Multiple sequence alignment - TraesCS3A01G022300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G022300 chr3A 100.000 3780 0 0 1 3780 12732117 12728338 0.000000e+00 6981.0
1 TraesCS3A01G022300 chr3B 90.355 2509 149 38 577 3030 10046290 10048760 0.000000e+00 3206.0
2 TraesCS3A01G022300 chr3B 87.209 516 18 12 6 506 10045775 10046257 9.230000e-151 544.0
3 TraesCS3A01G022300 chr3B 91.282 195 16 1 3084 3277 10054048 10054242 8.050000e-67 265.0
4 TraesCS3A01G022300 chr3D 92.469 2191 117 24 693 2848 8146427 8148604 0.000000e+00 3088.0
5 TraesCS3A01G022300 chr3D 89.247 1832 145 22 1043 2846 7997951 7999758 0.000000e+00 2244.0
6 TraesCS3A01G022300 chr3D 91.076 706 50 8 2144 2846 8068441 8069136 0.000000e+00 942.0
7 TraesCS3A01G022300 chr3D 86.211 921 58 23 8 902 7977222 7978099 0.000000e+00 933.0
8 TraesCS3A01G022300 chr3D 88.384 396 28 9 2858 3242 8000499 8000887 9.570000e-126 460.0
9 TraesCS3A01G022300 chr3D 92.647 68 4 1 915 982 7997867 7997933 3.110000e-16 97.1
10 TraesCS3A01G022300 chr7A 91.793 463 28 3 3326 3778 674503455 674503917 1.480000e-178 636.0
11 TraesCS3A01G022300 chr7A 74.123 1055 240 27 920 1957 101278487 101277449 4.550000e-109 405.0
12 TraesCS3A01G022300 chr5D 90.833 480 33 4 3309 3778 495365123 495364645 1.920000e-177 632.0
13 TraesCS3A01G022300 chr7D 90.021 471 34 9 3318 3778 553483265 553483732 6.990000e-167 597.0
14 TraesCS3A01G022300 chr7D 89.744 468 33 4 3326 3778 62164859 62165326 5.440000e-163 584.0
15 TraesCS3A01G022300 chr2D 89.684 475 32 6 3319 3778 27604059 27604531 1.170000e-164 590.0
16 TraesCS3A01G022300 chr4D 88.486 469 35 10 3327 3778 489337851 489337385 1.980000e-152 549.0
17 TraesCS3A01G022300 chr4D 88.043 460 32 4 3327 3778 151985530 151985974 1.200000e-144 523.0
18 TraesCS3A01G022300 chr2A 88.462 468 35 9 3327 3778 690527552 690528016 7.140000e-152 547.0
19 TraesCS3A01G022300 chr2A 76.380 978 200 25 995 1957 128481563 128480602 7.290000e-137 497.0
20 TraesCS3A01G022300 chr4A 87.815 476 42 8 3318 3778 21031205 21031679 9.230000e-151 544.0
21 TraesCS3A01G022300 chr1D 87.708 480 40 12 3317 3778 89230864 89231342 3.320000e-150 542.0
22 TraesCS3A01G022300 chr7B 74.359 975 228 17 996 1957 54503353 54502388 2.740000e-106 396.0
23 TraesCS3A01G022300 chr2B 72.915 971 215 33 998 1955 176273467 176272532 3.690000e-75 292.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G022300 chr3A 12728338 12732117 3779 True 6981.0 6981 100.000000 1 3780 1 chr3A.!!$R1 3779
1 TraesCS3A01G022300 chr3B 10045775 10048760 2985 False 1875.0 3206 88.782000 6 3030 2 chr3B.!!$F2 3024
2 TraesCS3A01G022300 chr3D 8146427 8148604 2177 False 3088.0 3088 92.469000 693 2848 1 chr3D.!!$F3 2155
3 TraesCS3A01G022300 chr3D 8068441 8069136 695 False 942.0 942 91.076000 2144 2846 1 chr3D.!!$F2 702
4 TraesCS3A01G022300 chr3D 7997867 8000887 3020 False 933.7 2244 90.092667 915 3242 3 chr3D.!!$F4 2327
5 TraesCS3A01G022300 chr3D 7977222 7978099 877 False 933.0 933 86.211000 8 902 1 chr3D.!!$F1 894
6 TraesCS3A01G022300 chr7A 101277449 101278487 1038 True 405.0 405 74.123000 920 1957 1 chr7A.!!$R1 1037
7 TraesCS3A01G022300 chr2A 128480602 128481563 961 True 497.0 497 76.380000 995 1957 1 chr2A.!!$R1 962
8 TraesCS3A01G022300 chr7B 54502388 54503353 965 True 396.0 396 74.359000 996 1957 1 chr7B.!!$R1 961
9 TraesCS3A01G022300 chr2B 176272532 176273467 935 True 292.0 292 72.915000 998 1955 1 chr2B.!!$R1 957

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
719 767 0.107017 ACCTTGCCCATGGAGAATCG 60.107 55.0 15.22 0.0 34.37 3.34 F
825 886 0.238289 CCAGTGCAAGCGAAAACGAT 59.762 50.0 0.00 0.0 0.00 3.73 F
1151 1218 0.465705 GGGGATGCTGTGAAGATCGA 59.534 55.0 0.00 0.0 0.00 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 1640 1.139058 GATAGGGCAGGAGAAGCGAAA 59.861 52.381 0.00 0.0 0.0 3.46 R
2260 2390 2.540383 TGGCCTATATAGCTGTCTGGG 58.460 52.381 3.32 0.0 0.0 4.45 R
3082 3959 0.330604 AATGAGCAGTCCCAGCATGT 59.669 50.000 0.00 0.0 0.0 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 122 4.603535 AGCAACGCCTGGGCCTTT 62.604 61.111 4.53 0.00 37.98 3.11
119 124 2.650778 CAACGCCTGGGCCTTTTC 59.349 61.111 4.53 0.00 37.98 2.29
120 125 1.903404 CAACGCCTGGGCCTTTTCT 60.903 57.895 4.53 0.00 37.98 2.52
121 126 1.152546 AACGCCTGGGCCTTTTCTT 60.153 52.632 4.53 0.00 37.98 2.52
122 127 0.111639 AACGCCTGGGCCTTTTCTTA 59.888 50.000 4.53 0.00 37.98 2.10
123 128 0.322546 ACGCCTGGGCCTTTTCTTAG 60.323 55.000 4.53 0.00 37.98 2.18
132 137 0.989890 CCTTTTCTTAGTCGCGACCG 59.010 55.000 34.08 22.51 0.00 4.79
156 161 3.057315 CCGTCATTGGCTGTCTTTCAAAT 60.057 43.478 0.00 0.00 0.00 2.32
164 169 4.042809 TGGCTGTCTTTCAAATAAGGAGGA 59.957 41.667 0.00 0.00 0.00 3.71
170 175 4.695455 TCTTTCAAATAAGGAGGACAAGCG 59.305 41.667 0.00 0.00 0.00 4.68
229 238 6.403636 GCTTTGAACCAAACAGATCACGATAT 60.404 38.462 0.00 0.00 0.00 1.63
230 239 6.662414 TTGAACCAAACAGATCACGATATC 57.338 37.500 0.00 0.00 0.00 1.63
231 240 5.729510 TGAACCAAACAGATCACGATATCA 58.270 37.500 3.12 0.00 0.00 2.15
232 241 6.169800 TGAACCAAACAGATCACGATATCAA 58.830 36.000 3.12 0.00 0.00 2.57
233 242 6.652900 TGAACCAAACAGATCACGATATCAAA 59.347 34.615 3.12 0.00 0.00 2.69
234 243 6.668541 ACCAAACAGATCACGATATCAAAG 57.331 37.500 3.12 0.00 0.00 2.77
235 244 6.173339 ACCAAACAGATCACGATATCAAAGT 58.827 36.000 3.12 0.00 0.00 2.66
308 317 4.340097 TGATCTGATTCATTCATGCCCAAC 59.660 41.667 0.00 0.00 32.72 3.77
331 340 2.580815 CGTGCAGGAGGCTGATCA 59.419 61.111 0.00 0.00 45.15 2.92
506 539 2.474816 CCGCCTGTCTCAATAAGTAGC 58.525 52.381 0.00 0.00 0.00 3.58
511 544 5.509840 CGCCTGTCTCAATAAGTAGCCTATT 60.510 44.000 0.00 0.00 0.00 1.73
512 545 5.698545 GCCTGTCTCAATAAGTAGCCTATTG 59.301 44.000 0.00 0.00 33.73 1.90
516 549 8.762481 TGTCTCAATAAGTAGCCTATTGACTA 57.238 34.615 2.00 0.00 35.88 2.59
517 550 8.630917 TGTCTCAATAAGTAGCCTATTGACTAC 58.369 37.037 2.00 0.00 39.25 2.73
518 551 8.630917 GTCTCAATAAGTAGCCTATTGACTACA 58.369 37.037 3.77 0.00 41.01 2.74
519 552 9.197306 TCTCAATAAGTAGCCTATTGACTACAA 57.803 33.333 3.77 0.00 41.01 2.41
521 554 8.978472 TCAATAAGTAGCCTATTGACTACAAGT 58.022 33.333 3.77 0.00 41.01 3.16
562 599 1.187567 TACTCCAGACAGCAGCTGCA 61.188 55.000 38.24 16.57 45.16 4.41
563 600 1.302271 CTCCAGACAGCAGCTGCAA 60.302 57.895 38.24 14.29 45.16 4.08
564 601 1.575576 CTCCAGACAGCAGCTGCAAC 61.576 60.000 38.24 26.84 45.16 4.17
565 602 2.623915 CCAGACAGCAGCTGCAACC 61.624 63.158 38.24 25.12 45.16 3.77
566 603 1.600076 CAGACAGCAGCTGCAACCT 60.600 57.895 38.24 26.78 45.16 3.50
567 604 1.600076 AGACAGCAGCTGCAACCTG 60.600 57.895 38.24 28.83 45.16 4.00
620 660 3.055602 ACACCGTAAGTTCATACCCCTTC 60.056 47.826 0.00 0.00 0.00 3.46
630 670 2.239654 TCATACCCCTTCTGCCTTCTTG 59.760 50.000 0.00 0.00 0.00 3.02
633 673 2.062636 ACCCCTTCTGCCTTCTTGTTA 58.937 47.619 0.00 0.00 0.00 2.41
676 724 9.663365 AAGTAGGCCTTCTAATCTTTAGTAGAT 57.337 33.333 12.58 0.00 45.70 1.98
718 766 1.064463 TCACCTTGCCCATGGAGAATC 60.064 52.381 15.22 0.00 0.00 2.52
719 767 0.107017 ACCTTGCCCATGGAGAATCG 60.107 55.000 15.22 0.00 34.37 3.34
721 769 1.140852 CCTTGCCCATGGAGAATCGTA 59.859 52.381 15.22 0.00 34.37 3.43
722 770 2.421388 CCTTGCCCATGGAGAATCGTAA 60.421 50.000 15.22 0.00 34.37 3.18
723 771 2.325583 TGCCCATGGAGAATCGTAAC 57.674 50.000 15.22 0.00 34.37 2.50
724 772 1.557371 TGCCCATGGAGAATCGTAACA 59.443 47.619 15.22 0.00 34.37 2.41
725 773 2.026729 TGCCCATGGAGAATCGTAACAA 60.027 45.455 15.22 0.00 34.37 2.83
726 774 2.614057 GCCCATGGAGAATCGTAACAAG 59.386 50.000 15.22 0.00 34.37 3.16
727 775 3.681594 GCCCATGGAGAATCGTAACAAGA 60.682 47.826 15.22 0.00 34.37 3.02
728 776 4.513442 CCCATGGAGAATCGTAACAAGAA 58.487 43.478 15.22 0.00 34.37 2.52
770 828 9.819267 GTAGCTGTTTTGATCCTACTAGTTTAT 57.181 33.333 0.00 0.00 0.00 1.40
