Multiple sequence alignment - TraesCS3A01G020500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G020500 chr3A 100.000 3632 0 0 1 3632 11959970 11956339 0.000000e+00 6708.0
1 TraesCS3A01G020500 chr3A 93.097 1637 101 2 995 2628 12030644 12029017 0.000000e+00 2386.0
2 TraesCS3A01G020500 chr3A 87.685 1624 168 15 1016 2626 11949008 11947404 0.000000e+00 1862.0
3 TraesCS3A01G020500 chr3A 84.436 1542 169 26 1110 2631 12040151 12038661 0.000000e+00 1452.0
4 TraesCS3A01G020500 chr3A 86.364 220 7 9 730 948 12030846 12030649 6.110000e-53 219.0
5 TraesCS3A01G020500 chr3A 98.387 62 1 0 1 62 122512015 122511954 3.830000e-20 110.0
6 TraesCS3A01G020500 chr3D 93.067 2726 153 18 749 3462 8926892 8929593 0.000000e+00 3954.0
7 TraesCS3A01G020500 chr3D 90.999 1911 139 15 728 2626 8911658 8913547 0.000000e+00 2545.0
8 TraesCS3A01G020500 chr3D 87.439 1632 181 16 1007 2625 8935582 8937202 0.000000e+00 1857.0
9 TraesCS3A01G020500 chr3D 87.133 1531 160 18 1121 2631 8887746 8889259 0.000000e+00 1701.0
10 TraesCS3A01G020500 chr3D 84.819 1548 189 19 1104 2631 8892401 8893922 0.000000e+00 1515.0
11 TraesCS3A01G020500 chr3D 92.126 254 16 4 136 386 394053408 394053660 4.460000e-94 355.0
12 TraesCS3A01G020500 chr3D 92.000 250 19 1 137 385 434949718 434949469 2.080000e-92 350.0
13 TraesCS3A01G020500 chr3D 90.171 234 21 2 384 616 333949560 333949328 1.640000e-78 303.0
14 TraesCS3A01G020500 chr3D 89.030 237 26 0 383 619 501069805 501069569 9.860000e-76 294.0
15 TraesCS3A01G020500 chr3D 90.260 154 10 5 3479 3632 8929798 8929946 2.860000e-46 196.0
16 TraesCS3A01G020500 chr3D 91.071 56 3 2 58 113 8926087 8926140 1.400000e-09 75.0
17 TraesCS3A01G020500 chr3D 83.333 84 10 3 3417 3500 590471581 590471502 1.400000e-09 75.0
18 TraesCS3A01G020500 chr3B 93.138 2084 115 10 995 3053 11010241 11008161 0.000000e+00 3031.0
19 TraesCS3A01G020500 chr3B 90.666 1832 126 15 801 2626 10921660 10923452 0.000000e+00 2394.0
20 TraesCS3A01G020500 chr3B 86.826 1632 190 15 1009 2626 10963763 10962143 0.000000e+00 1799.0
21 TraesCS3A01G020500 chr3B 85.336 1548 162 40 1107 2626 11067021 11065511 0.000000e+00 1541.0
22 TraesCS3A01G020500 chr3B 91.905 210 9 4 740 948 11010458 11010256 1.650000e-73 287.0
23 TraesCS3A01G020500 chr3B 96.875 64 2 0 1 64 813391363 813391426 1.380000e-19 108.0
24 TraesCS3A01G020500 chr3B 95.522 67 2 1 1 67 55047782 55047717 4.960000e-19 106.0
25 TraesCS3A01G020500 chr1B 79.472 833 132 28 1275 2094 540154684 540155490 4.100000e-154 555.0
26 TraesCS3A01G020500 chr1D 79.277 830 139 24 1275 2094 402294441 402295247 1.910000e-152 549.0
27 TraesCS3A01G020500 chr1D 84.690 516 76 3 2112 2625 402295297 402295811 2.500000e-141 512.0
28 TraesCS3A01G020500 chr1D 90.984 244 21 1 145 387 425101608 425101365 9.720000e-86 327.0
29 TraesCS3A01G020500 chr1D 75.332 377 81 11 2147 2518 199276901 199276532 1.730000e-38 171.0
30 TraesCS3A01G020500 chr1D 84.884 86 7 6 3417 3500 399327225 399327306 8.360000e-12 82.4
31 TraesCS3A01G020500 chr1A 79.302 831 131 31 1275 2094 497760842 497761642 8.870000e-151 544.0
32 TraesCS3A01G020500 chr1A 83.789 512 80 3 2112 2621 497761692 497762202 1.960000e-132 483.0
33 TraesCS3A01G020500 chr1A 75.332 377 81 11 2147 2518 250443146 250442777 1.730000e-38 171.0
34 TraesCS3A01G020500 chr7D 90.734 259 22 2 136 392 239629028 239628770 9.660000e-91 344.0
35 TraesCS3A01G020500 chr7D 91.235 251 21 1 136 385 568468076 568468326 1.250000e-89 340.0
36 TraesCS3A01G020500 chr7D 87.952 83 8 2 1 81 186447518 186447600 2.990000e-16 97.1
37 TraesCS3A01G020500 chr5A 91.600 250 19 2 137 385 656675382 656675630 9.660000e-91 344.0
38 TraesCS3A01G020500 chr5A 100.000 59 0 0 1 59 585492461 585492519 3.830000e-20 110.0
39 TraesCS3A01G020500 chr5A 86.022 93 4 7 3417 3505 454707970 454707883 1.390000e-14 91.6
40 TraesCS3A01G020500 chr5A 83.721 86 9 3 3416 3500 35988938 35989019 3.890000e-10 76.8
41 TraesCS3A01G020500 chr6B 90.945 254 21 2 136 387 460488526 460488779 1.250000e-89 340.0
42 TraesCS3A01G020500 chr6B 90.514 253 22 2 136 386 324256333 324256585 2.090000e-87 333.0
43 TraesCS3A01G020500 chr6B 89.831 236 24 0 384 619 251605734 251605499 1.640000e-78 303.0
44 TraesCS3A01G020500 chr6B 83.158 95 5 9 3417 3505 68202879 68202790 3.890000e-10 76.8
45 TraesCS3A01G020500 chr6D 90.873 252 21 2 136 385 336989295 336989546 1.620000e-88 337.0
46 TraesCS3A01G020500 chr6D 98.413 63 0 1 1 63 412737480 412737541 3.830000e-20 110.0
47 TraesCS3A01G020500 chr6D 85.714 84 5 5 3419 3500 50635426 50635348 8.360000e-12 82.4
48 TraesCS3A01G020500 chr6D 88.889 63 6 1 3417 3478 32383827 32383765 3.890000e-10 76.8
49 TraesCS3A01G020500 chr6D 83.529 85 9 5 3417 3500 79892501 79892421 1.400000e-09 75.0
50 TraesCS3A01G020500 chr6D 89.286 56 5 1 3411 3465 60551760 60551705 6.510000e-08 69.4
51 TraesCS3A01G020500 chr7B 89.787 235 24 0 384 618 692711989 692711755 5.890000e-78 302.0
52 TraesCS3A01G020500 chr7B 95.455 66 3 0 1 66 648166957 648167022 4.960000e-19 106.0
53 TraesCS3A01G020500 chr7B 92.188 64 3 2 3413 3475 630432450 630432388 5.000000e-14 89.8
54 TraesCS3A01G020500 chr2D 89.451 237 24 1 384 620 299554948 299555183 7.620000e-77 298.0
55 TraesCS3A01G020500 chr2D 84.884 86 7 4 3417 3500 65687711 65687792 8.360000e-12 82.4
56 TraesCS3A01G020500 chr2D 83.908 87 6 6 3417 3500 196887305 196887386 3.890000e-10 76.8
57 TraesCS3A01G020500 chr2A 89.362 235 25 0 384 618 206221075 206220841 2.740000e-76 296.0
58 TraesCS3A01G020500 chr2A 83.871 93 8 6 3417 3506 120720070 120720158 8.360000e-12 82.4
59 TraesCS3A01G020500 chr7A 89.030 237 26 0 384 620 638749862 638749626 9.860000e-76 294.0
60 TraesCS3A01G020500 chr5B 89.030 237 26 0 384 620 345928687 345928451 9.860000e-76 294.0
61 TraesCS3A01G020500 chr4B 88.843 242 22 5 384 621 462206394 462206154 3.550000e-75 292.0
62 TraesCS3A01G020500 chr5D 96.923 65 1 1 1 64 555497827 555497891 1.380000e-19 108.0
63 TraesCS3A01G020500 chr4A 91.892 74 5 1 1 74 708327891 708327963 6.420000e-18 102.0
64 TraesCS3A01G020500 chr6A 90.625 64 4 2 3417 3478 36727680 36727617 2.320000e-12 84.2
65 TraesCS3A01G020500 chrUn 89.394 66 6 1 3414 3478 22245425 22245490 8.360000e-12 82.4
66 TraesCS3A01G020500 chrUn 89.394 66 6 1 3414 3478 22247971 22248036 8.360000e-12 82.4
67 TraesCS3A01G020500 chrUn 89.394 66 6 1 3414 3478 22252434 22252499 8.360000e-12 82.4
68 TraesCS3A01G020500 chrUn 91.379 58 3 2 3423 3478 238092922 238092865 1.080000e-10 78.7
69 TraesCS3A01G020500 chr4D 83.721 86 7 5 3417 3500 36481847 36481767 1.400000e-09 75.0
70 TraesCS3A01G020500 chr4D 86.765 68 8 1 3410 3477 76597667 76597733 1.400000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G020500 chr3A 11956339 11959970 3631 True 6708.000000 6708 100.0000 1 3632 1 chr3A.!!$R2 3631
1 TraesCS3A01G020500 chr3A 11947404 11949008 1604 True 1862.000000 1862 87.6850 1016 2626 1 chr3A.!!$R1 1610
2 TraesCS3A01G020500 chr3A 12038661 12040151 1490 True 1452.000000 1452 84.4360 1110 2631 1 chr3A.!!$R3 1521
3 TraesCS3A01G020500 chr3A 12029017 12030846 1829 True 1302.500000 2386 89.7305 730 2628 2 chr3A.!!$R5 1898
4 TraesCS3A01G020500 chr3D 8911658 8913547 1889 False 2545.000000 2545 90.9990 728 2626 1 chr3D.!!$F1 1898
5 TraesCS3A01G020500 chr3D 8935582 8937202 1620 False 1857.000000 1857 87.4390 1007 2625 1 chr3D.!!$F2 1618
6 TraesCS3A01G020500 chr3D 8887746 8893922 6176 False 1608.000000 1701 85.9760 1104 2631 2 chr3D.!!$F4 1527
7 TraesCS3A01G020500 chr3D 8926087 8929946 3859 False 1408.333333 3954 91.4660 58 3632 3 chr3D.!!$F5 3574
8 TraesCS3A01G020500 chr3B 10921660 10923452 1792 False 2394.000000 2394 90.6660 801 2626 1 chr3B.!!$F1 1825
9 TraesCS3A01G020500 chr3B 10962143 10963763 1620 True 1799.000000 1799 86.8260 1009 2626 1 chr3B.!!$R1 1617
10 TraesCS3A01G020500 chr3B 11008161 11010458 2297 True 1659.000000 3031 92.5215 740 3053 2 chr3B.!!$R4 2313
11 TraesCS3A01G020500 chr3B 11065511 11067021 1510 True 1541.000000 1541 85.3360 1107 2626 1 chr3B.!!$R2 1519
12 TraesCS3A01G020500 chr1B 540154684 540155490 806 False 555.000000 555 79.4720 1275 2094 1 chr1B.!!$F1 819
13 TraesCS3A01G020500 chr1D 402294441 402295811 1370 False 530.500000 549 81.9835 1275 2625 2 chr1D.!!$F2 1350
14 TraesCS3A01G020500 chr1A 497760842 497762202 1360 False 513.500000 544 81.5455 1275 2621 2 chr1A.!!$F1 1346

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 377 0.109412 GTACACTCTTCACCGGACGG 60.109 60.0 9.46 9.56 42.03 4.79 F
377 378 0.250858 TACACTCTTCACCGGACGGA 60.251 55.0 18.80 0.00 38.96 4.69 F
613 614 0.400594 AAACTCCCACTACCACCAGC 59.599 55.0 0.00 0.00 0.00 4.85 F
796 1411 0.823356 AAGACTTTGCCACCGTGCAT 60.823 50.0 0.00 0.00 41.70 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1227 1877 1.155889 CTGATTGTTGCACGCTGGTA 58.844 50.000 0.00 0.0 0.00 3.25 R
1854 2516 2.997315 CTGGCCTCGGTGGTGAGA 60.997 66.667 3.32 0.0 38.28 3.27 R
2448 3146 0.227735 CGTCGAACGCGTCTTTGAAA 59.772 50.000 14.44 0.0 38.98 2.69 R
2758 3466 3.769739 TTGCATCGTATGGCTAGGATT 57.230 42.857 0.00 0.0 31.68 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.924290 GAGTTGGACTCGATGTTACTGC 59.076 50.000 0.00 0.00 35.28 4.40
