Multiple sequence alignment - TraesCS3A01G019300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G019300 chr3A 100.000 7608 0 0 1 7608 11786529 11778922 0.000000e+00 14050
1 TraesCS3A01G019300 chr3A 97.396 192 5 0 2377 2568 11784057 11783866 2.050000e-85 327
2 TraesCS3A01G019300 chr3A 97.396 192 5 0 2473 2664 11784153 11783962 2.050000e-85 327
3 TraesCS3A01G019300 chr3A 96.875 96 3 0 2377 2472 11783961 11783866 2.200000e-35 161
4 TraesCS3A01G019300 chr3A 96.875 96 3 0 2569 2664 11784153 11784058 2.200000e-35 161
5 TraesCS3A01G019300 chr3D 93.351 4166 190 27 2569 6683 5246115 5241986 0.000000e+00 6078
6 TraesCS3A01G019300 chr3D 87.364 1836 105 40 696 2472 5247787 5246020 0.000000e+00 1988
7 TraesCS3A01G019300 chr3D 87.097 868 106 4 6742 7608 598597560 598596698 0.000000e+00 977
8 TraesCS3A01G019300 chr3D 97.917 96 2 0 2473 2568 5246115 5246020 4.720000e-37 167
9 TraesCS3A01G019300 chr3B 93.284 3231 180 16 2569 5779 13491408 13494621 0.000000e+00 4730
10 TraesCS3A01G019300 chr3B 93.371 2459 132 13 2569 5020 28265850 28268284 0.000000e+00 3609
11 TraesCS3A01G019300 chr3B 86.178 2402 174 71 199 2472 13489132 13491503 0.000000e+00 2451
12 TraesCS3A01G019300 chr3B 90.416 1659 109 20 845 2472 28264306 28265945 0.000000e+00 2137
13 TraesCS3A01G019300 chr3B 87.596 1693 138 29 5013 6674 28273921 28275572 0.000000e+00 1897
14 TraesCS3A01G019300 chr3B 85.819 1361 173 10 5255 6606 13494040 13495389 0.000000e+00 1426
15 TraesCS3A01G019300 chr3B 80.803 573 96 10 5206 5768 28274165 28274733 3.260000e-118 436
16 TraesCS3A01G019300 chr3B 97.917 96 2 0 2473 2568 13491408 13491503 4.720000e-37 167
17 TraesCS3A01G019300 chr3B 95.833 96 4 0 2473 2568 28265850 28265945 1.020000e-33 156
18 TraesCS3A01G019300 chr4D 84.708 1576 152 51 852 2387 45612228 45613754 0.000000e+00 1493
19 TraesCS3A01G019300 chr4D 88.462 832 64 11 3579 4390 45614465 45615284 0.000000e+00 976
20 TraesCS3A01G019300 chr4D 91.477 704 49 6 2652 3352 45613755 45614450 0.000000e+00 957
21 TraesCS3A01G019300 chr4D 89.369 301 22 5 4411 4706 45615270 45615565 3.350000e-98 370
22 TraesCS3A01G019300 chr1A 97.008 869 20 3 6740 7608 373761024 373760162 0.000000e+00 1456
23 TraesCS3A01G019300 chr6B 95.167 869 38 2 6740 7608 412282830 412283694 0.000000e+00 1369
24 TraesCS3A01G019300 chr6B 94.937 869 40 2 6740 7608 708042011 708042875 0.000000e+00 1358
25 TraesCS3A01G019300 chr6B 86.014 286 26 9 4194 4467 711239557 711239274 2.080000e-75 294
26 TraesCS3A01G019300 chr6B 85.764 288 25 11 4194 4467 710644978 710644693 2.690000e-74 291
27 TraesCS3A01G019300 chr2B 94.713 870 41 3 6740 7608 383361588 383360723 0.000000e+00 1347
28 TraesCS3A01G019300 chr2B 92.381 105 5 2 1 105 21749493 21749594 6.150000e-31 147
29 TraesCS3A01G019300 chr1B 94.700 868 41 3 6741 7608 550681388 550680526 0.000000e+00 1343
30 TraesCS3A01G019300 chr1B 93.678 870 49 4 6740 7608 61320146 61319282 0.000000e+00 1297
31 TraesCS3A01G019300 chr1B 97.778 90 2 0 1 90 658410548 658410459 1.020000e-33 156
32 TraesCS3A01G019300 chr2A 94.591 869 40 4 6740 7608 671341820 671342681 0.000000e+00 1338
33 TraesCS3A01G019300 chr2A 94.805 693 32 2 5279 5970 95547682 95546993 0.000000e+00 1077
34 TraesCS3A01G019300 chr2A 96.739 92 3 0 1 92 293062950 293062859 3.680000e-33 154
35 TraesCS3A01G019300 chr2A 91.589 107 7 2 1 106 71752185 71752080 6.150000e-31 147
36 TraesCS3A01G019300 chr2A 95.604 91 4 0 1 91 652298962 652299052 6.150000e-31 147
37 TraesCS3A01G019300 chr4A 88.032 869 98 3 6740 7608 67262179 67263041 0.000000e+00 1024
38 TraesCS3A01G019300 chr4B 84.615 1001 117 24 1330 2320 65806479 65805506 0.000000e+00 961
39 TraesCS3A01G019300 chr6A 90.182 275 24 2 4194 4467 612111827 612111555 9.390000e-94 355
40 TraesCS3A01G019300 chr6A 95.833 96 3 1 1 95 379695543 379695638 3.680000e-33 154
41 TraesCS3A01G019300 chr6A 95.745 94 4 0 1 94 585472694 585472601 1.320000e-32 152
42 TraesCS3A01G019300 chr6D 88.660 291 28 4 4183 4470 465747755 465747467 4.370000e-92 350
43 TraesCS3A01G019300 chr6D 89.455 275 26 2 4194 4467 465969232 465968960 2.030000e-90 344
44 TraesCS3A01G019300 chr5A 97.778 90 2 0 1 90 18943719 18943630 1.020000e-33 156
45 TraesCS3A01G019300 chr5A 94.792 96 5 0 1 96 145678430 145678335 4.760000e-32 150


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G019300 chr3A 11778922 11786529 7607 True 3005.200000 14050 97.708400 1 7608 5 chr3A.!!$R1 7607
1 TraesCS3A01G019300 chr3D 5241986 5247787 5801 True 2744.333333 6078 92.877333 696 6683 3 chr3D.!!$R2 5987
2 TraesCS3A01G019300 chr3D 598596698 598597560 862 True 977.000000 977 87.097000 6742 7608 1 chr3D.!!$R1 866
3 TraesCS3A01G019300 chr3B 13489132 13495389 6257 False 2193.500000 4730 90.799500 199 6606 4 chr3B.!!$F1 6407
4 TraesCS3A01G019300 chr3B 28264306 28268284 3978 False 1967.333333 3609 93.206667 845 5020 3 chr3B.!!$F2 4175
5 TraesCS3A01G019300 chr3B 28273921 28275572 1651 False 1166.500000 1897 84.199500 5013 6674 2 chr3B.!!$F3 1661
6 TraesCS3A01G019300 chr4D 45612228 45615565 3337 False 949.000000 1493 88.504000 852 4706 4 chr4D.!!$F1 3854
7 TraesCS3A01G019300 chr1A 373760162 373761024 862 True 1456.000000 1456 97.008000 6740 7608 1 chr1A.!!$R1 868
8 TraesCS3A01G019300 chr6B 412282830 412283694 864 False 1369.000000 1369 95.167000 6740 7608 1 chr6B.!!$F1 868
9 TraesCS3A01G019300 chr6B 708042011 708042875 864 False 1358.000000 1358 94.937000 6740 7608 1 chr6B.!!$F2 868
10 TraesCS3A01G019300 chr2B 383360723 383361588 865 True 1347.000000 1347 94.713000 6740 7608 1 chr2B.!!$R1 868
11 TraesCS3A01G019300 chr1B 550680526 550681388 862 True 1343.000000 1343 94.700000 6741 7608 1 chr1B.!!$R2 867
12 TraesCS3A01G019300 chr1B 61319282 61320146 864 True 1297.000000 1297 93.678000 6740 7608 1 chr1B.!!$R1 868
13 TraesCS3A01G019300 chr2A 671341820 671342681 861 False 1338.000000 1338 94.591000 6740 7608 1 chr2A.!!$F2 868
14 TraesCS3A01G019300 chr2A 95546993 95547682 689 True 1077.000000 1077 94.805000 5279 5970 1 chr2A.!!$R2 691
15 TraesCS3A01G019300 chr4A 67262179 67263041 862 False 1024.000000 1024 88.032000 6740 7608 1 chr4A.!!$F1 868
16 TraesCS3A01G019300 chr4B 65805506 65806479 973 True 961.000000 961 84.615000 1330 2320 1 chr4B.!!$R1 990

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 174 0.033504 GAAACAGACCGAGTGGCTGA 59.966 55.0 1.31 0.00 40.00 4.26 F
1107 1255 0.035176 GGGCATCCAGATCTCTGCTC 59.965 60.0 16.75 11.73 42.47 4.26 F
2383 2597 0.035317 CCTGTGAAGGTGCAGCAGTA 59.965 55.0 19.63 0.00 0.00 2.74 F
2436 2650 0.103937 AGCGGAATACTGAGCTGCTC 59.896 55.0 22.38 22.38 39.98 4.26 F
3771 3990 0.034896 ATTCTGGTCAGGCGTTCGTT 59.965 50.0 0.00 0.00 0.00 3.85 F
5027 5311 0.537653 TTTCCCATATCGACACGCCA 59.462 50.0 0.00 0.00 0.00 5.69 F
5759 6158 0.029035 GCTCATGCAAATCCTCTGCG 59.971 55.0 0.00 0.00 42.97 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1246 1411 0.542232 AAGTCTAGCACCCACTCCGT 60.542 55.000 0.00 0.00 0.00 4.69 R
2417 2631 0.103937 GAGCAGCTCAGTATTCCGCT 59.896 55.000 18.17 0.00 0.00 5.52 R
3724 3943 0.536460 GTTTCTGCCCGTTCCCTTCA 60.536 55.000 0.00 0.00 0.00 3.02 R
4032 4282 0.536687 CCCATCTGGTGCATGCCTAG 60.537 60.000 16.68 13.59 0.00 3.02 R
5477 5767 0.109597 CCTGTGCTGCGGAACATTTC 60.110 55.000 6.86 0.00 29.37 2.17 R
6571 6999 0.974010 CTACCCCTTGGTACTCCGCA 60.974 60.000 0.00 0.00 45.45 5.69 R
6865 7304 1.000385 CACTTTGAAGCATTGCGGGAA 60.000 47.619 2.38 0.00 0.00 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.119329 CGTATGTATCTAGACTCATTTTAGTGC 57.881 37.037 14.09 0.00 0.00 4.40
37 38 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
41 42 9.069082 TCTAGACTCATTTTAGTGCTAGATACC 57.931 37.037 0.00 0.00 34.69 2.73
42 43 7.906199 AGACTCATTTTAGTGCTAGATACCT 57.094 36.000 0.00 0.00 0.00 3.08
43 44 7.947282 AGACTCATTTTAGTGCTAGATACCTC 58.053 38.462 0.00 0.00 0.00 3.85
44 45 7.014808 AGACTCATTTTAGTGCTAGATACCTCC 59.985 40.741 0.00 0.00 0.00 4.30
45 46 6.085555 TCATTTTAGTGCTAGATACCTCCG 57.914 41.667 0.00 0.00 0.00 4.63
46 47 5.597182 TCATTTTAGTGCTAGATACCTCCGT 59.403 40.000 0.00 0.00 0.00 4.69
47 48 6.774170 TCATTTTAGTGCTAGATACCTCCGTA 59.226 38.462 0.00 0.00 0.00 4.02
48 49 7.450634 TCATTTTAGTGCTAGATACCTCCGTAT 59.549 37.037 0.00 0.00 37.92 3.06
61 62 7.834881 ATACCTCCGTATCTAGACAAATTCA 57.165 36.000 0.00 0.00 28.45 2.57
62 63 6.540438 ACCTCCGTATCTAGACAAATTCAA 57.460 37.500 0.00 0.00 0.00 2.69
63 64 6.574350 ACCTCCGTATCTAGACAAATTCAAG 58.426 40.000 0.00 0.00 0.00 3.02
64 65 6.380274 ACCTCCGTATCTAGACAAATTCAAGA 59.620 38.462 0.00 0.00 0.00 3.02
65 66 6.697892 CCTCCGTATCTAGACAAATTCAAGAC 59.302 42.308 0.00 0.00 0.00 3.01
66 67 7.165460 TCCGTATCTAGACAAATTCAAGACA 57.835 36.000 0.00 0.00 0.00 3.41
67 68 7.608153 TCCGTATCTAGACAAATTCAAGACAA 58.392 34.615 0.00 0.00 0.00 3.18
68 69 7.759886 TCCGTATCTAGACAAATTCAAGACAAG 59.240 37.037 0.00 0.00 0.00 3.16
69 70 7.545965 CCGTATCTAGACAAATTCAAGACAAGT 59.454 37.037 0.00 0.00 0.00 3.16
70 71 9.569167 CGTATCTAGACAAATTCAAGACAAGTA 57.431 33.333 0.00 0.00 0.00 2.24
75 76 9.746711 CTAGACAAATTCAAGACAAGTAATTCG 57.253 33.333 0.00 0.00 0.00 3.34
76 77 8.378172 AGACAAATTCAAGACAAGTAATTCGA 57.622 30.769 0.00 0.00 0.00 3.71
77 78 8.836413 AGACAAATTCAAGACAAGTAATTCGAA 58.164 29.630 0.00 0.00 0.00 3.71
78 79 9.445786 GACAAATTCAAGACAAGTAATTCGAAA 57.554 29.630 0.00 0.00 0.00 3.46
79 80 9.233232 ACAAATTCAAGACAAGTAATTCGAAAC 57.767 29.630 0.00 0.00 0.00 2.78
80 81 8.409690 CAAATTCAAGACAAGTAATTCGAAACG 58.590 33.333 0.00 0.00 0.00 3.60
81 82 5.585500 TCAAGACAAGTAATTCGAAACGG 57.415 39.130 0.00 0.00 0.00 4.44
82 83 5.291178 TCAAGACAAGTAATTCGAAACGGA 58.709 37.500 0.00 0.00 0.00 4.69
83 84 5.404366 TCAAGACAAGTAATTCGAAACGGAG 59.596 40.000 0.00 0.00 0.00 4.63
84 85 4.243270 AGACAAGTAATTCGAAACGGAGG 58.757 43.478 0.00 0.00 0.00 4.30
85 86 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
86 87 3.007182 ACAAGTAATTCGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
87 88 3.521947 AGTAATTCGAAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
88 89 2.830321 AGTAATTCGAAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