789 847 8.211116 AGTTTATCTCTCTTTTGCAGATCATG 57.789 34.615 0.00 0.00 0.00 3.07
807 865 5.465532 TCATGAGAGATGAAGATAGCACC 57.534 43.478 0.00 0.00 0.00 5.01
825 886 0.238289 CCAGTGCAAGCGAAAACGAT 59.762 50.000 0.00 0.00 0.00 3.73
872 933 5.422331 ACCATCTTCTACTCAAAATCCTCGA 59.578 40.000 0.00 0.00 0.00 4.04
873 934 6.070767 ACCATCTTCTACTCAAAATCCTCGAA 60.071 38.462 0.00 0.00 0.00 3.71
874 935 6.989169 CCATCTTCTACTCAAAATCCTCGAAT 59.011 38.462 0.00 0.00 0.00 3.34
987 1048 1.291877 CCGAAGACTTTCCAGGCACG 61.292 60.000 0.00 0.00 32.24 5.34
993 1057 1.966451 CTTTCCAGGCACGGTGGAC 60.966 63.158 10.60 0.00 44.06 4.02
1005 1069 2.168521 CACGGTGGACCAGATAATGACT 59.831 50.000 0.00 0.00 35.14 3.41
1128 1195 1.227674 GTCCTCCATCGGTCATGCC 60.228 63.158 0.00 0.00 0.00 4.40
1151 1218 0.465705 GGGGATGCTGTGAAGATCGA 59.534 55.000 0.00 0.00 0.00 3.59
1260 1327 1.325476 CCTTCTTCCATGCTTGCCCC 61.325 60.000 0.00 0.00 0.00 5.80
1442 1509 2.796383 CGGAGCTCATAGGACTTGAACG 60.796 54.545 17.19 0.68 0.00 3.95
1454 1521 4.022589 AGGACTTGAACGTATCGACTTTGA 60.023 41.667 0.00 0.00 0.00 2.69
1486 1553 3.198853 AGTTGAACTAATCTCTGCCCCTC 59.801 47.826 0.00 0.00 0.00 4.30
1572 1640 6.678547 TGTCCCCCAGCTTGTTAAATTATAT 58.321 36.000 0.00 0.00 0.00 0.86
1665 1733 5.747197 CCTGTCAATGCTGCATCTAAATTTC 59.253 40.000 16.55 2.32 0.00 2.17
1943 2046 8.316214 TGGAGAACTTTTATGTAAGTCCGTTAT 58.684 33.333 0.00 0.00 37.37 1.89
1995 2098 7.341445 TGGCCTGGATATAATTTGTTTGTAC 57.659 36.000 3.32 0.00 0.00 2.90
2054 2157 7.334421 ACATGTCTGTTTAAGTGTGTGATATCC 59.666 37.037 0.00 0.00 28.70 2.59
2219 2348 8.274322 TGTGAGGTATAATCTCATGTTGGATTT 58.726 33.333 13.24 7.24 42.36 2.17
2254 2384 5.841957 AGGGAATCCTCAAAAATCATTCG 57.158 39.130 0.00 0.00 39.80 3.34
2260 2390 7.062255 GGAATCCTCAAAAATCATTCGTTTGTC 59.938 37.037 0.00 0.00 34.55 3.18
2299 2431 4.321974 GGCCATTCCAAAAACTAGTCCAAG 60.322 45.833 0.00 0.00 34.01 3.61
2362 2497 9.760660 GATGTATTGACTCTTGTTATTGTTGTC 57.239 33.333 0.00 0.00 0.00 3.18
2363 2498 8.669946 TGTATTGACTCTTGTTATTGTTGTCA 57.330 30.769 0.00 0.00 0.00 3.58
2404 2539 7.897575 TTAATATCAAAACCAATGCCAACAC 57.102 32.000 0.00 0.00 0.00 3.32
2410 2545 5.988561 TCAAAACCAATGCCAACACTTAATC 59.011 36.000 0.00 0.00 0.00 1.75
2417 2552 7.613801 ACCAATGCCAACACTTAATCTAATGTA 59.386 33.333 0.00 0.00 0.00 2.29
2418 2553 8.632679 CCAATGCCAACACTTAATCTAATGTAT 58.367 33.333 0.00 0.00 0.00 2.29
2473 2608 5.641209 GCATTCATGTGAACTCAGTAAGACT 59.359 40.000 0.00 0.00 36.80 3.24
2575 2711 7.230712 GTGATGAAAGGTTTTAAGGAGGAAGAA 59.769 37.037 0.00 0.00 0.00 2.52
2607 2743 7.320443 TGAATTATGTAAGACTTGTCATGGC 57.680 36.000 14.04 0.00 0.00 4.40
2869 3735 2.728007 AGAATAAAAGACCCTGGCAGC 58.272 47.619 9.56 0.00 0.00 5.25
2952 3818 2.427232 AATTATGATGCATGCACCGC 57.573 45.000 25.37 15.90 0.00 5.68
2980 3850 7.586747 ACGTTTCTGTTTTACTTTGAAGTTGA 58.413 30.769 1.20 0.00 40.37 3.18
3076 3953 6.649141 TGTGTAATTCTCGTTTAGTTCATGCT 59.351 34.615 0.00 0.00 0.00 3.79
3082 3959 2.076100 CGTTTAGTTCATGCTGAGCCA 58.924 47.619 0.23 0.00 0.00 4.75
3109 3986 4.774124 CTGGGACTGCTCATTTTCTATCA 58.226 43.478 0.00 0.00 0.00 2.15
3110 3987 4.774124 TGGGACTGCTCATTTTCTATCAG 58.226 43.478 0.00 0.00 0.00 2.90
3134 4011 3.599343 TCACTCATGCTCGCTTTGTTAT 58.401 40.909 0.00 0.00 0.00 1.89
3175 4052 7.812191 TGTTTCATAGTTATTTTGCATGGTGAC 59.188 33.333 0.00 0.00 0.00 3.67
3178 4055 1.910819 GTTATTTTGCATGGTGACGCG 59.089 47.619 3.53 3.53 0.00 6.01
3184 4061 3.190849 CATGGTGACGCGAGCCTG 61.191 66.667 15.93 0.00 0.00 4.85
3188 4069 2.494918 GTGACGCGAGCCTGGTAT 59.505 61.111 15.93 0.00 0.00 2.73
3201 4082 3.073062 AGCCTGGTATTGTACATCCCATC 59.927 47.826 0.00 0.00 0.00 3.51
3211 4092 2.814805 ACATCCCATCTGGTCAAAGG 57.185 50.000 0.00 0.00 34.77 3.11
3242 4123 0.877071 CGCCTAATGTGCATGATCCC 59.123 55.000 0.00 0.00 0.00 3.85
3243 4124 1.251251 GCCTAATGTGCATGATCCCC 58.749 55.000 0.00 0.00 0.00 4.81
3244 4125 1.479205 GCCTAATGTGCATGATCCCCA 60.479 52.381 0.00 0.00 0.00 4.96
3245 4126 2.948115 CCTAATGTGCATGATCCCCAA 58.052 47.619 0.00 0.00 0.00 4.12
3246 4127 2.889045 CCTAATGTGCATGATCCCCAAG 59.111 50.000 0.00 0.00 0.00 3.61
3247 4128 1.117150 AATGTGCATGATCCCCAAGC 58.883 50.000 0.00 0.00 39.73 4.01
3248 4129 0.757935 ATGTGCATGATCCCCAAGCC 60.758 55.000 0.00 0.00 38.62 4.35
3249 4130 1.076485 GTGCATGATCCCCAAGCCT 60.076 57.895 0.00 0.00 38.62 4.58
3250 4131 0.685458 GTGCATGATCCCCAAGCCTT 60.685 55.000 0.00 0.00 38.62 4.35
3251 4132 0.396139 TGCATGATCCCCAAGCCTTC 60.396 55.000 0.00 0.00 38.62 3.46
3252 4133 0.396139 GCATGATCCCCAAGCCTTCA 60.396 55.000 0.00 0.00 33.67 3.02
3253 4134 1.961435 GCATGATCCCCAAGCCTTCAA 60.961 52.381 0.00 0.00 33.67 2.69
3254 4135 2.459644 CATGATCCCCAAGCCTTCAAA 58.540 47.619 0.00 0.00 0.00 2.69
3255 4136 2.692709 TGATCCCCAAGCCTTCAAAA 57.307 45.000 0.00 0.00 0.00 2.44
3256 4137 3.188880 TGATCCCCAAGCCTTCAAAAT 57.811 42.857 0.00 0.00 0.00 1.82
3257 4138 3.519667 TGATCCCCAAGCCTTCAAAATT 58.480 40.909 0.00 0.00 0.00 1.82
3258 4139 3.261390 TGATCCCCAAGCCTTCAAAATTG 59.739 43.478 0.00 0.00 0.00 2.32
3259 4140 2.969628 TCCCCAAGCCTTCAAAATTGA 58.030 42.857 0.00 0.00 34.92 2.57
3260 4141 3.519667 TCCCCAAGCCTTCAAAATTGAT 58.480 40.909 0.00 0.00 37.00 2.57
3261 4142 3.261390 TCCCCAAGCCTTCAAAATTGATG 59.739 43.478 0.00 0.00 37.00 3.07
3262 4143 3.008266 CCCCAAGCCTTCAAAATTGATGT 59.992 43.478 0.00 0.00 37.00 3.06
3263 4144 4.222588 CCCCAAGCCTTCAAAATTGATGTA 59.777 41.667 0.00 0.00 37.00 2.29
3264 4145 5.279910 CCCCAAGCCTTCAAAATTGATGTAA 60.280 40.000 0.00 0.00 37.00 2.41
3265 4146 5.870978 CCCAAGCCTTCAAAATTGATGTAAG 59.129 40.000 0.00 0.00 37.00 2.34
3266 4147 5.870978 CCAAGCCTTCAAAATTGATGTAAGG 59.129 40.000 7.09 7.09 37.00 2.69
3267 4148 6.458210 CAAGCCTTCAAAATTGATGTAAGGT 58.542 36.000 11.36 0.52 35.11 3.50
3268 4149 6.029346 AGCCTTCAAAATTGATGTAAGGTG 57.971 37.500 11.36 0.00 35.11 4.00
3269 4150 4.627035 GCCTTCAAAATTGATGTAAGGTGC 59.373 41.667 11.36 3.20 35.11 5.01
3270 4151 5.782047 CCTTCAAAATTGATGTAAGGTGCA 58.218 37.500 0.00 0.00 37.00 4.57
3271 4152 6.400568 CCTTCAAAATTGATGTAAGGTGCAT 58.599 36.000 0.00 0.00 37.00 3.96
3272 4153 6.875195 CCTTCAAAATTGATGTAAGGTGCATT 59.125 34.615 0.00 0.00 37.00 3.56
3273 4154 8.034215 CCTTCAAAATTGATGTAAGGTGCATTA 58.966 33.333 0.00 0.00 37.00 1.90
3274 4155 8.984891 TTCAAAATTGATGTAAGGTGCATTAG 57.015 30.769 0.00 0.00 37.00 1.73
3275 4156 8.121305 TCAAAATTGATGTAAGGTGCATTAGT 57.879 30.769 0.00 0.00 31.01 2.24
3276 4157 8.584157 TCAAAATTGATGTAAGGTGCATTAGTT 58.416 29.630 0.00 0.00 31.01 2.24
3277 4158 9.853555 CAAAATTGATGTAAGGTGCATTAGTTA 57.146 29.630 0.00 0.00 0.00 2.24
3279 4160 8.807948 AATTGATGTAAGGTGCATTAGTTAGT 57.192 30.769 0.00 0.00 0.00 2.24
3280 4161 9.899661 AATTGATGTAAGGTGCATTAGTTAGTA 57.100 29.630 0.00 0.00 0.00 1.82
3281 4162 8.712285 TTGATGTAAGGTGCATTAGTTAGTAC 57.288 34.615 0.00 0.00 0.00 2.73
3282 4163 8.074613 TGATGTAAGGTGCATTAGTTAGTACT 57.925 34.615 0.00 0.00 38.44 2.73
3283 4164 9.192642 TGATGTAAGGTGCATTAGTTAGTACTA 57.807 33.333 0.00 0.00 35.78 1.82
3284 4165 9.680315 GATGTAAGGTGCATTAGTTAGTACTAG 57.320 37.037 2.23 0.00 38.09 2.57
3285 4166 7.486647 TGTAAGGTGCATTAGTTAGTACTAGC 58.513 38.462 8.59 8.59 38.09 3.42
3286 4167 6.540438 AAGGTGCATTAGTTAGTACTAGCA 57.460 37.500 17.72 12.65 38.09 3.49
3287 4168 6.540438 AGGTGCATTAGTTAGTACTAGCAA 57.460 37.500 17.72 10.59 38.79 3.91
3288 4169 6.942976 AGGTGCATTAGTTAGTACTAGCAAA 58.057 36.000 17.72 7.28 38.79 3.68
3289 4170 7.391620 AGGTGCATTAGTTAGTACTAGCAAAA 58.608 34.615 17.72 11.84 38.79 2.44
3290 4171 7.881232 AGGTGCATTAGTTAGTACTAGCAAAAA 59.119 33.333 17.72 9.71 38.79 1.94
3291 4172 8.175716 GGTGCATTAGTTAGTACTAGCAAAAAG 58.824 37.037 17.72 9.97 38.79 2.27
3292 4173 8.175716 GTGCATTAGTTAGTACTAGCAAAAAGG 58.824 37.037 17.72 11.42 38.79 3.11