32 33 2.563179 AGTTGGACTCGATGTTACTGCT 59.437 45.455 0.00 0.00 0.00 4.24
33 34 2.654749 TGGACTCGATGTTACTGCTG 57.345 50.000 0.00 0.00 0.00 4.41
34 35 2.167662 TGGACTCGATGTTACTGCTGA 58.832 47.619 0.00 0.00 0.00 4.26
35 36 2.560981 TGGACTCGATGTTACTGCTGAA 59.439 45.455 0.00 0.00 0.00 3.02
36 37 3.182967 GGACTCGATGTTACTGCTGAAG 58.817 50.000 0.00 0.00 0.00 3.02
37 38 3.367498 GGACTCGATGTTACTGCTGAAGT 60.367 47.826 0.00 0.00 43.40 3.01
38 39 4.238514 GACTCGATGTTACTGCTGAAGTT 58.761 43.478 0.00 0.00 40.56 2.66
39 40 5.386958 ACTCGATGTTACTGCTGAAGTTA 57.613 39.130 0.00 0.00 40.56 2.24
40 41 5.162075 ACTCGATGTTACTGCTGAAGTTAC 58.838 41.667 0.00 0.00 40.56 2.50
41 42 5.047943 ACTCGATGTTACTGCTGAAGTTACT 60.048 40.000 6.50 0.00 38.87 2.24
42 43 5.399858 TCGATGTTACTGCTGAAGTTACTC 58.600 41.667 6.50 1.79 38.87 2.59
43 44 4.563184 CGATGTTACTGCTGAAGTTACTCC 59.437 45.833 6.50 0.00 38.87 3.85
44 45 4.267349 TGTTACTGCTGAAGTTACTCCC 57.733 45.455 6.50 0.00 38.87 4.30
45 46 3.644265 TGTTACTGCTGAAGTTACTCCCA 59.356 43.478 6.50 0.00 38.87 4.37
46 47 4.286032 TGTTACTGCTGAAGTTACTCCCAT 59.714 41.667 6.50 0.00 38.87 4.00
47 48 5.221843 TGTTACTGCTGAAGTTACTCCCATT 60.222 40.000 6.50 0.00 38.87 3.16
48 49 3.679389 ACTGCTGAAGTTACTCCCATTG 58.321 45.455 0.00 0.00 34.57 2.82
49 50 3.073062 ACTGCTGAAGTTACTCCCATTGT 59.927 43.478 0.00 0.00 34.57 2.71
50 51 3.411446 TGCTGAAGTTACTCCCATTGTG 58.589 45.455 0.00 0.00 0.00 3.33
51 52 2.749621 GCTGAAGTTACTCCCATTGTGG 59.250 50.000 0.00 0.00 37.25 4.17
52 53 2.749621 CTGAAGTTACTCCCATTGTGGC 59.250 50.000 0.00 0.00 35.79 5.01
53 54 2.375174 TGAAGTTACTCCCATTGTGGCT 59.625 45.455 0.00 0.00 35.79 4.75
54 55 3.585289 TGAAGTTACTCCCATTGTGGCTA 59.415 43.478 0.00 0.00 35.79 3.93
55 56 3.914426 AGTTACTCCCATTGTGGCTAG 57.086 47.619 0.00 0.00 35.79 3.42
56 57 3.182152 AGTTACTCCCATTGTGGCTAGT 58.818 45.455 7.20 7.20 35.79 2.57
57 58 3.197983 AGTTACTCCCATTGTGGCTAGTC 59.802 47.826 5.75 0.00 35.79 2.59
58 59 1.958288 ACTCCCATTGTGGCTAGTCT 58.042 50.000 0.00 0.00 35.79 3.24
59 60 1.834263 ACTCCCATTGTGGCTAGTCTC 59.166 52.381 0.00 0.00 35.79 3.36
60 61 1.833630 CTCCCATTGTGGCTAGTCTCA 59.166 52.381 0.00 0.00 35.79 3.27
61 62 2.237143 CTCCCATTGTGGCTAGTCTCAA 59.763 50.000 13.70 13.70 35.79 3.02
62 63 2.237143 TCCCATTGTGGCTAGTCTCAAG 59.763 50.000 16.13 9.00 35.79 3.02
63 64 2.237143 CCCATTGTGGCTAGTCTCAAGA 59.763 50.000 16.13 0.00 35.79 3.02
64 65 3.118112 CCCATTGTGGCTAGTCTCAAGAT 60.118 47.826 16.13 0.00 35.79 2.40
65 66 3.875727 CCATTGTGGCTAGTCTCAAGATG 59.124 47.826 16.13 10.74 0.00 2.90
66 67 4.383444 CCATTGTGGCTAGTCTCAAGATGA 60.383 45.833 16.13 0.00 0.00 2.92
67 68 5.366460 CATTGTGGCTAGTCTCAAGATGAT 58.634 41.667 16.13 0.00 0.00 2.45
68 69 4.397481 TGTGGCTAGTCTCAAGATGATG 57.603 45.455 0.00 0.00 0.00 3.07
99 100 7.292356 TGTGGCTTCCCTCTAAGATGAATAATA 59.708 37.037 0.00 0.00 0.00 0.98
102 103 8.598041 GGCTTCCCTCTAAGATGAATAATAAGA 58.402 37.037 0.00 0.00 0.00 2.10
122 123 9.825109 AATAAGACTATGACTTTTCTCTAAGGC 57.175 33.333 0.00 0.00 33.57 4.35
123 124 7.489239 AAGACTATGACTTTTCTCTAAGGCT 57.511 36.000 0.00 0.00 34.12 4.58
124 125 6.872920 AGACTATGACTTTTCTCTAAGGCTG 58.127 40.000 0.00 0.00 34.12 4.85
125 126 5.983540 ACTATGACTTTTCTCTAAGGCTGG 58.016 41.667 0.00 0.00 34.12 4.85
126 127 4.917906 ATGACTTTTCTCTAAGGCTGGT 57.082 40.909 0.00 0.00 34.12 4.00
127 128 4.706842 TGACTTTTCTCTAAGGCTGGTT 57.293 40.909 0.00 0.00 34.12 3.67
128 129 4.389374 TGACTTTTCTCTAAGGCTGGTTG 58.611 43.478 0.00 0.00 34.12 3.77
129 130 4.141482 TGACTTTTCTCTAAGGCTGGTTGT 60.141 41.667 0.00 0.00 34.12 3.32
130 131 5.071250 TGACTTTTCTCTAAGGCTGGTTGTA 59.929 40.000 0.00 0.00 34.12 2.41
131 132 5.937111 ACTTTTCTCTAAGGCTGGTTGTAA 58.063 37.500 0.00 0.00 0.00 2.41
132 133 6.543735 ACTTTTCTCTAAGGCTGGTTGTAAT 58.456 36.000 0.00 0.00 0.00 1.89
133 134 6.431234 ACTTTTCTCTAAGGCTGGTTGTAATG 59.569 38.462 0.00 0.00 0.00 1.90
134 135 4.487714 TCTCTAAGGCTGGTTGTAATGG 57.512 45.455 0.00 0.00 0.00 3.16
135 136 3.199946 TCTCTAAGGCTGGTTGTAATGGG 59.800 47.826 0.00 0.00 0.00 4.00
136 137 2.241176 TCTAAGGCTGGTTGTAATGGGG 59.759 50.000 0.00 0.00 0.00 4.96
137 138 1.080638 AAGGCTGGTTGTAATGGGGA 58.919 50.000 0.00 0.00 0.00 4.81
138 139 0.625849 AGGCTGGTTGTAATGGGGAG 59.374 55.000 0.00 0.00 0.00 4.30
139 140 0.331616 GGCTGGTTGTAATGGGGAGT 59.668 55.000 0.00 0.00 0.00 3.85
140 141 1.463674 GCTGGTTGTAATGGGGAGTG 58.536 55.000 0.00 0.00 0.00 3.51
141 142 1.004277 GCTGGTTGTAATGGGGAGTGA 59.996 52.381 0.00 0.00 0.00 3.41
142 143 2.554344 GCTGGTTGTAATGGGGAGTGAA 60.554 50.000 0.00 0.00 0.00 3.18
143 144 3.761897 CTGGTTGTAATGGGGAGTGAAA 58.238 45.455 0.00 0.00 0.00 2.69
144 145 4.344104 CTGGTTGTAATGGGGAGTGAAAT 58.656 43.478 0.00 0.00 0.00 2.17
145 146 5.505780 CTGGTTGTAATGGGGAGTGAAATA 58.494 41.667 0.00 0.00 0.00 1.40
146 147 5.893500 TGGTTGTAATGGGGAGTGAAATAA 58.106 37.500 0.00 0.00 0.00 1.40
147 148 6.315714 TGGTTGTAATGGGGAGTGAAATAAA 58.684 36.000 0.00 0.00 0.00 1.40
148 149 6.782988 TGGTTGTAATGGGGAGTGAAATAAAA 59.217 34.615 0.00 0.00 0.00 1.52
149 150 7.290248 TGGTTGTAATGGGGAGTGAAATAAAAA 59.710 33.333 0.00 0.00 0.00 1.94
170 171 3.874392 ATGCATTGGAAAGGTGTAAGC 57.126 42.857 0.00 0.00 0.00 3.09
171 172 1.892474 TGCATTGGAAAGGTGTAAGCC 59.108 47.619 0.00 0.00 32.25 4.35
172 173 1.892474 GCATTGGAAAGGTGTAAGCCA 59.108 47.619 0.00 0.00 32.25 4.75
173 174 2.352715 GCATTGGAAAGGTGTAAGCCAC 60.353 50.000 0.00 0.00 43.74 5.01
183 184 3.618690 GTGTAAGCCACCATCTCTCTT 57.381 47.619 0.00 0.00 38.18 2.85
184 185 3.526534 GTGTAAGCCACCATCTCTCTTC 58.473 50.000 0.00 0.00 38.18 2.87
185 186 3.196685 GTGTAAGCCACCATCTCTCTTCT 59.803 47.826 0.00 0.00 38.18 2.85
186 187 3.449018 TGTAAGCCACCATCTCTCTTCTC 59.551 47.826 0.00 0.00 0.00 2.87
187 188 2.548464 AGCCACCATCTCTCTTCTCT 57.452 50.000 0.00 0.00 0.00 3.10
188 189 2.831565 AGCCACCATCTCTCTTCTCTT 58.168 47.619 0.00 0.00 0.00 2.85
189 190 3.180507 AGCCACCATCTCTCTTCTCTTT 58.819 45.455 0.00 0.00 0.00 2.52
190 191 4.357325 AGCCACCATCTCTCTTCTCTTTA 58.643 43.478 0.00 0.00 0.00 1.85
191 192 4.780021 AGCCACCATCTCTCTTCTCTTTAA 59.220 41.667 0.00 0.00 0.00 1.52
192 193 5.428131 AGCCACCATCTCTCTTCTCTTTAAT 59.572 40.000 0.00 0.00 0.00 1.40
193 194 6.069731 AGCCACCATCTCTCTTCTCTTTAATT 60.070 38.462 0.00 0.00 0.00 1.40
194 195 7.126421 AGCCACCATCTCTCTTCTCTTTAATTA 59.874 37.037 0.00 0.00 0.00 1.40
195 196 7.225734 GCCACCATCTCTCTTCTCTTTAATTAC 59.774 40.741 0.00 0.00 0.00 1.89
196 197 7.713073 CCACCATCTCTCTTCTCTTTAATTACC 59.287 40.741 0.00 0.00 0.00 2.85
197 198 7.713073 CACCATCTCTCTTCTCTTTAATTACCC 59.287 40.741 0.00 0.00 0.00 3.69
198 199 7.403231 ACCATCTCTCTTCTCTTTAATTACCCA 59.597 37.037 0.00 0.00 0.00 4.51
199 200 8.267894 CCATCTCTCTTCTCTTTAATTACCCAA 58.732 37.037 0.00 0.00 0.00 4.12
200 201 9.103861 CATCTCTCTTCTCTTTAATTACCCAAC 57.896 37.037 0.00 0.00 0.00 3.77
201 202 7.621796 TCTCTCTTCTCTTTAATTACCCAACC 58.378 38.462 0.00 0.00 0.00 3.77
202 203 7.458170 TCTCTCTTCTCTTTAATTACCCAACCT 59.542 37.037 0.00 0.00 0.00 3.50
203 204 7.985589 TCTCTTCTCTTTAATTACCCAACCTT 58.014 34.615 0.00 0.00 0.00 3.50
204 205 8.101419 TCTCTTCTCTTTAATTACCCAACCTTC 58.899 37.037 0.00 0.00 0.00 3.46
205 206 7.751646 TCTTCTCTTTAATTACCCAACCTTCA 58.248 34.615 0.00 0.00 0.00 3.02
206 207 8.221944 TCTTCTCTTTAATTACCCAACCTTCAA 58.778 33.333 0.00 0.00 0.00 2.69
207 208 8.950007 TTCTCTTTAATTACCCAACCTTCAAT 57.050 30.769 0.00 0.00 0.00 2.57
208 209 8.348285 TCTCTTTAATTACCCAACCTTCAATG 57.652 34.615 0.00 0.00 0.00 2.82
209 210 8.167392 TCTCTTTAATTACCCAACCTTCAATGA 58.833 33.333 0.00 0.00 0.00 2.57
210 211 8.713708 TCTTTAATTACCCAACCTTCAATGAA 57.286 30.769 0.00 0.00 0.00 2.57
211 212 8.581578 TCTTTAATTACCCAACCTTCAATGAAC 58.418 33.333 0.00 0.00 0.00 3.18
212 213 8.485578 TTTAATTACCCAACCTTCAATGAACT 57.514 30.769 0.00 0.00 0.00 3.01
213 214 9.589461 TTTAATTACCCAACCTTCAATGAACTA 57.411 29.630 0.00 0.00 0.00 2.24
214 215 9.589461 TTAATTACCCAACCTTCAATGAACTAA 57.411 29.630 0.00 0.00 0.00 2.24
215 216 7.703058 ATTACCCAACCTTCAATGAACTAAG 57.297 36.000 0.00 0.00 0.00 2.18
216 217 5.061721 ACCCAACCTTCAATGAACTAAGT 57.938 39.130 0.00 0.00 0.00 2.24
217 218 4.827284 ACCCAACCTTCAATGAACTAAGTG 59.173 41.667 0.00 0.00 0.00 3.16
218 219 4.321230 CCCAACCTTCAATGAACTAAGTGC 60.321 45.833 0.00 0.00 0.00 4.40
219 220 4.278170 CCAACCTTCAATGAACTAAGTGCA 59.722 41.667 0.00 0.00 0.00 4.57
220 221 5.047802 CCAACCTTCAATGAACTAAGTGCAT 60.048 40.000 0.00 0.00 32.34 3.96
221 222 5.633830 ACCTTCAATGAACTAAGTGCATG 57.366 39.130 0.00 0.00 31.26 4.06
222 223 5.072741 ACCTTCAATGAACTAAGTGCATGT 58.927 37.500 0.00 0.00 31.26 3.21
223 224 6.237901 ACCTTCAATGAACTAAGTGCATGTA 58.762 36.000 0.00 0.00 31.26 2.29
224 225 6.149474 ACCTTCAATGAACTAAGTGCATGTAC 59.851 38.462 5.71 5.71 31.26 2.90
225 226 6.149308 CCTTCAATGAACTAAGTGCATGTACA 59.851 38.462 16.62 0.00 31.26 2.90
226 227 7.308529 CCTTCAATGAACTAAGTGCATGTACAA 60.309 37.037 16.62 2.93 31.26 2.41
227 228 7.503521 TCAATGAACTAAGTGCATGTACAAA 57.496 32.000 16.62 2.57 31.26 2.83
228 229 8.109705 TCAATGAACTAAGTGCATGTACAAAT 57.890 30.769 16.62 4.60 31.26 2.32