89 90 4.019174 AGTAATTCGAAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
90 91 3.521947 AATTCGAAACGGAGGGAGTAG 57.478 47.619 0.00 0.00 0.00 2.57
91 92 2.205022 TTCGAAACGGAGGGAGTAGA 57.795 50.000 0.00 0.00 0.00 2.59
92 93 2.431954 TCGAAACGGAGGGAGTAGAT 57.568 50.000 0.00 0.00 0.00 1.98
93 94 2.731572 TCGAAACGGAGGGAGTAGATT 58.268 47.619 0.00 0.00 0.00 2.40
94 95 3.094572 TCGAAACGGAGGGAGTAGATTT 58.905 45.455 0.00 0.00 0.00 2.17
95 96 3.119245 TCGAAACGGAGGGAGTAGATTTG 60.119 47.826 0.00 0.00 0.00 2.32
96 97 3.532542 GAAACGGAGGGAGTAGATTTGG 58.467 50.000 0.00 0.00 0.00 3.28
97 98 1.497161 ACGGAGGGAGTAGATTTGGG 58.503 55.000 0.00 0.00 0.00 4.12
98 99 0.106894 CGGAGGGAGTAGATTTGGGC 59.893 60.000 0.00 0.00 0.00 5.36
99 100 1.213296 GGAGGGAGTAGATTTGGGCA 58.787 55.000 0.00 0.00 0.00 5.36
100 101 1.564348 GGAGGGAGTAGATTTGGGCAA 59.436 52.381 0.00 0.00 0.00 4.52
101 102 2.422093 GGAGGGAGTAGATTTGGGCAAG 60.422 54.545 0.00 0.00 0.00 4.01
102 103 1.064389 AGGGAGTAGATTTGGGCAAGC 60.064 52.381 0.00 0.00 0.00 4.01
103 104 1.340991 GGGAGTAGATTTGGGCAAGCA 60.341 52.381 0.00 0.00 0.00 3.91
104 105 2.659428 GGAGTAGATTTGGGCAAGCAT 58.341 47.619 0.00 0.00 0.00 3.79
105 106 2.360165 GGAGTAGATTTGGGCAAGCATG 59.640 50.000 0.00 0.00 0.00 4.06
106 107 3.282021 GAGTAGATTTGGGCAAGCATGA 58.718 45.455 0.00 0.00 0.00 3.07
107 108 3.696051 GAGTAGATTTGGGCAAGCATGAA 59.304 43.478 0.00 0.00 0.00 2.57
108 109 4.284178 AGTAGATTTGGGCAAGCATGAAT 58.716 39.130 0.00 0.00 0.00 2.57
109 110 5.448654 AGTAGATTTGGGCAAGCATGAATA 58.551 37.500 0.00 0.00 0.00 1.75
110 111 6.073314 AGTAGATTTGGGCAAGCATGAATAT 58.927 36.000 0.00 0.00 0.00 1.28
111 112 7.233632 AGTAGATTTGGGCAAGCATGAATATA 58.766 34.615 0.00 0.00 0.00 0.86
112 113 6.982160 AGATTTGGGCAAGCATGAATATAA 57.018 33.333 0.00 0.00 0.00 0.98
113 114 7.549147 AGATTTGGGCAAGCATGAATATAAT 57.451 32.000 0.00 0.00 0.00 1.28
114 115 7.970102 AGATTTGGGCAAGCATGAATATAATT 58.030 30.769 0.00 0.00 0.00 1.40
115 116 8.434392 AGATTTGGGCAAGCATGAATATAATTT 58.566 29.630 0.00 0.00 0.00 1.82
116 117 7.789273 TTTGGGCAAGCATGAATATAATTTG 57.211 32.000 0.00 0.00 0.00 2.32
117 118 6.728089 TGGGCAAGCATGAATATAATTTGA 57.272 33.333 0.00 0.00 0.00 2.69
118 119 7.305813 TGGGCAAGCATGAATATAATTTGAT 57.694 32.000 0.00 0.00 0.00 2.57
119 120 7.737869 TGGGCAAGCATGAATATAATTTGATT 58.262 30.769 0.00 0.00 0.00 2.57
120 121 8.212312 TGGGCAAGCATGAATATAATTTGATTT 58.788 29.630 0.00 0.00 0.00 2.17
121 122 8.500773 GGGCAAGCATGAATATAATTTGATTTG 58.499 33.333 0.00 0.00 0.00 2.32
122 123 9.263538 GGCAAGCATGAATATAATTTGATTTGA 57.736 29.630 0.00 0.00 0.00 2.69
134 135 8.915871 ATAATTTGATTTGATGAAACAGACGG 57.084 30.769 0.00 0.00 0.00 4.79
135 136 3.829886 TGATTTGATGAAACAGACGGC 57.170 42.857 0.00 0.00 0.00 5.68
136 137 2.487762 TGATTTGATGAAACAGACGGCC 59.512 45.455 0.00 0.00 0.00 6.13
137 138 0.871722 TTTGATGAAACAGACGGCCG 59.128 50.000 26.86 26.86 0.00 6.13
138 139 1.573829 TTGATGAAACAGACGGCCGC 61.574 55.000 28.58 18.62 0.00 6.53
139 140 1.741770 GATGAAACAGACGGCCGCT 60.742 57.895 28.58 20.80 0.00 5.52
140 141 1.696832 GATGAAACAGACGGCCGCTC 61.697 60.000 28.58 21.47 0.00 5.03
141 142 3.119096 GAAACAGACGGCCGCTCC 61.119 66.667 28.58 15.23 0.00 4.70
142 143 3.876589 GAAACAGACGGCCGCTCCA 62.877 63.158 28.58 0.00 34.01 3.86
143 144 3.469863 AAACAGACGGCCGCTCCAA 62.470 57.895 28.58 0.00 34.01 3.53
144 145 2.951475 AAACAGACGGCCGCTCCAAA 62.951 55.000 28.58 0.00 34.01 3.28
145 146 2.668212 CAGACGGCCGCTCCAAAA 60.668 61.111 28.58 0.00 34.01 2.44
146 147 2.112297 AGACGGCCGCTCCAAAAA 59.888 55.556 28.58 0.00 34.01 1.94
168 169 4.616181 AAAACTTGAAACAGACCGAGTG 57.384 40.909 0.00 0.00 0.00 3.51
169 170 2.240493 ACTTGAAACAGACCGAGTGG 57.760 50.000 0.00 0.00 42.84 4.00
170 171 0.868406 CTTGAAACAGACCGAGTGGC 59.132 55.000 0.00 0.00 39.70 5.01
171 172 0.468226 TTGAAACAGACCGAGTGGCT 59.532 50.000 0.00 0.00 39.70 4.75
172 173 0.249868 TGAAACAGACCGAGTGGCTG 60.250 55.000 0.00 0.00 41.96 4.85
173 174 0.033504 GAAACAGACCGAGTGGCTGA 59.966 55.000 1.31 0.00 40.00 4.26
174 175 0.468226 AAACAGACCGAGTGGCTGAA 59.532 50.000 1.31 0.00 40.00 3.02
175 176 0.468226 AACAGACCGAGTGGCTGAAA 59.532 50.000 1.31 0.00 40.00 2.69
176 177 0.468226 ACAGACCGAGTGGCTGAAAA 59.532 50.000 1.31 0.00 40.00 2.29
177 178 1.134220 ACAGACCGAGTGGCTGAAAAA 60.134 47.619 1.31 0.00 40.00 1.94
178 179 1.264288 CAGACCGAGTGGCTGAAAAAC 59.736 52.381 0.00 0.00 40.00 2.43
179 180 0.234884 GACCGAGTGGCTGAAAAACG 59.765 55.000 0.00 0.00 39.70 3.60
180 181 0.179067 ACCGAGTGGCTGAAAAACGA 60.179 50.000 0.00 0.00 39.70 3.85
181 182 0.941542 CCGAGTGGCTGAAAAACGAA 59.058 50.000 0.00 0.00 0.00 3.85
182 183 1.332375 CCGAGTGGCTGAAAAACGAAA 59.668 47.619 0.00 0.00 0.00 3.46
183 184 2.602217 CCGAGTGGCTGAAAAACGAAAG 60.602 50.000 0.00 0.00 0.00 2.62
184 185 2.286833 CGAGTGGCTGAAAAACGAAAGA 59.713 45.455 0.00 0.00 0.00 2.52
185 186 3.242608 CGAGTGGCTGAAAAACGAAAGAA 60.243 43.478 0.00 0.00 0.00 2.52
186 187 4.668289 GAGTGGCTGAAAAACGAAAGAAA 58.332 39.130 0.00 0.00 0.00 2.52
187 188 5.066968 AGTGGCTGAAAAACGAAAGAAAA 57.933 34.783 0.00 0.00 0.00 2.29
188 189 5.474825 AGTGGCTGAAAAACGAAAGAAAAA 58.525 33.333 0.00 0.00 0.00 1.94
189 190 5.347635 AGTGGCTGAAAAACGAAAGAAAAAC 59.652 36.000 0.00 0.00 0.00 2.43
190 191 5.119434 GTGGCTGAAAAACGAAAGAAAAACA 59.881 36.000 0.00 0.00 0.00 2.83
191 192 5.119434 TGGCTGAAAAACGAAAGAAAAACAC 59.881 36.000 0.00 0.00 0.00 3.32
192 193 5.237705 GCTGAAAAACGAAAGAAAAACACG 58.762 37.500 0.00 0.00 0.00 4.49
193 194 5.720164 GCTGAAAAACGAAAGAAAAACACGG 60.720 40.000 0.00 0.00 0.00 4.94
194 195 5.458891 TGAAAAACGAAAGAAAAACACGGA 58.541 33.333 0.00 0.00 0.00 4.69
195 196 5.342791 TGAAAAACGAAAGAAAAACACGGAC 59.657 36.000 0.00 0.00 0.00 4.79
196 197 3.409851 AACGAAAGAAAAACACGGACC 57.590 42.857 0.00 0.00 0.00 4.46
197 198 2.635714 ACGAAAGAAAAACACGGACCT 58.364 42.857 0.00 0.00 0.00 3.85
208 209 0.669077 CACGGACCTATCTTCCTCGG 59.331 60.000 0.00 0.00 0.00 4.63
211 212 2.092212 ACGGACCTATCTTCCTCGGTAA 60.092 50.000 0.00 0.00 0.00 2.85
216 217 2.036089 CCTATCTTCCTCGGTAAGGCAC 59.964 54.545 0.00 0.00 45.78 5.01
262 263 4.082523 CGCCACCCCGTCTGACAT 62.083 66.667 8.73 0.00 0.00 3.06
264 265 3.068881 CCACCCCGTCTGACATGT 58.931 61.111 8.73 0.00 0.00 3.21
271 273 2.436646 GTCTGACATGTGGCCCCG 60.437 66.667 1.15 0.00 0.00 5.73
340 364 4.489771 CCACCCATCCAGCGTCCC 62.490 72.222 0.00 0.00 0.00 4.46
354 378 1.081277 GTCCCTCCCCCACTCTCTT 59.919 63.158 0.00 0.00 0.00 2.85
355 379 0.978667 GTCCCTCCCCCACTCTCTTC 60.979 65.000 0.00 0.00 0.00 2.87
480 538 0.892063 GGTCGTCTCCTTCAAGCTCT 59.108 55.000 0.00 0.00 0.00 4.09
590 648 4.803426 GTGAGCACCCTCGCCTCG 62.803 72.222 0.00 0.00 41.64 4.63
613 679 2.374342 CCTCCACCCTCCCCATCT 59.626 66.667 0.00 0.00 0.00 2.90
614 680 1.768077 CCTCCACCCTCCCCATCTC 60.768 68.421 0.00 0.00 0.00 2.75
615 681 1.768077 CTCCACCCTCCCCATCTCC 60.768 68.421 0.00 0.00 0.00 3.71
621 687 1.241327 CCTCCCCATCTCCCCATCT 59.759 63.158 0.00 0.00 0.00 2.90
625 691 0.402566 CCCCATCTCCCCATCTCCTT 60.403 60.000 0.00 0.00 0.00 3.36
631 697 3.330126 TCTCCCCATCTCCTTCGTATT 57.670 47.619 0.00 0.00 0.00 1.89
632 698 4.464652 TCTCCCCATCTCCTTCGTATTA 57.535 45.455 0.00 0.00 0.00 0.98
633 699 5.011982 TCTCCCCATCTCCTTCGTATTAT 57.988 43.478 0.00 0.00 0.00 1.28
634 700 4.772624 TCTCCCCATCTCCTTCGTATTATG 59.227 45.833 0.00 0.00 0.00 1.90
635 701 3.838317 TCCCCATCTCCTTCGTATTATGG 59.162 47.826 0.00 0.00 34.85 2.74
636 702 4.207891 CCCATCTCCTTCGTATTATGGG 57.792 50.000 3.91 3.91 45.53 4.00
669 750 1.515020 GAGCGCTCACCATCTGACT 59.485 57.895 31.91 0.00 0.00 3.41
670 751 0.527385 GAGCGCTCACCATCTGACTC 60.527 60.000 31.91 0.00 0.00 3.36
767 869 1.300620 CGCCGATCCTGCCGATTTA 60.301 57.895 0.00 0.00 0.00 1.40
799 901 3.649986 CCATCCGCCCGATTTCGC 61.650 66.667 0.00 0.00 38.18 4.70
824 926 1.062002 ACACGTTTCGTTGCTCTGTTG 59.938 47.619 0.00 0.00 38.32 3.33
830 932 0.878523 TCGTTGCTCTGTTGTTCCGG 60.879 55.000 0.00 0.00 0.00 5.14
865 992 2.388890 AAAGCTCTCGTGCTGCAGGT 62.389 55.000 20.27 3.57 43.24 4.00
941 1068 1.548973 CGACAAGGTCTGTGTGCGAC 61.549 60.000 0.00 0.00 38.84 5.19
942 1069 1.548973 GACAAGGTCTGTGTGCGACG 61.549 60.000 0.00 0.00 38.84 5.12
943 1070 1.299850 CAAGGTCTGTGTGCGACGA 60.300 57.895 0.00 0.00 32.24 4.20
944 1071 1.299926 AAGGTCTGTGTGCGACGAC 60.300 57.895 0.00 0.00 32.24 4.34
966 1108 2.720578 CGCTGCTACATGTTTGTTTGTG 59.279 45.455 2.30 0.00 37.28 3.33
968 1110 4.111916 GCTGCTACATGTTTGTTTGTGTT 58.888 39.130 2.30 0.00 37.28 3.32
969 1111 4.026640 GCTGCTACATGTTTGTTTGTGTTG 60.027 41.667 2.30 0.00 37.28 3.33
975 1117 6.610741 ACATGTTTGTTTGTGTTGTTTGTT 57.389 29.167 0.00 0.00 29.55 2.83
976 1118 7.715265 ACATGTTTGTTTGTGTTGTTTGTTA 57.285 28.000 0.00 0.00 29.55 2.41
992 1140 8.454106 GTTGTTTGTTATACTTGATGATGCTCT 58.546 33.333 0.00 0.00 0.00 4.09
1024 1172 2.594529 CGAATCTGTTGGTTTCGGTG 57.405 50.000 0.00 0.00 41.02 4.94
1025 1173 1.399727 CGAATCTGTTGGTTTCGGTGC 60.400 52.381 0.00 0.00 41.02 5.01
1026 1174 1.880027 GAATCTGTTGGTTTCGGTGCT 59.120 47.619 0.00 0.00 0.00 4.40
1027 1175 1.523758 ATCTGTTGGTTTCGGTGCTC 58.476 50.000 0.00 0.00 0.00 4.26
1028 1176 0.468226 TCTGTTGGTTTCGGTGCTCT 59.532 50.000 0.00 0.00 0.00 4.09
1029 1177 0.588252 CTGTTGGTTTCGGTGCTCTG 59.412 55.000 0.00 0.00 0.00 3.35
1030 1178 0.107410 TGTTGGTTTCGGTGCTCTGT 60.107 50.000 0.00 0.00 0.00 3.41
1068 1216 3.940852 TGTTTCTGATTGGTGATGATCCG 59.059 43.478 0.00 0.00 0.00 4.18
1085 1233 0.976073 CCGGAGAGGAAGCCCTACAA 60.976 60.000 0.00 0.00 44.53 2.41
1099 1247 1.492176 CCTACAACAGGGCATCCAGAT 59.508 52.381 0.00 0.00 41.26 2.90
1107 1255 0.035176 GGGCATCCAGATCTCTGCTC 59.965 60.000 16.75 11.73 42.47 4.26
1124 1272 1.536284 GCTCTCTGTACGTATGGTGCC 60.536 57.143 0.00 0.00 0.00 5.01
1128 1276 1.411246 TCTGTACGTATGGTGCCCATC 59.589 52.381 9.67 2.93 40.74 3.51
1144 1292 3.120165 GCCCATCTCGTTTTTCTCTGAAC 60.120 47.826 0.00 0.00 0.00 3.18
1163 1316 2.125225 GTCAAGGGGAGAGGGGGT 59.875 66.667 0.00 0.00 0.00 4.95
1165 1318 2.124996 CAAGGGGAGAGGGGGTGA 59.875 66.667 0.00 0.00 0.00 4.02
1194 1349 4.479158 GCCTGGGGGTAATTAATCATGAA 58.521 43.478 0.00 0.00 34.45 2.57
1227 1391 9.849166 TTCAAGTTACAGAAACAAGGTAAAAAG 57.151 29.630 0.00 0.00 40.83 2.27