3293 4174 7.148306 TGCATTAGTTAGTACTAGCAAAAAGGC 60.148 37.037 17.72 18.72 35.99 4.35
3295 4176 8.604890 CATTAGTTAGTACTAGCAAAAAGGCTC 58.395 37.037 17.72 0.00 44.54 4.70
3296 4177 6.110411 AGTTAGTACTAGCAAAAAGGCTCA 57.890 37.500 17.72 0.00 44.54 4.26
3297 4178 6.712276 AGTTAGTACTAGCAAAAAGGCTCAT 58.288 36.000 17.72 0.00 44.54 2.90
3298 4179 6.595716 AGTTAGTACTAGCAAAAAGGCTCATG 59.404 38.462 17.72 0.00 44.54 3.07
3299 4180 4.911390 AGTACTAGCAAAAAGGCTCATGT 58.089 39.130 0.00 0.00 44.54 3.21
3300 4181 4.697352 AGTACTAGCAAAAAGGCTCATGTG 59.303 41.667 0.00 0.00 44.54 3.21
3301 4182 3.490348 ACTAGCAAAAAGGCTCATGTGT 58.510 40.909 0.00 0.00 44.54 3.72
3302 4183 3.891366 ACTAGCAAAAAGGCTCATGTGTT 59.109 39.130 0.00 0.00 44.54 3.32
3303 4184 3.102052 AGCAAAAAGGCTCATGTGTTG 57.898 42.857 0.00 0.00 41.05 3.33
3304 4185 1.528161 GCAAAAAGGCTCATGTGTTGC 59.472 47.619 0.00 0.00 33.85 4.17
3305 4186 2.804212 GCAAAAAGGCTCATGTGTTGCT 60.804 45.455 4.85 0.00 37.49 3.91
3306 4187 3.054878 CAAAAAGGCTCATGTGTTGCTC 58.945 45.455 0.00 0.00 0.00 4.26
3307 4188 1.251251 AAAGGCTCATGTGTTGCTCC 58.749 50.000 0.00 0.00 0.00 4.70
3308 4189 0.111061 AAGGCTCATGTGTTGCTCCA 59.889 50.000 0.00 0.00 0.00 3.86
3309 4190 0.322277 AGGCTCATGTGTTGCTCCAG 60.322 55.000 0.00 0.00 0.00 3.86
3310 4191 1.310933 GGCTCATGTGTTGCTCCAGG 61.311 60.000 0.00 0.00 0.00 4.45
3311 4192 0.607489 GCTCATGTGTTGCTCCAGGT 60.607 55.000 0.00 0.00 0.00 4.00
3312 4193 1.339055 GCTCATGTGTTGCTCCAGGTA 60.339 52.381 0.00 0.00 0.00 3.08
3313 4194 2.350522 CTCATGTGTTGCTCCAGGTAC 58.649 52.381 0.00 0.00 0.00 3.34
3314 4195 1.696884 TCATGTGTTGCTCCAGGTACA 59.303 47.619 0.00 0.00 0.00 2.90
3315 4196 2.105649 TCATGTGTTGCTCCAGGTACAA 59.894 45.455 0.00 0.00 0.00 2.41
3316 4197 2.719531 TGTGTTGCTCCAGGTACAAA 57.280 45.000 0.00 0.00 0.00 2.83
3317 4198 3.006112 TGTGTTGCTCCAGGTACAAAA 57.994 42.857 0.00 0.00 0.00 2.44
3318 4199 3.561143 TGTGTTGCTCCAGGTACAAAAT 58.439 40.909 0.00 0.00 0.00 1.82
3319 4200 4.720046 TGTGTTGCTCCAGGTACAAAATA 58.280 39.130 0.00 0.00 0.00 1.40
3320 4201 5.133941 TGTGTTGCTCCAGGTACAAAATAA 58.866 37.500 0.00 0.00 0.00 1.40
3321 4202 5.594725 TGTGTTGCTCCAGGTACAAAATAAA 59.405 36.000 0.00 0.00 0.00 1.40
3322 4203 6.266558 TGTGTTGCTCCAGGTACAAAATAAAT 59.733 34.615 0.00 0.00 0.00 1.40
3323 4204 7.448777 TGTGTTGCTCCAGGTACAAAATAAATA 59.551 33.333 0.00 0.00 0.00 1.40
3324 4205 8.301002 GTGTTGCTCCAGGTACAAAATAAATAA 58.699 33.333 0.00 0.00 0.00 1.40
3325 4206 8.519526 TGTTGCTCCAGGTACAAAATAAATAAG 58.480 33.333 0.00 0.00 0.00 1.73
3326 4207 7.639113 TGCTCCAGGTACAAAATAAATAAGG 57.361 36.000 0.00 0.00 0.00 2.69
3327 4208 7.406916 TGCTCCAGGTACAAAATAAATAAGGA 58.593 34.615 0.00 0.00 0.00 3.36
3328 4209 7.338449 TGCTCCAGGTACAAAATAAATAAGGAC 59.662 37.037 0.00 0.00 0.00 3.85
3329 4210 7.338449 GCTCCAGGTACAAAATAAATAAGGACA 59.662 37.037 0.00 0.00 0.00 4.02
3330 4211 9.408648 CTCCAGGTACAAAATAAATAAGGACAT 57.591 33.333 0.00 0.00 0.00 3.06
3331 4212 9.184523 TCCAGGTACAAAATAAATAAGGACATG 57.815 33.333 0.00 0.00 0.00 3.21
3332 4213 8.413229 CCAGGTACAAAATAAATAAGGACATGG 58.587 37.037 0.00 0.00 30.93 3.66
3333 4214 7.920682 CAGGTACAAAATAAATAAGGACATGGC 59.079 37.037 0.00 0.00 0.00 4.40
3334 4215 7.839200 AGGTACAAAATAAATAAGGACATGGCT 59.161 33.333 0.00 0.00 0.00 4.75
3335 4216 9.127277 GGTACAAAATAAATAAGGACATGGCTA 57.873 33.333 0.00 0.00 0.00 3.93
3337 4218 7.716612 ACAAAATAAATAAGGACATGGCTAGC 58.283 34.615 6.04 6.04 0.00 3.42
3338 4219 6.560253 AAATAAATAAGGACATGGCTAGCG 57.440 37.500 9.00 0.00 0.00 4.26
3339 4220 2.550830 AATAAGGACATGGCTAGCGG 57.449 50.000 9.00 3.28 0.00 5.52
3340 4221 0.687354 ATAAGGACATGGCTAGCGGG 59.313 55.000 9.00 2.89 0.00 6.13
3341 4222 2.040009 TAAGGACATGGCTAGCGGGC 62.040 60.000 9.00 2.55 41.27 6.13
3359 4240 4.008933 GCCCGAGCACTCACTGGT 62.009 66.667 0.00 0.00 39.53 4.00
3360 4241 2.646175 GCCCGAGCACTCACTGGTA 61.646 63.158 0.00 0.00 39.53 3.25
3361 4242 1.513158 CCCGAGCACTCACTGGTAG 59.487 63.158 0.00 0.00 0.00 3.18
3362 4243 1.513158 CCGAGCACTCACTGGTAGG 59.487 63.158 0.00 0.00 36.89 3.18
3363 4244 0.965866 CCGAGCACTCACTGGTAGGA 60.966 60.000 0.00 0.00 43.86 2.94
3364 4245 0.888619 CGAGCACTCACTGGTAGGAA 59.111 55.000 0.00 0.00 0.00 3.36
3365 4246 1.402984 CGAGCACTCACTGGTAGGAAC 60.403 57.143 0.00 0.00 0.00 3.62
3366 4247 1.896465 GAGCACTCACTGGTAGGAACT 59.104 52.381 0.00 0.00 46.37 3.01
3367 4248 3.090037 GAGCACTCACTGGTAGGAACTA 58.910 50.000 0.00 0.00 41.75 2.24
3368 4249 3.093057 AGCACTCACTGGTAGGAACTAG 58.907 50.000 0.00 0.00 44.14 2.57
3377 4258 2.425578 GTAGGAACTAGCGCTCATCC 57.574 55.000 16.34 20.14 44.14 3.51
3378 4259 1.681793 GTAGGAACTAGCGCTCATCCA 59.318 52.381 27.71 16.26 44.14 3.41
3379 4260 1.195115 AGGAACTAGCGCTCATCCAA 58.805 50.000 27.71 6.94 36.02 3.53
3380 4261 1.555075 AGGAACTAGCGCTCATCCAAA 59.445 47.619 27.71 6.26 36.02 3.28
3381 4262 2.171448 AGGAACTAGCGCTCATCCAAAT 59.829 45.455 27.71 12.34 36.02 2.32
3382 4263 3.388024 AGGAACTAGCGCTCATCCAAATA 59.612 43.478 27.71 4.92 36.02 1.40
3383 4264 4.040952 AGGAACTAGCGCTCATCCAAATAT 59.959 41.667 27.71 11.78 36.02 1.28
3384 4265 4.153117 GGAACTAGCGCTCATCCAAATATG 59.847 45.833 16.34 0.00 0.00 1.78
3385 4266 8.911494 AGGAACTAGCGCTCATCCAAATATGG 62.911 46.154 27.71 3.31 43.45 2.74
3405 4286 2.612200 AAAAAGTAGCTGACGCGCA 58.388 47.368 5.73 4.25 42.32 6.09
3406 4287 0.234884 AAAAAGTAGCTGACGCGCAC 59.765 50.000 5.73 0.41 42.32 5.34
3408 4289 2.742710 AAAGTAGCTGACGCGCACGA 62.743 55.000 5.73 0.00 43.93 4.35
3409 4290 3.533691 GTAGCTGACGCGCACGAC 61.534 66.667 5.73 0.00 43.93 4.34
3410 4291 4.771356 TAGCTGACGCGCACGACC 62.771 66.667 5.73 0.00 43.93 4.79
3419 4300 4.336174 CGCACGACCGCAATTTAC 57.664 55.556 0.00 0.00 0.00 2.01
3420 4301 1.785321 CGCACGACCGCAATTTACT 59.215 52.632 0.00 0.00 0.00 2.24
3421 4302 0.993532 CGCACGACCGCAATTTACTA 59.006 50.000 0.00 0.00 0.00 1.82
3422 4303 1.390803 CGCACGACCGCAATTTACTAA 59.609 47.619 0.00 0.00 0.00 2.24
3423 4304 2.159814 CGCACGACCGCAATTTACTAAA 60.160 45.455 0.00 0.00 0.00 1.85
3424 4305 3.664798 CGCACGACCGCAATTTACTAAAA 60.665 43.478 0.00 0.00 0.00 1.52
3425 4306 4.220572 GCACGACCGCAATTTACTAAAAA 58.779 39.130 0.00 0.00 0.00 1.94
3443 4324 3.747099 AAAAGAAATCATGTCCTCGCG 57.253 42.857 0.00 0.00 0.00 5.87
3444 4325 2.386661 AAGAAATCATGTCCTCGCGT 57.613 45.000 5.77 0.00 0.00 6.01
3445 4326 1.645034 AGAAATCATGTCCTCGCGTG 58.355 50.000 5.77 2.75 0.00 5.34
3446 4327 0.026803 GAAATCATGTCCTCGCGTGC 59.973 55.000 5.77 0.00 0.00 5.34
3447 4328 0.673333 AAATCATGTCCTCGCGTGCA 60.673 50.000 5.77 0.00 0.00 4.57
3448 4329 0.462581 AATCATGTCCTCGCGTGCAT 60.463 50.000 5.77 0.28 0.00 3.96
3449 4330 0.462581 ATCATGTCCTCGCGTGCATT 60.463 50.000 5.77 0.00 0.00 3.56
3450 4331 0.673333 TCATGTCCTCGCGTGCATTT 60.673 50.000 5.77 0.00 0.00 2.32
3451 4332 1.006086 CATGTCCTCGCGTGCATTTA 58.994 50.000 5.77 0.00 0.00 1.40
3452 4333 1.599071 CATGTCCTCGCGTGCATTTAT 59.401 47.619 5.77 0.00 0.00 1.40
3453 4334 1.732941 TGTCCTCGCGTGCATTTATT 58.267 45.000 5.77 0.00 0.00 1.40
3454 4335 2.080693 TGTCCTCGCGTGCATTTATTT 58.919 42.857 5.77 0.00 0.00 1.40
3455 4336 2.159585 TGTCCTCGCGTGCATTTATTTG 60.160 45.455 5.77 0.00 0.00 2.32
3456 4337 1.400142 TCCTCGCGTGCATTTATTTGG 59.600 47.619 5.77 0.00 0.00 3.28
3457 4338 1.533756 CCTCGCGTGCATTTATTTGGG 60.534 52.381 5.77 0.00 0.00 4.12
3458 4339 0.453793 TCGCGTGCATTTATTTGGGG 59.546 50.000 5.77 0.00 0.00 4.96
3459 4340 0.453793 CGCGTGCATTTATTTGGGGA 59.546 50.000 0.00 0.00 0.00 4.81
3460 4341 1.066908 CGCGTGCATTTATTTGGGGAT 59.933 47.619 0.00 0.00 0.00 3.85
3461 4342 2.742774 GCGTGCATTTATTTGGGGATC 58.257 47.619 0.00 0.00 0.00 3.36
3462 4343 2.545742 GCGTGCATTTATTTGGGGATCC 60.546 50.000 1.92 1.92 0.00 3.36
3463 4344 2.692557 CGTGCATTTATTTGGGGATCCA 59.307 45.455 15.23 0.00 42.25 3.41
3501 4382 7.639162 ACTGTAACTTCTGATTTAAGTGTCG 57.361 36.000 0.00 0.00 37.26 4.35