229 230 8.575589 TCAATGAACTAAGTGCATGTACAAATT 58.424 29.630 16.62 4.56 31.26 1.82
230 231 9.838975 CAATGAACTAAGTGCATGTACAAATTA 57.161 29.630 16.62 5.47 31.26 1.40
233 234 9.278978 TGAACTAAGTGCATGTACAAATTAAGA 57.721 29.630 16.62 0.00 0.00 2.10
236 237 9.502091 ACTAAGTGCATGTACAAATTAAGAAGA 57.498 29.630 16.62 0.00 0.00 2.87
237 238 9.760660 CTAAGTGCATGTACAAATTAAGAAGAC 57.239 33.333 16.62 0.00 0.00 3.01
238 239 7.145932 AGTGCATGTACAAATTAAGAAGACC 57.854 36.000 16.62 0.00 0.00 3.85
239 240 6.714810 AGTGCATGTACAAATTAAGAAGACCA 59.285 34.615 16.62 0.00 0.00 4.02
240 241 7.394359 AGTGCATGTACAAATTAAGAAGACCAT 59.606 33.333 16.62 0.00 0.00 3.55
241 242 7.485913 GTGCATGTACAAATTAAGAAGACCATG 59.514 37.037 9.26 0.00 0.00 3.66
242 243 7.176515 TGCATGTACAAATTAAGAAGACCATGT 59.823 33.333 0.00 0.00 0.00 3.21
243 244 7.485913 GCATGTACAAATTAAGAAGACCATGTG 59.514 37.037 0.00 0.00 0.00 3.21
244 245 8.514594 CATGTACAAATTAAGAAGACCATGTGT 58.485 33.333 0.00 0.00 0.00 3.72
245 246 9.733556 ATGTACAAATTAAGAAGACCATGTGTA 57.266 29.630 0.00 0.00 0.00 2.90
246 247 9.214957 TGTACAAATTAAGAAGACCATGTGTAG 57.785 33.333 0.00 0.00 0.00 2.74
247 248 9.431887 GTACAAATTAAGAAGACCATGTGTAGA 57.568 33.333 0.00 0.00 0.00 2.59
249 250 9.520515 ACAAATTAAGAAGACCATGTGTAGATT 57.479 29.630 0.00 0.00 0.00 2.40
250 251 9.778993 CAAATTAAGAAGACCATGTGTAGATTG 57.221 33.333 0.00 0.00 0.00 2.67
251 252 9.520515 AAATTAAGAAGACCATGTGTAGATTGT 57.479 29.630 0.00 0.00 0.00 2.71
252 253 9.520515 AATTAAGAAGACCATGTGTAGATTGTT 57.479 29.630 0.00 0.00 0.00 2.83
256 257 8.498054 AGAAGACCATGTGTAGATTGTTATTG 57.502 34.615 0.00 0.00 0.00 1.90
257 258 7.554118 AGAAGACCATGTGTAGATTGTTATTGG 59.446 37.037 0.00 0.00 0.00 3.16
258 259 6.721318 AGACCATGTGTAGATTGTTATTGGT 58.279 36.000 0.00 0.00 0.00 3.67
259 260 6.823689 AGACCATGTGTAGATTGTTATTGGTC 59.176 38.462 9.64 9.64 40.63 4.02
260 261 6.721318 ACCATGTGTAGATTGTTATTGGTCT 58.279 36.000 0.00 0.00 0.00 3.85
261 262 7.175104 ACCATGTGTAGATTGTTATTGGTCTT 58.825 34.615 0.00 0.00 0.00 3.01
262 263 7.121168 ACCATGTGTAGATTGTTATTGGTCTTG 59.879 37.037 0.00 0.00 0.00 3.02
263 264 7.336679 CCATGTGTAGATTGTTATTGGTCTTGA 59.663 37.037 0.00 0.00 0.00 3.02
264 265 8.896744 CATGTGTAGATTGTTATTGGTCTTGAT 58.103 33.333 0.00 0.00 0.00 2.57
265 266 8.862325 TGTGTAGATTGTTATTGGTCTTGATT 57.138 30.769 0.00 0.00 0.00 2.57
266 267 9.952030 TGTGTAGATTGTTATTGGTCTTGATTA 57.048 29.630 0.00 0.00 0.00 1.75
270 271 8.964476 AGATTGTTATTGGTCTTGATTATCGT 57.036 30.769 0.00 0.00 0.00 3.73
271 272 8.830580 AGATTGTTATTGGTCTTGATTATCGTG 58.169 33.333 0.00 0.00 0.00 4.35
272 273 7.915293 TTGTTATTGGTCTTGATTATCGTGT 57.085 32.000 0.00 0.00 0.00 4.49
273 274 9.607988 ATTGTTATTGGTCTTGATTATCGTGTA 57.392 29.630 0.00 0.00 0.00 2.90
274 275 9.438228 TTGTTATTGGTCTTGATTATCGTGTAA 57.562 29.630 0.00 0.00 0.00 2.41
275 276 9.607988 TGTTATTGGTCTTGATTATCGTGTAAT 57.392 29.630 0.00 0.00 0.00 1.89
276 277 9.864034 GTTATTGGTCTTGATTATCGTGTAATG 57.136 33.333 1.56 0.00 0.00 1.90
277 278 9.825109 TTATTGGTCTTGATTATCGTGTAATGA 57.175 29.630 1.56 0.00 35.53 2.57
278 279 7.770801 TTGGTCTTGATTATCGTGTAATGAG 57.229 36.000 1.56 1.19 33.81 2.90
279 280 6.280643 TGGTCTTGATTATCGTGTAATGAGG 58.719 40.000 1.56 0.00 33.81 3.86
280 281 5.696724 GGTCTTGATTATCGTGTAATGAGGG 59.303 44.000 1.56 0.00 33.81 4.30
281 282 6.462487 GGTCTTGATTATCGTGTAATGAGGGA 60.462 42.308 1.56 0.00 33.81 4.20
282 283 6.642950 GTCTTGATTATCGTGTAATGAGGGAG 59.357 42.308 1.56 0.00 33.81 4.30
283 284 6.549736 TCTTGATTATCGTGTAATGAGGGAGA 59.450 38.462 1.56 0.00 33.81 3.71
284 285 6.724893 TGATTATCGTGTAATGAGGGAGAA 57.275 37.500 1.56 0.00 33.81 2.87
285 286 7.119709 TGATTATCGTGTAATGAGGGAGAAA 57.880 36.000 1.56 0.00 33.81 2.52
286 287 7.735917 TGATTATCGTGTAATGAGGGAGAAAT 58.264 34.615 1.56 0.00 33.81 2.17
287 288 8.866093 TGATTATCGTGTAATGAGGGAGAAATA 58.134 33.333 1.56 0.00 33.81 1.40
288 289 9.877178 GATTATCGTGTAATGAGGGAGAAATAT 57.123 33.333 1.56 0.00 33.81 1.28
291 292 8.980481 ATCGTGTAATGAGGGAGAAATATTTT 57.020 30.769 1.43 0.00 33.81 1.82
292 293 8.801882 TCGTGTAATGAGGGAGAAATATTTTT 57.198 30.769 1.43 0.00 0.00 1.94
326 327 8.579850 AAGTGCATTGGAAAGATAGAAATACA 57.420 30.769 0.00 0.00 0.00 2.29
327 328 7.989826 AGTGCATTGGAAAGATAGAAATACAC 58.010 34.615 0.00 0.00 0.00 2.90
328 329 7.831193 AGTGCATTGGAAAGATAGAAATACACT 59.169 33.333 0.00 0.00 32.54 3.55
329 330 8.125448 GTGCATTGGAAAGATAGAAATACACTC 58.875 37.037 0.00 0.00 0.00 3.51
330 331 8.049117 TGCATTGGAAAGATAGAAATACACTCT 58.951 33.333 0.00 0.00 0.00 3.24
331 332 8.897752 GCATTGGAAAGATAGAAATACACTCTT 58.102 33.333 0.00 0.00 0.00 2.85
335 336 9.793259 TGGAAAGATAGAAATACACTCTTTTGT 57.207 29.630 0.00 0.00 36.56 2.83
338 339 9.793259 AAAGATAGAAATACACTCTTTTGTGGA 57.207 29.630 0.00 0.00 41.84 4.02
339 340 8.779354 AGATAGAAATACACTCTTTTGTGGAC 57.221 34.615 0.00 0.00 41.84 4.02
340 341 8.375506 AGATAGAAATACACTCTTTTGTGGACA 58.624 33.333 0.00 0.00 41.84 4.02
341 342 8.918202 ATAGAAATACACTCTTTTGTGGACAA 57.082 30.769 0.00 0.00 41.84 3.18
342 343 7.639113 AGAAATACACTCTTTTGTGGACAAA 57.361 32.000 0.70 0.70 43.36 2.83
343 344 8.237811 AGAAATACACTCTTTTGTGGACAAAT 57.762 30.769 5.80 0.00 44.30 2.32
344 345 8.695456 AGAAATACACTCTTTTGTGGACAAATT 58.305 29.630 5.80 0.00 44.30 1.82
345 346 9.313118 GAAATACACTCTTTTGTGGACAAATTT 57.687 29.630 5.80 1.80 44.30 1.82
346 347 9.665719 AAATACACTCTTTTGTGGACAAATTTT 57.334 25.926 5.80 0.00 44.30 1.82
347 348 6.966435 ACACTCTTTTGTGGACAAATTTTG 57.034 33.333 7.59 7.59 44.30 2.44
348 349 6.696411 ACACTCTTTTGTGGACAAATTTTGA 58.304 32.000 15.81 2.89 44.30 2.69
349 350 7.158021 ACACTCTTTTGTGGACAAATTTTGAA 58.842 30.769 15.81 0.00 44.30 2.69
350 351 7.331687 ACACTCTTTTGTGGACAAATTTTGAAG 59.668 33.333 15.81 7.05 44.30 3.02
351 352 6.313658 ACTCTTTTGTGGACAAATTTTGAAGC 59.686 34.615 15.81 4.84 44.30 3.86
352 353 5.584251 TCTTTTGTGGACAAATTTTGAAGCC 59.416 36.000 15.81 12.95 44.30 4.35
353 354 4.478206 TTGTGGACAAATTTTGAAGCCA 57.522 36.364 15.81 15.02 32.11 4.75
354 355 4.478206 TGTGGACAAATTTTGAAGCCAA 57.522 36.364 15.81 8.03 34.01 4.52
355 356 4.836825 TGTGGACAAATTTTGAAGCCAAA 58.163 34.783 15.81 11.32 40.24 3.28
356 357 5.435291 TGTGGACAAATTTTGAAGCCAAAT 58.565 33.333 15.81 0.00 41.43 2.32
357 358 5.296283 TGTGGACAAATTTTGAAGCCAAATG 59.704 36.000 15.81 0.00 41.43 2.32
358 359 5.296531 GTGGACAAATTTTGAAGCCAAATGT 59.703 36.000 15.81 0.00 41.43 2.71
359 360 6.481644 GTGGACAAATTTTGAAGCCAAATGTA 59.518 34.615 15.81 0.00 41.43 2.29
360 361 6.481644 TGGACAAATTTTGAAGCCAAATGTAC 59.518 34.615 15.81 0.00 41.43 2.90
361 362 6.481644 GGACAAATTTTGAAGCCAAATGTACA 59.518 34.615 15.81 0.00 41.43 2.90
362 363 7.245419 ACAAATTTTGAAGCCAAATGTACAC 57.755 32.000 15.81 0.00 41.43 2.90
363 364 7.047271 ACAAATTTTGAAGCCAAATGTACACT 58.953 30.769 15.81 0.00 41.43 3.55
364 365 7.224557 ACAAATTTTGAAGCCAAATGTACACTC 59.775 33.333 15.81 0.00 41.43 3.51
365 366 6.655078 ATTTTGAAGCCAAATGTACACTCT 57.345 33.333 0.00 0.00 41.43 3.24
366 367 6.463995 TTTTGAAGCCAAATGTACACTCTT 57.536 33.333 0.00 0.00 41.43 2.85
367 368 5.689383 TTGAAGCCAAATGTACACTCTTC 57.311 39.130 0.00 7.46 0.00 2.87
368 369 4.713553 TGAAGCCAAATGTACACTCTTCA 58.286 39.130 16.38 16.38 36.93 3.02
369 370 4.515191 TGAAGCCAAATGTACACTCTTCAC 59.485 41.667 16.38 2.08 35.12 3.18
370 371 3.412386 AGCCAAATGTACACTCTTCACC 58.588 45.455 0.00 0.00 0.00 4.02
371 372 2.159627 GCCAAATGTACACTCTTCACCG 59.840 50.000 0.00 0.00 0.00 4.94
372 373 2.742053 CCAAATGTACACTCTTCACCGG 59.258 50.000 0.00 0.00 0.00 5.28
373 374 3.556213 CCAAATGTACACTCTTCACCGGA 60.556 47.826 9.46 0.00 0.00 5.14
374 375 3.314541 AATGTACACTCTTCACCGGAC 57.685 47.619 9.46 0.00 0.00 4.79
375 376 0.594602 TGTACACTCTTCACCGGACG 59.405 55.000 9.46 0.00 0.00 4.79
376 377 0.109412 GTACACTCTTCACCGGACGG 60.109 60.000 9.46 9.56 42.03 4.79
377 378 0.250858 TACACTCTTCACCGGACGGA 60.251 55.000 18.80 0.00 38.96 4.69
378 379 1.213013 CACTCTTCACCGGACGGAG 59.787 63.158 18.80 10.03 38.96 4.63
396 397 5.682659 ACGGAGTGAGTATGATACTAGTGT 58.317 41.667 4.88 0.00 42.51 3.55
397 398 6.824553 ACGGAGTGAGTATGATACTAGTGTA 58.175 40.000 4.88 0.00 42.51 2.90
398 399 7.451732 ACGGAGTGAGTATGATACTAGTGTAT 58.548 38.462 4.88 0.00 42.51 2.29
399 400 7.388224 ACGGAGTGAGTATGATACTAGTGTATG 59.612 40.741 4.88 0.00 42.51 2.39
400 401 7.603024 CGGAGTGAGTATGATACTAGTGTATGA 59.397 40.741 4.88 0.00 39.29 2.15
401 402 8.941977 GGAGTGAGTATGATACTAGTGTATGAG 58.058 40.741 4.88 0.00 39.29 2.90
402 403 9.713713 GAGTGAGTATGATACTAGTGTATGAGA 57.286 37.037 4.88 0.00 39.29 3.27
403 404 9.496873 AGTGAGTATGATACTAGTGTATGAGAC 57.503 37.037 4.88 0.00 39.29 3.36
404 405 9.496873 GTGAGTATGATACTAGTGTATGAGACT 57.503 37.037 4.88 0.00 43.68 3.24
410 411 8.397575 TGATACTAGTGTATGAGACTTCATCC 57.602 38.462 5.39 0.00 42.97 3.51
411 412 5.759506 ACTAGTGTATGAGACTTCATCCG 57.240 43.478 0.00 0.00 42.97 4.18
412 413 5.194432 ACTAGTGTATGAGACTTCATCCGT 58.806 41.667 0.00 0.00 42.97 4.69
413 414 6.354938 ACTAGTGTATGAGACTTCATCCGTA 58.645 40.000 0.00 0.00 42.97 4.02
414 415 6.827251 ACTAGTGTATGAGACTTCATCCGTAA 59.173 38.462 0.00 0.00 42.97 3.18