1246 1411 4.634012 AAGTGGGTGAGTAATTGCACTA 57.366 40.909 0.00 0.00 35.43 2.74
1270 1435 0.108138 GTGGGTGCTAGACTTCGCAT 60.108 55.000 0.00 0.00 38.56 4.73
1336 1514 1.380785 AGACCATGGCAGGGCATTG 60.381 57.895 19.71 5.51 40.05 2.82
1344 1522 1.582968 GCAGGGCATTGTGACTGTG 59.417 57.895 0.00 0.00 33.62 3.66
1347 1525 1.902918 GGGCATTGTGACTGTGGCA 60.903 57.895 13.93 0.00 39.87 4.92
1358 1536 3.932089 GTGACTGTGGCAAAATTTGTTGT 59.068 39.130 7.60 0.26 0.00 3.32
1374 1552 6.618287 TTTGTTGTCCACACTATTCTCTTG 57.382 37.500 0.00 0.00 33.98 3.02
1436 1614 6.500684 TTTCATAGAGCCACTGAACATTTC 57.499 37.500 0.00 0.00 0.00 2.17
1443 1621 7.472334 AGAGCCACTGAACATTTCATATTTT 57.528 32.000 0.00 0.00 39.30 1.82
1452 1630 8.266392 TGAACATTTCATATTTTTGGGATTGC 57.734 30.769 0.00 0.00 34.08 3.56
1557 1761 4.010349 AGAGCACCCTTAACAAGTTATGC 58.990 43.478 7.75 7.75 0.00 3.14
1614 1818 5.764686 TGACAGTTTCTTGTAGTGCATCATT 59.235 36.000 0.00 0.00 0.00 2.57
1692 1899 5.902613 TGCCTAAAGATATATTGCATGGC 57.097 39.130 10.90 10.90 37.38 4.40
1805 2015 6.909550 ATGTGGGCTTTCTTTACATTGTAA 57.090 33.333 5.14 5.14 0.00 2.41
1806 2016 6.079424 TGTGGGCTTTCTTTACATTGTAAC 57.921 37.500 8.75 0.00 0.00 2.50
1904 2117 4.530875 ACAGAATTGCTCTTAGATTGGGG 58.469 43.478 0.00 0.00 29.07 4.96
1979 2192 1.237285 ACGAGCAATTGGTCAGCACC 61.237 55.000 30.87 9.57 42.28 5.01
2118 2332 1.485124 CCAGGCTTAATTTGGACCCC 58.515 55.000 0.00 0.00 33.76 4.95
2139 2353 2.220653 AGCCATGCCTTGAAAAGCTA 57.779 45.000 0.00 0.00 44.44 3.32
2263 2477 7.329499 TGTGCCAAATTGTATGCAAATAGATT 58.671 30.769 0.00 0.00 38.21 2.40
2289 2503 6.461110 TTTAGGTCTACATAAGGGAAGACG 57.539 41.667 0.00 0.00 39.39 4.18
2360 2574 0.905809 ATGCAAGCCCAAGGAATGCA 60.906 50.000 13.77 13.77 45.00 3.96
2380 2594 1.071987 CTCCTGTGAAGGTGCAGCA 59.928 57.895 19.63 0.00 0.00 4.41
2381 2595 0.954449 CTCCTGTGAAGGTGCAGCAG 60.954 60.000 19.63 5.93 0.00 4.24
2382 2596 1.228063 CCTGTGAAGGTGCAGCAGT 60.228 57.895 19.63 5.10 0.00 4.40
2383 2597 0.035317 CCTGTGAAGGTGCAGCAGTA 59.965 55.000 19.63 0.00 0.00 2.74
2384 2598 1.339438 CCTGTGAAGGTGCAGCAGTAT 60.339 52.381 19.63 0.58 0.00 2.12
2385 2599 1.736126 CTGTGAAGGTGCAGCAGTATG 59.264 52.381 19.63 0.00 40.87 2.39
2401 2615 5.752892 CAGTATGCATTGAGAATTCAGCT 57.247 39.130 3.54 0.00 34.15 4.24
2402 2616 5.749620 CAGTATGCATTGAGAATTCAGCTC 58.250 41.667 3.54 0.00 34.15 4.09
2403 2617 5.527951 CAGTATGCATTGAGAATTCAGCTCT 59.472 40.000 3.54 0.00 34.15 4.09
2404 2618 6.704937 CAGTATGCATTGAGAATTCAGCTCTA 59.295 38.462 3.54 0.00 34.15 2.43
2405 2619 6.930164 AGTATGCATTGAGAATTCAGCTCTAG 59.070 38.462 3.54 0.00 34.15 2.43
2406 2620 5.349061 TGCATTGAGAATTCAGCTCTAGA 57.651 39.130 8.44 0.00 34.15 2.43
2407 2621 5.737860 TGCATTGAGAATTCAGCTCTAGAA 58.262 37.500 8.44 0.00 34.15 2.10
2408 2622 5.816258 TGCATTGAGAATTCAGCTCTAGAAG 59.184 40.000 8.44 0.00 34.15 2.85
2409 2623 5.816777 GCATTGAGAATTCAGCTCTAGAAGT 59.183 40.000 8.44 0.00 34.15 3.01
2410 2624 6.238157 GCATTGAGAATTCAGCTCTAGAAGTG 60.238 42.308 8.44 0.00 34.15 3.16
2411 2625 5.991933 TGAGAATTCAGCTCTAGAAGTGT 57.008 39.130 8.44 0.00 33.57 3.55
2412 2626 6.352016 TGAGAATTCAGCTCTAGAAGTGTT 57.648 37.500 8.44 0.00 33.57 3.32
2413 2627 6.162079 TGAGAATTCAGCTCTAGAAGTGTTG 58.838 40.000 8.44 0.00 33.57 3.33
2414 2628 4.934602 AGAATTCAGCTCTAGAAGTGTTGC 59.065 41.667 8.44 0.00 0.00 4.17
2415 2629 2.751166 TCAGCTCTAGAAGTGTTGCC 57.249 50.000 0.00 0.00 0.00 4.52
2416 2630 1.970640 TCAGCTCTAGAAGTGTTGCCA 59.029 47.619 0.00 0.00 0.00 4.92
2417 2631 2.368548 TCAGCTCTAGAAGTGTTGCCAA 59.631 45.455 0.00 0.00 0.00 4.52
2418 2632 2.740981 CAGCTCTAGAAGTGTTGCCAAG 59.259 50.000 0.00 0.00 0.00 3.61
2419 2633 1.466558 GCTCTAGAAGTGTTGCCAAGC 59.533 52.381 0.00 0.00 0.00 4.01
2420 2634 1.728971 CTCTAGAAGTGTTGCCAAGCG 59.271 52.381 0.00 0.00 0.00 4.68
2421 2635 0.798776 CTAGAAGTGTTGCCAAGCGG 59.201 55.000 0.00 0.00 0.00 5.52
2422 2636 0.394938 TAGAAGTGTTGCCAAGCGGA 59.605 50.000 0.00 0.00 0.00 5.54
2423 2637 0.465460 AGAAGTGTTGCCAAGCGGAA 60.465 50.000 0.00 0.00 0.00 4.30
2424 2638 0.598065 GAAGTGTTGCCAAGCGGAAT 59.402 50.000 0.00 0.00 0.00 3.01
2425 2639 1.810151 GAAGTGTTGCCAAGCGGAATA 59.190 47.619 0.00 0.00 0.00 1.75
2426 2640 1.165270 AGTGTTGCCAAGCGGAATAC 58.835 50.000 0.00 0.00 0.00 1.89
2427 2641 1.165270 GTGTTGCCAAGCGGAATACT 58.835 50.000 0.00 0.00 0.00 2.12
2428 2642 1.135689 GTGTTGCCAAGCGGAATACTG 60.136 52.381 0.00 0.00 0.00 2.74
2429 2643 1.271108 TGTTGCCAAGCGGAATACTGA 60.271 47.619 0.00 0.00 0.00 3.41
2430 2644 1.398390 GTTGCCAAGCGGAATACTGAG 59.602 52.381 0.00 0.00 0.00 3.35
2431 2645 0.744414 TGCCAAGCGGAATACTGAGC 60.744 55.000 0.00 0.00 0.00 4.26
2432 2646 0.462759 GCCAAGCGGAATACTGAGCT 60.463 55.000 0.00 0.00 42.35 4.09
2433 2647 1.293924 CCAAGCGGAATACTGAGCTG 58.706 55.000 0.00 0.00 40.17 4.24
2434 2648 0.654683 CAAGCGGAATACTGAGCTGC 59.345 55.000 0.00 0.00 40.17 5.25
2435 2649 0.539051 AAGCGGAATACTGAGCTGCT 59.461 50.000 0.00 0.00 45.57 4.24
2436 2650 0.103937 AGCGGAATACTGAGCTGCTC 59.896 55.000 22.38 22.38 39.98 4.26
2437 2651 1.211818 GCGGAATACTGAGCTGCTCG 61.212 60.000 23.35 19.36 32.35 5.03
2438 2652 1.211818 CGGAATACTGAGCTGCTCGC 61.212 60.000 23.35 3.22 39.57 5.03
2439 2653 0.878086 GGAATACTGAGCTGCTCGCC 60.878 60.000 23.35 13.60 40.39 5.54
2440 2654 0.179100 GAATACTGAGCTGCTCGCCA 60.179 55.000 23.35 11.59 40.39 5.69
2441 2655 0.179089 AATACTGAGCTGCTCGCCAG 60.179 55.000 23.35 18.07 44.67 4.85
2442 2656 1.326213 ATACTGAGCTGCTCGCCAGT 61.326 55.000 23.35 22.24 45.64 4.00
2443 2657 2.218037 TACTGAGCTGCTCGCCAGTG 62.218 60.000 24.50 13.70 44.43 3.66
2444 2658 3.292500 CTGAGCTGCTCGCCAGTGA 62.293 63.158 23.35 4.42 43.71 3.41
2445 2659 2.047844 GAGCTGCTCGCCAGTGAA 60.048 61.111 14.68 0.00 43.71 3.18
2446 2660 1.449246 GAGCTGCTCGCCAGTGAAT 60.449 57.895 14.68 0.00 43.71 2.57
2447 2661 1.002868 AGCTGCTCGCCAGTGAATT 60.003 52.632 0.00 0.00 43.71 2.17
2448 2662 1.136147 GCTGCTCGCCAGTGAATTG 59.864 57.895 0.00 0.00 43.71 2.32
2449 2663 1.580845 GCTGCTCGCCAGTGAATTGT 61.581 55.000 0.00 0.00 43.71 2.71
2450 2664 0.445436 CTGCTCGCCAGTGAATTGTC 59.555 55.000 0.00 0.00 36.79 3.18
2451 2665 0.955428 TGCTCGCCAGTGAATTGTCC 60.955 55.000 0.00 0.00 0.00 4.02
2452 2666 0.955428 GCTCGCCAGTGAATTGTCCA 60.955 55.000 0.00 0.00 0.00 4.02
2453 2667 1.742761 CTCGCCAGTGAATTGTCCAT 58.257 50.000 0.00 0.00 0.00 3.41
2454 2668 1.667724 CTCGCCAGTGAATTGTCCATC 59.332 52.381 0.00 0.00 0.00 3.51
2455 2669 1.003003 TCGCCAGTGAATTGTCCATCA 59.997 47.619 0.00 0.00 0.00 3.07
2456 2670 1.131126 CGCCAGTGAATTGTCCATCAC 59.869 52.381 0.00 0.00 44.92 3.06
2457 2671 1.474077 GCCAGTGAATTGTCCATCACC 59.526 52.381 2.52 0.00 45.55 4.02
2458 2672 2.881403 GCCAGTGAATTGTCCATCACCT 60.881 50.000 2.52 0.00 45.55 4.00
2459 2673 3.012518 CCAGTGAATTGTCCATCACCTC 58.987 50.000 2.52 0.00 45.55 3.85
2460 2674 3.012518 CAGTGAATTGTCCATCACCTCC 58.987 50.000 2.52 0.00 45.55 4.30
2461 2675 2.025887 AGTGAATTGTCCATCACCTCCC 60.026 50.000 2.52 0.00 45.55 4.30
2462 2676 1.284785 TGAATTGTCCATCACCTCCCC 59.715 52.381 0.00 0.00 0.00 4.81
2463 2677 1.284785 GAATTGTCCATCACCTCCCCA 59.715 52.381 0.00 0.00 0.00 4.96
2464 2678 1.381867 ATTGTCCATCACCTCCCCAA 58.618 50.000 0.00 0.00 0.00 4.12
2465 2679 0.698238 TTGTCCATCACCTCCCCAAG 59.302 55.000 0.00 0.00 0.00 3.61
2466 2680 0.475632 TGTCCATCACCTCCCCAAGT 60.476 55.000 0.00 0.00 0.00 3.16
2467 2681 0.698818 GTCCATCACCTCCCCAAGTT 59.301 55.000 0.00 0.00 0.00 2.66
2468 2682 1.913419 GTCCATCACCTCCCCAAGTTA 59.087 52.381 0.00 0.00 0.00 2.24
2469 2683 2.307686 GTCCATCACCTCCCCAAGTTAA 59.692 50.000 0.00 0.00 0.00 2.01
2470 2684 2.307686 TCCATCACCTCCCCAAGTTAAC 59.692 50.000 0.00 0.00 0.00 2.01
2471 2685 2.041081 CCATCACCTCCCCAAGTTAACA 59.959 50.000 8.61 0.00 0.00 2.41
2472 2686 2.943036 TCACCTCCCCAAGTTAACAC 57.057 50.000 8.61 0.00 0.00 3.32
2473 2687 2.128535 TCACCTCCCCAAGTTAACACA 58.871 47.619 8.61 0.00 0.00 3.72
2474 2688 2.105821 TCACCTCCCCAAGTTAACACAG 59.894 50.000 8.61 0.00 0.00 3.66
2475 2689 1.202891 ACCTCCCCAAGTTAACACAGC 60.203 52.381 8.61 0.00 0.00 4.40
2476 2690 1.202879 CCTCCCCAAGTTAACACAGCA 60.203 52.381 8.61 0.00 0.00 4.41
2477 2691 2.154462 CTCCCCAAGTTAACACAGCAG 58.846 52.381 8.61 0.00 0.00 4.24
2478 2692 1.493022 TCCCCAAGTTAACACAGCAGT 59.507 47.619 8.61 0.00 0.00 4.40
2479 2693 2.706723 TCCCCAAGTTAACACAGCAGTA 59.293 45.455 8.61 0.00 0.00 2.74
2480 2694 3.329520 TCCCCAAGTTAACACAGCAGTAT 59.670 43.478 8.61 0.00 0.00 2.12
2481 2695 3.440173 CCCCAAGTTAACACAGCAGTATG 59.560 47.826 8.61 0.00 40.87 2.39
2497 2711 5.752892 CAGTATGCATTGAGAATTCAGCT 57.247 39.130 3.54 0.00 34.15 4.24
2498 2712 5.749620 CAGTATGCATTGAGAATTCAGCTC 58.250 41.667 3.54 0.00 34.15 4.09
2499 2713 5.527951 CAGTATGCATTGAGAATTCAGCTCT 59.472 40.000 3.54 0.00 34.15 4.09
2500 2714 6.704937 CAGTATGCATTGAGAATTCAGCTCTA 59.295 38.462 3.54 0.00 34.15 2.43
2501 2715 6.930164 AGTATGCATTGAGAATTCAGCTCTAG 59.070 38.462 3.54 0.00 34.15 2.43
2502 2716 5.349061 TGCATTGAGAATTCAGCTCTAGA 57.651 39.130 8.44 0.00 34.15 2.43
2503 2717 5.737860 TGCATTGAGAATTCAGCTCTAGAA 58.262 37.500 8.44 0.00 34.15 2.10
2504 2718 5.816258 TGCATTGAGAATTCAGCTCTAGAAG 59.184 40.000 8.44 0.00 34.15 2.85
2505 2719 5.816777 GCATTGAGAATTCAGCTCTAGAAGT 59.183 40.000 8.44 0.00 34.15 3.01
2506 2720 6.018832 GCATTGAGAATTCAGCTCTAGAAGTC 60.019 42.308 8.44 4.96 39.59 3.01
2508 2722 6.849085 TGAGAATTCAGCTCTAGAAGTCTT 57.151 37.500 14.17 2.13 46.59 3.01
2509 2723 6.862209 TGAGAATTCAGCTCTAGAAGTCTTC 58.138 40.000 14.17 4.26 46.59 2.87
2510 2724 6.127479 TGAGAATTCAGCTCTAGAAGTCTTCC 60.127 42.308 14.17 5.88 46.59 3.46
2511 2725 5.128663 AGAATTCAGCTCTAGAAGTCTTCCC 59.871 44.000 8.44 0.00 45.00 3.97
2512 2726 3.458044 TCAGCTCTAGAAGTCTTCCCA 57.542 47.619 9.04 0.00 0.00 4.37
2513 2727 3.779444 TCAGCTCTAGAAGTCTTCCCAA 58.221 45.455 9.04 0.00 0.00 4.12
2514 2728 3.766591 TCAGCTCTAGAAGTCTTCCCAAG 59.233 47.826 9.04 5.13 0.00 3.61
2515 2729 2.499693 AGCTCTAGAAGTCTTCCCAAGC 59.500 50.000 16.99 16.99 0.00 4.01
2516 2730 2.737039 GCTCTAGAAGTCTTCCCAAGCG 60.737 54.545 9.04 1.71 0.00 4.68
2517 2731 1.825474 TCTAGAAGTCTTCCCAAGCGG 59.175 52.381 9.04 0.00 0.00 5.52