3502 4383 7.431249 ACTGTAACTTCTGATTTAAGTGTCGA 58.569 34.615 0.00 0.00 37.26 4.20
3503 4384 7.924412 ACTGTAACTTCTGATTTAAGTGTCGAA 59.076 33.333 0.00 0.00 37.26 3.71
3504 4385 8.651391 TGTAACTTCTGATTTAAGTGTCGAAA 57.349 30.769 0.00 0.00 37.26 3.46
3505 4386 9.268268 TGTAACTTCTGATTTAAGTGTCGAAAT 57.732 29.630 0.00 0.00 37.26 2.17
3508 4389 8.378172 ACTTCTGATTTAAGTGTCGAAATTCA 57.622 30.769 0.00 0.00 35.87 2.57
3509 4390 8.836413 ACTTCTGATTTAAGTGTCGAAATTCAA 58.164 29.630 0.00 0.00 35.87 2.69
3510 4391 9.831737 CTTCTGATTTAAGTGTCGAAATTCAAT 57.168 29.630 0.00 0.00 0.00 2.57
3520 4401 8.925161 AGTGTCGAAATTCAATTTTCTTTTCA 57.075 26.923 0.00 0.00 34.19 2.69
3521 4402 8.807581 AGTGTCGAAATTCAATTTTCTTTTCAC 58.192 29.630 0.00 2.67 34.19 3.18
3522 4403 8.591312 GTGTCGAAATTCAATTTTCTTTTCACA 58.409 29.630 0.00 0.00 34.19 3.58
3523 4404 8.806634 TGTCGAAATTCAATTTTCTTTTCACAG 58.193 29.630 0.00 0.00 34.19 3.66
3524 4405 7.789302 GTCGAAATTCAATTTTCTTTTCACAGC 59.211 33.333 0.00 0.00 34.19 4.40
3525 4406 7.706179 TCGAAATTCAATTTTCTTTTCACAGCT 59.294 29.630 0.00 0.00 34.19 4.24
3526 4407 7.790673 CGAAATTCAATTTTCTTTTCACAGCTG 59.209 33.333 13.48 13.48 34.19 4.24
3527 4408 7.486802 AATTCAATTTTCTTTTCACAGCTGG 57.513 32.000 19.93 7.28 0.00 4.85
3528 4409 4.370917 TCAATTTTCTTTTCACAGCTGGC 58.629 39.130 19.93 0.00 0.00 4.85
3529 4410 4.099881 TCAATTTTCTTTTCACAGCTGGCT 59.900 37.500 19.93 0.00 0.00 4.75
3530 4411 4.677673 ATTTTCTTTTCACAGCTGGCTT 57.322 36.364 19.93 0.00 0.00 4.35
3531 4412 4.470334 TTTTCTTTTCACAGCTGGCTTT 57.530 36.364 19.93 0.00 0.00 3.51
3532 4413 3.715628 TTCTTTTCACAGCTGGCTTTC 57.284 42.857 19.93 0.00 0.00 2.62
3533 4414 2.936202 TCTTTTCACAGCTGGCTTTCT 58.064 42.857 19.93 0.00 0.00 2.52
3534 4415 2.880890 TCTTTTCACAGCTGGCTTTCTC 59.119 45.455 19.93 0.00 0.00 2.87
3535 4416 1.229428 TTTCACAGCTGGCTTTCTCG 58.771 50.000 19.93 0.00 0.00 4.04
3536 4417 1.230635 TTCACAGCTGGCTTTCTCGC 61.231 55.000 19.93 0.00 0.00 5.03
3537 4418 2.740055 ACAGCTGGCTTTCTCGCG 60.740 61.111 19.93 0.00 0.00 5.87
3538 4419 2.433145 CAGCTGGCTTTCTCGCGA 60.433 61.111 9.26 9.26 0.00 5.87
3539 4420 2.433318 AGCTGGCTTTCTCGCGAC 60.433 61.111 3.71 0.00 0.00 5.19
3540 4421 3.843240 GCTGGCTTTCTCGCGACG 61.843 66.667 3.71 1.32 0.00 5.12
3541 4422 2.126463 CTGGCTTTCTCGCGACGA 60.126 61.111 3.71 4.19 0.00 4.20
3581 4462 8.563123 AATCTCATATAGATAGGTTTCGTCGA 57.437 34.615 0.00 0.00 44.56 4.20
3582 4463 7.974482 TCTCATATAGATAGGTTTCGTCGAA 57.026 36.000 2.90 2.90 0.00 3.71
3583 4464 8.563123 TCTCATATAGATAGGTTTCGTCGAAT 57.437 34.615 8.78 0.00 0.00 3.34
3584 4465 9.011095 TCTCATATAGATAGGTTTCGTCGAATT 57.989 33.333 8.78 0.76 0.00 2.17
3585 4466 9.627395 CTCATATAGATAGGTTTCGTCGAATTT 57.373 33.333 8.78 0.40 0.00 1.82
3586 4467 9.976511 TCATATAGATAGGTTTCGTCGAATTTT 57.023 29.630 8.78 0.05 0.00 1.82
3611 4492 0.725117 GGCAACTTTGGATACGACGG 59.275 55.000 0.00 0.00 42.51 4.79
3612 4493 1.673626 GGCAACTTTGGATACGACGGA 60.674 52.381 0.00 0.00 42.51 4.69
3613 4494 1.659098 GCAACTTTGGATACGACGGAG 59.341 52.381 0.00 0.00 42.51 4.63
3614 4495 2.268298 CAACTTTGGATACGACGGAGG 58.732 52.381 0.00 0.00 42.51 4.30
3615 4496 0.175073 ACTTTGGATACGACGGAGGC 59.825 55.000 0.00 0.00 42.51 4.70
3616 4497 0.174845 CTTTGGATACGACGGAGGCA 59.825 55.000 0.00 0.00 42.51 4.75
3617 4498 0.609151 TTTGGATACGACGGAGGCAA 59.391 50.000 0.00 0.00 42.51 4.52
3618 4499 0.108520 TTGGATACGACGGAGGCAAC 60.109 55.000 0.00 0.00 42.51 4.17
3636 4517 6.836577 GGCAACTCTAGTGCTATAGAAAAG 57.163 41.667 3.21 0.00 31.51 2.27
3637 4518 5.235401 GGCAACTCTAGTGCTATAGAAAAGC 59.765 44.000 3.21 0.00 40.50 3.51
3666 4547 3.430471 TCCCAGTAGGACCGCCTA 58.570 61.111 0.00 0.00 44.74 3.93
3675 4556 1.129058 AGGACCGCCTATTAGGTTGG 58.871 55.000 16.96 16.96 44.74 3.77
3676 4557 0.835276 GGACCGCCTATTAGGTTGGT 59.165 55.000 21.66 21.66 45.02 3.67
3677 4558 1.211212 GGACCGCCTATTAGGTTGGTT 59.789 52.381 22.12 11.46 43.28 3.67
3678 4559 2.356432 GGACCGCCTATTAGGTTGGTTT 60.356 50.000 22.12 7.68 43.28 3.27
3679 4560 2.681344 GACCGCCTATTAGGTTGGTTTG 59.319 50.000 22.12 4.77 43.28 2.93
3680 4561 2.040679 ACCGCCTATTAGGTTGGTTTGT 59.959 45.455 17.97 2.17 41.44 2.83
3681 4562 2.422127 CCGCCTATTAGGTTGGTTTGTG 59.578 50.000 11.38 0.00 37.80 3.33
3682 4563 3.078837 CGCCTATTAGGTTGGTTTGTGT 58.921 45.455 11.38 0.00 37.80 3.72
3683 4564 4.255301 CGCCTATTAGGTTGGTTTGTGTA 58.745 43.478 11.38 0.00 37.80 2.90
3684 4565 4.696402 CGCCTATTAGGTTGGTTTGTGTAA 59.304 41.667 11.38 0.00 37.80 2.41
3685 4566 5.181622 CGCCTATTAGGTTGGTTTGTGTAAA 59.818 40.000 11.38 0.00 37.80 2.01
3686 4567 6.294065 CGCCTATTAGGTTGGTTTGTGTAAAA 60.294 38.462 11.38 0.00 37.80 1.52
3687 4568 7.435305 GCCTATTAGGTTGGTTTGTGTAAAAA 58.565 34.615 11.38 0.00 37.80 1.94
3709 4590 5.512753 AAAACTACACACAACATGATGCA 57.487 34.783 0.00 0.00 0.00 3.96
3710 4591 4.488126 AACTACACACAACATGATGCAC 57.512 40.909 0.00 0.00 0.00 4.57
3711 4592 2.813754 ACTACACACAACATGATGCACC 59.186 45.455 0.00 0.00 0.00 5.01
3712 4593 1.985473 ACACACAACATGATGCACCT 58.015 45.000 0.00 0.00 0.00 4.00
3713 4594 2.309613 ACACACAACATGATGCACCTT 58.690 42.857 0.00 0.00 0.00 3.50
3714 4595 2.694628 ACACACAACATGATGCACCTTT 59.305 40.909 0.00 0.00 0.00 3.11
3715 4596 3.132646 ACACACAACATGATGCACCTTTT 59.867 39.130 0.00 0.00 0.00 2.27
3716 4597 4.340666 ACACACAACATGATGCACCTTTTA 59.659 37.500 0.00 0.00 0.00 1.52
3717 4598 4.681025 CACACAACATGATGCACCTTTTAC 59.319 41.667 0.00 0.00 0.00 2.01
3718 4599 4.340666 ACACAACATGATGCACCTTTTACA 59.659 37.500 0.00 0.00 0.00 2.41
3719 4600 5.010922 ACACAACATGATGCACCTTTTACAT 59.989 36.000 0.00 0.00 0.00 2.29
3720 4601 6.208402 ACACAACATGATGCACCTTTTACATA 59.792 34.615 0.00 0.00 0.00 2.29
3721 4602 7.093814 ACACAACATGATGCACCTTTTACATAT 60.094 33.333 0.00 0.00 0.00 1.78
3722 4603 7.221259 CACAACATGATGCACCTTTTACATATG 59.779 37.037 0.00 0.00 0.00 1.78
3723 4604 6.395426 ACATGATGCACCTTTTACATATGG 57.605 37.500 7.80 0.00 0.00 2.74
3724 4605 6.128486 ACATGATGCACCTTTTACATATGGA 58.872 36.000 7.80 0.00 0.00 3.41
3725 4606 6.606796 ACATGATGCACCTTTTACATATGGAA 59.393 34.615 7.80 0.95 0.00 3.53
3726 4607 7.123997 ACATGATGCACCTTTTACATATGGAAA 59.876 33.333 9.14 9.14 0.00 3.13
3727 4608 7.473735 TGATGCACCTTTTACATATGGAAAA 57.526 32.000 21.83 21.83 0.00 2.29
3728 4609 7.546358 TGATGCACCTTTTACATATGGAAAAG 58.454 34.615 33.15 33.15 40.70 2.27
3729 4610 6.909550 TGCACCTTTTACATATGGAAAAGT 57.090 33.333 35.20 25.67 39.83 2.66
3730 4611 6.919721 TGCACCTTTTACATATGGAAAAGTC 58.080 36.000 35.20 27.04 39.83 3.01
3731 4612 6.719370 TGCACCTTTTACATATGGAAAAGTCT 59.281 34.615 35.20 24.02 39.83 3.24
3732 4613 7.885922 TGCACCTTTTACATATGGAAAAGTCTA 59.114 33.333 35.20 22.66 39.83 2.59
3733 4614 8.736244 GCACCTTTTACATATGGAAAAGTCTAA 58.264 33.333 35.20 13.88 39.83 2.10
3735 4616 8.957466 ACCTTTTACATATGGAAAAGTCTAAGC 58.043 33.333 35.20 0.00 39.83 3.09
3736 4617 9.178758 CCTTTTACATATGGAAAAGTCTAAGCT 57.821 33.333 35.20 5.43 39.83 3.74
3738 4619 9.733556 TTTTACATATGGAAAAGTCTAAGCTCA 57.266 29.630 19.86 0.00 0.00 4.26
3739 4620 8.718102 TTACATATGGAAAAGTCTAAGCTCAC 57.282 34.615 7.80 0.00 0.00 3.51
3740 4621 6.116126 ACATATGGAAAAGTCTAAGCTCACC 58.884 40.000 7.80 0.00 0.00 4.02
3741 4622 4.640771 ATGGAAAAGTCTAAGCTCACCA 57.359 40.909 0.00 0.00 0.00 4.17
3742 4623 4.640771 TGGAAAAGTCTAAGCTCACCAT 57.359 40.909 0.00 0.00 0.00 3.55
3743 4624 4.579869 TGGAAAAGTCTAAGCTCACCATC 58.420 43.478 0.00 0.00 0.00 3.51
3744 4625 3.619038 GGAAAAGTCTAAGCTCACCATCG 59.381 47.826 0.00 0.00 0.00 3.84
3745 4626 4.495422 GAAAAGTCTAAGCTCACCATCGA 58.505 43.478 0.00 0.00 0.00 3.59
3746 4627 4.744795 AAAGTCTAAGCTCACCATCGAT 57.255 40.909 0.00 0.00 0.00 3.59
3747 4628 3.724508 AGTCTAAGCTCACCATCGATG 57.275 47.619 18.76 18.76 0.00 3.84