415 416 6.716934 AGTGTATGAGACTTCATCCGTAAT 57.283 37.500 0.00 0.00 42.97 1.89
416 417 6.507900 AGTGTATGAGACTTCATCCGTAATG 58.492 40.000 0.00 0.00 42.97 1.90
417 418 5.175856 GTGTATGAGACTTCATCCGTAATGC 59.824 44.000 0.00 0.00 42.97 3.56
418 419 3.885724 TGAGACTTCATCCGTAATGCA 57.114 42.857 0.00 0.00 35.17 3.96
419 420 4.406648 TGAGACTTCATCCGTAATGCAT 57.593 40.909 0.00 0.00 35.17 3.96
420 421 4.122046 TGAGACTTCATCCGTAATGCATG 58.878 43.478 0.00 0.00 35.17 4.06
421 422 3.470709 AGACTTCATCCGTAATGCATGG 58.529 45.455 0.00 0.00 35.17 3.66
422 423 3.118261 AGACTTCATCCGTAATGCATGGT 60.118 43.478 0.00 0.00 35.17 3.55
423 424 4.100963 AGACTTCATCCGTAATGCATGGTA 59.899 41.667 0.00 0.00 35.17 3.25
424 425 4.973168 ACTTCATCCGTAATGCATGGTAT 58.027 39.130 0.00 0.00 35.17 2.73
425 426 5.376625 ACTTCATCCGTAATGCATGGTATT 58.623 37.500 0.00 0.00 35.17 1.89
426 427 6.530120 ACTTCATCCGTAATGCATGGTATTA 58.470 36.000 0.00 0.00 35.17 0.98
427 428 7.168219 ACTTCATCCGTAATGCATGGTATTAT 58.832 34.615 0.00 0.00 35.17 1.28
428 429 8.318412 ACTTCATCCGTAATGCATGGTATTATA 58.682 33.333 0.00 0.00 35.17 0.98
429 430 9.330063 CTTCATCCGTAATGCATGGTATTATAT 57.670 33.333 0.00 0.00 35.17 0.86
430 431 8.661352 TCATCCGTAATGCATGGTATTATATG 57.339 34.615 0.00 0.00 35.17 1.78
431 432 8.264347 TCATCCGTAATGCATGGTATTATATGT 58.736 33.333 0.00 0.00 35.17 2.29
432 433 8.892723 CATCCGTAATGCATGGTATTATATGTT 58.107 33.333 0.00 0.00 34.56 2.71
433 434 8.262715 TCCGTAATGCATGGTATTATATGTTG 57.737 34.615 0.00 0.00 34.56 3.33
434 435 8.097662 TCCGTAATGCATGGTATTATATGTTGA 58.902 33.333 0.00 0.00 34.56 3.18
435 436 8.892723 CCGTAATGCATGGTATTATATGTTGAT 58.107 33.333 0.00 0.00 0.00 2.57
468 469 8.467963 AGGATTACATTTATTGTCATGCATGA 57.532 30.769 25.42 25.42 39.87 3.07
481 482 4.735985 TCATGCATGACACAAAATAGCAC 58.264 39.130 25.42 0.00 32.92 4.40
482 483 4.217983 TCATGCATGACACAAAATAGCACA 59.782 37.500 25.42 0.00 32.92 4.57
483 484 4.787260 TGCATGACACAAAATAGCACAT 57.213 36.364 0.00 0.00 0.00 3.21
484 485 4.735985 TGCATGACACAAAATAGCACATC 58.264 39.130 0.00 0.00 0.00 3.06
485 486 4.217983 TGCATGACACAAAATAGCACATCA 59.782 37.500 0.00 0.00 0.00 3.07
486 487 5.105675 TGCATGACACAAAATAGCACATCAT 60.106 36.000 0.00 0.00 0.00 2.45
487 488 5.808540 GCATGACACAAAATAGCACATCATT 59.191 36.000 0.00 0.00 0.00 2.57
488 489 6.311935 GCATGACACAAAATAGCACATCATTT 59.688 34.615 0.00 0.00 0.00 2.32
489 490 7.488792 GCATGACACAAAATAGCACATCATTTA 59.511 33.333 0.00 0.00 0.00 1.40
490 491 9.356433 CATGACACAAAATAGCACATCATTTAA 57.644 29.630 0.00 0.00 0.00 1.52
501 502 9.890629 ATAGCACATCATTTAATATGATACGGT 57.109 29.630 10.72 11.66 36.69 4.83
503 504 9.890629 AGCACATCATTTAATATGATACGGTAT 57.109 29.630 0.00 0.00 36.69 2.73
527 528 7.709149 TCATGATATGATACTCGGACATCTT 57.291 36.000 0.00 0.00 33.59 2.40
528 529 8.127150 TCATGATATGATACTCGGACATCTTT 57.873 34.615 0.00 0.00 33.59 2.52
529 530 8.588472 TCATGATATGATACTCGGACATCTTTT 58.412 33.333 0.00 0.00 33.59 2.27
530 531 9.212641 CATGATATGATACTCGGACATCTTTTT 57.787 33.333 0.00 0.00 0.00 1.94
531 532 8.818141 TGATATGATACTCGGACATCTTTTTC 57.182 34.615 0.00 0.00 0.00 2.29
532 533 8.642432 TGATATGATACTCGGACATCTTTTTCT 58.358 33.333 0.00 0.00 0.00 2.52
533 534 9.482627 GATATGATACTCGGACATCTTTTTCTT 57.517 33.333 0.00 0.00 0.00 2.52
534 535 7.778470 ATGATACTCGGACATCTTTTTCTTC 57.222 36.000 0.00 0.00 0.00 2.87
535 536 6.697395 TGATACTCGGACATCTTTTTCTTCA 58.303 36.000 0.00 0.00 0.00 3.02
536 537 7.331026 TGATACTCGGACATCTTTTTCTTCAT 58.669 34.615 0.00 0.00 0.00 2.57
537 538 7.824289 TGATACTCGGACATCTTTTTCTTCATT 59.176 33.333 0.00 0.00 0.00 2.57
538 539 6.884280 ACTCGGACATCTTTTTCTTCATTT 57.116 33.333 0.00 0.00 0.00 2.32
539 540 7.979444 ACTCGGACATCTTTTTCTTCATTTA 57.021 32.000 0.00 0.00 0.00 1.40
540 541 8.391075 ACTCGGACATCTTTTTCTTCATTTAA 57.609 30.769 0.00 0.00 0.00 1.52
541 542 9.014297 ACTCGGACATCTTTTTCTTCATTTAAT 57.986 29.630 0.00 0.00 0.00 1.40
542 543 9.846248 CTCGGACATCTTTTTCTTCATTTAATT 57.154 29.630 0.00 0.00 0.00 1.40
543 544 9.840427 TCGGACATCTTTTTCTTCATTTAATTC 57.160 29.630 0.00 0.00 0.00 2.17
544 545 9.846248 CGGACATCTTTTTCTTCATTTAATTCT 57.154 29.630 0.00 0.00 0.00 2.40
575 576 9.265938 CACATCATCAAAATTACTTAGTTGACG 57.734 33.333 0.00 0.00 33.09 4.35
576 577 8.999431 ACATCATCAAAATTACTTAGTTGACGT 58.001 29.630 0.00 0.00 33.09 4.34
577 578 9.265938 CATCATCAAAATTACTTAGTTGACGTG 57.734 33.333 0.00 0.00 33.09 4.49
578 579 7.295201 TCATCAAAATTACTTAGTTGACGTGC 58.705 34.615 0.00 0.00 33.09 5.34
579 580 6.606234 TCAAAATTACTTAGTTGACGTGCA 57.394 33.333 0.00 0.00 0.00 4.57
580 581 7.197071 TCAAAATTACTTAGTTGACGTGCAT 57.803 32.000 0.00 0.00 0.00 3.96
581 582 7.075121 TCAAAATTACTTAGTTGACGTGCATG 58.925 34.615 3.82 3.82 0.00 4.06
582 583 6.795098 AAATTACTTAGTTGACGTGCATGA 57.205 33.333 14.17 0.00 0.00 3.07
583 584 6.985188 AATTACTTAGTTGACGTGCATGAT 57.015 33.333 14.17 0.00 0.00 2.45
584 585 8.487313 AAATTACTTAGTTGACGTGCATGATA 57.513 30.769 14.17 0.00 0.00 2.15
585 586 6.880822 TTACTTAGTTGACGTGCATGATAC 57.119 37.500 14.17 7.27 0.00 2.24
586 587 5.073311 ACTTAGTTGACGTGCATGATACT 57.927 39.130 14.17 13.90 0.00 2.12
587 588 6.203808 ACTTAGTTGACGTGCATGATACTA 57.796 37.500 14.17 12.96 0.00 1.82
588 589 6.034591 ACTTAGTTGACGTGCATGATACTAC 58.965 40.000 14.17 10.20 0.00 2.73
589 590 3.782046 AGTTGACGTGCATGATACTACC 58.218 45.455 14.17 0.00 0.00 3.18
590 591 3.447586 AGTTGACGTGCATGATACTACCT 59.552 43.478 14.17 0.00 0.00 3.08
591 592 4.643334 AGTTGACGTGCATGATACTACCTA 59.357 41.667 14.17 0.00 0.00 3.08
592 593 5.302059 AGTTGACGTGCATGATACTACCTAT 59.698 40.000 14.17 0.00 0.00 2.57
593 594 5.121221 TGACGTGCATGATACTACCTATG 57.879 43.478 14.17 0.00 0.00 2.23
594 595 4.825085 TGACGTGCATGATACTACCTATGA 59.175 41.667 14.17 0.00 0.00 2.15
595 596 5.300792 TGACGTGCATGATACTACCTATGAA 59.699 40.000 14.17 0.00 0.00 2.57
596 597 6.156748 ACGTGCATGATACTACCTATGAAA 57.843 37.500 14.17 0.00 0.00 2.69
597 598 5.983720 ACGTGCATGATACTACCTATGAAAC 59.016 40.000 14.17 0.00 0.00 2.78
598 599 6.183360 ACGTGCATGATACTACCTATGAAACT 60.183 38.462 14.17 0.00 0.00 2.66
599 600 6.363626 CGTGCATGATACTACCTATGAAACTC 59.636 42.308 0.00 0.00 0.00 3.01
600 601 6.647067 GTGCATGATACTACCTATGAAACTCC 59.353 42.308 0.00 0.00 0.00 3.85
601 602 6.166982 GCATGATACTACCTATGAAACTCCC 58.833 44.000 0.00 0.00 0.00 4.30
602 603 6.239600 GCATGATACTACCTATGAAACTCCCA 60.240 42.308 0.00 0.00 0.00 4.37
603 604 6.726490 TGATACTACCTATGAAACTCCCAC 57.274 41.667 0.00 0.00 0.00 4.61
604 605 6.441222 TGATACTACCTATGAAACTCCCACT 58.559 40.000 0.00 0.00 0.00 4.00
605 606 7.589081 TGATACTACCTATGAAACTCCCACTA 58.411 38.462 0.00 0.00 0.00 2.74
606 607 7.504911 TGATACTACCTATGAAACTCCCACTAC 59.495 40.741 0.00 0.00 0.00 2.73
607 608 4.961099 ACTACCTATGAAACTCCCACTACC 59.039 45.833 0.00 0.00 0.00 3.18
608 609 3.798515 ACCTATGAAACTCCCACTACCA 58.201 45.455 0.00 0.00 0.00 3.25
609 610 3.518303 ACCTATGAAACTCCCACTACCAC 59.482 47.826 0.00 0.00 0.00 4.16
610 611 3.118371 CCTATGAAACTCCCACTACCACC 60.118 52.174 0.00 0.00 0.00 4.61
611 612 1.809133 TGAAACTCCCACTACCACCA 58.191 50.000 0.00 0.00 0.00 4.17
612 613 1.697432 TGAAACTCCCACTACCACCAG 59.303 52.381 0.00 0.00 0.00 4.00
613 614 0.400594 AAACTCCCACTACCACCAGC 59.599 55.000 0.00 0.00 0.00 4.85
614 615 1.489560 AACTCCCACTACCACCAGCC 61.490 60.000 0.00 0.00 0.00 4.85
624 625 4.038162 CACTACCACCAGCCTAAGATAGAC 59.962 50.000 0.00 0.00 0.00 2.59
629 630 3.034635 ACCAGCCTAAGATAGACAGTGG 58.965 50.000 0.00 0.00 0.00 4.00
634 635 3.432326 GCCTAAGATAGACAGTGGGGTTG 60.432 52.174 0.00 0.00 0.00 3.77
644 645 2.091333 ACAGTGGGGTTGGTTCTTCATT 60.091 45.455 0.00 0.00 0.00 2.57
651 652 3.552890 GGGTTGGTTCTTCATTCAAGTGC 60.553 47.826 0.00 0.00 33.27 4.40
655 656 2.413371 GGTTCTTCATTCAAGTGCGCTC 60.413 50.000 9.73 4.74 33.27 5.03
664 665 2.954316 TCAAGTGCGCTCGAAAAGATA 58.046 42.857 9.73 0.00 0.00 1.98
678 682 7.535599 GCTCGAAAAGATAGGAAGAACAAAAAG 59.464 37.037 0.00 0.00 0.00 2.27
682 686 6.901081 AAGATAGGAAGAACAAAAAGGTGG 57.099 37.500 0.00 0.00 0.00 4.61
689 693 6.156083 AGGAAGAACAAAAAGGTGGAATTTCA 59.844 34.615 0.00 0.00 0.00 2.69
701 705 4.403734 GTGGAATTTCAAGGTACCAGGAA 58.596 43.478 15.94 14.01 0.00 3.36
713 717 4.770531 AGGTACCAGGAAATTAGCAAAACC 59.229 41.667 15.94 0.00 0.00 3.27
716 720 3.639561 ACCAGGAAATTAGCAAAACCGTT 59.360 39.130 0.00 0.00 0.00 4.44
723 727 8.077991 AGGAAATTAGCAAAACCGTTAACTTAC 58.922 33.333 3.71 0.00 0.00 2.34
795 1410 1.453015 AAGACTTTGCCACCGTGCA 60.453 52.632 0.00 0.00 40.07 4.57
796 1411 0.823356 AAGACTTTGCCACCGTGCAT 60.823 50.000 0.00 0.00 41.70 3.96
906 1524 9.905713 TGCTCTAATGGAAAAAGATTACAGTAT 57.094 29.630 0.00 0.00 0.00 2.12
1393 2046 2.847754 TTCAACGCCGACCTCGTCA 61.848 57.895 0.00 0.00 39.48 4.35
1758 2417 1.797933 CGACCACTTGCTCGTCTCG 60.798 63.158 0.00 0.00 0.00 4.04
2157 2852 2.628696 CGCCCAGTTCTGCATGCAA 61.629 57.895 22.88 10.06 0.00 4.08
2400 3098 3.781307 CGGGAGCGGGTCATCCAA 61.781 66.667 9.66 0.00 37.33 3.53
2416 3114 2.259012 TCCAACTTATACCCACCGTGT 58.741 47.619 0.00 0.00 0.00 4.49
2651 3359 7.065324 TCTGTAACCGCAGATTAATTTACTTGG 59.935 37.037 6.89 0.97 40.23 3.61
2656 3364 5.277828 CCGCAGATTAATTTACTTGGGTAGC 60.278 44.000 0.00 0.00 0.00 3.58