2518 2732 1.825474 CTAGAAGTCTTCCCAAGCGGA 59.175 52.381 9.04 0.00 39.68 5.54
2526 2740 2.691409 TTCCCAAGCGGAATACTGAG 57.309 50.000 0.00 0.00 46.27 3.35
2527 2741 0.178068 TCCCAAGCGGAATACTGAGC 59.822 55.000 0.00 0.00 37.88 4.26
2528 2742 0.179000 CCCAAGCGGAATACTGAGCT 59.821 55.000 0.00 0.00 42.35 4.09
2529 2743 1.293924 CCAAGCGGAATACTGAGCTG 58.706 55.000 0.00 0.00 40.17 4.24
2530 2744 0.654683 CAAGCGGAATACTGAGCTGC 59.345 55.000 0.00 0.00 40.17 5.25
2531 2745 0.539051 AAGCGGAATACTGAGCTGCT 59.461 50.000 0.00 0.00 45.57 4.24
2532 2746 0.103937 AGCGGAATACTGAGCTGCTC 59.896 55.000 22.38 22.38 39.98 4.26
2533 2747 1.211818 GCGGAATACTGAGCTGCTCG 61.212 60.000 23.35 19.36 32.35 5.03
2534 2748 1.211818 CGGAATACTGAGCTGCTCGC 61.212 60.000 23.35 3.22 39.57 5.03
2535 2749 0.878086 GGAATACTGAGCTGCTCGCC 60.878 60.000 23.35 13.60 40.39 5.54
2536 2750 0.179100 GAATACTGAGCTGCTCGCCA 60.179 55.000 23.35 11.59 40.39 5.69
2537 2751 0.179089 AATACTGAGCTGCTCGCCAG 60.179 55.000 23.35 18.07 44.67 4.85
2538 2752 1.326213 ATACTGAGCTGCTCGCCAGT 61.326 55.000 23.35 22.24 45.64 4.00
2539 2753 2.218037 TACTGAGCTGCTCGCCAGTG 62.218 60.000 24.50 13.70 44.43 3.66
2540 2754 3.292500 CTGAGCTGCTCGCCAGTGA 62.293 63.158 23.35 4.42 43.71 3.41
2541 2755 2.047844 GAGCTGCTCGCCAGTGAA 60.048 61.111 14.68 0.00 43.71 3.18
2542 2756 1.449246 GAGCTGCTCGCCAGTGAAT 60.449 57.895 14.68 0.00 43.71 2.57
2543 2757 1.002868 AGCTGCTCGCCAGTGAATT 60.003 52.632 0.00 0.00 43.71 2.17
2544 2758 1.136147 GCTGCTCGCCAGTGAATTG 59.864 57.895 0.00 0.00 43.71 2.32
2545 2759 1.580845 GCTGCTCGCCAGTGAATTGT 61.581 55.000 0.00 0.00 43.71 2.71
2546 2760 0.445436 CTGCTCGCCAGTGAATTGTC 59.555 55.000 0.00 0.00 36.79 3.18
2547 2761 0.955428 TGCTCGCCAGTGAATTGTCC 60.955 55.000 0.00 0.00 0.00 4.02
2548 2762 0.955428 GCTCGCCAGTGAATTGTCCA 60.955 55.000 0.00 0.00 0.00 4.02
2549 2763 1.742761 CTCGCCAGTGAATTGTCCAT 58.257 50.000 0.00 0.00 0.00 3.41
2550 2764 1.667724 CTCGCCAGTGAATTGTCCATC 59.332 52.381 0.00 0.00 0.00 3.51
2551 2765 1.003003 TCGCCAGTGAATTGTCCATCA 59.997 47.619 0.00 0.00 0.00 3.07
2552 2766 1.131126 CGCCAGTGAATTGTCCATCAC 59.869 52.381 0.00 0.00 44.92 3.06
2553 2767 1.474077 GCCAGTGAATTGTCCATCACC 59.526 52.381 2.52 0.00 45.55 4.02
2554 2768 2.881403 GCCAGTGAATTGTCCATCACCT 60.881 50.000 2.52 0.00 45.55 4.00
2555 2769 3.012518 CCAGTGAATTGTCCATCACCTC 58.987 50.000 2.52 0.00 45.55 3.85
2556 2770 3.012518 CAGTGAATTGTCCATCACCTCC 58.987 50.000 2.52 0.00 45.55 4.30
2557 2771 2.025887 AGTGAATTGTCCATCACCTCCC 60.026 50.000 2.52 0.00 45.55 4.30
2558 2772 1.284785 TGAATTGTCCATCACCTCCCC 59.715 52.381 0.00 0.00 0.00 4.81
2559 2773 1.284785 GAATTGTCCATCACCTCCCCA 59.715 52.381 0.00 0.00 0.00 4.96
2560 2774 1.381867 ATTGTCCATCACCTCCCCAA 58.618 50.000 0.00 0.00 0.00 4.12
2561 2775 0.698238 TTGTCCATCACCTCCCCAAG 59.302 55.000 0.00 0.00 0.00 3.61
2562 2776 0.475632 TGTCCATCACCTCCCCAAGT 60.476 55.000 0.00 0.00 0.00 3.16
2563 2777 0.698818 GTCCATCACCTCCCCAAGTT 59.301 55.000 0.00 0.00 0.00 2.66
2564 2778 1.913419 GTCCATCACCTCCCCAAGTTA 59.087 52.381 0.00 0.00 0.00 2.24
2565 2779 2.307686 GTCCATCACCTCCCCAAGTTAA 59.692 50.000 0.00 0.00 0.00 2.01
2566 2780 2.307686 TCCATCACCTCCCCAAGTTAAC 59.692 50.000 0.00 0.00 0.00 2.01
2567 2781 2.041081 CCATCACCTCCCCAAGTTAACA 59.959 50.000 8.61 0.00 0.00 2.41
2568 2782 2.943036 TCACCTCCCCAAGTTAACAC 57.057 50.000 8.61 0.00 0.00 3.32
2569 2783 2.128535 TCACCTCCCCAAGTTAACACA 58.871 47.619 8.61 0.00 0.00 3.72
2570 2784 2.105821 TCACCTCCCCAAGTTAACACAG 59.894 50.000 8.61 0.00 0.00 3.66
2571 2785 2.105821 CACCTCCCCAAGTTAACACAGA 59.894 50.000 8.61 0.00 0.00 3.41
2731 2945 5.118990 TGCTCTTCTACCATTATCAACAGC 58.881 41.667 0.00 0.00 0.00 4.40
2737 2951 3.641434 ACCATTATCAACAGCTCTGCT 57.359 42.857 0.00 0.00 40.77 4.24
2749 2963 3.196463 CAGCTCTGCTTTCTGTGATAGG 58.804 50.000 0.00 0.00 36.40 2.57
2825 3042 0.664767 GCAGGCGGACTTAGCTATCG 60.665 60.000 0.00 0.00 34.52 2.92
2848 3065 5.393027 CGTGAAGGTTGATCATAAAAAGGGG 60.393 44.000 0.00 0.00 0.00 4.79
3117 3334 4.982241 TCTCAACTCCTTCCTTGAACAT 57.018 40.909 0.00 0.00 0.00 2.71
3118 3335 6.433847 TTCTCAACTCCTTCCTTGAACATA 57.566 37.500 0.00 0.00 0.00 2.29
3119 3336 6.433847 TCTCAACTCCTTCCTTGAACATAA 57.566 37.500 0.00 0.00 0.00 1.90
3199 3416 2.910319 ACTGCCAGTTGAGGTTATGGTA 59.090 45.455 0.00 0.00 35.17 3.25
3224 3441 0.243636 GACCATGGGCAAAAAGGACG 59.756 55.000 14.59 0.00 0.00 4.79
3226 3443 1.202952 ACCATGGGCAAAAAGGACGTA 60.203 47.619 18.09 0.00 0.00 3.57
3291 3508 2.447047 ACCCACTTCCTTCCTTCAACAT 59.553 45.455 0.00 0.00 0.00 2.71
3377 3596 3.498777 GGTTGAGGTCAAGTTAGAACAGC 59.501 47.826 0.00 0.00 36.39 4.40
3436 3655 1.185618 TCCCGACCACTCTTCCACAG 61.186 60.000 0.00 0.00 0.00 3.66
3438 3657 1.254026 CCGACCACTCTTCCACAGTA 58.746 55.000 0.00 0.00 0.00 2.74
3454 3673 5.763204 TCCACAGTATTCCTTGAACAGAAAC 59.237 40.000 0.00 0.00 0.00 2.78
3619 3838 3.968649 TGCAAGTTCAAGAAATGCAGAC 58.031 40.909 16.07 0.00 39.16 3.51
3621 3840 3.303990 GCAAGTTCAAGAAATGCAGACGA 60.304 43.478 13.69 0.00 36.21 4.20
3663 3882 0.263765 TCTACGGAGCCCCAACCTAT 59.736 55.000 0.00 0.00 0.00 2.57
3716 3935 3.070018 ACCATTTCTCTGAACGAGCAAG 58.930 45.455 0.00 0.00 39.70 4.01
3724 3943 4.816385 TCTCTGAACGAGCAAGTCAATTTT 59.184 37.500 0.00 0.00 39.70 1.82
3771 3990 0.034896 ATTCTGGTCAGGCGTTCGTT 59.965 50.000 0.00 0.00 0.00 3.85
3817 4036 4.710375 CCAGGTGTTACTGATGGTACTAGT 59.290 45.833 0.00 0.00 40.97 2.57
3996 4224 1.066143 CGGTAGAACTGGTGCCAGAAT 60.066 52.381 23.55 12.19 46.30 2.40
3997 4225 2.615493 CGGTAGAACTGGTGCCAGAATT 60.615 50.000 23.55 9.25 46.30 2.17
3998 4226 3.369052 CGGTAGAACTGGTGCCAGAATTA 60.369 47.826 23.55 9.86 46.30 1.40
3999 4227 4.683400 CGGTAGAACTGGTGCCAGAATTAT 60.683 45.833 23.55 9.13 46.30 1.28
4000 4228 5.193679 GGTAGAACTGGTGCCAGAATTATT 58.806 41.667 23.55 7.86 46.30 1.40
4001 4229 5.066505 GGTAGAACTGGTGCCAGAATTATTG 59.933 44.000 23.55 0.00 46.30 1.90
4002 4230 4.922206 AGAACTGGTGCCAGAATTATTGA 58.078 39.130 23.55 0.00 46.30 2.57
4003 4231 5.324409 AGAACTGGTGCCAGAATTATTGAA 58.676 37.500 23.55 0.00 46.30 2.69
4004 4232 5.416952 AGAACTGGTGCCAGAATTATTGAAG 59.583 40.000 23.55 0.00 46.30 3.02
4005 4233 4.666512 ACTGGTGCCAGAATTATTGAAGT 58.333 39.130 23.55 0.00 46.30 3.01
4006 4234 5.079643 ACTGGTGCCAGAATTATTGAAGTT 58.920 37.500 23.55 0.00 46.30 2.66
4007 4235 5.183904 ACTGGTGCCAGAATTATTGAAGTTC 59.816 40.000 23.55 0.00 46.30 3.01
4152 4402 2.171448 GTGCTGAGGGAAGTCCATACAT 59.829 50.000 0.00 0.00 38.24 2.29
4181 4431 5.627182 AGAGACCATTTCATGCTGTCTAT 57.373 39.130 0.00 0.00 33.73 1.98
4217 4467 8.969267 CGAAACATACTCGAAATATTAGAAGCT 58.031 33.333 0.00 0.00 38.61 3.74
4280 4530 1.452110 TTCTGCTTGTGCACGCATAT 58.548 45.000 17.97 0.00 45.31 1.78
4614 4867 4.789012 TTGTCTTCCAAGGCATTCATTC 57.211 40.909 0.00 0.00 40.84 2.67
4622 4875 3.922240 CCAAGGCATTCATTCTTTTGACG 59.078 43.478 0.00 0.00 0.00 4.35
4623 4876 3.855689 AGGCATTCATTCTTTTGACGG 57.144 42.857 0.00 0.00 0.00 4.79
4656 4909 3.214696 ACCTTTCTGTCTTTGTCTGGG 57.785 47.619 0.00 0.00 0.00 4.45
4663 4916 6.693315 TTCTGTCTTTGTCTGGGTAAAAAG 57.307 37.500 0.00 0.00 0.00 2.27
4703 4958 2.526304 TGCCACTAGTCACTGACAAC 57.474 50.000 11.80 0.00 34.60 3.32
4704 4959 1.760029 TGCCACTAGTCACTGACAACA 59.240 47.619 11.80 0.00 34.60 3.33
4706 4961 3.202906 GCCACTAGTCACTGACAACAAA 58.797 45.455 11.80 0.00 34.60 2.83
4789 5072 3.689347 AGTTGCTGCACTGGATGATTTA 58.311 40.909 0.00 0.00 0.00 1.40
4794 5077 6.040209 TGCTGCACTGGATGATTTATTTTT 57.960 33.333 0.00 0.00 0.00 1.94
4875 5158 4.527564 GGTTGTATATGCAGATGAAACGC 58.472 43.478 3.54 0.21 0.00 4.84
4954 5237 7.497249 CACAGGTAAGATGAGGATTCCTTTTAG 59.503 40.741 6.68 0.00 31.76 1.85
5027 5311 0.537653 TTTCCCATATCGACACGCCA 59.462 50.000 0.00 0.00 0.00 5.69
5176 5460 7.376866 GCGTTGTGATTAATGAATGTAAGGATG 59.623 37.037 0.00 0.00 0.00 3.51
5401 5691 1.153549 CAAGGGAGTACTCGGCAGC 60.154 63.158 16.56 2.28 0.00 5.25
5477 5767 4.696078 GCAACCATATGCACGCAG 57.304 55.556 0.00 0.00 45.70 5.18
5639 6038 3.920738 GCAAACACATGCACACGG 58.079 55.556 0.00 0.00 45.70 4.94
5647 6046 2.052891 CACATGCACACGGAAATGTTG 58.947 47.619 0.00 0.00 30.98 3.33
5680 6079 1.610554 CCAGAAGCAATGGGGGCAAG 61.611 60.000 0.00 0.00 33.94 4.01
5734 6133 2.412323 CAGCAGCAATGGCGGATGT 61.412 57.895 1.94 0.00 44.77 3.06
5747 6146 0.866427 CGGATGTCAGATGCTCATGC 59.134 55.000 0.00 0.00 40.20 4.06
5759 6158 0.029035 GCTCATGCAAATCCTCTGCG 59.971 55.000 0.00 0.00 42.97 5.18
5773 6172 0.756294 TCTGCGTCAAGGGAAACAGA 59.244 50.000 0.00 0.00 35.82 3.41
5780 6179 3.304659 CGTCAAGGGAAACAGAAATGGTG 60.305 47.826 0.00 0.00 0.00 4.17
5784 6183 1.273327 GGGAAACAGAAATGGTGGCTG 59.727 52.381 0.00 0.00 35.81 4.85
5797 6196 1.236628 GTGGCTGCCAGATGATCATC 58.763 55.000 24.10 25.42 38.09 2.92
5798 6197 0.841289 TGGCTGCCAGATGATCATCA 59.159 50.000 31.99 14.98 40.22 3.07
5808 6207 6.485648 TGCCAGATGATCATCATAGTTCAAAG 59.514 38.462 31.99 12.09 37.20 2.77
6032 6434 2.026822 CCCAAAGCAGACAGGATACACT 60.027 50.000 0.00 0.00 41.41 3.55
6052 6454 3.519930 GAGGGTCCGGCGAGAGAC 61.520 72.222 9.30 7.43 0.00 3.36
6069 6471 3.898123 AGAGACACACTATGACCACAAGT 59.102 43.478 0.00 0.00 0.00 3.16
6079 6481 1.354031 TGACCACAAGTATGGGTGCAT 59.646 47.619 0.00 0.00 44.81 3.96
6114 6516 2.276116 GCACCAGACTCCGACTCCA 61.276 63.158 0.00 0.00 0.00 3.86
6260 6668 4.373116 TGGAAGCCCGCAGACGAC 62.373 66.667 0.00 0.00 43.93 4.34
6309 6717 0.531974 TCACAAGCACGTTCCTGGTC 60.532 55.000 0.00 0.00 0.00 4.02
6332 6740 1.376424 CCAGCAGCTACCACCAGTG 60.376 63.158 0.00 0.00 0.00 3.66
6371 6785 0.326264 GGGATATGCTGAAGGGCGAT 59.674 55.000 0.00 0.00 34.52 4.58
6441 6859 2.638480 AGCACAGGAAGTACTTGCAA 57.362 45.000 26.40 0.00 35.57 4.08
6448 6866 4.755123 ACAGGAAGTACTTGCAACACATAC 59.245 41.667 26.40 2.82 33.04 2.39
6452 6870 6.017109 AGGAAGTACTTGCAACACATACTTTG 60.017 38.462 26.40 0.00 36.47 2.77
6488 6912 5.924475 TCGATGAAGTTCCTTCTTTTGTC 57.076 39.130 0.00 0.00 40.73 3.18
6523 6947 4.102367 TGGTTGATATATAGCAGGTGCACA 59.898 41.667 20.43 0.00 45.16 4.57
6679 7117 2.764128 CTCCTCCTGGGCGGCTAA 60.764 66.667 9.56 0.00 34.39 3.09
6683 7121 0.693049 CCTCCTGGGCGGCTAATATT 59.307 55.000 9.56 0.00 0.00 1.28