3757 4638 3.254629 CCATCGATGGGGCTATTGG 57.745 57.895 32.99 9.03 44.31 3.16
3758 4639 0.692476 CCATCGATGGGGCTATTGGA 59.308 55.000 32.99 0.00 44.31 3.53
3759 4640 1.339438 CCATCGATGGGGCTATTGGAG 60.339 57.143 32.99 6.05 44.31 3.86
3760 4641 0.987294 ATCGATGGGGCTATTGGAGG 59.013 55.000 0.00 0.00 0.00 4.30
3767 4648 3.168773 GGCTATTGGAGGCGAAACA 57.831 52.632 0.00 0.00 41.55 2.83
3768 4649 1.459450 GGCTATTGGAGGCGAAACAA 58.541 50.000 0.00 0.00 41.55 2.83
3769 4650 1.401905 GGCTATTGGAGGCGAAACAAG 59.598 52.381 0.00 0.00 41.55 3.16
3770 4651 1.401905 GCTATTGGAGGCGAAACAAGG 59.598 52.381 0.00 0.00 0.00 3.61
3771 4652 2.939640 GCTATTGGAGGCGAAACAAGGA 60.940 50.000 0.00 0.00 0.00 3.36
3772 4653 1.534729 ATTGGAGGCGAAACAAGGAC 58.465 50.000 0.00 0.00 0.00 3.85
3773 4654 0.181587 TTGGAGGCGAAACAAGGACA 59.818 50.000 0.00 0.00 0.00 4.02
3774 4655 0.181587 TGGAGGCGAAACAAGGACAA 59.818 50.000 0.00 0.00 0.00 3.18
3775 4656 1.202879 TGGAGGCGAAACAAGGACAAT 60.203 47.619 0.00 0.00 0.00 2.71
3776 4657 2.039216 TGGAGGCGAAACAAGGACAATA 59.961 45.455 0.00 0.00 0.00 1.90
3777 4658 3.078837 GGAGGCGAAACAAGGACAATAA 58.921 45.455 0.00 0.00 0.00 1.40
3778 4659 3.504520 GGAGGCGAAACAAGGACAATAAA 59.495 43.478 0.00 0.00 0.00 1.40
3779 4660 4.157840 GGAGGCGAAACAAGGACAATAAAT 59.842 41.667 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.231928 GGGGAGAGAGAGAGGGGTC 59.768 68.421 0.00 0.00 0.00 4.46
1 2 2.329399 GGGGGAGAGAGAGAGGGGT 61.329 68.421 0.00 0.00 0.00 4.95
2 3 2.612251 GGGGGAGAGAGAGAGGGG 59.388 72.222 0.00 0.00 0.00 4.79
3 4 2.197324 CGGGGGAGAGAGAGAGGG 59.803 72.222 0.00 0.00 0.00 4.30
4 5 2.520741 GCGGGGGAGAGAGAGAGG 60.521 72.222 0.00 0.00 0.00 3.69
29 30 0.104120 TCGTGGTGGAGAACAGTGTG 59.896 55.000 0.00 0.00 0.00 3.82
112 117 0.720027 GGTCGCGACTAAGAAAAGGC 59.280 55.000 35.50 13.58 0.00 4.35
114 119 0.365859 GCGGTCGCGACTAAGAAAAG 59.634 55.000 35.50 18.02 0.00 2.27
115 120 1.010419 GGCGGTCGCGACTAAGAAAA 61.010 55.000 35.50 0.00 43.06 2.29
116 121 1.444895 GGCGGTCGCGACTAAGAAA 60.445 57.895 35.50 0.00 43.06 2.52
117 122 2.180017 GGCGGTCGCGACTAAGAA 59.820 61.111 35.50 0.00 43.06 2.52
136 141 6.071952 TCCTTATTTGAAAGACAGCCAATGAC 60.072 38.462 0.00 0.00 0.00 3.06
137 142 6.009589 TCCTTATTTGAAAGACAGCCAATGA 58.990 36.000 0.00 0.00 0.00 2.57
142 147 4.396478 GTCCTCCTTATTTGAAAGACAGCC 59.604 45.833 0.00 0.00 0.00 4.85
145 150 5.473504 GCTTGTCCTCCTTATTTGAAAGACA 59.526 40.000 0.00 0.00 0.00 3.41
146 151 5.390991 CGCTTGTCCTCCTTATTTGAAAGAC 60.391 44.000 0.00 0.00 0.00 3.01
156 161 2.577059 CCGCGCTTGTCCTCCTTA 59.423 61.111 5.56 0.00 0.00 2.69
198 207 0.392706 GTTTGGTTCAAAGCAGGGGG 59.607 55.000 0.00 0.00 37.74 5.40
229 238 1.689892 GGGGGTGGGTTTGAACTTTGA 60.690 52.381 0.00 0.00 0.00 2.69
230 239 0.756294 GGGGGTGGGTTTGAACTTTG 59.244 55.000 0.00 0.00 0.00 2.77
231 240 0.757561 CGGGGGTGGGTTTGAACTTT 60.758 55.000 0.00 0.00 0.00 2.66
232 241 1.152631 CGGGGGTGGGTTTGAACTT 60.153 57.895 0.00 0.00 0.00 2.66
233 242 2.518933 CGGGGGTGGGTTTGAACT 59.481 61.111 0.00 0.00 0.00 3.01
234 243 3.299977 GCGGGGGTGGGTTTGAAC 61.300 66.667 0.00 0.00 0.00 3.18
235 244 4.607025 GGCGGGGGTGGGTTTGAA 62.607 66.667 0.00 0.00 0.00 2.69
308 317 2.055042 AGCCTCCTGCACGGACTAG 61.055 63.158 1.25 0.00 44.83 2.57
326 335 5.357878 GCCTTGTTGGTTGAAGATATGATCA 59.642 40.000 0.00 0.00 38.35 2.92
331 340 3.016736 CGGCCTTGTTGGTTGAAGATAT 58.983 45.455 0.00 0.00 38.35 1.63
506 539 2.483188 GGCCGGACTTGTAGTCAATAGG 60.483 54.545 5.05 7.16 46.79 2.57
511 544 2.967397 CGGCCGGACTTGTAGTCA 59.033 61.111 20.10 0.00 46.79 3.41
512 545 2.508663 GCGGCCGGACTTGTAGTC 60.509 66.667 29.38 1.03 44.32 2.59
574 611 3.329889 TTGACTCCATGGCGGCCT 61.330 61.111 21.46 2.61 33.14 5.19
620 660 9.817809 TTGATACTAGTAATAACAAGAAGGCAG 57.182 33.333 6.70 0.00 0.00 4.85
718 766 6.910536 AAGCCATATCTTCTTCTTGTTACG 57.089 37.500 0.00 0.00 0.00 3.18
746 804 8.763601 AGATAAACTAGTAGGATCAAAACAGCT 58.236 33.333 0.00 0.00 0.00 4.24
770 828 5.421374 TCTCTCATGATCTGCAAAAGAGAGA 59.579 40.000 18.81 18.81 46.33 3.10
789 847 4.619973 CACTGGTGCTATCTTCATCTCTC 58.380 47.826 0.00 0.00 0.00 3.20
807 865 1.069973 TCATCGTTTTCGCTTGCACTG 60.070 47.619 0.00 0.00 43.73 3.66
825 886 2.262603 AGCGCGCTGATTCTGTCA 59.737 55.556 36.13 0.00 35.05 3.58
872 933 3.068024 CGTGGGCATGTAAAGGCATTATT 59.932 43.478 0.00 0.00 0.00 1.40
873 934 2.622942 CGTGGGCATGTAAAGGCATTAT 59.377 45.455 0.00 0.00 0.00 1.28
874 935 2.020720 CGTGGGCATGTAAAGGCATTA 58.979 47.619 0.00 0.00 0.00 1.90
987 1048 2.565841 GCAGTCATTATCTGGTCCACC 58.434 52.381 0.00 0.00 33.98 4.61
993 1057 3.798878 CAGTGTACGCAGTCATTATCTGG 59.201 47.826 9.48 0.00 43.93 3.86
1005 1069 0.319125 TTGTCGCATCAGTGTACGCA 60.319 50.000 9.48 0.00 0.00 5.24
1128 1195 1.811266 CTTCACAGCATCCCCGACG 60.811 63.158 0.00 0.00 0.00 5.12
1140 1207 2.429478 TCTGGTACGTCGATCTTCACA 58.571 47.619 0.00 0.00 0.00 3.58
1151 1218 2.996631 ACTCGAGGTATTCTGGTACGT 58.003 47.619 18.41 0.00 0.00 3.57
1231 1298 3.696051 GCATGGAAGAAGGACATAAAGCA 59.304 43.478 0.00 0.00 0.00 3.91
1260 1327 0.250295 TGAGCAAACTGAAGGGACCG 60.250 55.000 0.00 0.00 0.00 4.79
1442 1509 5.462398 ACTTGTTCACACTCAAAGTCGATAC 59.538 40.000 0.00 0.00 0.00 2.24
1454 1521 7.225538 CAGAGATTAGTTCAACTTGTTCACACT 59.774 37.037 0.00 0.00 0.00 3.55
1486 1553 5.102953 TCATAGACCAATTCCAGGAGTTG 57.897 43.478 16.26 16.26 0.00 3.16
1572 1640 1.139058 GATAGGGCAGGAGAAGCGAAA 59.861 52.381 0.00 0.00 0.00 3.46
1665 1733 3.749088 TGTAACTTACCATTTGAGTGCGG 59.251 43.478 0.00 0.00 0.00 5.69
1846 1949 8.671921 CACTCTGCAAAGATATTGTAAAGATGT 58.328 33.333 0.00 0.00 0.00 3.06
1943 2046 4.885325 GTGGGTTAACTGGAAGAACTGAAA 59.115 41.667 5.42 0.00 37.43 2.69
2022 2125 6.260050 ACACACTTAAACAGACATGTCGATTT 59.740 34.615 24.51 24.51 39.29 2.17
2023 2126 5.758296 ACACACTTAAACAGACATGTCGATT 59.242 36.000 19.85 17.00 39.29 3.34
2075 2178 8.952278 AGATCTCCTATTCGTACATCATTACTC 58.048 37.037 0.00 0.00 0.00 2.59
2076 2179 8.871629 AGATCTCCTATTCGTACATCATTACT 57.128 34.615 0.00 0.00 0.00 2.24
2077 2180 8.731605 TGAGATCTCCTATTCGTACATCATTAC 58.268 37.037 20.03 0.00 0.00 1.89
2080 2183 7.613411 TCATGAGATCTCCTATTCGTACATCAT 59.387 37.037 20.03 0.00 0.00 2.45
2081 2184 6.942576 TCATGAGATCTCCTATTCGTACATCA 59.057 38.462 20.03 0.00 0.00 3.07
2254 2384 5.542779 CCTATATAGCTGTCTGGGACAAAC 58.457 45.833 4.04 0.00 42.26 2.93
2260 2390 2.540383 TGGCCTATATAGCTGTCTGGG 58.460 52.381 3.32 0.00 0.00 4.45
2388 2523 6.173427 AGATTAAGTGTTGGCATTGGTTTT 57.827 33.333 0.00 0.00 0.00 2.43
2417 2552 6.014327 AGCTTCATGGACCACAAATAAACAAT 60.014 34.615 0.00 0.00 0.00 2.71
2418 2553 5.304101 AGCTTCATGGACCACAAATAAACAA 59.696 36.000 0.00 0.00 0.00 2.83
2473 2608 3.027412 GGTCTTCTCAGCACTATCCTCA 58.973 50.000 0.00 0.00 0.00 3.86
2515 2651 5.723672 AGTTCAAGTACCTCGAATTCTCA 57.276 39.130 3.52 0.00 0.00 3.27
2519 2655 6.289064 ACTTCAAGTTCAAGTACCTCGAATT 58.711 36.000 0.00 0.00 32.08 2.17
2575 2711 9.520515 ACAAGTCTTACATAATTCATCACCTTT 57.479 29.630 0.00 0.00 0.00 3.11
2620 2756 6.706055 TCACACAACTCGATTCTATTCAAC 57.294 37.500 0.00 0.00 0.00 3.18
2626 2762 6.093404 GTCTTCATCACACAACTCGATTCTA 58.907 40.000 0.00 0.00 0.00 2.10
2671 2807 5.837770 ATCTTGGAGGCTCATGATTGATA 57.162 39.130 17.69 0.00 30.47 2.15
2814 2951 9.147732 ACTACTACTCATTGACATTATCCATCA 57.852 33.333 0.00 0.00 0.00 3.07
2952 3818 9.498307 AACTTCAAAGTAAAACAGAAACGTATG 57.502 29.630 0.00 0.00 38.57 2.39
2980 3850 3.005554 GCACAGATCAGCACACAATAGT 58.994 45.455 0.00 0.00 0.00 2.12
3082 3959 0.330604 AATGAGCAGTCCCAGCATGT 59.669 50.000 0.00 0.00 0.00 3.21
3089 3966 3.563390 GCTGATAGAAAATGAGCAGTCCC 59.437 47.826 0.00 0.00 0.00 4.46
3093 3970 5.527951 AGTGATGCTGATAGAAAATGAGCAG 59.472 40.000 5.44 0.00 42.63 4.24
3149 4026 7.812191 GTCACCATGCAAAATAACTATGAAACA 59.188 33.333 0.00 0.00 0.00 2.83