2687 3395 4.394439 TTTTGAACTGGTTTACTTGGGC 57.606 40.909 0.00 0.00 0.00 5.36
2694 3402 3.132111 ACTGGTTTACTTGGGCAGTTTTG 59.868 43.478 0.00 0.00 36.88 2.44
2744 3452 8.924511 AGTCTGAGATGGAAAACAAGAAAATA 57.075 30.769 0.00 0.00 0.00 1.40
2758 3466 9.757227 AAACAAGAAAATATTTTGGTCGATTCA 57.243 25.926 17.98 0.00 0.00 2.57
2763 3471 8.971073 AGAAAATATTTTGGTCGATTCAATCCT 58.029 29.630 17.98 1.32 0.00 3.24
2807 3515 5.338614 CGAATGTCGTCCTTTTACTGTTT 57.661 39.130 0.00 0.00 34.72 2.83
2921 3642 2.873649 GCAAGTTCCTGGAGAGTCTTGG 60.874 54.545 21.92 0.00 38.04 3.61
2957 3679 6.227298 TCATGATCCTGAGACTTTTAGGAC 57.773 41.667 0.00 3.24 42.95 3.85
2973 3695 9.416284 ACTTTTAGGACAAAAGTTGAAATCCTA 57.584 29.630 8.85 0.00 45.20 2.94
2981 3703 7.931275 ACAAAAGTTGAAATCCTAGTTGAGTC 58.069 34.615 0.00 0.00 0.00 3.36
2991 3717 8.764524 AAATCCTAGTTGAGTCGCATAATATC 57.235 34.615 0.00 0.00 0.00 1.63
3054 3785 3.112878 TGGTTGCTCCAAGGGGATA 57.887 52.632 0.00 0.00 43.91 2.59
3061 3792 5.710567 GGTTGCTCCAAGGGGATAATAATAC 59.289 44.000 0.00 0.00 43.91 1.89
3085 3816 8.430801 ACTGCTTACTTTCATGAAATAGCTAG 57.569 34.615 29.88 26.89 33.81 3.42
3087 3818 9.534565 CTGCTTACTTTCATGAAATAGCTAGTA 57.465 33.333 29.88 21.79 33.81 1.82
3108 3839 7.724305 AGTACTAGCAAAAGAAAAACGATCA 57.276 32.000 0.00 0.00 0.00 2.92
3135 3866 6.427853 TCACTTTCTTGAATGTAGTGATGGTG 59.572 38.462 10.53 0.00 40.01 4.17
3136 3867 5.182001 ACTTTCTTGAATGTAGTGATGGTGC 59.818 40.000 0.88 0.00 0.00 5.01
3148 3879 1.768275 TGATGGTGCGATTGAGGGTAT 59.232 47.619 0.00 0.00 0.00 2.73
3187 3918 6.609237 TCATGCAACTGCTTATTATGAGAC 57.391 37.500 2.95 0.00 42.66 3.36
3230 3961 6.928202 TGGTAATCTCTTTCCTAGATCTCCT 58.072 40.000 0.00 0.00 32.48 3.69
3295 4599 5.721232 TGCTGCTCTAACTAGACCTTTTAC 58.279 41.667 0.00 0.00 0.00 2.01
3296 4600 5.480772 TGCTGCTCTAACTAGACCTTTTACT 59.519 40.000 0.00 0.00 0.00 2.24
3299 4603 8.198778 GCTGCTCTAACTAGACCTTTTACTATT 58.801 37.037 0.00 0.00 0.00 1.73
3390 4695 4.469657 AGTTTTATCAACACTGCTGGGAA 58.530 39.130 0.00 0.00 0.00 3.97
3393 4698 4.901197 TTATCAACACTGCTGGGAAGTA 57.099 40.909 0.00 0.00 0.00 2.24
3405 4710 1.551883 TGGGAAGTAGTTAAGGACGGC 59.448 52.381 0.00 0.00 0.00 5.68
3410 4715 1.823610 AGTAGTTAAGGACGGCTGGAC 59.176 52.381 0.00 0.00 0.00 4.02
3462 4767 8.575589 TGCAAGAATAAACATACAACAGTGAAT 58.424 29.630 0.00 0.00 0.00 2.57
3505 5309 8.640091 AAGTTTTCTGCAAAGAAGAAGATTTC 57.360 30.769 0.00 0.00 35.20 2.17
3517 5321 7.680442 AGAAGAAGATTTCCTAAGAAGCAAC 57.320 36.000 0.00 0.00 32.35 4.17
3519 5323 7.390162 AGAAGAAGATTTCCTAAGAAGCAACTG 59.610 37.037 0.00 0.00 32.35 3.16
3623 5759 5.941647 CCAAGGAAGAATGAATTTTTGGCAT 59.058 36.000 0.00 0.00 0.00 4.40
3624 5760 6.093082 CCAAGGAAGAATGAATTTTTGGCATC 59.907 38.462 0.00 0.00 0.00 3.91
3626 5762 4.567959 GGAAGAATGAATTTTTGGCATCGG 59.432 41.667 0.00 0.00 0.00 4.18
3630 5766 6.877236 AGAATGAATTTTTGGCATCGGTATT 58.123 32.000 0.00 0.00 0.00 1.89
3631 5767 8.006298 AGAATGAATTTTTGGCATCGGTATTA 57.994 30.769 0.00 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.299279 ACATCGAGTCCAACTCAACAAATTT 59.701 36.000 7.78 0.00 45.30 1.82
4 5 3.804036 ACATCGAGTCCAACTCAACAAA 58.196 40.909 7.78 0.00 45.30 2.83
6 7 3.469008 AACATCGAGTCCAACTCAACA 57.531 42.857 7.78 0.00 45.30 3.33
8 9 4.556233 CAGTAACATCGAGTCCAACTCAA 58.444 43.478 7.78 0.00 45.30 3.02
10 11 2.924290 GCAGTAACATCGAGTCCAACTC 59.076 50.000 0.00 0.00 41.71 3.01
11 12 2.563179 AGCAGTAACATCGAGTCCAACT 59.437 45.455 0.00 0.00 0.00 3.16
12 13 2.668457 CAGCAGTAACATCGAGTCCAAC 59.332 50.000 0.00 0.00 0.00 3.77
13 14 2.560981 TCAGCAGTAACATCGAGTCCAA 59.439 45.455 0.00 0.00 0.00 3.53
14 15 2.167662 TCAGCAGTAACATCGAGTCCA 58.832 47.619 0.00 0.00 0.00 4.02
15 16 2.941453 TCAGCAGTAACATCGAGTCC 57.059 50.000 0.00 0.00 0.00 3.85
16 17 3.839293 ACTTCAGCAGTAACATCGAGTC 58.161 45.455 0.00 0.00 31.97 3.36
17 18 3.944055 ACTTCAGCAGTAACATCGAGT 57.056 42.857 0.00 0.00 31.97 4.18
18 19 5.403246 AGTAACTTCAGCAGTAACATCGAG 58.597 41.667 0.00 0.00 32.94 4.04
19 20 5.386958 AGTAACTTCAGCAGTAACATCGA 57.613 39.130 0.00 0.00 32.94 3.59
20 21 4.563184 GGAGTAACTTCAGCAGTAACATCG 59.437 45.833 0.00 0.00 32.94 3.84
21 22 4.870991 GGGAGTAACTTCAGCAGTAACATC 59.129 45.833 0.00 0.00 32.94 3.06
22 23 4.286032 TGGGAGTAACTTCAGCAGTAACAT 59.714 41.667 0.00 0.00 32.94 2.71
23 24 3.644265 TGGGAGTAACTTCAGCAGTAACA 59.356 43.478 0.00 0.00 32.94 2.41
24 25 4.267349 TGGGAGTAACTTCAGCAGTAAC 57.733 45.455 0.00 0.00 32.94 2.50
25 26 5.221843 ACAATGGGAGTAACTTCAGCAGTAA 60.222 40.000 0.00 0.00 32.94 2.24
26 27 4.286032 ACAATGGGAGTAACTTCAGCAGTA 59.714 41.667 0.00 0.00 32.94 2.74
27 28 3.073062 ACAATGGGAGTAACTTCAGCAGT 59.927 43.478 0.00 0.00 37.30 4.40
28 29 3.438087 CACAATGGGAGTAACTTCAGCAG 59.562 47.826 0.00 0.00 0.00 4.24
29 30 3.411446 CACAATGGGAGTAACTTCAGCA 58.589 45.455 0.00 0.00 0.00 4.41
30 31 2.749621 CCACAATGGGAGTAACTTCAGC 59.250 50.000 0.00 0.00 32.67 4.26
31 32 2.749621 GCCACAATGGGAGTAACTTCAG 59.250 50.000 0.00 0.00 38.19 3.02
32 33 2.375174 AGCCACAATGGGAGTAACTTCA 59.625 45.455 0.00 0.00 38.19 3.02
33 34 3.073274 AGCCACAATGGGAGTAACTTC 57.927 47.619 0.00 0.00 38.19 3.01
34 35 3.587506 ACTAGCCACAATGGGAGTAACTT 59.412 43.478 0.00 0.00 38.19 2.66
35 36 3.182152 ACTAGCCACAATGGGAGTAACT 58.818 45.455 0.00 0.00 38.19 2.24
36 37 3.197983 AGACTAGCCACAATGGGAGTAAC 59.802 47.826 0.00 0.00 38.19 2.50
37 38 3.450904 AGACTAGCCACAATGGGAGTAA 58.549 45.455 0.00 0.00 38.19 2.24
38 39 3.031736 GAGACTAGCCACAATGGGAGTA 58.968 50.000 0.00 0.00 38.19 2.59
39 40 1.834263 GAGACTAGCCACAATGGGAGT 59.166 52.381 0.00 0.00 38.19 3.85
40 41 1.833630 TGAGACTAGCCACAATGGGAG 59.166 52.381 0.00 0.00 38.19 4.30
41 42 1.951209 TGAGACTAGCCACAATGGGA 58.049 50.000 0.00 0.00 38.19 4.37
42 43 2.237143 TCTTGAGACTAGCCACAATGGG 59.763 50.000 0.00 0.00 38.19 4.00
43 44 3.616956 TCTTGAGACTAGCCACAATGG 57.383 47.619 0.00 0.00 41.55 3.16
44 45 4.763073 TCATCTTGAGACTAGCCACAATG 58.237 43.478 0.00 0.00 0.00 2.82
45 46 5.366460 CATCATCTTGAGACTAGCCACAAT 58.634 41.667 0.00 0.00 0.00 2.71
46 47 4.383444 CCATCATCTTGAGACTAGCCACAA 60.383 45.833 0.00 0.00 0.00 3.33
47 48 3.133542 CCATCATCTTGAGACTAGCCACA 59.866 47.826 0.00 0.00 0.00 4.17
48 49 3.494048 CCCATCATCTTGAGACTAGCCAC 60.494 52.174 0.00 0.00 0.00 5.01
49 50 2.702478 CCCATCATCTTGAGACTAGCCA 59.298 50.000 0.00 0.00 0.00 4.75
50 51 2.038295 CCCCATCATCTTGAGACTAGCC 59.962 54.545 0.00 0.00 0.00 3.93
51 52 2.703007 ACCCCATCATCTTGAGACTAGC 59.297 50.000 0.00 0.00 0.00 3.42
52 53 4.163078 ACAACCCCATCATCTTGAGACTAG 59.837 45.833 0.00 0.00 0.00 2.57
53 54 4.080919 CACAACCCCATCATCTTGAGACTA 60.081 45.833 0.00 0.00 0.00 2.59
54 55 2.915604 ACAACCCCATCATCTTGAGACT 59.084 45.455 0.00 0.00 0.00 3.24
55 56 3.012518 CACAACCCCATCATCTTGAGAC 58.987 50.000 0.00 0.00 0.00 3.36
56 57 2.025981 CCACAACCCCATCATCTTGAGA 60.026 50.000 0.00 0.00 0.00 3.27
57 58 2.372264 CCACAACCCCATCATCTTGAG 58.628 52.381 0.00 0.00 0.00 3.02
58 59 1.616725 GCCACAACCCCATCATCTTGA 60.617 52.381 0.00 0.00 0.00 3.02
59 60 0.819582 GCCACAACCCCATCATCTTG 59.180 55.000 0.00 0.00 0.00 3.02
60 61 0.706433 AGCCACAACCCCATCATCTT 59.294 50.000 0.00 0.00 0.00 2.40
61 62 0.706433 AAGCCACAACCCCATCATCT 59.294 50.000 0.00 0.00 0.00 2.90
62 63 1.106285 GAAGCCACAACCCCATCATC 58.894 55.000 0.00 0.00 0.00 2.92
63 64 0.324645 GGAAGCCACAACCCCATCAT 60.325 55.000 0.00 0.00 0.00 2.45
64 65 1.076549 GGAAGCCACAACCCCATCA 59.923 57.895 0.00 0.00 0.00 3.07
65 66 1.682344 GGGAAGCCACAACCCCATC 60.682 63.158 0.00 0.00 38.69 3.51
66 67 2.155197 GAGGGAAGCCACAACCCCAT 62.155 60.000 0.00 0.00 44.21 4.00
67 68 2.780924 AGGGAAGCCACAACCCCA 60.781 61.111 0.00 0.00 44.21 4.96
68 69 1.205460 TAGAGGGAAGCCACAACCCC 61.205 60.000 0.00 0.00 44.21 4.95
99 100 7.327214 CAGCCTTAGAGAAAAGTCATAGTCTT 58.673 38.462 0.00 0.00 0.00 3.01
102 103 5.485708 ACCAGCCTTAGAGAAAAGTCATAGT 59.514 40.000 0.00 0.00 0.00 2.12
104 105 6.173339 CAACCAGCCTTAGAGAAAAGTCATA 58.827 40.000 0.00 0.00 0.00 2.15
105 106 4.917906 ACCAGCCTTAGAGAAAAGTCAT 57.082 40.909 0.00 0.00 0.00 3.06
106 107 4.141482 ACAACCAGCCTTAGAGAAAAGTCA 60.141 41.667 0.00 0.00 0.00 3.41
107 108 4.390264 ACAACCAGCCTTAGAGAAAAGTC 58.610 43.478 0.00 0.00 0.00 3.01
108 109 4.439253 ACAACCAGCCTTAGAGAAAAGT 57.561 40.909 0.00 0.00 0.00 2.66
109 110 6.127897 CCATTACAACCAGCCTTAGAGAAAAG 60.128 42.308 0.00 0.00 0.00 2.27
112 113 4.324254 CCCATTACAACCAGCCTTAGAGAA 60.324 45.833 0.00 0.00 0.00 2.87
113 114 3.199946 CCCATTACAACCAGCCTTAGAGA 59.800 47.826 0.00 0.00 0.00 3.10
114 115 3.545703 CCCATTACAACCAGCCTTAGAG 58.454 50.000 0.00 0.00 0.00 2.43
116 117 2.241176 TCCCCATTACAACCAGCCTTAG 59.759 50.000 0.00 0.00 0.00 2.18
117 118 2.241176 CTCCCCATTACAACCAGCCTTA 59.759 50.000 0.00 0.00 0.00 2.69
118 119 1.005924 CTCCCCATTACAACCAGCCTT 59.994 52.381 0.00 0.00 0.00 4.35
119 120 0.625849 CTCCCCATTACAACCAGCCT 59.374 55.000 0.00 0.00 0.00 4.58
120 121 0.331616 ACTCCCCATTACAACCAGCC 59.668 55.000 0.00 0.00 0.00 4.85
121 122 1.004277 TCACTCCCCATTACAACCAGC 59.996 52.381 0.00 0.00 0.00 4.85
122 123 3.433306 TTCACTCCCCATTACAACCAG 57.567 47.619 0.00 0.00 0.00 4.00
