Multiple sequence alignment - TraesCS3A01G015900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G015900 chr3A 100.000 3317 0 0 1 3317 10446084 10449400 0.000000e+00 6126.0
1 TraesCS3A01G015900 chr3A 88.579 2294 219 19 989 3275 10416127 10418384 0.000000e+00 2745.0
2 TraesCS3A01G015900 chr3A 78.591 369 63 9 2843 3196 10614032 10614399 2.570000e-56 230.0
3 TraesCS3A01G015900 chr3D 94.592 2330 106 6 989 3298 4648952 4651281 0.000000e+00 3587.0
4 TraesCS3A01G015900 chr3D 89.380 2307 234 7 998 3298 9764808 9762507 0.000000e+00 2892.0
5 TraesCS3A01G015900 chr3D 88.622 2294 218 26 987 3275 4810488 4812743 0.000000e+00 2750.0
6 TraesCS3A01G015900 chr3D 89.032 155 15 2 1 153 584473968 584474122 1.210000e-44 191.0
7 TraesCS3A01G015900 chr3D 90.278 72 6 1 263 334 4810445 4810515 3.520000e-15 93.5
8 TraesCS3A01G015900 chrUn 96.128 2118 77 2 1186 3298 348470638 348472755 0.000000e+00 3452.0
9 TraesCS3A01G015900 chrUn 95.442 2128 81 4 1186 3298 35604300 35602174 0.000000e+00 3378.0
10 TraesCS3A01G015900 chrUn 87.841 1760 205 8 989 2741 34594592 34596349 0.000000e+00 2056.0
11 TraesCS3A01G015900 chrUn 87.848 1761 199 11 989 2741 34667799 34669552 0.000000e+00 2052.0
12 TraesCS3A01G015900 chrUn 87.521 1763 208 9 989 2741 253531052 253532812 0.000000e+00 2026.0
13 TraesCS3A01G015900 chrUn 87.621 1753 207 7 997 2741 320896796 320895046 0.000000e+00 2026.0
14 TraesCS3A01G015900 chrUn 88.741 1652 158 13 1625 3275 36000589 36002213 0.000000e+00 1995.0
15 TraesCS3A01G015900 chrUn 91.718 483 32 4 204 683 367917649 367917172 0.000000e+00 664.0
16 TraesCS3A01G015900 chrUn 90.351 342 26 2 2957 3298 226971151 226970817 3.040000e-120 442.0
17 TraesCS3A01G015900 chrUn 90.351 342 26 2 2957 3298 250252325 250251991 3.040000e-120 442.0
18 TraesCS3A01G015900 chrUn 88.824 340 36 2 989 1326 354043090 354043429 1.840000e-112 416.0
19 TraesCS3A01G015900 chrUn 91.333 300 8 6 698 993 367917187 367916902 8.630000e-106 394.0
20 TraesCS3A01G015900 chrUn 83.226 155 24 1 1 153 244918312 244918466 1.240000e-29 141.0
21 TraesCS3A01G015900 chrUn 83.226 155 24 1 1 153 285314329 285314483 1.240000e-29 141.0
22 TraesCS3A01G015900 chrUn 83.226 155 24 1 1 153 295402189 295402035 1.240000e-29 141.0
23 TraesCS3A01G015900 chrUn 80.992 121 21 2 2843 2961 35284603 35284723 9.800000e-16 95.3
24 TraesCS3A01G015900 chr7A 97.386 153 4 0 1 153 669026232 669026384 9.130000e-66 261.0
25 TraesCS3A01G015900 chr5D 90.728 151 13 1 2 151 451979166 451979316 2.020000e-47 200.0
26 TraesCS3A01G015900 chr7B 87.421 159 19 1 1 159 639359402 639359559 7.310000e-42 182.0
27 TraesCS3A01G015900 chr6D 86.842 152 19 1 3 153 58487357 58487508 5.690000e-38 169.0
28 TraesCS3A01G015900 chr1A 85.535 159 20 2 1 157 495329175 495329332 2.650000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G015900 chr3A 10446084 10449400 3316 False 6126.00 6126 100.0000 1 3317 1 chr3A.!!$F2 3316
1 TraesCS3A01G015900 chr3A 10416127 10418384 2257 False 2745.00 2745 88.5790 989 3275 1 chr3A.!!$F1 2286