3158 4035 1.910819 CGCGTCACCATGCAAAATAAC 59.089 47.619 0.00 0.00 33.65 1.89
3175 4052 0.179121 TGTACAATACCAGGCTCGCG 60.179 55.000 0.00 0.00 0.00 5.87
3178 4055 2.438021 TGGGATGTACAATACCAGGCTC 59.562 50.000 11.22 0.00 0.00 4.70
3184 4061 4.102524 TGACCAGATGGGATGTACAATACC 59.897 45.833 0.00 3.13 41.15 2.73
3188 4069 4.567537 CCTTTGACCAGATGGGATGTACAA 60.568 45.833 0.00 0.00 41.15 2.41
3211 4092 4.658071 CACATTAGGCGGTGTTCAAATAC 58.342 43.478 0.00 0.00 0.00 1.89
3242 4123 5.870978 CCTTACATCAATTTTGAAGGCTTGG 59.129 40.000 3.46 0.00 41.13 3.61
3243 4124 6.366877 CACCTTACATCAATTTTGAAGGCTTG 59.633 38.462 3.46 0.00 41.13 4.01
3244 4125 6.458210 CACCTTACATCAATTTTGAAGGCTT 58.542 36.000 0.00 0.00 41.13 4.35
3245 4126 5.567423 GCACCTTACATCAATTTTGAAGGCT 60.567 40.000 8.14 0.00 41.13 4.58
3246 4127 4.627035 GCACCTTACATCAATTTTGAAGGC 59.373 41.667 8.14 0.00 41.13 4.35
3247 4128 5.782047 TGCACCTTACATCAATTTTGAAGG 58.218 37.500 7.06 7.06 41.13 3.46
3248 4129 7.894376 AATGCACCTTACATCAATTTTGAAG 57.106 32.000 0.00 0.00 41.13 3.02
3249 4130 8.584157 ACTAATGCACCTTACATCAATTTTGAA 58.416 29.630 0.00 0.00 41.13 2.69
3250 4131 8.121305 ACTAATGCACCTTACATCAATTTTGA 57.879 30.769 0.00 0.00 42.14 2.69
3251 4132 8.761575 AACTAATGCACCTTACATCAATTTTG 57.238 30.769 0.00 0.00 0.00 2.44
3253 4134 9.243105 ACTAACTAATGCACCTTACATCAATTT 57.757 29.630 0.00 0.00 0.00 1.82
3254 4135 8.807948 ACTAACTAATGCACCTTACATCAATT 57.192 30.769 0.00 0.00 0.00 2.32
3255 4136 9.326413 GTACTAACTAATGCACCTTACATCAAT 57.674 33.333 0.00 0.00 0.00 2.57
3256 4137 8.537016 AGTACTAACTAATGCACCTTACATCAA 58.463 33.333 0.00 0.00 32.84 2.57
3257 4138 8.074613 AGTACTAACTAATGCACCTTACATCA 57.925 34.615 0.00 0.00 32.84 3.07
3258 4139 9.680315 CTAGTACTAACTAATGCACCTTACATC 57.320 37.037 3.76 0.00 37.75 3.06
3259 4140 8.142551 GCTAGTACTAACTAATGCACCTTACAT 58.857 37.037 3.76 0.00 37.75 2.29
3260 4141 7.123098 TGCTAGTACTAACTAATGCACCTTACA 59.877 37.037 3.76 0.00 37.75 2.41
3261 4142 7.486647 TGCTAGTACTAACTAATGCACCTTAC 58.513 38.462 3.76 0.00 37.75 2.34
3262 4143 7.649533 TGCTAGTACTAACTAATGCACCTTA 57.350 36.000 3.76 0.00 37.75 2.69
3263 4144 6.540438 TGCTAGTACTAACTAATGCACCTT 57.460 37.500 3.76 0.00 37.75 3.50
3264 4145 6.540438 TTGCTAGTACTAACTAATGCACCT 57.460 37.500 10.74 0.00 38.43 4.00
3265 4146 7.605410 TTTTGCTAGTACTAACTAATGCACC 57.395 36.000 10.74 0.00 38.43 5.01
3266 4147 8.175716 CCTTTTTGCTAGTACTAACTAATGCAC 58.824 37.037 10.74 0.00 38.43 4.57
3267 4148 7.148306 GCCTTTTTGCTAGTACTAACTAATGCA 60.148 37.037 3.76 6.13 37.51 3.96
3268 4149 7.065923 AGCCTTTTTGCTAGTACTAACTAATGC 59.934 37.037 3.76 3.49 40.56 3.56
3269 4150 8.494016 AGCCTTTTTGCTAGTACTAACTAATG 57.506 34.615 3.76 2.15 40.56 1.90
3270 4151 8.319146 TGAGCCTTTTTGCTAGTACTAACTAAT 58.681 33.333 3.76 0.00 42.95 1.73
3271 4152 7.673180 TGAGCCTTTTTGCTAGTACTAACTAA 58.327 34.615 3.76 0.13 42.95 2.24
3272 4153 7.235935 TGAGCCTTTTTGCTAGTACTAACTA 57.764 36.000 3.76 0.00 42.95 2.24
3273 4154 6.110411 TGAGCCTTTTTGCTAGTACTAACT 57.890 37.500 3.76 0.00 42.95 2.24
3274 4155 6.371825 ACATGAGCCTTTTTGCTAGTACTAAC 59.628 38.462 3.76 0.00 42.95 2.34
3275 4156 6.371548 CACATGAGCCTTTTTGCTAGTACTAA 59.628 38.462 3.76 0.00 42.95 2.24
3276 4157 5.874810 CACATGAGCCTTTTTGCTAGTACTA 59.125 40.000 0.00 1.89 42.95 1.82
3277 4158 4.697352 CACATGAGCCTTTTTGCTAGTACT 59.303 41.667 0.00 0.00 42.95 2.73
3278 4159 4.455877 ACACATGAGCCTTTTTGCTAGTAC 59.544 41.667 0.00 0.00 42.95 2.73
3279 4160 4.651778 ACACATGAGCCTTTTTGCTAGTA 58.348 39.130 0.00 0.00 42.95 1.82
3280 4161 3.490348 ACACATGAGCCTTTTTGCTAGT 58.510 40.909 0.00 0.00 42.95 2.57
3281 4162 4.232221 CAACACATGAGCCTTTTTGCTAG 58.768 43.478 0.00 0.00 42.95 3.42
3282 4163 3.552684 GCAACACATGAGCCTTTTTGCTA 60.553 43.478 0.00 0.00 42.95 3.49
3283 4164 2.804212 GCAACACATGAGCCTTTTTGCT 60.804 45.455 0.00 0.00 46.37 3.91
3284 4165 1.528161 GCAACACATGAGCCTTTTTGC 59.472 47.619 0.00 0.00 0.00 3.68
3285 4166 3.054878 GAGCAACACATGAGCCTTTTTG 58.945 45.455 0.00 0.00 0.00 2.44
3286 4167 2.036346 GGAGCAACACATGAGCCTTTTT 59.964 45.455 0.00 0.00 0.00 1.94
3287 4168 1.615392 GGAGCAACACATGAGCCTTTT 59.385 47.619 0.00 0.00 0.00 2.27
3288 4169 1.251251 GGAGCAACACATGAGCCTTT 58.749 50.000 0.00 0.00 0.00 3.11
3289 4170 0.111061 TGGAGCAACACATGAGCCTT 59.889 50.000 0.00 0.00 0.00 4.35
3290 4171 0.322277 CTGGAGCAACACATGAGCCT 60.322 55.000 0.00 0.00 0.00 4.58
3291 4172 1.310933 CCTGGAGCAACACATGAGCC 61.311 60.000 0.00 0.00 0.00 4.70
3292 4173 0.607489 ACCTGGAGCAACACATGAGC 60.607 55.000 0.00 0.00 0.00 4.26
3293 4174 2.289631 TGTACCTGGAGCAACACATGAG 60.290 50.000 0.00 0.00 0.00 2.90
3294 4175 1.696884 TGTACCTGGAGCAACACATGA 59.303 47.619 0.00 0.00 0.00 3.07
3295 4176 2.183478 TGTACCTGGAGCAACACATG 57.817 50.000 0.00 0.00 0.00 3.21
3296 4177 2.949177 TTGTACCTGGAGCAACACAT 57.051 45.000 0.00 0.00 0.00 3.21
3297 4178 2.719531 TTTGTACCTGGAGCAACACA 57.280 45.000 0.00 0.00 0.00 3.72
3298 4179 5.699097 TTATTTTGTACCTGGAGCAACAC 57.301 39.130 0.00 0.00 0.00 3.32
3299 4180 6.909550 ATTTATTTTGTACCTGGAGCAACA 57.090 33.333 0.00 0.00 0.00 3.33
3300 4181 7.973944 CCTTATTTATTTTGTACCTGGAGCAAC 59.026 37.037 0.00 0.00 0.00 4.17
3301 4182 7.891183 TCCTTATTTATTTTGTACCTGGAGCAA 59.109 33.333 0.00 1.96 0.00 3.91
3302 4183 7.338449 GTCCTTATTTATTTTGTACCTGGAGCA 59.662 37.037 0.00 0.00 0.00 4.26
3303 4184 7.338449 TGTCCTTATTTATTTTGTACCTGGAGC 59.662 37.037 0.00 0.00 0.00 4.70
3304 4185 8.801882 TGTCCTTATTTATTTTGTACCTGGAG 57.198 34.615 0.00 0.00 0.00 3.86
3305 4186 9.184523 CATGTCCTTATTTATTTTGTACCTGGA 57.815 33.333 0.00 0.00 0.00 3.86
3306 4187 8.413229 CCATGTCCTTATTTATTTTGTACCTGG 58.587 37.037 0.00 0.00 0.00 4.45
3307 4188 7.920682 GCCATGTCCTTATTTATTTTGTACCTG 59.079 37.037 0.00 0.00 0.00 4.00
3308 4189 7.839200 AGCCATGTCCTTATTTATTTTGTACCT 59.161 33.333 0.00 0.00 0.00 3.08
3309 4190 8.007405 AGCCATGTCCTTATTTATTTTGTACC 57.993 34.615 0.00 0.00 0.00 3.34
3311 4192 8.846211 GCTAGCCATGTCCTTATTTATTTTGTA 58.154 33.333 2.29 0.00 0.00 2.41
3312 4193 7.468631 CGCTAGCCATGTCCTTATTTATTTTGT 60.469 37.037 9.66 0.00 0.00 2.83
3313 4194 6.857964 CGCTAGCCATGTCCTTATTTATTTTG 59.142 38.462 9.66 0.00 0.00 2.44
3314 4195 6.016276 CCGCTAGCCATGTCCTTATTTATTTT 60.016 38.462 9.66 0.00 0.00 1.82
3315 4196 5.473504 CCGCTAGCCATGTCCTTATTTATTT 59.526 40.000 9.66 0.00 0.00 1.40
3316 4197 5.003804 CCGCTAGCCATGTCCTTATTTATT 58.996 41.667 9.66 0.00 0.00 1.40
3317 4198 4.565652 CCCGCTAGCCATGTCCTTATTTAT 60.566 45.833 9.66 0.00 0.00 1.40
3318 4199 3.244422 CCCGCTAGCCATGTCCTTATTTA 60.244 47.826 9.66 0.00 0.00 1.40
3319 4200 2.487265 CCCGCTAGCCATGTCCTTATTT 60.487 50.000 9.66 0.00 0.00 1.40
3320 4201 1.072331 CCCGCTAGCCATGTCCTTATT 59.928 52.381 9.66 0.00 0.00 1.40
3321 4202 0.687354 CCCGCTAGCCATGTCCTTAT 59.313 55.000 9.66 0.00 0.00 1.73
3322 4203 2.040009 GCCCGCTAGCCATGTCCTTA 62.040 60.000 9.66 0.00 0.00 2.69
3323 4204 2.911143 CCCGCTAGCCATGTCCTT 59.089 61.111 9.66 0.00 0.00 3.36
3324 4205 3.866582 GCCCGCTAGCCATGTCCT 61.867 66.667 9.66 0.00 0.00 3.85
3342 4223 2.564553 CTACCAGTGAGTGCTCGGGC 62.565 65.000 0.00 0.00 39.26 6.13
3343 4224 1.513158 CTACCAGTGAGTGCTCGGG 59.487 63.158 0.00 0.00 0.00 5.14
3344 4225 0.965866 TCCTACCAGTGAGTGCTCGG 60.966 60.000 0.00 0.00 0.00 4.63
3345 4226 0.888619 TTCCTACCAGTGAGTGCTCG 59.111 55.000 0.00 0.00 0.00 5.03
3346 4227 1.896465 AGTTCCTACCAGTGAGTGCTC 59.104 52.381 0.00 0.00 0.00 4.26
3347 4228 2.016905 AGTTCCTACCAGTGAGTGCT 57.983 50.000 0.00 0.00 0.00 4.40
3348 4229 2.417515 GCTAGTTCCTACCAGTGAGTGC 60.418 54.545 0.00 0.00 0.00 4.40
3349 4230 2.159366 CGCTAGTTCCTACCAGTGAGTG 60.159 54.545 0.00 0.00 0.00 3.51
3350 4231 2.093106 CGCTAGTTCCTACCAGTGAGT 58.907 52.381 0.00 0.00 0.00 3.41
3351 4232 1.202313 GCGCTAGTTCCTACCAGTGAG 60.202 57.143 0.00 0.00 0.00 3.51