123 124 3.885976 TTTCACTCCCCATTACAACCA 57.114 42.857 0.00 0.00 0.00 3.67
124 125 6.844097 TTTATTTCACTCCCCATTACAACC 57.156 37.500 0.00 0.00 0.00 3.77
146 147 5.469760 GCTTACACCTTTCCAATGCATTTTT 59.530 36.000 9.83 0.00 0.00 1.94
147 148 4.996758 GCTTACACCTTTCCAATGCATTTT 59.003 37.500 9.83 0.00 0.00 1.82
148 149 4.563374 GGCTTACACCTTTCCAATGCATTT 60.563 41.667 9.83 0.00 0.00 2.32
149 150 3.055891 GGCTTACACCTTTCCAATGCATT 60.056 43.478 5.99 5.99 0.00 3.56
150 151 2.497273 GGCTTACACCTTTCCAATGCAT 59.503 45.455 0.00 0.00 0.00 3.96
151 152 1.892474 GGCTTACACCTTTCCAATGCA 59.108 47.619 0.00 0.00 0.00 3.96
152 153 1.892474 TGGCTTACACCTTTCCAATGC 59.108 47.619 0.00 0.00 0.00 3.56
153 154 3.575965 GTGGCTTACACCTTTCCAATG 57.424 47.619 0.00 0.00 44.49 2.82
164 165 3.445008 AGAAGAGAGATGGTGGCTTACA 58.555 45.455 0.00 0.00 0.00 2.41
165 166 3.704061 AGAGAAGAGAGATGGTGGCTTAC 59.296 47.826 0.00 0.00 0.00 2.34
166 167 3.987745 AGAGAAGAGAGATGGTGGCTTA 58.012 45.455 0.00 0.00 0.00 3.09
167 168 2.831565 AGAGAAGAGAGATGGTGGCTT 58.168 47.619 0.00 0.00 0.00 4.35
168 169 2.548464 AGAGAAGAGAGATGGTGGCT 57.452 50.000 0.00 0.00 0.00 4.75
169 170 3.625649 AAAGAGAAGAGAGATGGTGGC 57.374 47.619 0.00 0.00 0.00 5.01
170 171 7.713073 GGTAATTAAAGAGAAGAGAGATGGTGG 59.287 40.741 0.00 0.00 0.00 4.61
171 172 7.713073 GGGTAATTAAAGAGAAGAGAGATGGTG 59.287 40.741 0.00 0.00 0.00 4.17
172 173 7.403231 TGGGTAATTAAAGAGAAGAGAGATGGT 59.597 37.037 0.00 0.00 0.00 3.55
173 174 7.796054 TGGGTAATTAAAGAGAAGAGAGATGG 58.204 38.462 0.00 0.00 0.00 3.51
174 175 9.103861 GTTGGGTAATTAAAGAGAAGAGAGATG 57.896 37.037 0.00 0.00 0.00 2.90
175 176 8.268605 GGTTGGGTAATTAAAGAGAAGAGAGAT 58.731 37.037 0.00 0.00 0.00 2.75
176 177 7.458170 AGGTTGGGTAATTAAAGAGAAGAGAGA 59.542 37.037 0.00 0.00 0.00 3.10
177 178 7.625469 AGGTTGGGTAATTAAAGAGAAGAGAG 58.375 38.462 0.00 0.00 0.00 3.20
178 179 7.569599 AGGTTGGGTAATTAAAGAGAAGAGA 57.430 36.000 0.00 0.00 0.00 3.10
179 180 7.883311 TGAAGGTTGGGTAATTAAAGAGAAGAG 59.117 37.037 0.00 0.00 0.00 2.85
180 181 7.751646 TGAAGGTTGGGTAATTAAAGAGAAGA 58.248 34.615 0.00 0.00 0.00 2.87
181 182 7.996098 TGAAGGTTGGGTAATTAAAGAGAAG 57.004 36.000 0.00 0.00 0.00 2.85
182 183 8.802267 CATTGAAGGTTGGGTAATTAAAGAGAA 58.198 33.333 0.00 0.00 0.00 2.87
183 184 8.167392 TCATTGAAGGTTGGGTAATTAAAGAGA 58.833 33.333 0.00 0.00 0.00 3.10
184 185 8.348285 TCATTGAAGGTTGGGTAATTAAAGAG 57.652 34.615 0.00 0.00 0.00 2.85
185 186 8.581578 GTTCATTGAAGGTTGGGTAATTAAAGA 58.418 33.333 0.00 0.00 0.00 2.52
186 187 8.585018 AGTTCATTGAAGGTTGGGTAATTAAAG 58.415 33.333 0.00 0.00 0.00 1.85
187 188 8.485578 AGTTCATTGAAGGTTGGGTAATTAAA 57.514 30.769 0.00 0.00 0.00 1.52
188 189 9.589461 TTAGTTCATTGAAGGTTGGGTAATTAA 57.411 29.630 0.00 0.00 0.00 1.40
189 190 9.238368 CTTAGTTCATTGAAGGTTGGGTAATTA 57.762 33.333 0.00 0.00 0.00 1.40
190 191 7.728532 ACTTAGTTCATTGAAGGTTGGGTAATT 59.271 33.333 0.00 0.00 0.00 1.40
191 192 7.176690 CACTTAGTTCATTGAAGGTTGGGTAAT 59.823 37.037 0.00 0.00 0.00 1.89
192 193 6.488683 CACTTAGTTCATTGAAGGTTGGGTAA 59.511 38.462 0.00 0.00 0.00 2.85
193 194 6.001460 CACTTAGTTCATTGAAGGTTGGGTA 58.999 40.000 0.00 0.00 0.00 3.69
194 195 4.827284 CACTTAGTTCATTGAAGGTTGGGT 59.173 41.667 0.00 0.00 0.00 4.51
195 196 4.321230 GCACTTAGTTCATTGAAGGTTGGG 60.321 45.833 0.00 0.00 0.00 4.12
196 197 4.278170 TGCACTTAGTTCATTGAAGGTTGG 59.722 41.667 0.00 0.00 0.00 3.77
197 198 5.437289 TGCACTTAGTTCATTGAAGGTTG 57.563 39.130 0.00 0.00 0.00 3.77
198 199 5.536161 ACATGCACTTAGTTCATTGAAGGTT 59.464 36.000 0.00 0.00 0.00 3.50
199 200 5.072741 ACATGCACTTAGTTCATTGAAGGT 58.927 37.500 0.00 0.00 0.00 3.50
200 201 5.633830 ACATGCACTTAGTTCATTGAAGG 57.366 39.130 0.00 0.00 0.00 3.46
201 202 7.132694 TGTACATGCACTTAGTTCATTGAAG 57.867 36.000 0.00 0.00 0.00 3.02
202 203 7.503521 TTGTACATGCACTTAGTTCATTGAA 57.496 32.000 0.00 0.00 0.00 2.69
203 204 7.503521 TTTGTACATGCACTTAGTTCATTGA 57.496 32.000 0.00 0.00 0.00 2.57
204 205 8.746922 AATTTGTACATGCACTTAGTTCATTG 57.253 30.769 0.00 0.00 0.00 2.82
207 208 9.278978 TCTTAATTTGTACATGCACTTAGTTCA 57.721 29.630 0.00 0.00 0.00 3.18
210 211 9.502091 TCTTCTTAATTTGTACATGCACTTAGT 57.498 29.630 0.00 0.00 0.00 2.24
211 212 9.760660 GTCTTCTTAATTTGTACATGCACTTAG 57.239 33.333 0.00 0.00 0.00 2.18
212 213 8.726988 GGTCTTCTTAATTTGTACATGCACTTA 58.273 33.333 0.00 0.00 0.00 2.24
213 214 7.230510 TGGTCTTCTTAATTTGTACATGCACTT 59.769 33.333 0.00 0.00 0.00 3.16
214 215 6.714810 TGGTCTTCTTAATTTGTACATGCACT 59.285 34.615 0.00 0.00 0.00 4.40
215 216 6.908825 TGGTCTTCTTAATTTGTACATGCAC 58.091 36.000 0.00 0.00 0.00 4.57
216 217 7.176515 ACATGGTCTTCTTAATTTGTACATGCA 59.823 33.333 0.00 0.00 36.40 3.96
217 218 7.485913 CACATGGTCTTCTTAATTTGTACATGC 59.514 37.037 0.00 0.00 36.40 4.06
218 219 8.514594 ACACATGGTCTTCTTAATTTGTACATG 58.485 33.333 0.00 0.00 38.27 3.21
219 220 8.635765 ACACATGGTCTTCTTAATTTGTACAT 57.364 30.769 0.00 0.00 0.00 2.29
220 221 9.214957 CTACACATGGTCTTCTTAATTTGTACA 57.785 33.333 0.00 0.00 0.00 2.90
221 222 9.431887 TCTACACATGGTCTTCTTAATTTGTAC 57.568 33.333 0.00 0.00 0.00 2.90
223 224 9.520515 AATCTACACATGGTCTTCTTAATTTGT 57.479 29.630 0.00 0.00 0.00 2.83
224 225 9.778993 CAATCTACACATGGTCTTCTTAATTTG 57.221 33.333 0.00 0.00 0.00 2.32
225 226 9.520515 ACAATCTACACATGGTCTTCTTAATTT 57.479 29.630 0.00 0.00 0.00 1.82
226 227 9.520515 AACAATCTACACATGGTCTTCTTAATT 57.479 29.630 0.00 0.00 0.00 1.40
230 231 8.950210 CAATAACAATCTACACATGGTCTTCTT 58.050 33.333 0.00 0.00 0.00 2.52
231 232 7.554118 CCAATAACAATCTACACATGGTCTTCT 59.446 37.037 0.00 0.00 0.00 2.85
232 233 7.336931 ACCAATAACAATCTACACATGGTCTTC 59.663 37.037 0.00 0.00 33.59 2.87
233 234 7.175104 ACCAATAACAATCTACACATGGTCTT 58.825 34.615 0.00 0.00 33.59 3.01
234 235 6.721318 ACCAATAACAATCTACACATGGTCT 58.279 36.000 0.00 0.00 33.59 3.85
235 236 7.016361 GACCAATAACAATCTACACATGGTC 57.984 40.000 5.47 5.47 45.04 4.02
236 237 6.721318 AGACCAATAACAATCTACACATGGT 58.279 36.000 0.00 0.00 41.10 3.55
237 238 7.336679 TCAAGACCAATAACAATCTACACATGG 59.663 37.037 0.00 0.00 0.00 3.66
238 239 8.267620 TCAAGACCAATAACAATCTACACATG 57.732 34.615 0.00 0.00 0.00 3.21
239 240 9.466497 AATCAAGACCAATAACAATCTACACAT 57.534 29.630 0.00 0.00 0.00 3.21
240 241 8.862325 AATCAAGACCAATAACAATCTACACA 57.138 30.769 0.00 0.00 0.00 3.72
245 246 8.830580 CACGATAATCAAGACCAATAACAATCT 58.169 33.333 0.00 0.00 0.00 2.40
246 247 8.612619 ACACGATAATCAAGACCAATAACAATC 58.387 33.333 0.00 0.00 0.00 2.67
247 248 8.506168 ACACGATAATCAAGACCAATAACAAT 57.494 30.769 0.00 0.00 0.00 2.71
248 249 7.915293 ACACGATAATCAAGACCAATAACAA 57.085 32.000 0.00 0.00 0.00 2.83
249 250 9.607988 ATTACACGATAATCAAGACCAATAACA 57.392 29.630 0.00 0.00 0.00 2.41
250 251 9.864034 CATTACACGATAATCAAGACCAATAAC 57.136 33.333 0.00 0.00 0.00 1.89
251 252 9.825109 TCATTACACGATAATCAAGACCAATAA 57.175 29.630 0.00 0.00 0.00 1.40
252 253 9.476202 CTCATTACACGATAATCAAGACCAATA 57.524 33.333 0.00 0.00 0.00 1.90
253 254 7.442364 CCTCATTACACGATAATCAAGACCAAT 59.558 37.037 0.00 0.00 0.00 3.16
254 255 6.761242 CCTCATTACACGATAATCAAGACCAA 59.239 38.462 0.00 0.00 0.00 3.67
255 256 6.280643 CCTCATTACACGATAATCAAGACCA 58.719 40.000 0.00 0.00 0.00 4.02
256 257 5.696724 CCCTCATTACACGATAATCAAGACC 59.303 44.000 0.00 0.00 0.00 3.85
257 258 6.513180 TCCCTCATTACACGATAATCAAGAC 58.487 40.000 0.00 0.00 0.00 3.01
258 259 6.549736 TCTCCCTCATTACACGATAATCAAGA 59.450 38.462 0.00 0.00 0.00 3.02
259 260 6.749139 TCTCCCTCATTACACGATAATCAAG 58.251 40.000 0.00 0.00 0.00 3.02
260 261 6.724893 TCTCCCTCATTACACGATAATCAA 57.275 37.500 0.00 0.00 0.00 2.57
261 262 6.724893 TTCTCCCTCATTACACGATAATCA 57.275 37.500 0.00 0.00 0.00 2.57
262 263 9.877178 ATATTTCTCCCTCATTACACGATAATC 57.123 33.333 0.00 0.00 0.00 1.75
266 267 8.980481 AAAATATTTCTCCCTCATTACACGAT 57.020 30.769 0.10 0.00 0.00 3.73
267 268 8.801882 AAAAATATTTCTCCCTCATTACACGA 57.198 30.769 0.10 0.00 0.00 4.35
300 301 9.023962 TGTATTTCTATCTTTCCAATGCACTTT 57.976 29.630 0.00 0.00 0.00 2.66
301 302 8.462016 GTGTATTTCTATCTTTCCAATGCACTT 58.538 33.333 0.00 0.00 37.43 3.16
302 303 7.831193 AGTGTATTTCTATCTTTCCAATGCACT 59.169 33.333 7.78 7.78 42.44 4.40
303 304 7.989826 AGTGTATTTCTATCTTTCCAATGCAC 58.010 34.615 0.00 0.00 39.42 4.57
304 305 8.049117 AGAGTGTATTTCTATCTTTCCAATGCA 58.951 33.333 0.00 0.00 0.00 3.96
305 306 8.443953 AGAGTGTATTTCTATCTTTCCAATGC 57.556 34.615 0.00 0.00 0.00 3.56
309 310 9.793259 ACAAAAGAGTGTATTTCTATCTTTCCA 57.207 29.630 0.00 0.00 38.82 3.53
312 313 9.793259 TCCACAAAAGAGTGTATTTCTATCTTT 57.207 29.630 0.00 0.00 40.87 2.52
313 314 9.220767 GTCCACAAAAGAGTGTATTTCTATCTT 57.779 33.333 0.00 0.00 37.82 2.40
314 315 8.375506 TGTCCACAAAAGAGTGTATTTCTATCT 58.624 33.333 0.00 0.00 37.82 1.98
315 316 8.547967 TGTCCACAAAAGAGTGTATTTCTATC 57.452 34.615 0.00 0.00 37.82 2.08
316 317 8.918202 TTGTCCACAAAAGAGTGTATTTCTAT 57.082 30.769 0.00 0.00 37.82 1.98
317 318 8.740123 TTTGTCCACAAAAGAGTGTATTTCTA 57.260 30.769 2.29 0.00 42.26 2.10
318 319 7.639113 TTTGTCCACAAAAGAGTGTATTTCT 57.361 32.000 2.29 0.00 42.26 2.52
329 330 7.574592 TTTGGCTTCAAAATTTGTCCACAAAAG 60.575 33.333 8.88 2.64 40.58 2.27
330 331 6.207417 TTTGGCTTCAAAATTTGTCCACAAAA 59.793 30.769 8.88 2.12 40.58 2.44