6684 7122 1.906574 CCTCCTGGGCGGCTAATATTA 59.093 52.381 9.56 0.00 0.00 0.98
6685 7123 2.505819 CCTCCTGGGCGGCTAATATTAT 59.494 50.000 9.56 0.00 0.00 1.28
6686 7124 3.709653 CCTCCTGGGCGGCTAATATTATA 59.290 47.826 9.56 0.00 0.00 0.98
6687 7125 4.443034 CCTCCTGGGCGGCTAATATTATAC 60.443 50.000 9.56 0.00 0.00 1.47
6688 7126 4.098155 TCCTGGGCGGCTAATATTATACA 58.902 43.478 9.56 0.00 0.00 2.29
6689 7127 4.161565 TCCTGGGCGGCTAATATTATACAG 59.838 45.833 9.56 3.20 0.00 2.74
6690 7128 4.081087 CCTGGGCGGCTAATATTATACAGT 60.081 45.833 9.56 0.00 0.00 3.55
6691 7129 5.128171 CCTGGGCGGCTAATATTATACAGTA 59.872 44.000 9.56 0.00 0.00 2.74
6692 7130 6.183360 CCTGGGCGGCTAATATTATACAGTAT 60.183 42.308 9.56 0.00 0.00 2.12
6693 7131 6.578944 TGGGCGGCTAATATTATACAGTATG 58.421 40.000 9.56 0.00 46.00 2.39
6694 7132 5.989777 GGGCGGCTAATATTATACAGTATGG 59.010 44.000 9.56 0.00 43.62 2.74
6695 7133 6.183360 GGGCGGCTAATATTATACAGTATGGA 60.183 42.308 9.56 0.00 43.62 3.41
6696 7134 7.442656 GGCGGCTAATATTATACAGTATGGAT 58.557 38.462 0.00 0.67 45.75 3.41
6697 7135 7.931948 GGCGGCTAATATTATACAGTATGGATT 59.068 37.037 0.00 3.22 34.52 3.01
6698 7136 9.976511 GCGGCTAATATTATACAGTATGGATTA 57.023 33.333 3.03 4.09 34.52 1.75
6710 7148 9.920946 ATACAGTATGGATTATGGAAACTTTGT 57.079 29.630 0.00 0.00 34.52 2.83
6711 7149 8.650143 ACAGTATGGATTATGGAAACTTTGTT 57.350 30.769 0.00 0.00 43.62 2.83
6712 7150 8.739972 ACAGTATGGATTATGGAAACTTTGTTC 58.260 33.333 0.00 0.00 43.62 3.18
6713 7151 8.739039 CAGTATGGATTATGGAAACTTTGTTCA 58.261 33.333 0.00 0.00 0.00 3.18
6714 7152 8.960591 AGTATGGATTATGGAAACTTTGTTCAG 58.039 33.333 0.00 0.00 0.00 3.02
6715 7153 6.588719 TGGATTATGGAAACTTTGTTCAGG 57.411 37.500 0.00 0.00 0.00 3.86
6716 7154 6.310941 TGGATTATGGAAACTTTGTTCAGGA 58.689 36.000 0.00 0.00 0.00 3.86
6717 7155 6.780031 TGGATTATGGAAACTTTGTTCAGGAA 59.220 34.615 0.00 0.00 0.00 3.36
6718 7156 7.454380 TGGATTATGGAAACTTTGTTCAGGAAT 59.546 33.333 0.00 0.00 0.00 3.01
6719 7157 7.761249 GGATTATGGAAACTTTGTTCAGGAATG 59.239 37.037 0.00 0.00 0.00 2.67
6720 7158 4.935352 TGGAAACTTTGTTCAGGAATGG 57.065 40.909 0.00 0.00 0.00 3.16
6721 7159 4.541705 TGGAAACTTTGTTCAGGAATGGA 58.458 39.130 0.00 0.00 0.00 3.41
6722 7160 4.584325 TGGAAACTTTGTTCAGGAATGGAG 59.416 41.667 0.00 0.00 0.00 3.86
6723 7161 4.584743 GGAAACTTTGTTCAGGAATGGAGT 59.415 41.667 0.00 0.00 0.00 3.85
6724 7162 5.069119 GGAAACTTTGTTCAGGAATGGAGTT 59.931 40.000 0.00 0.00 0.00 3.01
6725 7163 5.774498 AACTTTGTTCAGGAATGGAGTTC 57.226 39.130 0.00 0.00 36.04 3.01
6726 7164 5.053978 ACTTTGTTCAGGAATGGAGTTCT 57.946 39.130 0.00 0.00 37.01 3.01
6727 7165 5.449553 ACTTTGTTCAGGAATGGAGTTCTT 58.550 37.500 0.00 0.00 37.01 2.52
6728 7166 5.893824 ACTTTGTTCAGGAATGGAGTTCTTT 59.106 36.000 0.00 0.00 37.01 2.52
6729 7167 6.039829 ACTTTGTTCAGGAATGGAGTTCTTTC 59.960 38.462 0.00 0.00 37.01 2.62
6730 7168 4.398319 TGTTCAGGAATGGAGTTCTTTCC 58.602 43.478 7.85 7.85 45.15 3.13
6865 7304 7.775397 GCATTATGTTATTCAAATGCCTTGT 57.225 32.000 7.48 0.00 40.39 3.16
6893 7332 4.070716 CAATGCTTCAAAGTGAGGTCTCT 58.929 43.478 0.00 0.00 0.00 3.10
6910 7349 6.883744 AGGTCTCTTCTTTAATCCTAGCAAG 58.116 40.000 0.00 0.00 0.00 4.01
6939 7378 3.137544 TCCCACTGGAACGGCATTATTAT 59.862 43.478 0.00 0.00 37.86 1.28
6978 7417 4.033709 CCTCTCTTTCCATAACTCCCAGA 58.966 47.826 0.00 0.00 0.00 3.86
7233 7672 1.672030 CACCCATGACGCTGAAGCA 60.672 57.895 2.79 0.00 42.21 3.91
7264 7703 6.620678 CCGTCCAAATTCTATTGTTGATTGT 58.379 36.000 0.00 0.00 0.00 2.71
7442 7882 0.602638 TGACGTCAAGGTGGACATGC 60.603 55.000 17.62 0.00 37.66 4.06
7491 7931 4.470602 TCTCAGAGAGGTGTTGAACTGTA 58.529 43.478 0.00 0.00 0.00 2.74
7565 8005 2.076863 CCGAACCGAGCAATTCTTCTT 58.923 47.619 0.00 0.00 0.00 2.52
7566 8006 2.094417 CCGAACCGAGCAATTCTTCTTC 59.906 50.000 0.00 0.00 0.00 2.87
7567 8007 2.996621 CGAACCGAGCAATTCTTCTTCT 59.003 45.455 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.119329 GCACTAAAATGAGTCTAGATACATACG 57.881 37.037 12.66 0.00 0.00 3.06
11 12 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
15 16 9.069082 GGTATCTAGCACTAAAATGAGTCTAGA 57.931 37.037 11.59 11.59 38.76 2.43
16 17 9.073475 AGGTATCTAGCACTAAAATGAGTCTAG 57.927 37.037 0.00 0.00 33.29 2.43
17 18 8.998277 AGGTATCTAGCACTAAAATGAGTCTA 57.002 34.615 0.00 0.00 0.00 2.59
18 19 7.014808 GGAGGTATCTAGCACTAAAATGAGTCT 59.985 40.741 0.00 0.00 0.00 3.24
19 20 7.149307 GGAGGTATCTAGCACTAAAATGAGTC 58.851 42.308 0.00 0.00 0.00 3.36
20 21 6.239064 CGGAGGTATCTAGCACTAAAATGAGT 60.239 42.308 0.00 0.00 0.00 3.41
21 22 6.153067 CGGAGGTATCTAGCACTAAAATGAG 58.847 44.000 0.00 0.00 0.00 2.90
22 23 5.597182 ACGGAGGTATCTAGCACTAAAATGA 59.403 40.000 0.00 0.00 0.00 2.57
23 24 5.844004 ACGGAGGTATCTAGCACTAAAATG 58.156 41.667 0.00 0.00 0.00 2.32
24 25 7.778185 ATACGGAGGTATCTAGCACTAAAAT 57.222 36.000 0.00 0.00 34.18 1.82
37 38 7.834881 TGAATTTGTCTAGATACGGAGGTAT 57.165 36.000 0.00 0.00 42.01 2.73
38 39 7.558807 TCTTGAATTTGTCTAGATACGGAGGTA 59.441 37.037 0.00 0.00 33.79 3.08
39 40 6.380274 TCTTGAATTTGTCTAGATACGGAGGT 59.620 38.462 0.00 0.00 33.79 3.85
40 41 6.697892 GTCTTGAATTTGTCTAGATACGGAGG 59.302 42.308 0.00 0.00 39.77 4.30
41 42 7.258441 TGTCTTGAATTTGTCTAGATACGGAG 58.742 38.462 0.00 0.00 39.77 4.63
42 43 7.165460 TGTCTTGAATTTGTCTAGATACGGA 57.835 36.000 0.00 0.00 39.77 4.69
43 44 7.545965 ACTTGTCTTGAATTTGTCTAGATACGG 59.454 37.037 0.00 0.00 39.77 4.02
44 45 8.467402 ACTTGTCTTGAATTTGTCTAGATACG 57.533 34.615 0.00 0.00 39.77 3.06
49 50 9.746711 CGAATTACTTGTCTTGAATTTGTCTAG 57.253 33.333 0.00 0.00 0.00 2.43
50 51 9.483916 TCGAATTACTTGTCTTGAATTTGTCTA 57.516 29.630 0.00 0.00 0.00 2.59
51 52 8.378172 TCGAATTACTTGTCTTGAATTTGTCT 57.622 30.769 0.00 0.00 0.00 3.41
52 53 9.445786 TTTCGAATTACTTGTCTTGAATTTGTC 57.554 29.630 0.00 0.00 0.00 3.18
53 54 9.233232 GTTTCGAATTACTTGTCTTGAATTTGT 57.767 29.630 0.00 0.00 0.00 2.83
54 55 8.409690 CGTTTCGAATTACTTGTCTTGAATTTG 58.590 33.333 0.00 0.00 0.00 2.32
55 56 7.589954 CCGTTTCGAATTACTTGTCTTGAATTT 59.410 33.333 0.00 0.00 0.00 1.82
56 57 7.041644 TCCGTTTCGAATTACTTGTCTTGAATT 60.042 33.333 0.00 0.00 0.00 2.17
57 58 6.425721 TCCGTTTCGAATTACTTGTCTTGAAT 59.574 34.615 0.00 0.00 0.00 2.57
58 59 5.754406 TCCGTTTCGAATTACTTGTCTTGAA 59.246 36.000 0.00 0.00 0.00 2.69
59 60 5.291178 TCCGTTTCGAATTACTTGTCTTGA 58.709 37.500 0.00 0.00 0.00 3.02
60 61 5.389516 CCTCCGTTTCGAATTACTTGTCTTG 60.390 44.000 0.00 0.00 0.00 3.02
61 62 4.689345 CCTCCGTTTCGAATTACTTGTCTT 59.311 41.667 0.00 0.00 0.00 3.01
62 63 4.243270 CCTCCGTTTCGAATTACTTGTCT 58.757 43.478 0.00 0.00 0.00 3.41
63 64 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
64 65 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
65 66 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
66 67 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
67 68 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
68 69 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
69 70 4.272489 TCTACTCCCTCCGTTTCGAATTA 58.728 43.478 0.00 0.00 0.00 1.40
70 71 3.094572 TCTACTCCCTCCGTTTCGAATT 58.905 45.455 0.00 0.00 0.00 2.17
71 72 2.731572 TCTACTCCCTCCGTTTCGAAT 58.268 47.619 0.00 0.00 0.00 3.34
72 73 2.205022 TCTACTCCCTCCGTTTCGAA 57.795 50.000 0.00 0.00 0.00 3.71
73 74 2.431954 ATCTACTCCCTCCGTTTCGA 57.568 50.000 0.00 0.00 0.00 3.71
74 75 3.187700 CAAATCTACTCCCTCCGTTTCG 58.812 50.000 0.00 0.00 0.00 3.46
75 76 3.532542 CCAAATCTACTCCCTCCGTTTC 58.467 50.000 0.00 0.00 0.00 2.78
76 77 2.238898 CCCAAATCTACTCCCTCCGTTT 59.761 50.000 0.00 0.00 0.00 3.60
77 78 1.838077 CCCAAATCTACTCCCTCCGTT 59.162 52.381 0.00 0.00 0.00 4.44
78 79 1.497161 CCCAAATCTACTCCCTCCGT 58.503 55.000 0.00 0.00 0.00 4.69
79 80 0.106894 GCCCAAATCTACTCCCTCCG 59.893 60.000 0.00 0.00 0.00 4.63
80 81 1.213296 TGCCCAAATCTACTCCCTCC 58.787 55.000 0.00 0.00 0.00 4.30
81 82 2.924421 CTTGCCCAAATCTACTCCCTC 58.076 52.381 0.00 0.00 0.00 4.30
82 83 1.064389 GCTTGCCCAAATCTACTCCCT 60.064 52.381 0.00 0.00 0.00 4.20
83 84 1.340991 TGCTTGCCCAAATCTACTCCC 60.341 52.381 0.00 0.00 0.00 4.30
84 85 2.128771 TGCTTGCCCAAATCTACTCC 57.871 50.000 0.00 0.00 0.00 3.85
85 86 3.282021 TCATGCTTGCCCAAATCTACTC 58.718 45.455 0.00 0.00 0.00 2.59
86 87 3.370840 TCATGCTTGCCCAAATCTACT 57.629 42.857 0.00 0.00 0.00 2.57
87 88 4.660789 ATTCATGCTTGCCCAAATCTAC 57.339 40.909 0.00 0.00 0.00 2.59
88 89 8.654485 ATTATATTCATGCTTGCCCAAATCTA 57.346 30.769 0.00 0.00 0.00 1.98
89 90 6.982160 TTATATTCATGCTTGCCCAAATCT 57.018 33.333 0.00 0.00 0.00 2.40
90 91 8.500773 CAAATTATATTCATGCTTGCCCAAATC 58.499 33.333 0.00 0.00 0.00 2.17
91 92 8.212312 TCAAATTATATTCATGCTTGCCCAAAT 58.788 29.630 0.00 0.00 0.00 2.32
92 93 7.563020 TCAAATTATATTCATGCTTGCCCAAA 58.437 30.769 0.00 0.00 0.00 3.28
93 94 7.122138 TCAAATTATATTCATGCTTGCCCAA 57.878 32.000 0.00 0.00 0.00 4.12
94 95 6.728089 TCAAATTATATTCATGCTTGCCCA 57.272 33.333 0.00 0.00 0.00 5.36
95 96 8.500773 CAAATCAAATTATATTCATGCTTGCCC 58.499 33.333 0.00 0.00 0.00 5.36
96 97 9.263538 TCAAATCAAATTATATTCATGCTTGCC 57.736 29.630 0.00 0.00 0.00 4.52
109 110 7.489113 GCCGTCTGTTTCATCAAATCAAATTAT 59.511 33.333 0.00 0.00 0.00 1.28
110 111 6.806249 GCCGTCTGTTTCATCAAATCAAATTA 59.194 34.615 0.00 0.00 0.00 1.40
111 112 5.634859 GCCGTCTGTTTCATCAAATCAAATT 59.365 36.000 0.00 0.00 0.00 1.82
112 113 5.163513 GCCGTCTGTTTCATCAAATCAAAT 58.836 37.500 0.00 0.00 0.00 2.32
113 114 4.545610 GCCGTCTGTTTCATCAAATCAAA 58.454 39.130 0.00 0.00 0.00 2.69
114 115 3.057596 GGCCGTCTGTTTCATCAAATCAA 60.058 43.478 0.00 0.00 0.00 2.57
115 116 2.487762 GGCCGTCTGTTTCATCAAATCA 59.512 45.455 0.00 0.00 0.00 2.57
116 117 2.476185 CGGCCGTCTGTTTCATCAAATC 60.476 50.000 19.50 0.00 0.00 2.17
117 118 1.468520 CGGCCGTCTGTTTCATCAAAT 59.531 47.619 19.50 0.00 0.00 2.32
118 119 0.871722 CGGCCGTCTGTTTCATCAAA 59.128 50.000 19.50 0.00 0.00 2.69
119 120 1.573829 GCGGCCGTCTGTTTCATCAA 61.574 55.000 28.70 0.00 0.00 2.57
120 121 2.032634 GCGGCCGTCTGTTTCATCA 61.033 57.895 28.70 0.00 0.00 3.07
121 122 1.696832 GAGCGGCCGTCTGTTTCATC 61.697 60.000 28.70 5.38 0.00 2.92
122 123 1.741770 GAGCGGCCGTCTGTTTCAT 60.742 57.895 28.70 0.81 0.00 2.57
123 124 2.357034 GAGCGGCCGTCTGTTTCA 60.357 61.111 28.70 0.00 0.00 2.69