3352 4233 0.815734 GCGCTAGTTCCTACCAGTGA 59.184 55.000 0.00 0.00 0.00 3.41
3353 4234 0.818296 AGCGCTAGTTCCTACCAGTG 59.182 55.000 8.99 0.00 0.00 3.66
3354 4235 1.104630 GAGCGCTAGTTCCTACCAGT 58.895 55.000 11.50 0.00 0.00 4.00
3355 4236 1.103803 TGAGCGCTAGTTCCTACCAG 58.896 55.000 11.50 0.00 0.00 4.00
3356 4237 1.681793 GATGAGCGCTAGTTCCTACCA 59.318 52.381 11.50 0.00 0.00 3.25
3357 4238 1.000052 GGATGAGCGCTAGTTCCTACC 60.000 57.143 11.50 1.88 0.00 3.18
3358 4239 1.681793 TGGATGAGCGCTAGTTCCTAC 59.318 52.381 24.82 7.71 0.00 3.18
3359 4240 2.067365 TGGATGAGCGCTAGTTCCTA 57.933 50.000 24.82 13.79 0.00 2.94
3360 4241 1.195115 TTGGATGAGCGCTAGTTCCT 58.805 50.000 24.82 3.56 0.00 3.36
3361 4242 2.024176 TTTGGATGAGCGCTAGTTCC 57.976 50.000 11.50 17.49 0.00 3.62
3362 4243 4.153117 CCATATTTGGATGAGCGCTAGTTC 59.847 45.833 11.50 7.60 46.92 3.01
3363 4244 4.067896 CCATATTTGGATGAGCGCTAGTT 58.932 43.478 11.50 0.00 46.92 2.24
3364 4245 3.668447 CCATATTTGGATGAGCGCTAGT 58.332 45.455 11.50 0.39 46.92 2.57
3387 4268 0.234884 GTGCGCGTCAGCTACTTTTT 59.765 50.000 8.43 0.00 42.32 1.94
3388 4269 1.860078 GTGCGCGTCAGCTACTTTT 59.140 52.632 8.43 0.00 42.32 2.27
3389 4270 2.372690 CGTGCGCGTCAGCTACTTT 61.373 57.895 12.43 0.00 42.32 2.66
3390 4271 2.805353 CGTGCGCGTCAGCTACTT 60.805 61.111 12.43 0.00 42.32 2.24
3391 4272 3.733960 TCGTGCGCGTCAGCTACT 61.734 61.111 20.50 0.00 42.32 2.57
3392 4273 3.533691 GTCGTGCGCGTCAGCTAC 61.534 66.667 20.50 5.29 42.32 3.58
3393 4274 4.771356 GGTCGTGCGCGTCAGCTA 62.771 66.667 20.50 0.00 42.32 3.32
3400 4281 3.355887 TAAATTGCGGTCGTGCGCG 62.356 57.895 14.79 14.79 37.81 6.86
3401 4282 1.861715 GTAAATTGCGGTCGTGCGC 60.862 57.895 0.00 0.00 37.81 6.09
3402 4283 0.993532 TAGTAAATTGCGGTCGTGCG 59.006 50.000 0.00 0.00 37.81 5.34
3403 4284 3.458779 TTTAGTAAATTGCGGTCGTGC 57.541 42.857 0.00 0.00 0.00 5.34
3422 4303 3.502211 ACGCGAGGACATGATTTCTTTTT 59.498 39.130 15.93 0.00 0.00 1.94
3423 4304 3.074412 ACGCGAGGACATGATTTCTTTT 58.926 40.909 15.93 0.00 0.00 2.27
3424 4305 2.416547 CACGCGAGGACATGATTTCTTT 59.583 45.455 15.93 0.00 0.00 2.52
3425 4306 2.002586 CACGCGAGGACATGATTTCTT 58.997 47.619 15.93 0.00 0.00 2.52
3426 4307 1.645034 CACGCGAGGACATGATTTCT 58.355 50.000 15.93 0.00 0.00 2.52
3427 4308 0.026803 GCACGCGAGGACATGATTTC 59.973 55.000 15.93 0.00 0.00 2.17
3428 4309 0.673333 TGCACGCGAGGACATGATTT 60.673 50.000 15.93 0.00 0.00 2.17
3429 4310 0.462581 ATGCACGCGAGGACATGATT 60.463 50.000 15.93 0.00 30.87 2.57
3430 4311 0.462581 AATGCACGCGAGGACATGAT 60.463 50.000 15.93 0.00 32.17 2.45
3431 4312 0.673333 AAATGCACGCGAGGACATGA 60.673 50.000 15.93 0.00 32.17 3.07
3432 4313 1.006086 TAAATGCACGCGAGGACATG 58.994 50.000 15.93 0.00 32.17 3.21
3433 4314 1.953559 ATAAATGCACGCGAGGACAT 58.046 45.000 15.93 7.64 33.00 3.06
3434 4315 1.732941 AATAAATGCACGCGAGGACA 58.267 45.000 15.93 5.22 0.00 4.02
3435 4316 2.440501 CAAATAAATGCACGCGAGGAC 58.559 47.619 15.93 0.00 0.00 3.85
3436 4317 1.400142 CCAAATAAATGCACGCGAGGA 59.600 47.619 15.93 6.68 0.00 3.71
3437 4318 1.533756 CCCAAATAAATGCACGCGAGG 60.534 52.381 15.93 5.48 0.00 4.63
3438 4319 1.533756 CCCCAAATAAATGCACGCGAG 60.534 52.381 15.93 5.97 0.00 5.03
3439 4320 0.453793 CCCCAAATAAATGCACGCGA 59.546 50.000 15.93 0.00 0.00 5.87
3440 4321 0.453793 TCCCCAAATAAATGCACGCG 59.546 50.000 3.53 3.53 0.00 6.01
3441 4322 2.545742 GGATCCCCAAATAAATGCACGC 60.546 50.000 0.00 0.00 0.00 5.34
3442 4323 2.692557 TGGATCCCCAAATAAATGCACG 59.307 45.455 9.90 0.00 40.09 5.34
3475 4356 8.548721 CGACACTTAAATCAGAAGTTACAGTTT 58.451 33.333 0.00 0.00 34.90 2.66
3476 4357 7.924412 TCGACACTTAAATCAGAAGTTACAGTT 59.076 33.333 0.00 0.00 34.90 3.16
3477 4358 7.431249 TCGACACTTAAATCAGAAGTTACAGT 58.569 34.615 0.00 0.00 34.90 3.55
3478 4359 7.869016 TCGACACTTAAATCAGAAGTTACAG 57.131 36.000 0.00 0.00 34.90 2.74
3479 4360 8.651391 TTTCGACACTTAAATCAGAAGTTACA 57.349 30.769 0.00 0.00 34.90 2.41
3482 4363 8.836413 TGAATTTCGACACTTAAATCAGAAGTT 58.164 29.630 0.00 0.00 34.90 2.66
3483 4364 8.378172 TGAATTTCGACACTTAAATCAGAAGT 57.622 30.769 0.00 0.00 37.64 3.01
3484 4365 9.831737 ATTGAATTTCGACACTTAAATCAGAAG 57.168 29.630 0.00 0.00 0.00 2.85
3494 4375 9.364989 TGAAAAGAAAATTGAATTTCGACACTT 57.635 25.926 3.32 3.30 42.73 3.16
3495 4376 8.807581 GTGAAAAGAAAATTGAATTTCGACACT 58.192 29.630 3.32 0.00 42.73 3.55
3496 4377 8.591312 TGTGAAAAGAAAATTGAATTTCGACAC 58.409 29.630 3.32 9.09 42.73 3.67
3497 4378 8.694975 TGTGAAAAGAAAATTGAATTTCGACA 57.305 26.923 3.32 0.00 42.73 4.35
3498 4379 7.789302 GCTGTGAAAAGAAAATTGAATTTCGAC 59.211 33.333 3.32 0.00 42.73 4.20
3499 4380 7.706179 AGCTGTGAAAAGAAAATTGAATTTCGA 59.294 29.630 3.32 0.00 42.73 3.71
3500 4381 7.790673 CAGCTGTGAAAAGAAAATTGAATTTCG 59.209 33.333 5.25 0.00 42.73 3.46
3501 4382 8.066000 CCAGCTGTGAAAAGAAAATTGAATTTC 58.934 33.333 13.81 0.00 39.16 2.17
3502 4383 7.467675 GCCAGCTGTGAAAAGAAAATTGAATTT 60.468 33.333 13.81 0.00 0.00 1.82
3503 4384 6.017687 GCCAGCTGTGAAAAGAAAATTGAATT 60.018 34.615 13.81 0.00 0.00 2.17
3504 4385 5.467735 GCCAGCTGTGAAAAGAAAATTGAAT 59.532 36.000 13.81 0.00 0.00 2.57
3505 4386 4.810491 GCCAGCTGTGAAAAGAAAATTGAA 59.190 37.500 13.81 0.00 0.00 2.69
3506 4387 4.099881 AGCCAGCTGTGAAAAGAAAATTGA 59.900 37.500 13.81 0.00 0.00 2.57
3507 4388 4.374399 AGCCAGCTGTGAAAAGAAAATTG 58.626 39.130 13.81 0.00 0.00 2.32
3508 4389 4.677673 AGCCAGCTGTGAAAAGAAAATT 57.322 36.364 13.81 0.00 0.00 1.82
3509 4390 4.677673 AAGCCAGCTGTGAAAAGAAAAT 57.322 36.364 13.81 0.00 0.00 1.82
3510 4391 4.160252 AGAAAGCCAGCTGTGAAAAGAAAA 59.840 37.500 13.81 0.00 0.00 2.29
3511 4392 3.701040 AGAAAGCCAGCTGTGAAAAGAAA 59.299 39.130 13.81 0.00 0.00 2.52
3512 4393 3.290710 AGAAAGCCAGCTGTGAAAAGAA 58.709 40.909 13.81 0.00 0.00 2.52
3513 4394 2.880890 GAGAAAGCCAGCTGTGAAAAGA 59.119 45.455 13.81 0.00 0.00 2.52
3514 4395 2.350197 CGAGAAAGCCAGCTGTGAAAAG 60.350 50.000 13.81 0.00 0.00 2.27
3515 4396 1.603802 CGAGAAAGCCAGCTGTGAAAA 59.396 47.619 13.81 0.00 0.00 2.29
3516 4397 1.229428 CGAGAAAGCCAGCTGTGAAA 58.771 50.000 13.81 0.00 0.00 2.69
3517 4398 1.230635 GCGAGAAAGCCAGCTGTGAA 61.231 55.000 13.81 0.00 0.00 3.18
3518 4399 1.669115 GCGAGAAAGCCAGCTGTGA 60.669 57.895 13.81 0.00 0.00 3.58
3519 4400 2.866028 GCGAGAAAGCCAGCTGTG 59.134 61.111 13.81 5.37 0.00 3.66
3520 4401 2.740055 CGCGAGAAAGCCAGCTGT 60.740 61.111 13.81 0.00 0.00 4.40
3521 4402 2.433145 TCGCGAGAAAGCCAGCTG 60.433 61.111 3.71 6.78 37.03 4.24
3522 4403 2.433318 GTCGCGAGAAAGCCAGCT 60.433 61.111 10.24 0.00 45.01 4.24
3523 4404 3.843240 CGTCGCGAGAAAGCCAGC 61.843 66.667 10.24 0.00 45.01 4.85
3524 4405 2.126463 TCGTCGCGAGAAAGCCAG 60.126 61.111 10.24 0.00 45.01 4.85
3555 4436 9.011095 TCGACGAAACCTATCTATATGAGATTT 57.989 33.333 0.00 0.00 42.70 2.17
3556 4437 8.563123 TCGACGAAACCTATCTATATGAGATT 57.437 34.615 0.00 0.00 42.70 2.40
3558 4439 7.974482 TTCGACGAAACCTATCTATATGAGA 57.026 36.000 8.05 0.00 39.01 3.27
3559 4440 9.627395 AAATTCGACGAAACCTATCTATATGAG 57.373 33.333 15.22 0.00 0.00 2.90
3560 4441 9.976511 AAAATTCGACGAAACCTATCTATATGA 57.023 29.630 15.22 0.00 0.00 2.15
3584 4465 4.319911 CGTATCCAAAGTTGCCTCGAAAAA 60.320 41.667 0.00 0.00 0.00 1.94
3585 4466 3.187637 CGTATCCAAAGTTGCCTCGAAAA 59.812 43.478 0.00 0.00 0.00 2.29
3586 4467 2.739913 CGTATCCAAAGTTGCCTCGAAA 59.260 45.455 0.00 0.00 0.00 3.46
3587 4468 2.028839 TCGTATCCAAAGTTGCCTCGAA 60.029 45.455 0.00 0.00 0.00 3.71
3588 4469 1.546923 TCGTATCCAAAGTTGCCTCGA 59.453 47.619 0.00 0.00 0.00 4.04
3589 4470 1.659098 GTCGTATCCAAAGTTGCCTCG 59.341 52.381 0.00 0.00 0.00 4.63
3590 4471 1.659098 CGTCGTATCCAAAGTTGCCTC 59.341 52.381 0.00 0.00 0.00 4.70
3591 4472 1.674817 CCGTCGTATCCAAAGTTGCCT 60.675 52.381 0.00 0.00 0.00 4.75
3592 4473 0.725117 CCGTCGTATCCAAAGTTGCC 59.275 55.000 0.00 0.00 0.00 4.52
3593 4474 1.659098 CTCCGTCGTATCCAAAGTTGC 59.341 52.381 0.00 0.00 0.00 4.17