331 332 5.707298 TTTGGCTTCAAAATTTGTCCACAAA 59.293 32.000 7.32 7.32 40.97 2.83
332 333 4.478206 TGGCTTCAAAATTTGTCCACAA 57.522 36.364 5.56 0.00 0.00 3.33
333 334 4.478206 TTGGCTTCAAAATTTGTCCACA 57.522 36.364 5.56 0.00 0.00 4.17
334 335 5.296531 ACATTTGGCTTCAAAATTTGTCCAC 59.703 36.000 5.56 0.00 42.77 4.02
335 336 5.435291 ACATTTGGCTTCAAAATTTGTCCA 58.565 33.333 5.56 8.83 42.77 4.02
336 337 6.481644 TGTACATTTGGCTTCAAAATTTGTCC 59.518 34.615 5.56 6.55 42.77 4.02
337 338 7.224557 AGTGTACATTTGGCTTCAAAATTTGTC 59.775 33.333 5.56 0.00 42.77 3.18
338 339 7.047271 AGTGTACATTTGGCTTCAAAATTTGT 58.953 30.769 5.56 0.00 42.77 2.83
339 340 7.439056 AGAGTGTACATTTGGCTTCAAAATTTG 59.561 33.333 0.00 0.00 42.77 2.32
340 341 7.500141 AGAGTGTACATTTGGCTTCAAAATTT 58.500 30.769 0.00 0.00 42.77 1.82
341 342 7.054491 AGAGTGTACATTTGGCTTCAAAATT 57.946 32.000 0.00 0.00 42.77 1.82
342 343 6.655078 AGAGTGTACATTTGGCTTCAAAAT 57.345 33.333 0.00 0.00 42.77 1.82
343 344 6.096141 TGAAGAGTGTACATTTGGCTTCAAAA 59.904 34.615 14.64 0.00 42.77 2.44
344 345 5.592282 TGAAGAGTGTACATTTGGCTTCAAA 59.408 36.000 14.64 0.00 43.53 2.69
345 346 5.008613 GTGAAGAGTGTACATTTGGCTTCAA 59.991 40.000 17.16 5.21 41.02 2.69
346 347 4.515191 GTGAAGAGTGTACATTTGGCTTCA 59.485 41.667 13.58 13.58 38.23 3.02
347 348 4.083271 GGTGAAGAGTGTACATTTGGCTTC 60.083 45.833 0.00 5.19 0.00 3.86
348 349 3.821033 GGTGAAGAGTGTACATTTGGCTT 59.179 43.478 0.00 0.00 0.00 4.35
349 350 3.412386 GGTGAAGAGTGTACATTTGGCT 58.588 45.455 0.00 0.00 0.00 4.75
350 351 2.159627 CGGTGAAGAGTGTACATTTGGC 59.840 50.000 0.00 0.00 0.00 4.52
351 352 2.742053 CCGGTGAAGAGTGTACATTTGG 59.258 50.000 0.00 0.00 0.00 3.28
352 353 3.432252 GTCCGGTGAAGAGTGTACATTTG 59.568 47.826 0.00 0.00 0.00 2.32
353 354 3.660865 GTCCGGTGAAGAGTGTACATTT 58.339 45.455 0.00 0.00 0.00 2.32
354 355 2.352421 CGTCCGGTGAAGAGTGTACATT 60.352 50.000 0.00 0.00 0.00 2.71
355 356 1.201647 CGTCCGGTGAAGAGTGTACAT 59.798 52.381 0.00 0.00 0.00 2.29
356 357 0.594602 CGTCCGGTGAAGAGTGTACA 59.405 55.000 0.00 0.00 0.00 2.90
357 358 0.109412 CCGTCCGGTGAAGAGTGTAC 60.109 60.000 0.00 0.00 0.00 2.90
358 359 0.250858 TCCGTCCGGTGAAGAGTGTA 60.251 55.000 0.00 0.00 36.47 2.90
359 360 1.524863 CTCCGTCCGGTGAAGAGTGT 61.525 60.000 0.00 0.00 36.47 3.55
360 361 1.213013 CTCCGTCCGGTGAAGAGTG 59.787 63.158 0.00 0.00 36.47 3.51
361 362 1.228490 ACTCCGTCCGGTGAAGAGT 60.228 57.895 14.09 7.35 33.63 3.24
362 363 1.213013 CACTCCGTCCGGTGAAGAG 59.787 63.158 14.09 6.67 35.69 2.85
363 364 1.228337 TCACTCCGTCCGGTGAAGA 60.228 57.895 14.09 8.66 39.16 2.87
364 365 1.213013 CTCACTCCGTCCGGTGAAG 59.787 63.158 14.09 3.35 41.13 3.02
365 366 0.250858 TACTCACTCCGTCCGGTGAA 60.251 55.000 14.09 2.07 41.13 3.18
366 367 0.034767 ATACTCACTCCGTCCGGTGA 60.035 55.000 14.09 6.80 39.71 4.02
367 368 0.100682 CATACTCACTCCGTCCGGTG 59.899 60.000 0.00 5.92 36.47 4.94
368 369 0.034767 TCATACTCACTCCGTCCGGT 60.035 55.000 0.00 0.00 36.47 5.28
369 370 1.319541 ATCATACTCACTCCGTCCGG 58.680 55.000 0.00 0.00 0.00 5.14
370 371 3.139850 AGTATCATACTCACTCCGTCCG 58.860 50.000 0.00 0.00 32.47 4.79
371 372 5.179742 CACTAGTATCATACTCACTCCGTCC 59.820 48.000 0.00 0.00 40.14 4.79
372 373 5.759273 ACACTAGTATCATACTCACTCCGTC 59.241 44.000 0.00 0.00 40.14 4.79
373 374 5.682659 ACACTAGTATCATACTCACTCCGT 58.317 41.667 0.00 0.00 40.14 4.69
374 375 7.603024 TCATACACTAGTATCATACTCACTCCG 59.397 40.741 0.00 0.00 38.88 4.63
375 376 8.850007 TCATACACTAGTATCATACTCACTCC 57.150 38.462 0.00 0.00 38.88 3.85
376 377 9.713713 TCTCATACACTAGTATCATACTCACTC 57.286 37.037 0.00 0.00 38.88 3.51
377 378 9.496873 GTCTCATACACTAGTATCATACTCACT 57.503 37.037 0.00 0.00 38.88 3.41
378 379 9.496873 AGTCTCATACACTAGTATCATACTCAC 57.503 37.037 0.00 0.00 38.88 3.51
384 385 9.019656 GGATGAAGTCTCATACACTAGTATCAT 57.980 37.037 0.00 0.00 42.60 2.45
385 386 7.173390 CGGATGAAGTCTCATACACTAGTATCA 59.827 40.741 0.00 0.00 42.42 2.15
386 387 7.173562 ACGGATGAAGTCTCATACACTAGTATC 59.826 40.741 0.00 0.00 42.42 2.24
387 388 6.999272 ACGGATGAAGTCTCATACACTAGTAT 59.001 38.462 0.00 0.00 42.42 2.12
388 389 6.354938 ACGGATGAAGTCTCATACACTAGTA 58.645 40.000 0.00 0.00 42.42 1.82
389 390 5.194432 ACGGATGAAGTCTCATACACTAGT 58.806 41.667 0.00 0.00 42.42 2.57
390 391 5.759506 ACGGATGAAGTCTCATACACTAG 57.240 43.478 0.00 0.00 42.42 2.57
391 392 7.649057 CATTACGGATGAAGTCTCATACACTA 58.351 38.462 0.00 0.00 42.42 2.74
392 393 6.507900 CATTACGGATGAAGTCTCATACACT 58.492 40.000 0.00 0.00 42.42 3.55
393 394 5.175856 GCATTACGGATGAAGTCTCATACAC 59.824 44.000 5.36 0.00 42.42 2.90
394 395 5.163457 TGCATTACGGATGAAGTCTCATACA 60.163 40.000 5.36 0.00 42.42 2.29
395 396 5.289595 TGCATTACGGATGAAGTCTCATAC 58.710 41.667 5.36 0.00 42.60 2.39
396 397 5.529581 TGCATTACGGATGAAGTCTCATA 57.470 39.130 5.36 0.00 42.60 2.15
397 398 4.406648 TGCATTACGGATGAAGTCTCAT 57.593 40.909 5.36 0.00 45.34 2.90
398 399 3.885724 TGCATTACGGATGAAGTCTCA 57.114 42.857 5.36 0.00 38.03 3.27
399 400 3.496130 CCATGCATTACGGATGAAGTCTC 59.504 47.826 0.00 0.00 45.87 3.36
400 401 3.118261 ACCATGCATTACGGATGAAGTCT 60.118 43.478 8.47 0.00 45.87 3.24
401 402 3.206150 ACCATGCATTACGGATGAAGTC 58.794 45.455 8.47 0.00 45.87 3.01
402 403 3.281727 ACCATGCATTACGGATGAAGT 57.718 42.857 8.47 0.00 45.87 3.01
403 404 5.947228 AATACCATGCATTACGGATGAAG 57.053 39.130 8.47 0.00 45.87 3.02
404 405 9.108284 CATATAATACCATGCATTACGGATGAA 57.892 33.333 8.47 0.00 45.87 2.57
405 406 8.264347 ACATATAATACCATGCATTACGGATGA 58.736 33.333 8.47 0.00 45.87 2.92
406 407 8.437360 ACATATAATACCATGCATTACGGATG 57.563 34.615 8.47 3.55 42.81 3.51
407 408 8.892723 CAACATATAATACCATGCATTACGGAT 58.107 33.333 8.47 0.00 0.00 4.18
408 409 8.097662 TCAACATATAATACCATGCATTACGGA 58.902 33.333 8.47 0.00 0.00 4.69
409 410 8.262715 TCAACATATAATACCATGCATTACGG 57.737 34.615 0.00 0.00 0.00 4.02
442 443 9.571816 TCATGCATGACAATAAATGTAATCCTA 57.428 29.630 25.42 0.00 44.12 2.94
443 444 8.467963 TCATGCATGACAATAAATGTAATCCT 57.532 30.769 25.42 0.00 44.12 3.24
459 460 4.217983 TGTGCTATTTTGTGTCATGCATGA 59.782 37.500 25.42 25.42 0.00 3.07
460 461 4.487019 TGTGCTATTTTGTGTCATGCATG 58.513 39.130 21.07 21.07 0.00 4.06
461 462 4.787260 TGTGCTATTTTGTGTCATGCAT 57.213 36.364 0.00 0.00 0.00 3.96
462 463 4.217983 TGATGTGCTATTTTGTGTCATGCA 59.782 37.500 0.00 0.00 0.00 3.96
463 464 4.735985 TGATGTGCTATTTTGTGTCATGC 58.264 39.130 0.00 0.00 0.00 4.06
464 465 7.821595 AAATGATGTGCTATTTTGTGTCATG 57.178 32.000 0.00 0.00 0.00 3.07
475 476 9.890629 ACCGTATCATATTAAATGATGTGCTAT 57.109 29.630 16.73 0.93 38.98 2.97
477 478 9.890629 ATACCGTATCATATTAAATGATGTGCT 57.109 29.630 16.73 5.80 38.98 4.40
503 504 7.709149 AAGATGTCCGAGTATCATATCATGA 57.291 36.000 0.00 0.00 44.55 3.07
504 505 8.768957 AAAAGATGTCCGAGTATCATATCATG 57.231 34.615 0.00 0.00 33.17 3.07
505 506 9.429359 GAAAAAGATGTCCGAGTATCATATCAT 57.571 33.333 0.00 0.00 33.17 2.45
506 507 8.642432 AGAAAAAGATGTCCGAGTATCATATCA 58.358 33.333 0.00 0.00 33.17 2.15
507 508 9.482627 AAGAAAAAGATGTCCGAGTATCATATC 57.517 33.333 0.00 0.00 33.17 1.63
508 509 9.482627 GAAGAAAAAGATGTCCGAGTATCATAT 57.517 33.333 0.00 0.00 33.17 1.78
509 510 8.474831 TGAAGAAAAAGATGTCCGAGTATCATA 58.525 33.333 0.00 0.00 33.17 2.15
510 511 7.331026 TGAAGAAAAAGATGTCCGAGTATCAT 58.669 34.615 0.00 0.00 33.17 2.45
511 512 6.697395 TGAAGAAAAAGATGTCCGAGTATCA 58.303 36.000 0.00 0.00 33.17 2.15
512 513 7.778470 ATGAAGAAAAAGATGTCCGAGTATC 57.222 36.000 0.00 0.00 0.00 2.24
513 514 8.567285 AAATGAAGAAAAAGATGTCCGAGTAT 57.433 30.769 0.00 0.00 0.00 2.12
514 515 7.979444 AAATGAAGAAAAAGATGTCCGAGTA 57.021 32.000 0.00 0.00 0.00 2.59
515 516 6.884280 AAATGAAGAAAAAGATGTCCGAGT 57.116 33.333 0.00 0.00 0.00 4.18
516 517 9.846248 AATTAAATGAAGAAAAAGATGTCCGAG 57.154 29.630 0.00 0.00 0.00 4.63
517 518 9.840427 GAATTAAATGAAGAAAAAGATGTCCGA 57.160 29.630 0.00 0.00 0.00 4.55
518 519 9.846248 AGAATTAAATGAAGAAAAAGATGTCCG 57.154 29.630 0.00 0.00 0.00 4.79
549 550 9.265938 CGTCAACTAAGTAATTTTGATGATGTG 57.734 33.333 4.32 0.00 37.22 3.21
550 551 8.999431 ACGTCAACTAAGTAATTTTGATGATGT 58.001 29.630 13.64 10.33 38.08 3.06
551 552 9.265938 CACGTCAACTAAGTAATTTTGATGATG 57.734 33.333 13.64 9.87 38.05 3.07
552 553 7.962918 GCACGTCAACTAAGTAATTTTGATGAT 59.037 33.333 13.64 0.45 38.05 2.45
553 554 7.041712 TGCACGTCAACTAAGTAATTTTGATGA 60.042 33.333 13.64 2.01 38.05 2.92
554 555 7.075121 TGCACGTCAACTAAGTAATTTTGATG 58.925 34.615 7.62 7.62 39.74 3.07
555 556 7.197071 TGCACGTCAACTAAGTAATTTTGAT 57.803 32.000 0.00 0.00 30.96 2.57
556 557 6.606234 TGCACGTCAACTAAGTAATTTTGA 57.394 33.333 0.00 0.00 0.00 2.69
557 558 7.075121 TCATGCACGTCAACTAAGTAATTTTG 58.925 34.615 0.00 0.00 0.00 2.44
558 559 7.197071 TCATGCACGTCAACTAAGTAATTTT 57.803 32.000 0.00 0.00 0.00 1.82
559 560 6.795098 TCATGCACGTCAACTAAGTAATTT 57.205 33.333 0.00 0.00 0.00 1.82
560 561 6.985188 ATCATGCACGTCAACTAAGTAATT 57.015 33.333 0.00 0.00 0.00 1.40
561 562 7.265673 AGTATCATGCACGTCAACTAAGTAAT 58.734 34.615 0.00 0.00 0.00 1.89
562 563 6.627243 AGTATCATGCACGTCAACTAAGTAA 58.373 36.000 0.00 0.00 0.00 2.24
563 564 6.203808 AGTATCATGCACGTCAACTAAGTA 57.796 37.500 0.00 0.00 0.00 2.24
