGGTACAGCAAGA 58.847 55.556 11.25 0.00 41.36 3.02
3904 7932 2.671619 GCTTGCCCGGTACAGCAA 60.672 61.111 14.05 14.05 43.48 3.91
3905 7933 3.190738 AAGCTTGCCCGGTACAGCA 62.191 57.895 16.02 8.68 35.39 4.41
3906 7934 2.359975 AAGCTTGCCCGGTACAGC 60.360 61.111 0.00 4.10 0.00 4.40
3907 7935 2.040544 CCAAGCTTGCCCGGTACAG 61.041 63.158 21.43 0.00 0.00 2.74
3908 7936 2.033448 CCAAGCTTGCCCGGTACA 59.967 61.111 21.43 0.00 0.00 2.90
3909 7937 3.440415 GCCAAGCTTGCCCGGTAC 61.440 66.667 21.43 0.12 0.00 3.34
3917 7945 3.121030 CCGAGTCCGCCAAGCTTG 61.121 66.667 19.93 19.93 0.00 4.01
3948 7976 2.996621 CTCCTTCACCAACGACATCTTC 59.003 50.000 0.00 0.00 0.00 2.87
3949 7977 2.368875 ACTCCTTCACCAACGACATCTT 59.631 45.455 0.00 0.00 0.00 2.40
3950 7978 1.971357 ACTCCTTCACCAACGACATCT 59.029 47.619 0.00 0.00 0.00 2.90
3951 7979 2.457366 ACTCCTTCACCAACGACATC 57.543 50.000 0.00 0.00 0.00 3.06
3952 7980 2.104111 TGAACTCCTTCACCAACGACAT 59.896 45.455 0.00 0.00 31.00 3.06
3953 7981 1.483004 TGAACTCCTTCACCAACGACA 59.517 47.619 0.00 0.00 31.00 4.35
3956 7984 2.766313 TCATGAACTCCTTCACCAACG 58.234 47.619 0.00 0.00 39.28 4.10
3957 7985 3.441572 CCATCATGAACTCCTTCACCAAC 59.558 47.826 0.00 0.00 39.28 3.77
3958 7986 3.561960 CCCATCATGAACTCCTTCACCAA 60.562 47.826 0.00 0.00 39.28 3.67
3959 7987 2.025981 CCCATCATGAACTCCTTCACCA 60.026 50.000 0.00 0.00 39.28 4.17
3960 7988 2.648059 CCCATCATGAACTCCTTCACC 58.352 52.381 0.00 0.00 39.28 4.02
3961 7989 2.019984 GCCCATCATGAACTCCTTCAC 58.980 52.381 0.00 0.00 39.28 3.18
3962 7990 1.634973 TGCCCATCATGAACTCCTTCA 59.365 47.619 0.00 0.00 40.77 3.02
3980 8008 0.822532 CATCTCCTCCAAGGCCATGC 60.823 60.000 5.01 0.00 34.61 4.06
3982 8010 1.535685 GCATCTCCTCCAAGGCCAT 59.464 57.895 5.01 0.00 34.61 4.40
3984 8012 2.194326 GGCATCTCCTCCAAGGCC 59.806 66.667 0.00 0.00 34.61 5.19
3985 8013 2.004408 ATGGGCATCTCCTCCAAGGC 62.004 60.000 0.00 0.00 34.61 4.35
3986 8014 0.110104 GATGGGCATCTCCTCCAAGG 59.890 60.000 0.00 0.00 36.46 3.61
3987 8015 1.138568 AGATGGGCATCTCCTCCAAG 58.861 55.000 0.00 0.00 44.37 3.61
3988 8016 3.347158 AGATGGGCATCTCCTCCAA 57.653 52.632 0.00 0.00 44.37 3.53
4001 8029 3.402681 AGGTGCACCCGGAGATGG 61.403 66.667 32.29 0.00 38.74 3.51
4003 8031 4.101448 GCAGGTGCACCCGGAGAT 62.101 66.667 32.29 10.03 41.59 2.75
4005 8033 4.335647 AAGCAGGTGCACCCGGAG 62.336 66.667 32.29 19.90 45.16 4.63
4021 9044 4.473643 CCTGTTCAAGGTGCCGAA 57.526 55.556 0.00 0.00 41.74 4.30
4037 9060 3.837355 TCCGGGTAACTTAGGATCTACC 58.163 50.000 0.00 0.00 39.35 3.18
4039 9062 6.460103 AGTATCCGGGTAACTTAGGATCTA 57.540 41.667 0.00 0.00 41.72 1.98
4045 9068 6.461110 TTCAGAAGTATCCGGGTAACTTAG 57.539 41.667 14.38 11.20 33.72 2.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.