3594 4475 2.268298 CCTCCGTCGTATCCAAAGTTG 58.732 52.381 0.00 0.00 0.00 3.16
3595 4476 1.405121 GCCTCCGTCGTATCCAAAGTT 60.405 52.381 0.00 0.00 0.00 2.66
3596 4477 0.175073 GCCTCCGTCGTATCCAAAGT 59.825 55.000 0.00 0.00 0.00 2.66
3597 4478 0.174845 TGCCTCCGTCGTATCCAAAG 59.825 55.000 0.00 0.00 0.00 2.77
3598 4479 0.609151 TTGCCTCCGTCGTATCCAAA 59.391 50.000 0.00 0.00 0.00 3.28
3599 4480 0.108520 GTTGCCTCCGTCGTATCCAA 60.109 55.000 0.00 0.00 0.00 3.53
3600 4481 0.968901 AGTTGCCTCCGTCGTATCCA 60.969 55.000 0.00 0.00 0.00 3.41
3601 4482 0.248949 GAGTTGCCTCCGTCGTATCC 60.249 60.000 0.00 0.00 0.00 2.59
3602 4483 0.739561 AGAGTTGCCTCCGTCGTATC 59.260 55.000 0.00 0.00 38.58 2.24
3603 4484 1.948145 CTAGAGTTGCCTCCGTCGTAT 59.052 52.381 0.00 0.00 38.58 3.06
3604 4485 1.339438 ACTAGAGTTGCCTCCGTCGTA 60.339 52.381 0.00 0.00 38.58 3.43
3605 4486 0.608582 ACTAGAGTTGCCTCCGTCGT 60.609 55.000 0.00 0.00 38.58 4.34
3606 4487 0.179161 CACTAGAGTTGCCTCCGTCG 60.179 60.000 0.00 0.00 38.58 5.12
3607 4488 0.458716 GCACTAGAGTTGCCTCCGTC 60.459 60.000 0.00 0.00 38.58 4.79
3608 4489 0.900647 AGCACTAGAGTTGCCTCCGT 60.901 55.000 0.00 0.00 38.58 4.69
3609 4490 1.103803 TAGCACTAGAGTTGCCTCCG 58.896 55.000 0.00 0.00 38.58 4.63
3610 4491 4.145807 TCTATAGCACTAGAGTTGCCTCC 58.854 47.826 0.00 0.00 38.58 4.30
3611 4492 5.776173 TTCTATAGCACTAGAGTTGCCTC 57.224 43.478 0.00 0.00 38.04 4.70
3612 4493 6.546428 TTTTCTATAGCACTAGAGTTGCCT 57.454 37.500 0.00 0.00 0.00 4.75
3613 4494 5.235401 GCTTTTCTATAGCACTAGAGTTGCC 59.765 44.000 0.00 0.00 38.51 4.52
3614 4495 5.812642 TGCTTTTCTATAGCACTAGAGTTGC 59.187 40.000 0.00 0.00 43.30 4.17
3649 4530 3.430471 TAGGCGGTCCTACTGGGA 58.570 61.111 0.00 0.00 43.91 4.37
3656 4537 1.129058 CCAACCTAATAGGCGGTCCT 58.871 55.000 6.17 0.00 46.57 3.85
3657 4538 0.835276 ACCAACCTAATAGGCGGTCC 59.165 55.000 13.58 0.00 39.53 4.46
3658 4539 2.681344 CAAACCAACCTAATAGGCGGTC 59.319 50.000 18.12 0.00 41.99 4.79
3659 4540 2.040679 ACAAACCAACCTAATAGGCGGT 59.959 45.455 13.58 13.58 43.98 5.68
3660 4541 2.422127 CACAAACCAACCTAATAGGCGG 59.578 50.000 6.17 9.87 39.63 6.13
3661 4542 3.078837 ACACAAACCAACCTAATAGGCG 58.921 45.455 6.17 0.00 39.63 5.52
3662 4543 6.578163 TTTACACAAACCAACCTAATAGGC 57.422 37.500 6.17 0.00 39.63 3.93
3686 4567 5.748152 GTGCATCATGTTGTGTGTAGTTTTT 59.252 36.000 5.69 0.00 0.00 1.94
3687 4568 5.280945 GTGCATCATGTTGTGTGTAGTTTT 58.719 37.500 5.69 0.00 0.00 2.43
3688 4569 4.261572 GGTGCATCATGTTGTGTGTAGTTT 60.262 41.667 5.69 0.00 0.00 2.66
3689 4570 3.253188 GGTGCATCATGTTGTGTGTAGTT 59.747 43.478 5.69 0.00 0.00 2.24
3690 4571 2.813754 GGTGCATCATGTTGTGTGTAGT 59.186 45.455 5.69 0.00 0.00 2.73
3691 4572 3.076621 AGGTGCATCATGTTGTGTGTAG 58.923 45.455 0.00 0.00 0.00 2.74
3692 4573 3.138884 AGGTGCATCATGTTGTGTGTA 57.861 42.857 0.00 0.00 0.00 2.90
3693 4574 1.985473 AGGTGCATCATGTTGTGTGT 58.015 45.000 0.00 0.00 0.00 3.72
3694 4575 3.374220 AAAGGTGCATCATGTTGTGTG 57.626 42.857 0.00 0.00 0.00 3.82
3695 4576 4.340666 TGTAAAAGGTGCATCATGTTGTGT 59.659 37.500 0.00 0.00 0.00 3.72
3696 4577 4.869215 TGTAAAAGGTGCATCATGTTGTG 58.131 39.130 0.00 0.00 0.00 3.33
3697 4578 5.726980 ATGTAAAAGGTGCATCATGTTGT 57.273 34.783 0.00 0.00 0.00 3.32
3698 4579 6.698329 CCATATGTAAAAGGTGCATCATGTTG 59.302 38.462 0.00 0.00 34.06 3.33
3699 4580 6.606796 TCCATATGTAAAAGGTGCATCATGTT 59.393 34.615 0.00 0.00 34.06 2.71
3700 4581 6.128486 TCCATATGTAAAAGGTGCATCATGT 58.872 36.000 0.00 0.00 34.06 3.21
3701 4582 6.638096 TCCATATGTAAAAGGTGCATCATG 57.362 37.500 0.00 0.00 34.06 3.07
3702 4583 7.658525 TTTCCATATGTAAAAGGTGCATCAT 57.341 32.000 0.00 0.00 34.06 2.45
3703 4584 7.178274 ACTTTTCCATATGTAAAAGGTGCATCA 59.822 33.333 27.33 0.00 43.70 3.07
3704 4585 7.547227 ACTTTTCCATATGTAAAAGGTGCATC 58.453 34.615 27.33 0.00 43.70 3.91
3705 4586 7.397192 AGACTTTTCCATATGTAAAAGGTGCAT 59.603 33.333 27.33 13.16 43.70 3.96
3706 4587 6.719370 AGACTTTTCCATATGTAAAAGGTGCA 59.281 34.615 27.33 0.85 43.70 4.57
3707 4588 7.158099 AGACTTTTCCATATGTAAAAGGTGC 57.842 36.000 27.33 19.13 43.70 5.01
3709 4590 8.957466 GCTTAGACTTTTCCATATGTAAAAGGT 58.043 33.333 27.33 20.05 43.70 3.50
3710 4591 9.178758 AGCTTAGACTTTTCCATATGTAAAAGG 57.821 33.333 27.33 17.79 43.70 3.11
3712 4593 9.733556 TGAGCTTAGACTTTTCCATATGTAAAA 57.266 29.630 6.11 6.11 0.00 1.52
3713 4594 9.162764 GTGAGCTTAGACTTTTCCATATGTAAA 57.837 33.333 1.24 0.00 0.00 2.01
3714 4595 7.769044 GGTGAGCTTAGACTTTTCCATATGTAA 59.231 37.037 1.24 0.00 0.00 2.41
3715 4596 7.093068 TGGTGAGCTTAGACTTTTCCATATGTA 60.093 37.037 1.24 0.00 0.00 2.29
3716 4597 6.116126 GGTGAGCTTAGACTTTTCCATATGT 58.884 40.000 1.24 0.00 0.00 2.29
3717 4598 6.115446 TGGTGAGCTTAGACTTTTCCATATG 58.885 40.000 0.00 0.00 0.00 1.78
3718 4599 6.313519 TGGTGAGCTTAGACTTTTCCATAT 57.686 37.500 0.00 0.00 0.00 1.78
3719 4600 5.755409 TGGTGAGCTTAGACTTTTCCATA 57.245 39.130 0.00 0.00 0.00 2.74
3720 4601 4.640771 TGGTGAGCTTAGACTTTTCCAT 57.359 40.909 0.00 0.00 0.00 3.41
3721 4602 4.579869 GATGGTGAGCTTAGACTTTTCCA 58.420 43.478 0.00 0.00 0.00 3.53
3722 4603 3.619038 CGATGGTGAGCTTAGACTTTTCC 59.381 47.826 0.00 0.00 0.00 3.13
3723 4604 4.495422 TCGATGGTGAGCTTAGACTTTTC 58.505 43.478 0.00 0.00 0.00 2.29
3724 4605 4.537135 TCGATGGTGAGCTTAGACTTTT 57.463 40.909 0.00 0.00 0.00 2.27
3725 4606 4.437239 CATCGATGGTGAGCTTAGACTTT 58.563 43.478 17.96 0.00 0.00 2.66
3726 4607 3.181471 CCATCGATGGTGAGCTTAGACTT 60.181 47.826 32.39 0.00 43.05 3.01
3727 4608 2.363680 CCATCGATGGTGAGCTTAGACT 59.636 50.000 32.39 0.00 43.05 3.24
3728 4609 2.546795 CCCATCGATGGTGAGCTTAGAC 60.547 54.545 36.09 0.00 46.65 2.59
3729 4610 1.688735 CCCATCGATGGTGAGCTTAGA 59.311 52.381 36.09 0.00 46.65 2.10
3730 4611 1.270518 CCCCATCGATGGTGAGCTTAG 60.271 57.143 36.09 21.14 46.65 2.18
3731 4612 0.758734 CCCCATCGATGGTGAGCTTA 59.241 55.000 36.09 0.00 46.65 3.09
3732 4613 1.528824 CCCCATCGATGGTGAGCTT 59.471 57.895 36.09 0.00 46.65 3.74
3733 4614 3.112205 GCCCCATCGATGGTGAGCT 62.112 63.158 36.09 0.00 46.65 4.09
3734 4615 1.758440 TAGCCCCATCGATGGTGAGC 61.758 60.000 36.09 32.64 46.65 4.26
3735 4616 0.979665 ATAGCCCCATCGATGGTGAG 59.020 55.000 36.09 26.38 46.65 3.51
3736 4617 1.072173 CAATAGCCCCATCGATGGTGA 59.928 52.381 36.09 21.40 46.65 4.02
3737 4618 1.527034 CAATAGCCCCATCGATGGTG 58.473 55.000 36.09 29.21 46.65 4.17
3738 4619 0.401738 CCAATAGCCCCATCGATGGT 59.598 55.000 36.09 23.72 46.65 3.55
3740 4621 1.339438 CCTCCAATAGCCCCATCGATG 60.339 57.143 18.76 18.76 0.00 3.84
3741 4622 0.987294 CCTCCAATAGCCCCATCGAT 59.013 55.000 0.00 0.00 0.00 3.59
3742 4623 1.768684 GCCTCCAATAGCCCCATCGA 61.769 60.000 0.00 0.00 0.00 3.59
3743 4624 1.302832 GCCTCCAATAGCCCCATCG 60.303 63.158 0.00 0.00 0.00 3.84
3744 4625 1.302832 CGCCTCCAATAGCCCCATC 60.303 63.158 0.00 0.00 0.00 3.51
3745 4626 1.352622 TTCGCCTCCAATAGCCCCAT 61.353 55.000 0.00 0.00 0.00 4.00
3746 4627 1.567208 TTTCGCCTCCAATAGCCCCA 61.567 55.000 0.00 0.00 0.00 4.96
3747 4628 1.101635 GTTTCGCCTCCAATAGCCCC 61.102 60.000 0.00 0.00 0.00 5.80
3748 4629 0.393808 TGTTTCGCCTCCAATAGCCC 60.394 55.000 0.00 0.00 0.00 5.19
3749 4630 1.401905 CTTGTTTCGCCTCCAATAGCC 59.598 52.381 0.00 0.00 0.00 3.93
3750 4631 1.401905 CCTTGTTTCGCCTCCAATAGC 59.598 52.381 0.00 0.00 0.00 2.97
3751 4632 2.678336 GTCCTTGTTTCGCCTCCAATAG 59.322 50.000 0.00 0.00 0.00 1.73
3752 4633 2.039216 TGTCCTTGTTTCGCCTCCAATA 59.961 45.455 0.00 0.00 0.00 1.90
3753 4634 1.202879 TGTCCTTGTTTCGCCTCCAAT 60.203 47.619 0.00 0.00 0.00 3.16
3754 4635 0.181587 TGTCCTTGTTTCGCCTCCAA 59.818 50.000 0.00 0.00 0.00 3.53
3755 4636 0.181587 TTGTCCTTGTTTCGCCTCCA 59.818 50.000 0.00 0.00 0.00 3.86
3756 4637 1.534729 ATTGTCCTTGTTTCGCCTCC 58.465 50.000 0.00 0.00 0.00 4.30
3757 4638 4.759516 TTTATTGTCCTTGTTTCGCCTC 57.240 40.909 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.