124 125 3.119096 GGAGCGGCCGTCTGTTTC 61.119 66.667 28.70 14.11 0.00 2.78
125 126 2.951475 TTTGGAGCGGCCGTCTGTTT 62.951 55.000 28.70 5.54 40.66 2.83
126 127 2.951475 TTTTGGAGCGGCCGTCTGTT 62.951 55.000 28.70 7.51 40.66 3.16
127 128 2.951475 TTTTTGGAGCGGCCGTCTGT 62.951 55.000 28.70 9.26 40.66 3.41
128 129 2.258013 TTTTTGGAGCGGCCGTCTG 61.258 57.895 28.70 0.00 40.66 3.51
129 130 2.112297 TTTTTGGAGCGGCCGTCT 59.888 55.556 28.70 23.74 40.66 4.18
146 147 4.142469 CCACTCGGTCTGTTTCAAGTTTTT 60.142 41.667 0.00 0.00 0.00 1.94
147 148 3.377172 CCACTCGGTCTGTTTCAAGTTTT 59.623 43.478 0.00 0.00 0.00 2.43
148 149 2.943033 CCACTCGGTCTGTTTCAAGTTT 59.057 45.455 0.00 0.00 0.00 2.66
149 150 2.561569 CCACTCGGTCTGTTTCAAGTT 58.438 47.619 0.00 0.00 0.00 2.66
150 151 1.810412 GCCACTCGGTCTGTTTCAAGT 60.810 52.381 0.00 0.00 33.28 3.16
151 152 0.868406 GCCACTCGGTCTGTTTCAAG 59.132 55.000 0.00 0.00 33.28 3.02
152 153 0.468226 AGCCACTCGGTCTGTTTCAA 59.532 50.000 0.00 0.00 33.28 2.69
153 154 0.249868 CAGCCACTCGGTCTGTTTCA 60.250 55.000 0.00 0.00 33.95 2.69
154 155 0.033504 TCAGCCACTCGGTCTGTTTC 59.966 55.000 0.00 0.00 37.56 2.78
155 156 0.468226 TTCAGCCACTCGGTCTGTTT 59.532 50.000 0.00 0.00 37.56 2.83
156 157 0.468226 TTTCAGCCACTCGGTCTGTT 59.532 50.000 0.00 0.00 37.56 3.16
157 158 0.468226 TTTTCAGCCACTCGGTCTGT 59.532 50.000 0.00 0.00 37.56 3.41
158 159 1.264288 GTTTTTCAGCCACTCGGTCTG 59.736 52.381 0.00 0.00 37.62 3.51
159 160 1.594331 GTTTTTCAGCCACTCGGTCT 58.406 50.000 0.00 0.00 33.28 3.85
160 161 0.234884 CGTTTTTCAGCCACTCGGTC 59.765 55.000 0.00 0.00 33.28 4.79
161 162 0.179067 TCGTTTTTCAGCCACTCGGT 60.179 50.000 0.00 0.00 33.28 4.69
162 163 0.941542 TTCGTTTTTCAGCCACTCGG 59.058 50.000 0.00 0.00 0.00 4.63
163 164 2.286833 TCTTTCGTTTTTCAGCCACTCG 59.713 45.455 0.00 0.00 0.00 4.18
164 165 3.963383 TCTTTCGTTTTTCAGCCACTC 57.037 42.857 0.00 0.00 0.00 3.51
165 166 4.712122 TTTCTTTCGTTTTTCAGCCACT 57.288 36.364 0.00 0.00 0.00 4.00
166 167 5.119434 TGTTTTTCTTTCGTTTTTCAGCCAC 59.881 36.000 0.00 0.00 0.00 5.01
167 168 5.119434 GTGTTTTTCTTTCGTTTTTCAGCCA 59.881 36.000 0.00 0.00 0.00 4.75
168 169 5.547341 GTGTTTTTCTTTCGTTTTTCAGCC 58.453 37.500 0.00 0.00 0.00 4.85
169 170 5.237705 CGTGTTTTTCTTTCGTTTTTCAGC 58.762 37.500 0.00 0.00 0.00 4.26
170 171 5.569823 TCCGTGTTTTTCTTTCGTTTTTCAG 59.430 36.000 0.00 0.00 0.00 3.02
171 172 5.342791 GTCCGTGTTTTTCTTTCGTTTTTCA 59.657 36.000 0.00 0.00 0.00 2.69
172 173 5.220080 GGTCCGTGTTTTTCTTTCGTTTTTC 60.220 40.000 0.00 0.00 0.00 2.29
173 174 4.622313 GGTCCGTGTTTTTCTTTCGTTTTT 59.378 37.500 0.00 0.00 0.00 1.94
174 175 4.082625 AGGTCCGTGTTTTTCTTTCGTTTT 60.083 37.500 0.00 0.00 0.00 2.43
175 176 3.441222 AGGTCCGTGTTTTTCTTTCGTTT 59.559 39.130 0.00 0.00 0.00 3.60
176 177 3.011818 AGGTCCGTGTTTTTCTTTCGTT 58.988 40.909 0.00 0.00 0.00 3.85
177 178 2.635714 AGGTCCGTGTTTTTCTTTCGT 58.364 42.857 0.00 0.00 0.00 3.85
178 179 4.689345 AGATAGGTCCGTGTTTTTCTTTCG 59.311 41.667 0.00 0.00 0.00 3.46
179 180 6.348295 GGAAGATAGGTCCGTGTTTTTCTTTC 60.348 42.308 0.00 0.00 0.00 2.62
180 181 5.472478 GGAAGATAGGTCCGTGTTTTTCTTT 59.528 40.000 0.00 0.00 0.00 2.52
181 182 5.001874 GGAAGATAGGTCCGTGTTTTTCTT 58.998 41.667 0.00 0.00 0.00 2.52
182 183 4.286291 AGGAAGATAGGTCCGTGTTTTTCT 59.714 41.667 0.00 0.00 40.36 2.52
183 184 4.576879 AGGAAGATAGGTCCGTGTTTTTC 58.423 43.478 0.00 0.00 40.36 2.29
184 185 4.576879 GAGGAAGATAGGTCCGTGTTTTT 58.423 43.478 0.00 0.00 40.36 1.94
185 186 3.368116 CGAGGAAGATAGGTCCGTGTTTT 60.368 47.826 0.00 0.00 40.36 2.43
186 187 2.165845 CGAGGAAGATAGGTCCGTGTTT 59.834 50.000 0.00 0.00 40.36 2.83
187 188 1.749634 CGAGGAAGATAGGTCCGTGTT 59.250 52.381 0.00 0.00 40.36 3.32
188 189 1.390565 CGAGGAAGATAGGTCCGTGT 58.609 55.000 0.00 0.00 40.36 4.49
189 190 0.669077 CCGAGGAAGATAGGTCCGTG 59.331 60.000 0.00 0.00 40.36 4.94
190 191 0.258194 ACCGAGGAAGATAGGTCCGT 59.742 55.000 0.00 0.00 40.36 4.69
191 192 2.267174 TACCGAGGAAGATAGGTCCG 57.733 55.000 0.00 0.00 40.36 4.79
326 350 3.866582 GGAGGGACGCTGGATGGG 61.867 72.222 0.00 0.00 0.00 4.00
327 351 3.866582 GGGAGGGACGCTGGATGG 61.867 72.222 0.00 0.00 0.00 3.51
328 352 3.866582 GGGGAGGGACGCTGGATG 61.867 72.222 0.00 0.00 0.00 3.51
340 364 1.690985 GGGGAAGAGAGTGGGGGAG 60.691 68.421 0.00 0.00 0.00 4.30
595 653 3.493303 GATGGGGAGGGTGGAGGC 61.493 72.222 0.00 0.00 0.00 4.70
598 656 2.372688 GGAGATGGGGAGGGTGGA 59.627 66.667 0.00 0.00 0.00 4.02
600 658 2.774351 GGGGAGATGGGGAGGGTG 60.774 72.222 0.00 0.00 0.00 4.61
601 659 2.644628 GATGGGGAGATGGGGAGGGT 62.645 65.000 0.00 0.00 0.00 4.34
605 671 1.240129 GGAGATGGGGAGATGGGGA 59.760 63.158 0.00 0.00 0.00 4.81
608 674 0.683973 CGAAGGAGATGGGGAGATGG 59.316 60.000 0.00 0.00 0.00 3.51
610 676 3.551635 ATACGAAGGAGATGGGGAGAT 57.448 47.619 0.00 0.00 0.00 2.75
613 679 3.838317 CCATAATACGAAGGAGATGGGGA 59.162 47.826 0.00 0.00 31.95 4.81
614 680 3.055094 CCCATAATACGAAGGAGATGGGG 60.055 52.174 9.49 0.00 46.63 4.96
615 681 4.207891 CCCATAATACGAAGGAGATGGG 57.792 50.000 3.45 3.45 45.63 4.00
621 687 5.540400 ACGAAATCCCATAATACGAAGGA 57.460 39.130 0.00 0.00 0.00 3.36
625 691 4.797471 CCGTACGAAATCCCATAATACGA 58.203 43.478 18.76 0.00 36.85 3.43
631 697 2.228138 GTGCCGTACGAAATCCCATA 57.772 50.000 18.76 0.00 0.00 2.74
632 698 3.074594 GTGCCGTACGAAATCCCAT 57.925 52.632 18.76 0.00 0.00 4.00
633 699 4.602159 GTGCCGTACGAAATCCCA 57.398 55.556 18.76 0.90 0.00 4.37
652 733 1.253593 TGAGTCAGATGGTGAGCGCT 61.254 55.000 11.27 11.27 35.13 5.92
669 750 3.276091 CTGCACGCACGGGTTTGA 61.276 61.111 0.00 0.00 0.00 2.69
670 751 4.326766 CCTGCACGCACGGGTTTG 62.327 66.667 0.00 0.00 0.00 2.93
799 901 2.128274 CAACGAAACGTGTCGCCG 60.128 61.111 27.44 14.99 45.00 6.46
805 907 1.062002 ACAACAGAGCAACGAAACGTG 59.938 47.619 0.00 0.00 39.99 4.49
843 949 1.224069 TGCAGCACGAGAGCTTTCAC 61.224 55.000 4.97 0.00 43.70 3.18
845 951 1.633852 CCTGCAGCACGAGAGCTTTC 61.634 60.000 8.66 0.00 43.70 2.62
850 956 1.153862 GAGACCTGCAGCACGAGAG 60.154 63.158 8.66 0.00 0.00 3.20
853 959 2.982744 CTCGAGACCTGCAGCACGA 61.983 63.158 6.58 14.11 0.00 4.35
865 992 4.456253 GCGAACGACGGCTCGAGA 62.456 66.667 18.75 0.00 43.06 4.04
920 1047 0.667487 CGCACACAGACCTTGTCGAT 60.667 55.000 0.00 0.00 38.16 3.59
941 1068 0.095245 CAAACATGTAGCAGCGGTCG 59.905 55.000 0.00 0.00 0.00 4.79
942 1069 1.156736 ACAAACATGTAGCAGCGGTC 58.843 50.000 0.00 0.00 0.00 4.79
943 1070 1.604604 AACAAACATGTAGCAGCGGT 58.395 45.000 0.00 0.00 0.00 5.68
944 1071 2.287547 ACAAACAAACATGTAGCAGCGG 60.288 45.455 0.00 0.00 0.00 5.52
966 1108 8.454106 AGAGCATCATCAAGTATAACAAACAAC 58.546 33.333 0.00 0.00 37.82 3.32
968 1110 7.607607 ACAGAGCATCATCAAGTATAACAAACA 59.392 33.333 0.00 0.00 37.82 2.83
969 1111 7.978982 ACAGAGCATCATCAAGTATAACAAAC 58.021 34.615 0.00 0.00 37.82 2.93
975 1117 5.922053 AGCAACAGAGCATCATCAAGTATA 58.078 37.500 0.00 0.00 37.82 1.47
976 1118 4.778579 AGCAACAGAGCATCATCAAGTAT 58.221 39.130 0.00 0.00 37.82 2.12
992 1140 0.035152 AGATTCGGCCATGAGCAACA 60.035 50.000 2.24 0.00 46.50 3.33
1023 1171 1.001764 CATCCCCTGCAACAGAGCA 60.002 57.895 0.00 0.00 43.35 4.26
1024 1172 3.915575 CATCCCCTGCAACAGAGC 58.084 61.111 0.00 0.00 32.44 4.09
1068 1216 1.208293 CTGTTGTAGGGCTTCCTCTCC 59.792 57.143 0.00 0.00 41.96 3.71
1085 1233 1.129917 CAGAGATCTGGATGCCCTGT 58.870 55.000 0.00 0.00 40.20 4.00
1092 1240 3.317455 ACAGAGAGCAGAGATCTGGAT 57.683 47.619 11.63 0.00 43.81 3.41
1099 1247 3.206964 CCATACGTACAGAGAGCAGAGA 58.793 50.000 0.00 0.00 0.00 3.10
1124 1272 4.752101 ACAGTTCAGAGAAAAACGAGATGG 59.248 41.667 0.00 0.00 0.00 3.51
1128 1276 5.277058 CCTTGACAGTTCAGAGAAAAACGAG 60.277 44.000 0.00 0.00 31.71 4.18
1144 1292 1.997874 CCCCCTCTCCCCTTGACAG 60.998 68.421 0.00 0.00 0.00 3.51
1168 1323 0.555369 TTAATTACCCCCAGGCCCCA 60.555 55.000 0.00 0.00 36.11 4.96
1194 1349 8.076178 CCTTGTTTCTGTAACTTGAAAATCGAT 58.924 33.333 0.00 0.00 37.64 3.59
1227 1391 2.671396 CGTAGTGCAATTACTCACCCAC 59.329 50.000 0.00 0.00 33.90 4.61
1246 1411 0.542232 AAGTCTAGCACCCACTCCGT 60.542 55.000 0.00 0.00 0.00 4.69
1270 1435 4.686191 AATTTGTTGCACAGGAATGGAA 57.314 36.364 0.00 0.00 0.00 3.53
1336 1514 3.932089 ACAACAAATTTTGCCACAGTCAC 59.068 39.130 9.04 0.00 0.00 3.67
1344 1522 3.530535 AGTGTGGACAACAAATTTTGCC 58.469 40.909 9.04 3.22 41.57 4.52
1347 1525 8.237811 AGAGAATAGTGTGGACAACAAATTTT 57.762 30.769 0.00 0.00 41.57 1.82
1358 1536 3.578282 TCAGCACAAGAGAATAGTGTGGA 59.422 43.478 5.29 0.00 42.34 4.02
1443 1621 8.688747 AAAAGAAATAAAATGTGCAATCCCAA 57.311 26.923 0.00 0.00 0.00 4.12
1557 1761 1.480137 GACCATCTGGAGTCAGGACAG 59.520 57.143 2.55 0.00 41.23 3.51
1692 1899 4.396790 CCATTTTGGAATTTGCAAGGGATG 59.603 41.667 0.00 9.14 40.96 3.51
1904 2117 6.492007 AGATCATTGACAACACATTCAGTC 57.508 37.500 0.00 0.00 0.00 3.51
1979 2192 3.140325 TGCCTTTCCAGGTTTACAGAG 57.860 47.619 0.00 0.00 43.18 3.35
2118 2332 1.001633 AGCTTTTCAAGGCATGGCTTG 59.998 47.619 41.51 41.51 0.00 4.01
2139 2353 5.246307 GGTACCTTCTTAACAGAGTTGCAT 58.754 41.667 4.06 0.00 0.00 3.96
2215 2429 2.042104 GCACAAGCTAAGTTGCAGTG 57.958 50.000 13.35 13.35 41.12 3.66
2263 2477 7.201884 CGTCTTCCCTTATGTAGACCTAAATCA 60.202 40.741 0.00 0.00 34.86 2.57
2360 2574 0.536006 GCTGCACCTTCACAGGAGTT 60.536 55.000 0.00 0.00 44.19 3.01
2380 2594 5.682659 AGAGCTGAATTCTCAATGCATACT 58.317 37.500 0.00 0.00 33.15 2.12
2381 2595 6.927936 TCTAGAGCTGAATTCTCAATGCATAC 59.072 38.462 0.00 1.23 33.15 2.39
2382 2596 7.059202 TCTAGAGCTGAATTCTCAATGCATA 57.941 36.000 0.00 0.00 33.15 3.14
2383 2597 5.926663 TCTAGAGCTGAATTCTCAATGCAT 58.073 37.500 7.05 0.00 33.15 3.96
2384 2598 5.349061 TCTAGAGCTGAATTCTCAATGCA 57.651 39.130 7.05 0.00 33.15 3.96
2385 2599 5.816777 ACTTCTAGAGCTGAATTCTCAATGC 59.183 40.000 7.05 3.84 33.15 3.56
2386 2600 6.817641 ACACTTCTAGAGCTGAATTCTCAATG 59.182 38.462 7.05 0.00 33.15 2.82
2387 2601 6.945218 ACACTTCTAGAGCTGAATTCTCAAT 58.055 36.000 7.05 0.00 33.15 2.57
2388 2602 6.352016 ACACTTCTAGAGCTGAATTCTCAA 57.648 37.500 7.05 0.00 33.15 3.02
2389 2603 5.991933 ACACTTCTAGAGCTGAATTCTCA 57.008 39.130 7.05 0.00 33.15 3.27
2390 2604 5.063312 GCAACACTTCTAGAGCTGAATTCTC 59.937 44.000 7.05 0.00 0.00 2.87
2391 2605 4.934602 GCAACACTTCTAGAGCTGAATTCT 59.065 41.667 7.05 0.00 0.00 2.40