564 565 5.073311 AGTATCATGCACGTCAACTAAGT 57.927 39.130 0.00 0.00 0.00 2.24
565 566 5.459107 GGTAGTATCATGCACGTCAACTAAG 59.541 44.000 0.00 0.00 0.00 2.18
566 567 5.126545 AGGTAGTATCATGCACGTCAACTAA 59.873 40.000 0.00 0.00 0.00 2.24
567 568 4.643334 AGGTAGTATCATGCACGTCAACTA 59.357 41.667 0.00 0.00 0.00 2.24
568 569 3.447586 AGGTAGTATCATGCACGTCAACT 59.552 43.478 0.00 0.00 0.00 3.16
569 570 3.782046 AGGTAGTATCATGCACGTCAAC 58.218 45.455 0.00 0.00 0.00 3.18
570 571 5.300792 TCATAGGTAGTATCATGCACGTCAA 59.699 40.000 0.00 0.00 0.00 3.18
571 572 4.825085 TCATAGGTAGTATCATGCACGTCA 59.175 41.667 0.00 0.00 0.00 4.35
572 573 5.372547 TCATAGGTAGTATCATGCACGTC 57.627 43.478 0.00 0.00 0.00 4.34
573 574 5.784578 TTCATAGGTAGTATCATGCACGT 57.215 39.130 0.00 0.00 0.00 4.49
574 575 6.216569 AGTTTCATAGGTAGTATCATGCACG 58.783 40.000 0.00 0.00 0.00 5.34
575 576 6.647067 GGAGTTTCATAGGTAGTATCATGCAC 59.353 42.308 0.00 0.00 0.00 4.57
576 577 6.239600 GGGAGTTTCATAGGTAGTATCATGCA 60.240 42.308 0.00 0.00 0.00 3.96
577 578 6.166982 GGGAGTTTCATAGGTAGTATCATGC 58.833 44.000 0.00 0.00 0.00 4.06
578 579 7.015682 AGTGGGAGTTTCATAGGTAGTATCATG 59.984 40.741 0.00 0.00 0.00 3.07
579 580 7.076446 AGTGGGAGTTTCATAGGTAGTATCAT 58.924 38.462 0.00 0.00 0.00 2.45
580 581 6.441222 AGTGGGAGTTTCATAGGTAGTATCA 58.559 40.000 0.00 0.00 0.00 2.15
581 582 6.980416 AGTGGGAGTTTCATAGGTAGTATC 57.020 41.667 0.00 0.00 0.00 2.24
582 583 6.781507 GGTAGTGGGAGTTTCATAGGTAGTAT 59.218 42.308 0.00 0.00 0.00 2.12
583 584 6.131961 GGTAGTGGGAGTTTCATAGGTAGTA 58.868 44.000 0.00 0.00 0.00 1.82
584 585 4.961099 GGTAGTGGGAGTTTCATAGGTAGT 59.039 45.833 0.00 0.00 0.00 2.73
585 586 4.960469 TGGTAGTGGGAGTTTCATAGGTAG 59.040 45.833 0.00 0.00 0.00 3.18
586 587 4.713321 GTGGTAGTGGGAGTTTCATAGGTA 59.287 45.833 0.00 0.00 0.00 3.08
587 588 3.518303 GTGGTAGTGGGAGTTTCATAGGT 59.482 47.826 0.00 0.00 0.00 3.08
588 589 3.118371 GGTGGTAGTGGGAGTTTCATAGG 60.118 52.174 0.00 0.00 0.00 2.57
589 590 3.517901 TGGTGGTAGTGGGAGTTTCATAG 59.482 47.826 0.00 0.00 0.00 2.23
590 591 3.517901 CTGGTGGTAGTGGGAGTTTCATA 59.482 47.826 0.00 0.00 0.00 2.15
591 592 2.305927 CTGGTGGTAGTGGGAGTTTCAT 59.694 50.000 0.00 0.00 0.00 2.57
592 593 1.697432 CTGGTGGTAGTGGGAGTTTCA 59.303 52.381 0.00 0.00 0.00 2.69
593 594 1.610886 GCTGGTGGTAGTGGGAGTTTC 60.611 57.143 0.00 0.00 0.00 2.78
594 595 0.400594 GCTGGTGGTAGTGGGAGTTT 59.599 55.000 0.00 0.00 0.00 2.66
595 596 1.489560 GGCTGGTGGTAGTGGGAGTT 61.490 60.000 0.00 0.00 0.00 3.01
596 597 1.918800 GGCTGGTGGTAGTGGGAGT 60.919 63.158 0.00 0.00 0.00 3.85
597 598 0.325296 TAGGCTGGTGGTAGTGGGAG 60.325 60.000 0.00 0.00 0.00 4.30
598 599 0.117541 TTAGGCTGGTGGTAGTGGGA 59.882 55.000 0.00 0.00 0.00 4.37
599 600 0.541863 CTTAGGCTGGTGGTAGTGGG 59.458 60.000 0.00 0.00 0.00 4.61
600 601 1.568504 TCTTAGGCTGGTGGTAGTGG 58.431 55.000 0.00 0.00 0.00 4.00
601 602 4.038162 GTCTATCTTAGGCTGGTGGTAGTG 59.962 50.000 0.00 0.00 0.00 2.74
602 603 4.216708 GTCTATCTTAGGCTGGTGGTAGT 58.783 47.826 0.00 0.00 0.00 2.73
603 604 4.215908 TGTCTATCTTAGGCTGGTGGTAG 58.784 47.826 0.00 0.00 0.00 3.18
604 605 4.215908 CTGTCTATCTTAGGCTGGTGGTA 58.784 47.826 0.00 0.00 0.00 3.25
605 606 3.034635 CTGTCTATCTTAGGCTGGTGGT 58.965 50.000 0.00 0.00 0.00 4.16
606 607 3.034635 ACTGTCTATCTTAGGCTGGTGG 58.965 50.000 0.00 0.00 34.17 4.61
607 608 3.181471 CCACTGTCTATCTTAGGCTGGTG 60.181 52.174 0.00 0.00 35.92 4.17
608 609 3.034635 CCACTGTCTATCTTAGGCTGGT 58.965 50.000 0.00 0.00 34.17 4.00
609 610 2.366916 CCCACTGTCTATCTTAGGCTGG 59.633 54.545 0.00 0.00 34.17 4.85
610 611 2.366916 CCCCACTGTCTATCTTAGGCTG 59.633 54.545 0.00 0.00 35.73 4.85
611 612 2.022918 ACCCCACTGTCTATCTTAGGCT 60.023 50.000 0.00 0.00 0.00 4.58
612 613 2.399580 ACCCCACTGTCTATCTTAGGC 58.600 52.381 0.00 0.00 0.00 3.93
613 614 3.134804 CCAACCCCACTGTCTATCTTAGG 59.865 52.174 0.00 0.00 0.00 2.69
614 615 3.775316 ACCAACCCCACTGTCTATCTTAG 59.225 47.826 0.00 0.00 0.00 2.18
624 625 2.292828 ATGAAGAACCAACCCCACTG 57.707 50.000 0.00 0.00 0.00 3.66
629 630 3.552890 GCACTTGAATGAAGAACCAACCC 60.553 47.826 0.00 0.00 35.42 4.11
634 635 1.537202 AGCGCACTTGAATGAAGAACC 59.463 47.619 11.47 0.00 35.42 3.62
644 645 1.795768 ATCTTTTCGAGCGCACTTGA 58.204 45.000 11.47 0.00 34.29 3.02
651 652 4.174009 TGTTCTTCCTATCTTTTCGAGCG 58.826 43.478 0.00 0.00 0.00 5.03
655 656 7.591426 CACCTTTTTGTTCTTCCTATCTTTTCG 59.409 37.037 0.00 0.00 0.00 3.46
664 665 6.156083 TGAAATTCCACCTTTTTGTTCTTCCT 59.844 34.615 0.00 0.00 0.00 3.36
678 682 3.089284 CCTGGTACCTTGAAATTCCACC 58.911 50.000 14.36 0.00 0.00 4.61
682 686 7.093945 TGCTAATTTCCTGGTACCTTGAAATTC 60.094 37.037 33.87 26.68 42.97 2.17
689 693 5.245301 GGTTTTGCTAATTTCCTGGTACCTT 59.755 40.000 14.36 0.00 0.00 3.50
701 705 9.276590 ACTAGTAAGTTAACGGTTTTGCTAATT 57.723 29.630 0.00 0.00 29.00 1.40
713 717 5.899299 AGGCCATGTACTAGTAAGTTAACG 58.101 41.667 5.01 0.00 37.15 3.18
716 720 6.862469 ACAAGGCCATGTACTAGTAAGTTA 57.138 37.500 12.93 0.00 37.15 2.24
723 727 5.690409 CGTGTATTACAAGGCCATGTACTAG 59.310 44.000 20.06 6.82 35.60 2.57
907 1525 8.505625 CGCTAGTACAAAACCCTTGTTTAATTA 58.494 33.333 0.00 0.00 43.80 1.40
908 1526 7.364970 CGCTAGTACAAAACCCTTGTTTAATT 58.635 34.615 0.00 0.00 43.80 1.40
993 1632 2.629656 GCTGTGTGGCATTCGGCTT 61.630 57.895 15.14 0.00 44.01 4.35
1227 1877 1.155889 CTGATTGTTGCACGCTGGTA 58.844 50.000 0.00 0.00 0.00 3.25
1693 2352 4.641645 CCGTGCCAGCCAGTCCAA 62.642 66.667 0.00 0.00 0.00 3.53
1854 2516 2.997315 CTGGCCTCGGTGGTGAGA 60.997 66.667 3.32 0.00 38.28 3.27
2400 3098 3.055891 GGTACAACACGGTGGGTATAAGT 60.056 47.826 13.48 2.92 0.00 2.24
2448 3146 0.227735 CGTCGAACGCGTCTTTGAAA 59.772 50.000 14.44 0.00 38.98 2.69
2676 3384 6.566141 TCTAAACAAAACTGCCCAAGTAAAC 58.434 36.000 0.00 0.00 38.56 2.01
2719 3427 7.830099 ATTTTCTTGTTTTCCATCTCAGACT 57.170 32.000 0.00 0.00 0.00 3.24
2744 3452 4.580580 GGCTAGGATTGAATCGACCAAAAT 59.419 41.667 6.22 0.00 0.00 1.82
2758 3466 3.769739 TTGCATCGTATGGCTAGGATT 57.230 42.857 0.00 0.00 31.68 3.01
2763 3471 4.260579 CGTTGAATTTGCATCGTATGGCTA 60.261 41.667 0.00 0.00 0.00 3.93
2858 3566 5.674052 TTATGCCCAAACACATTAGCAAT 57.326 34.783 0.00 0.00 34.33 3.56
2957 3679 7.072030 CGACTCAACTAGGATTTCAACTTTTG 58.928 38.462 0.00 0.00 0.00 2.44
2991 3717 5.238868 CCAATGAAGTTCCTCATCAGCATAG 59.761 44.000 0.00 0.00 34.90 2.23
3061 3792 8.430801 ACTAGCTATTTCATGAAAGTAAGCAG 57.569 34.615 32.60 28.89 37.15 4.24
3085 3816 8.950403 ATTGATCGTTTTTCTTTTGCTAGTAC 57.050 30.769 0.00 0.00 0.00 2.73
3087 3818 7.591426 GTGATTGATCGTTTTTCTTTTGCTAGT 59.409 33.333 0.00 0.00 0.00 2.57
3103 3834 7.901889 CACTACATTCAAGAAAGTGATTGATCG 59.098 37.037 7.13 0.00 39.93 3.69
3104 3835 8.939929 TCACTACATTCAAGAAAGTGATTGATC 58.060 33.333 10.28 0.00 41.09 2.92
3135 3866 5.239306 TCAAATCATCAATACCCTCAATCGC 59.761 40.000 0.00 0.00 0.00 4.58
3136 3867 6.866010 TCAAATCATCAATACCCTCAATCG 57.134 37.500 0.00 0.00 0.00 3.34
3172 3903 6.799512 CCAAAAAGGGTCTCATAATAAGCAG 58.200 40.000 0.00 0.00 0.00 4.24
3197 3928 5.894964 AGGAAAGAGATTACCAGGAGTAGAC 59.105 44.000 0.00 0.00 30.92 2.59
3198 3929 6.093617 AGGAAAGAGATTACCAGGAGTAGA 57.906 41.667 0.00 0.00 30.92 2.59
3201 3932 6.093617 TCTAGGAAAGAGATTACCAGGAGT 57.906 41.667 0.00 0.00 0.00 3.85
3230 3961 0.774276 TATTGTCACCCCACAAGCCA 59.226 50.000 0.00 0.00 39.63 4.75
3268 3999 4.130286 GGTCTAGTTAGAGCAGCATTGT 57.870 45.455 12.22 0.00 46.92 2.71
3311 4615 8.950007 TTAGAGTCCATACCAAAAAGGAATTT 57.050 30.769 0.00 0.00 41.22 1.82
3314 4618 8.272173 CCTATTAGAGTCCATACCAAAAAGGAA 58.728 37.037 0.00 0.00 41.22 3.36
3315 4619 7.147373 CCCTATTAGAGTCCATACCAAAAAGGA 60.147 40.741 0.00 0.00 41.22 3.36
3316 4620 6.998673 CCCTATTAGAGTCCATACCAAAAAGG 59.001 42.308 0.00 0.00 45.67 3.11
3317 4621 6.486993 GCCCTATTAGAGTCCATACCAAAAAG 59.513 42.308 0.00 0.00 0.00 2.27
3324 4628 2.838813 GGGGCCCTATTAGAGTCCATAC 59.161 54.545 24.38 0.00 0.00 2.39
3353 4657 8.925700 GTTGATAAAACTCAATGGGAAATTGTC 58.074 33.333 0.00 0.00 37.47 3.18
3390 4695 1.823610 GTCCAGCCGTCCTTAACTACT 59.176 52.381 0.00 0.00 0.00 2.57
3393 4698 1.551019 GGGTCCAGCCGTCCTTAACT 61.551 60.000 0.00 0.00 38.44 2.24
3405 4710 1.915141 AGCACAATTCTTGGGTCCAG 58.085 50.000 0.00 0.00 36.14 3.86
3478 5106 6.136541 TCTTCTTCTTTGCAGAAAACTTCC 57.863 37.500 0.00 0.00 38.63 3.46
3479 5107 8.640091 AAATCTTCTTCTTTGCAGAAAACTTC 57.360 30.769 0.00 0.00 38.63 3.01
3480 5108 7.708322 GGAAATCTTCTTCTTTGCAGAAAACTT 59.292 33.333 0.00 0.00 38.63 2.66
3481 5109 7.069208 AGGAAATCTTCTTCTTTGCAGAAAACT 59.931 33.333 0.00 0.00 38.63 2.66
3483 5111 7.352079 AGGAAATCTTCTTCTTTGCAGAAAA 57.648 32.000 0.00 0.00 38.63 2.29
3487 5291 7.678947 TCTTAGGAAATCTTCTTCTTTGCAG 57.321 36.000 0.00 0.00 0.00 4.41
3505 5309 5.352569 CACCACTAATCAGTTGCTTCTTAGG 59.647 44.000 0.00 0.00 30.46 2.69
3517 5321 8.964476 AGATTAATACCAACACCACTAATCAG 57.036 34.615 0.00 0.00 30.28 2.90
3519 5323 9.391006 TGAAGATTAATACCAACACCACTAATC 57.609 33.333 0.00 0.00 0.00 1.75
3594 5730 8.901793 CCAAAAATTCATTCTTCCTTGGAAAAA 58.098 29.630 3.54 0.00 35.18 1.94
3606 5742 4.806640 ACCGATGCCAAAAATTCATTCT 57.193 36.364 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.