2392 2606 4.094146 GGCAACACTTCTAGAGCTGAATTC 59.906 45.833 0.00 0.00 0.00 2.17
2393 2607 4.006319 GGCAACACTTCTAGAGCTGAATT 58.994 43.478 0.00 0.00 0.00 2.17
2394 2608 3.008375 TGGCAACACTTCTAGAGCTGAAT 59.992 43.478 0.00 0.00 46.17 2.57
2395 2609 2.368548 TGGCAACACTTCTAGAGCTGAA 59.631 45.455 0.00 0.00 46.17 3.02
2396 2610 1.970640 TGGCAACACTTCTAGAGCTGA 59.029 47.619 0.00 0.00 46.17 4.26
2397 2611 2.462456 TGGCAACACTTCTAGAGCTG 57.538 50.000 0.00 0.00 46.17 4.24
2410 2624 1.398390 CTCAGTATTCCGCTTGGCAAC 59.602 52.381 0.00 0.00 0.00 4.17
2411 2625 1.737838 CTCAGTATTCCGCTTGGCAA 58.262 50.000 0.00 0.00 0.00 4.52
2412 2626 0.744414 GCTCAGTATTCCGCTTGGCA 60.744 55.000 0.00 0.00 0.00 4.92
2413 2627 0.462759 AGCTCAGTATTCCGCTTGGC 60.463 55.000 0.00 0.00 0.00 4.52
2414 2628 1.293924 CAGCTCAGTATTCCGCTTGG 58.706 55.000 0.00 0.00 0.00 3.61
2415 2629 0.654683 GCAGCTCAGTATTCCGCTTG 59.345 55.000 0.00 0.00 0.00 4.01
2416 2630 0.539051 AGCAGCTCAGTATTCCGCTT 59.461 50.000 0.00 0.00 0.00 4.68
2417 2631 0.103937 GAGCAGCTCAGTATTCCGCT 59.896 55.000 18.17 0.00 0.00 5.52
2418 2632 1.211818 CGAGCAGCTCAGTATTCCGC 61.212 60.000 22.49 0.00 0.00 5.54
2419 2633 1.211818 GCGAGCAGCTCAGTATTCCG 61.212 60.000 22.49 7.34 44.04 4.30
2420 2634 2.599216 GCGAGCAGCTCAGTATTCC 58.401 57.895 22.49 0.00 44.04 3.01
2425 2639 3.309506 ACTGGCGAGCAGCTCAGT 61.310 61.111 22.49 15.41 45.74 3.41
2431 2645 0.445436 GACAATTCACTGGCGAGCAG 59.555 55.000 0.00 0.00 0.00 4.24
2432 2646 0.955428 GGACAATTCACTGGCGAGCA 60.955 55.000 0.00 0.00 0.00 4.26
2433 2647 0.955428 TGGACAATTCACTGGCGAGC 60.955 55.000 0.00 0.00 0.00 5.03
2434 2648 1.667724 GATGGACAATTCACTGGCGAG 59.332 52.381 0.00 0.00 0.00 5.03
2435 2649 1.003003 TGATGGACAATTCACTGGCGA 59.997 47.619 0.00 0.00 0.00 5.54
2436 2650 1.131126 GTGATGGACAATTCACTGGCG 59.869 52.381 0.00 0.00 39.30 5.69
2437 2651 1.474077 GGTGATGGACAATTCACTGGC 59.526 52.381 6.15 0.00 41.55 4.85
2438 2652 3.012518 GAGGTGATGGACAATTCACTGG 58.987 50.000 6.15 0.00 41.55 4.00
2439 2653 3.012518 GGAGGTGATGGACAATTCACTG 58.987 50.000 6.15 0.00 41.55 3.66
2440 2654 2.025887 GGGAGGTGATGGACAATTCACT 60.026 50.000 6.15 0.00 41.55 3.41
2441 2655 2.369394 GGGAGGTGATGGACAATTCAC 58.631 52.381 0.00 0.00 41.19 3.18
2442 2656 1.284785 GGGGAGGTGATGGACAATTCA 59.715 52.381 0.00 0.00 0.00 2.57
2443 2657 1.284785 TGGGGAGGTGATGGACAATTC 59.715 52.381 0.00 0.00 0.00 2.17
2444 2658 1.381867 TGGGGAGGTGATGGACAATT 58.618 50.000 0.00 0.00 0.00 2.32
2445 2659 1.285962 CTTGGGGAGGTGATGGACAAT 59.714 52.381 0.00 0.00 0.00 2.71
2446 2660 0.698238 CTTGGGGAGGTGATGGACAA 59.302 55.000 0.00 0.00 0.00 3.18
2447 2661 0.475632 ACTTGGGGAGGTGATGGACA 60.476 55.000 0.00 0.00 0.00 4.02
2448 2662 0.698818 AACTTGGGGAGGTGATGGAC 59.301 55.000 0.00 0.00 0.00 4.02
2449 2663 2.307686 GTTAACTTGGGGAGGTGATGGA 59.692 50.000 0.00 0.00 0.00 3.41
2450 2664 2.041081 TGTTAACTTGGGGAGGTGATGG 59.959 50.000 7.22 0.00 0.00 3.51
2451 2665 3.081804 GTGTTAACTTGGGGAGGTGATG 58.918 50.000 7.22 0.00 0.00 3.07
2452 2666 2.714250 TGTGTTAACTTGGGGAGGTGAT 59.286 45.455 7.22 0.00 0.00 3.06
2453 2667 2.105821 CTGTGTTAACTTGGGGAGGTGA 59.894 50.000 7.22 0.00 0.00 4.02
2454 2668 2.504367 CTGTGTTAACTTGGGGAGGTG 58.496 52.381 7.22 0.00 0.00 4.00
2455 2669 1.202891 GCTGTGTTAACTTGGGGAGGT 60.203 52.381 7.22 0.00 0.00 3.85
2456 2670 1.202879 TGCTGTGTTAACTTGGGGAGG 60.203 52.381 7.22 0.00 0.00 4.30
2457 2671 2.154462 CTGCTGTGTTAACTTGGGGAG 58.846 52.381 7.22 2.04 0.00 4.30
2458 2672 1.493022 ACTGCTGTGTTAACTTGGGGA 59.507 47.619 7.22 0.00 0.00 4.81
2459 2673 1.981256 ACTGCTGTGTTAACTTGGGG 58.019 50.000 7.22 0.00 0.00 4.96
2460 2674 3.119849 GCATACTGCTGTGTTAACTTGGG 60.120 47.826 7.22 0.00 40.96 4.12
2461 2675 3.501828 TGCATACTGCTGTGTTAACTTGG 59.498 43.478 7.22 0.00 45.31 3.61
2462 2676 4.747540 TGCATACTGCTGTGTTAACTTG 57.252 40.909 7.22 0.00 45.31 3.16
2463 2677 5.473162 TCAATGCATACTGCTGTGTTAACTT 59.527 36.000 0.00 0.00 45.31 2.66
2464 2678 5.003160 TCAATGCATACTGCTGTGTTAACT 58.997 37.500 0.00 0.00 45.31 2.24
2465 2679 5.122239 TCTCAATGCATACTGCTGTGTTAAC 59.878 40.000 0.00 0.00 45.31 2.01
2466 2680 5.244755 TCTCAATGCATACTGCTGTGTTAA 58.755 37.500 0.00 0.00 45.31 2.01
2467 2681 4.831107 TCTCAATGCATACTGCTGTGTTA 58.169 39.130 0.00 0.00 45.31 2.41
2468 2682 3.678289 TCTCAATGCATACTGCTGTGTT 58.322 40.909 0.00 0.00 45.31 3.32
2469 2683 3.339253 TCTCAATGCATACTGCTGTGT 57.661 42.857 0.00 0.00 45.31 3.72
2470 2684 4.895224 ATTCTCAATGCATACTGCTGTG 57.105 40.909 0.00 0.00 45.31 3.66
2471 2685 4.945543 TGAATTCTCAATGCATACTGCTGT 59.054 37.500 0.00 0.66 45.31 4.40
2472 2686 5.494632 TGAATTCTCAATGCATACTGCTG 57.505 39.130 0.00 0.00 45.31 4.41
2473 2687 4.036498 GCTGAATTCTCAATGCATACTGCT 59.964 41.667 0.00 0.00 45.31 4.24
2474 2688 4.036498 AGCTGAATTCTCAATGCATACTGC 59.964 41.667 0.00 1.12 45.29 4.40
2475 2689 5.527951 AGAGCTGAATTCTCAATGCATACTG 59.472 40.000 0.00 0.00 33.15 2.74
2476 2690 5.682659 AGAGCTGAATTCTCAATGCATACT 58.317 37.500 0.00 0.00 33.15 2.12
2477 2691 6.927936 TCTAGAGCTGAATTCTCAATGCATAC 59.072 38.462 0.00 1.23 33.15 2.39
2478 2692 7.059202 TCTAGAGCTGAATTCTCAATGCATA 57.941 36.000 0.00 0.00 33.15 3.14
2479 2693 5.926663 TCTAGAGCTGAATTCTCAATGCAT 58.073 37.500 7.05 0.00 33.15 3.96
2480 2694 5.349061 TCTAGAGCTGAATTCTCAATGCA 57.651 39.130 7.05 0.00 33.15 3.96
2481 2695 5.816777 ACTTCTAGAGCTGAATTCTCAATGC 59.183 40.000 7.05 3.84 33.15 3.56
2482 2696 7.267128 AGACTTCTAGAGCTGAATTCTCAATG 58.733 38.462 7.05 0.00 30.92 2.82
2483 2697 7.422465 AGACTTCTAGAGCTGAATTCTCAAT 57.578 36.000 7.05 0.00 30.92 2.57
2484 2698 6.849085 AGACTTCTAGAGCTGAATTCTCAA 57.151 37.500 7.05 0.00 30.92 3.02
2485 2699 6.127479 GGAAGACTTCTAGAGCTGAATTCTCA 60.127 42.308 14.72 0.00 34.04 3.27
2486 2700 6.273071 GGAAGACTTCTAGAGCTGAATTCTC 58.727 44.000 14.72 0.00 34.04 2.87
2487 2701 5.128663 GGGAAGACTTCTAGAGCTGAATTCT 59.871 44.000 14.72 0.00 35.78 2.40
2488 2702 5.105146 TGGGAAGACTTCTAGAGCTGAATTC 60.105 44.000 14.72 0.00 0.00 2.17
2489 2703 4.780021 TGGGAAGACTTCTAGAGCTGAATT 59.220 41.667 14.72 0.00 0.00 2.17
2490 2704 4.357325 TGGGAAGACTTCTAGAGCTGAAT 58.643 43.478 14.72 0.00 0.00 2.57
2491 2705 3.779444 TGGGAAGACTTCTAGAGCTGAA 58.221 45.455 14.72 0.00 0.00 3.02
2492 2706 3.458044 TGGGAAGACTTCTAGAGCTGA 57.542 47.619 14.72 0.00 0.00 4.26
2493 2707 3.678529 GCTTGGGAAGACTTCTAGAGCTG 60.679 52.174 14.72 1.62 0.00 4.24
2494 2708 2.499693 GCTTGGGAAGACTTCTAGAGCT 59.500 50.000 14.72 0.00 0.00 4.09
2495 2709 2.737039 CGCTTGGGAAGACTTCTAGAGC 60.737 54.545 14.72 17.18 0.00 4.09
2496 2710 2.159170 CCGCTTGGGAAGACTTCTAGAG 60.159 54.545 14.72 10.83 38.47 2.43
2497 2711 1.825474 CCGCTTGGGAAGACTTCTAGA 59.175 52.381 14.72 0.00 38.47 2.43
2498 2712 1.825474 TCCGCTTGGGAAGACTTCTAG 59.175 52.381 14.72 10.58 43.62 2.43
2499 2713 1.933021 TCCGCTTGGGAAGACTTCTA 58.067 50.000 14.72 2.27 43.62 2.10
2500 2714 2.759985 TCCGCTTGGGAAGACTTCT 58.240 52.632 14.72 0.00 43.62 2.85
2508 2722 0.178068 GCTCAGTATTCCGCTTGGGA 59.822 55.000 0.00 0.00 45.40 4.37
2509 2723 0.179000 AGCTCAGTATTCCGCTTGGG 59.821 55.000 0.00 0.00 37.02 4.12
2510 2724 1.293924 CAGCTCAGTATTCCGCTTGG 58.706 55.000 0.00 0.00 0.00 3.61
2511 2725 0.654683 GCAGCTCAGTATTCCGCTTG 59.345 55.000 0.00 0.00 0.00 4.01
2512 2726 0.539051 AGCAGCTCAGTATTCCGCTT 59.461 50.000 0.00 0.00 0.00 4.68
2513 2727 0.103937 GAGCAGCTCAGTATTCCGCT 59.896 55.000 18.17 0.00 0.00 5.52
2514 2728 1.211818 CGAGCAGCTCAGTATTCCGC 61.212 60.000 22.49 0.00 0.00 5.54
2515 2729 1.211818 GCGAGCAGCTCAGTATTCCG 61.212 60.000 22.49 7.34 44.04 4.30
2516 2730 2.599216 GCGAGCAGCTCAGTATTCC 58.401 57.895 22.49 0.00 44.04 3.01
2521 2735 3.309506 ACTGGCGAGCAGCTCAGT 61.310 61.111 22.49 15.41 45.74 3.41
2527 2741 0.445436 GACAATTCACTGGCGAGCAG 59.555 55.000 0.00 0.00 0.00 4.24
2528 2742 0.955428 GGACAATTCACTGGCGAGCA 60.955 55.000 0.00 0.00 0.00 4.26
2529 2743 0.955428 TGGACAATTCACTGGCGAGC 60.955 55.000 0.00 0.00 0.00 5.03
2530 2744 1.667724 GATGGACAATTCACTGGCGAG 59.332 52.381 0.00 0.00 0.00 5.03
2531 2745 1.003003 TGATGGACAATTCACTGGCGA 59.997 47.619 0.00 0.00 0.00 5.54
2532 2746 1.131126 GTGATGGACAATTCACTGGCG 59.869 52.381 0.00 0.00 39.30 5.69
2533 2747 1.474077 GGTGATGGACAATTCACTGGC 59.526 52.381 6.15 0.00 41.55 4.85
2534 2748 3.012518 GAGGTGATGGACAATTCACTGG 58.987 50.000 6.15 0.00 41.55 4.00
2535 2749 3.012518 GGAGGTGATGGACAATTCACTG 58.987 50.000 6.15 0.00 41.55 3.66
2536 2750 2.025887 GGGAGGTGATGGACAATTCACT 60.026 50.000 6.15 0.00 41.55 3.41
2537 2751 2.369394 GGGAGGTGATGGACAATTCAC 58.631 52.381 0.00 0.00 41.19 3.18
2538 2752 1.284785 GGGGAGGTGATGGACAATTCA 59.715 52.381 0.00 0.00 0.00 2.57
2539 2753 1.284785 TGGGGAGGTGATGGACAATTC 59.715 52.381 0.00 0.00 0.00 2.17
2540 2754 1.381867 TGGGGAGGTGATGGACAATT 58.618 50.000 0.00 0.00 0.00 2.32
2541 2755 1.285962 CTTGGGGAGGTGATGGACAAT 59.714 52.381 0.00 0.00 0.00 2.71
2542 2756 0.698238 CTTGGGGAGGTGATGGACAA 59.302 55.000 0.00 0.00 0.00 3.18
2543 2757 0.475632 ACTTGGGGAGGTGATGGACA 60.476 55.000 0.00 0.00 0.00 4.02
2544 2758 0.698818 AACTTGGGGAGGTGATGGAC 59.301 55.000 0.00 0.00 0.00 4.02
2545 2759 2.307686 GTTAACTTGGGGAGGTGATGGA 59.692 50.000 0.00 0.00 0.00 3.41
2546 2760 2.041081 TGTTAACTTGGGGAGGTGATGG 59.959 50.000 7.22 0.00 0.00 3.51
2547 2761 3.081804 GTGTTAACTTGGGGAGGTGATG 58.918 50.000 7.22 0.00 0.00 3.07
2548 2762 2.714250 TGTGTTAACTTGGGGAGGTGAT 59.286 45.455 7.22 0.00 0.00 3.06
2549 2763 2.105821 CTGTGTTAACTTGGGGAGGTGA 59.894 50.000 7.22 0.00 0.00 4.02
2550 2764 2.105821 TCTGTGTTAACTTGGGGAGGTG 59.894 50.000 7.22 0.00 0.00 4.00
2551 2765 2.414612 TCTGTGTTAACTTGGGGAGGT 58.585 47.619 7.22 0.00 0.00 3.85
2552 2766 3.181443 ACTTCTGTGTTAACTTGGGGAGG 60.181 47.826 7.22 2.13 0.00 4.30
2553 2767 4.086706 ACTTCTGTGTTAACTTGGGGAG 57.913 45.455 7.22 1.87 0.00 4.30
2554 2768 5.556915 CATACTTCTGTGTTAACTTGGGGA 58.443 41.667 7.22 0.00 0.00 4.81
2555 2769 4.156008 GCATACTTCTGTGTTAACTTGGGG 59.844 45.833 7.22 0.00 0.00 4.96
2556 2770 4.759693 TGCATACTTCTGTGTTAACTTGGG 59.240 41.667 7.22 0.00 0.00 4.12
2557 2771 5.940192 TGCATACTTCTGTGTTAACTTGG 57.060 39.130 7.22 0.00 0.00 3.61
2558 2772 7.584108 TCAATGCATACTTCTGTGTTAACTTG 58.416 34.615 0.00 0.00 0.00 3.16
2559 2773 7.661437 TCTCAATGCATACTTCTGTGTTAACTT 59.339 33.333 0.00 0.00 0.00 2.66
2560 2774 7.161404 TCTCAATGCATACTTCTGTGTTAACT 58.839 34.615 0.00 0.00 0.00 2.24
2561 2775 7.364522 TCTCAATGCATACTTCTGTGTTAAC 57.635 36.000 0.00 0.00 0.00 2.01
2562 2776 7.977789 TTCTCAATGCATACTTCTGTGTTAA 57.022 32.000 0.00 0.00 0.00 2.01
2563 2777 8.565896 AATTCTCAATGCATACTTCTGTGTTA 57.434 30.769 0.00 0.00 0.00 2.41
2564 2778 7.175467 TGAATTCTCAATGCATACTTCTGTGTT 59.825 33.333 0.00 0.00 0.00 3.32
2565 2779 6.656270 TGAATTCTCAATGCATACTTCTGTGT 59.344 34.615 0.00 0.00 0.00 3.72
2566 2780 7.080353 TGAATTCTCAATGCATACTTCTGTG 57.920 36.000 0.00 0.00 0.00 3.66
2567 2781 6.183360 GCTGAATTCTCAATGCATACTTCTGT 60.183 38.462 0.00 0.00 0.00 3.41
2568 2782 6.038382 AGCTGAATTCTCAATGCATACTTCTG 59.962 38.462 0.00 0.00 0.00 3.02
2569 2783 6.120905 AGCTGAATTCTCAATGCATACTTCT 58.879 36.000 0.00 0.00 0.00 2.85
2570 2784 6.260493 AGAGCTGAATTCTCAATGCATACTTC 59.740 38.462 0.00 0.00 33.15 3.01
2571 2785 6.120905 AGAGCTGAATTCTCAATGCATACTT 58.879 36.000 0.00 0.00 33.15 2.24
2731 2945 4.187694 GTTCCCTATCACAGAAAGCAGAG 58.812 47.826 0.00 0.00 0.00 3.35
2737 2951 4.518970 GCACTTTGTTCCCTATCACAGAAA 59.481 41.667 0.00 0.00 0.00 2.52
2749 2963 4.083271 GGAGTACTTGATGCACTTTGTTCC 60.083 45.833 0.00 0.00 0.00 3.62
2825 3042 5.624509 GCCCCTTTTTATGATCAACCTTCAC 60.625 44.000 0.00 0.00 0.00 3.18
2848 3065 2.704572 ACTGTCTCTGTTAGCAATGGC 58.295 47.619 0.00 0.00 41.61 4.40
2933 3150 2.666317 ACTTTGGGAACTCAACCTTGG 58.334 47.619 0.00 0.00 0.00 3.61
3199 3416 2.905415 TTTTGCCCATGGTCTGATCT 57.095 45.000 11.73 0.00 0.00 2.75
3224 3441 6.937392 AGGACTTCTGTTCCTGTAATCTTAC 58.063 40.000 0.00 0.00 31.75 2.34
3226 3443 6.441088 AAGGACTTCTGTTCCTGTAATCTT 57.559 37.500 0.00 0.00 33.55 2.40
3267 3484 1.699634 TGAAGGAAGGAAGTGGGTGAG 59.300 52.381 0.00 0.00 0.00 3.51
3291 3508 8.956426 GGAACTGTTCTAAACATGGATCATTTA 58.044 33.333 19.05 0.00 41.26 1.40
3377 3596 2.220653 TCCTTTCCTCTGCCAATTGG 57.779 50.000 20.81 20.81 38.53 3.16
3436 3655 6.892691 CAGACTGTTTCTGTTCAAGGAATAC 58.107 40.000 0.00 0.00 46.12 1.89
3716 3935 2.609491 GCCCGTTCCCTTCAAAATTGAC 60.609 50.000 0.00 0.00 36.83 3.18
3724 3943 0.536460 GTTTCTGCCCGTTCCCTTCA 60.536 55.000 0.00 0.00 0.00 3.02
3771 3990 4.384056 CTCTTTTGAGCTTCTGTCCTCAA 58.616 43.478 0.00 0.00 43.98 3.02
3910 4129 0.716591 ACCTCTGGGTGGTCAGGATA 59.283 55.000 0.00 0.00 45.43 2.59
3981 4209 5.183904 ACTTCAATAATTCTGGCACCAGTTC 59.816 40.000 16.12 0.00 43.96 3.01
4032 4282 0.536687 CCCATCTGGTGCATGCCTAG 60.537 60.000 16.68 13.59 0.00 3.02
4152 4402 0.690192 TGAAATGGTCTCTTCCCGCA 59.310 50.000 0.00 0.00 0.00 5.69
4181 4431 5.181009 TCGAGTATGTTTCGTTCTCCTAGA 58.819 41.667 0.00 0.00 39.05 2.43
4217 4467 6.680874 ATACTGTACACGGTGAAAAACAAA 57.319 33.333 16.29 5.34 36.70 2.83
4280 4530 5.695818 GTGGAACTAAGCGCAAAATAAGAA 58.304 37.500 11.47 0.00 0.00 2.52
4506 4756 2.362077 GAGGAGACAGAGATGAAGAGGC 59.638 54.545 0.00 0.00 0.00 4.70
4614 4867 5.458779 GGTTCAATTTCTTCACCGTCAAAAG 59.541 40.000 0.00 0.00 0.00 2.27
4622 4875 6.039829 AGACAGAAAGGTTCAATTTCTTCACC 59.960 38.462 0.00 0.00 42.86 4.02
4623 4876 7.032377 AGACAGAAAGGTTCAATTTCTTCAC 57.968 36.000 0.00 0.00 42.86 3.18
4750 5028 7.304735 CAGCAACTAGTTTAATATGCACAACA 58.695 34.615 15.38 0.00 36.30 3.33
4875 5158 2.223537 TGCATAGTGTGTAGCCATCG 57.776 50.000 0.00 0.00 0.00 3.84
4954 5237 3.927142 AGTGCTACTGAAAATGCGAGTAC 59.073 43.478 0.00 0.00 0.00 2.73
5027 5311 4.002906 TCGAGTAAGTGATGCAAAAGGT 57.997 40.909 0.00 0.00 0.00 3.50
5401 5691 2.666190 CGCATATGACTGCCCCCG 60.666 66.667 6.97 0.00 39.00 5.73
5477 5767 0.109597 CCTGTGCTGCGGAACATTTC 60.110 55.000 6.86 0.00 29.37 2.17
5639 6038 1.079888 CCTTGGCGCCCAACATTTC 60.080 57.895 26.77 0.00 38.75 2.17
5680 6079 1.981254 ACTTTTGTGTGCGCATATGC 58.019 45.000 15.91 18.08 37.78 3.14
5688 6087 2.292916 GCGCCGAACTTTTGTGTGC 61.293 57.895 0.00 0.00 0.00 4.57
5697 6096 4.394712 CTCCCTTGGCGCCGAACT 62.395 66.667 23.90 0.00 0.00 3.01
5728 6127 0.866427 GCATGAGCATCTGACATCCG 59.134 55.000 0.00 0.00 41.58 4.18
5747 6146 1.089920 CCCTTGACGCAGAGGATTTG 58.910 55.000 0.50 0.00 34.91 2.32
5748 6147 0.984230 TCCCTTGACGCAGAGGATTT 59.016 50.000 0.50 0.00 34.91 2.17
5753 6152 1.151668 CTGTTTCCCTTGACGCAGAG 58.848 55.000 0.00 0.00 0.00 3.35
5755 6154 1.593196 TTCTGTTTCCCTTGACGCAG 58.407 50.000 0.00 0.00 0.00 5.18
5756 6155 2.045561 TTTCTGTTTCCCTTGACGCA 57.954 45.000 0.00 0.00 0.00 5.24
5759 6158 3.005791 CCACCATTTCTGTTTCCCTTGAC 59.994 47.826 0.00 0.00 0.00 3.18
5773 6172 0.040058 TCATCTGGCAGCCACCATTT 59.960 50.000 11.22 0.00 39.54 2.32
5780 6179 2.201921 ATGATGATCATCTGGCAGCC 57.798 50.000 30.65 3.66 38.60 4.85
5784 6183 6.072618 CCTTTGAACTATGATGATCATCTGGC 60.073 42.308 30.65 18.19 38.26 4.85
5797 6196 3.947196 TGGTGCATAGCCTTTGAACTATG 59.053 43.478 5.80 5.80 45.59 2.23
5798 6197 4.235079 TGGTGCATAGCCTTTGAACTAT 57.765 40.909 0.00 0.00 0.00 2.12
5808 6207 1.825622 GCTCCCTTGGTGCATAGCC 60.826 63.158 0.00 0.00 41.27 3.93
6032 6434 3.414193 TCTCGCCGGACCCTCCTA 61.414 66.667 5.05 0.00 33.30 2.94
6052 6454 4.191544 CCCATACTTGTGGTCATAGTGTG 58.808 47.826 0.00 0.00 37.57 3.82
6069 6471 1.546099 CCATAGCTGCATGCACCCATA 60.546 52.381 18.46 7.54 45.94 2.74
6079 6481 2.273123 CCACTGGCCATAGCTGCA 59.727 61.111 5.51 0.00 39.73 4.41
6309 6717 2.688666 TGGTAGCTGCTGGGAGGG 60.689 66.667 13.43 0.00 0.00 4.30
6319 6727 3.706373 CGGGCACTGGTGGTAGCT 61.706 66.667 2.84 0.00 0.00 3.32
6371 6785 3.066291 ACGAAACCATGCCTGATAACA 57.934 42.857 0.00 0.00 0.00 2.41
6402 6816 3.791245 CTTTTAACCTGCACCAAAAGCA 58.209 40.909 0.00 0.00 40.19 3.91
6441 6859 5.001232 ACAAAGTATCCGCAAAGTATGTGT 58.999 37.500 0.00 0.00 37.87 3.72
6448 6866 4.398549 TCGAAACAAAGTATCCGCAAAG 57.601 40.909 0.00 0.00 0.00 2.77
6452 6870 4.092968 ACTTCATCGAAACAAAGTATCCGC 59.907 41.667 0.00 0.00 30.47 5.54
6523 6947 2.639839 ACCAGAGCATAGACAAACCACT 59.360 45.455 0.00 0.00 0.00 4.00
6571 6999 0.974010 CTACCCCTTGGTACTCCGCA 60.974 60.000 0.00 0.00 45.45 5.69
6575 7003 2.242882 TGTCCTACCCCTTGGTACTC 57.757 55.000 0.00 0.00 45.45 2.59
6592 7020 2.105477 CAGTAGCCCATCCTAAGCATGT 59.895 50.000 0.00 0.00 0.00 3.21
6684 7122 9.920946 ACAAAGTTTCCATAATCCATACTGTAT 57.079 29.630 0.00 0.00 0.00 2.29
6685 7123 9.747898 AACAAAGTTTCCATAATCCATACTGTA 57.252 29.630 0.00 0.00 0.00 2.74
6686 7124 8.650143 AACAAAGTTTCCATAATCCATACTGT 57.350 30.769 0.00 0.00 0.00 3.55
6687 7125 8.739039 TGAACAAAGTTTCCATAATCCATACTG 58.261 33.333 0.00 0.00 0.00 2.74
6688 7126 8.877864 TGAACAAAGTTTCCATAATCCATACT 57.122 30.769 0.00 0.00 0.00 2.12
6689 7127 8.190784 CCTGAACAAAGTTTCCATAATCCATAC 58.809 37.037 0.00 0.00 0.00 2.39
6690 7128 8.112822 TCCTGAACAAAGTTTCCATAATCCATA 58.887 33.333 0.00 0.00 0.00 2.74
6691 7129 6.953520 TCCTGAACAAAGTTTCCATAATCCAT 59.046 34.615 0.00 0.00 0.00 3.41
6692 7130 6.310941 TCCTGAACAAAGTTTCCATAATCCA 58.689 36.000 0.00 0.00 0.00 3.41
6693 7131 6.834168 TCCTGAACAAAGTTTCCATAATCC 57.166 37.500 0.00 0.00 0.00 3.01
6694 7132 7.761249 CCATTCCTGAACAAAGTTTCCATAATC 59.239 37.037 0.00 0.00 0.00 1.75
6695 7133 7.454380 TCCATTCCTGAACAAAGTTTCCATAAT 59.546 33.333 0.00 0.00 0.00 1.28
6696 7134 6.780031 TCCATTCCTGAACAAAGTTTCCATAA 59.220 34.615 0.00 0.00 0.00 1.90
6697 7135 6.310941 TCCATTCCTGAACAAAGTTTCCATA 58.689 36.000 0.00 0.00 0.00 2.74
6698 7136 5.147032 TCCATTCCTGAACAAAGTTTCCAT 58.853 37.500 0.00 0.00 0.00 3.41
6699 7137 4.541705 TCCATTCCTGAACAAAGTTTCCA 58.458 39.130 0.00 0.00 0.00 3.53
6700 7138 4.584743 ACTCCATTCCTGAACAAAGTTTCC 59.415 41.667 0.00 0.00 0.00 3.13
6701 7139 5.774498 ACTCCATTCCTGAACAAAGTTTC 57.226 39.130 0.00 0.00 0.00 2.78
6702 7140 5.893824 AGAACTCCATTCCTGAACAAAGTTT 59.106 36.000 0.00 0.00 38.16 2.66
6703 7141 5.449553 AGAACTCCATTCCTGAACAAAGTT 58.550 37.500 0.00 0.00 38.16 2.66
6704 7142 5.053978 AGAACTCCATTCCTGAACAAAGT 57.946 39.130 0.00 0.00 38.16 2.66
6705 7143 6.396829 AAAGAACTCCATTCCTGAACAAAG 57.603 37.500 0.00 0.00 38.16 2.77
6706 7144 5.301805 GGAAAGAACTCCATTCCTGAACAAA 59.698 40.000 0.00 0.00 39.60 2.83
6707 7145 4.827284 GGAAAGAACTCCATTCCTGAACAA 59.173 41.667 0.00 0.00 39.60 2.83
6708 7146 4.398319 GGAAAGAACTCCATTCCTGAACA 58.602 43.478 0.00 0.00 39.60 3.18
6709 7147 3.437049 CGGAAAGAACTCCATTCCTGAAC 59.563 47.826 9.14 0.00 40.37 3.18
6710 7148 3.072476 ACGGAAAGAACTCCATTCCTGAA 59.928 43.478 9.14 0.00 40.37 3.02
6711 7149 2.637872 ACGGAAAGAACTCCATTCCTGA 59.362 45.455 9.14 0.00 40.37 3.86
6712 7150 3.059352 ACGGAAAGAACTCCATTCCTG 57.941 47.619 9.14 6.39 40.37 3.86
6713 7151 3.072476 TGAACGGAAAGAACTCCATTCCT 59.928 43.478 9.14 0.00 36.96 3.36
6714 7152 3.408634 TGAACGGAAAGAACTCCATTCC 58.591 45.455 0.00 0.00 36.96 3.01
6715 7153 5.875359 AGTATGAACGGAAAGAACTCCATTC 59.125 40.000 0.00 0.00 38.02 2.67
6716 7154 5.805728 AGTATGAACGGAAAGAACTCCATT 58.194 37.500 0.00 0.00 34.91 3.16
6717 7155 5.422214 AGTATGAACGGAAAGAACTCCAT 57.578 39.130 0.00 0.00 34.91 3.41
6718 7156 4.884668 AGTATGAACGGAAAGAACTCCA 57.115 40.909 0.00 0.00 34.91 3.86
6719 7157 6.555812 AAAAGTATGAACGGAAAGAACTCC 57.444 37.500 0.00 0.00 0.00 3.85
6865 7304 1.000385 CACTTTGAAGCATTGCGGGAA 60.000 47.619 2.38 0.00 0.00 3.97
6910 7349 1.292541 GTTCCAGTGGGAGTCGTCC 59.707 63.158 9.92 0.00 46.01 4.79
6939 7378 2.300152 AGAGGAATGCACGAGTCTTTCA 59.700 45.455 0.00 0.00 0.00 2.69
6978 7417 3.631227 GCTTCCTTGATGCTGCTAATCTT 59.369 43.478 0.00 0.00 31.35 2.40
7233 7672 2.496899 AGAATTTGGACGGCAGACAT 57.503 45.000 0.00 0.00 0.00 3.06
7264 7703 1.159285 CAAGTTCTTCGCATGGCTGA 58.841 50.000 0.00 0.00 0.00 4.26
7442 7882 1.901085 CCTTTGGGAGAGGGTCTCG 59.099 63.158 0.00 0.00 44.28 4.04
7469 7909 3.300388 ACAGTTCAACACCTCTCTGAGA 58.700 45.455 7.24 7.24 0.00 3.27
7491 7931 2.450476 GTGGACATTCTTCAGGGCATT 58.550 47.619 0.00 0.00 0.00 3.56
7565 8005 7.331934 CCAAAATCTATGACTTGTCGAAGAAGA 59.668 37.037 11.45 0.84 39.69 2.87
7566 8006 7.413438 CCCAAAATCTATGACTTGTCGAAGAAG 60.413 40.741 8.30 4.30 39.69 2.85
7567 8007 6.371548 CCCAAAATCTATGACTTGTCGAAGAA 59.628 38.462 8.30 0.00 39.69 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.