2 TraesCS3A01G015900 chr3D 4648952 4651281 2329 False 3587.00 3587 94.5920 989 3298 1 chr3D.!!$F1 2309
3 TraesCS3A01G015900 chr3D 9762507 9764808 2301 True 2892.00 2892 89.3800 998 3298 1 chr3D.!!$R1 2300
4 TraesCS3A01G015900 chr3D 4810445 4812743 2298 False 1421.75 2750 89.4500 263 3275 2 chr3D.!!$F3 3012
5 TraesCS3A01G015900 chrUn 348470638 348472755 2117 False 3452.00 3452 96.1280 1186 3298 1 chrUn.!!$F8 2112
6 TraesCS3A01G015900 chrUn 35602174 35604300 2126 True 3378.00 3378 95.4420 1186 3298 1 chrUn.!!$R1 2112
7 TraesCS3A01G015900 chrUn 34594592 34596349 1757 False 2056.00 2056 87.8410 989 2741 1 chrUn.!!$F1 1752
8 TraesCS3A01G015900 chrUn 34667799 34669552 1753 False 2052.00 2052 87.8480 989 2741 1 chrUn.!!$F2 1752
9 TraesCS3A01G015900 chrUn 253531052 253532812 1760 False 2026.00 2026 87.5210 989 2741 1 chrUn.!!$F6 1752
10 TraesCS3A01G015900 chrUn 320895046 320896796 1750 True 2026.00 2026 87.6210 997 2741 1 chrUn.!!$R5 1744
11 TraesCS3A01G015900 chrUn 36000589 36002213 1624 False 1995.00 1995 88.7410 1625 3275 1 chrUn.!!$F4 1650
12 TraesCS3A01G015900 chrUn 367916902 367917649 747 True 529.00 664 91.5255 204 993 2 chrUn.!!$R6 789

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
578 579 0.033504 CCGGTTCACTACAGTGCACT 59.966 55.0 15.25 15.25 45.25 4.40 F
646 647 0.035056 GCTAGCCCAGTTGGATGTGT 60.035 55.0 2.29 0.00 37.39 3.72 F
775 776 0.102481 CGGACTAGAACCCATCACCG 59.898 60.0 0.00 0.00 0.00 4.94 F
920 921 0.103026 CTACTAGCTGCGTGCCATCA 59.897 55.0 0.00 0.00 44.23 3.07 F
1593 1601 0.105964 TGTCCGTTCCACCAGAGTTG 59.894 55.0 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1398 1405 1.417890 GGATCCATGACCGAGTGGAAT 59.582 52.381 6.95 0.0 46.78 3.01 R
1593 1601 1.667724 CCGCTGAGATTGTTCATGTCC 59.332 52.381 0.00 0.0 0.00 4.02 R
1852 2172 2.682952 ATAACGTCTCTCGCATACCG 57.317 50.000 0.00 0.0 44.19 4.02 R
1946 2269 3.026707 TCTGGATAATCTGACACCGGA 57.973 47.619 9.46 0.0 34.23 5.14 R
3154 3525 4.082081 GCACATCAAACCAGGAAATCATCA 60.082 41.667 0.00 0.0 0.00 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.274095 AGCTTCAATAAGGAGGCTCAC 57.726 47.619 17.69 5.85 45.87 3.51
23 24 2.573462 AGCTTCAATAAGGAGGCTCACA 59.427 45.455 17.69 0.22 45.87 3.58
24 25 3.009473 AGCTTCAATAAGGAGGCTCACAA 59.991 43.478 17.69 0.23 45.87 3.33
25 26 3.950395 GCTTCAATAAGGAGGCTCACAAT 59.050 43.478 17.69 2.86 36.98 2.71
26 27 4.036144 GCTTCAATAAGGAGGCTCACAATC 59.964 45.833 17.69 0.00 36.98 2.67
27 28 5.435291 CTTCAATAAGGAGGCTCACAATCT 58.565 41.667 17.69 0.09 0.00 2.40
28 29 6.560003 TTCAATAAGGAGGCTCACAATCTA 57.440 37.500 17.69 0.00 0.00 1.98
29 30 6.166984 TCAATAAGGAGGCTCACAATCTAG 57.833 41.667 17.69 0.00 0.00 2.43
30 31 2.998316 AAGGAGGCTCACAATCTAGC 57.002 50.000 17.69 0.00 38.03 3.42
31 32 0.749649 AGGAGGCTCACAATCTAGCG 59.250 55.000 17.69 0.00 39.71 4.26
32 33 0.747255 GGAGGCTCACAATCTAGCGA 59.253 55.000 17.69 0.00 39.71 4.93
33 34 1.137086 GGAGGCTCACAATCTAGCGAA 59.863 52.381 17.69 0.00 39.71 4.70
34 35 2.468831 GAGGCTCACAATCTAGCGAAG 58.531 52.381 10.25 0.00 39.71 3.79
51 52 3.548587 CGAAGCATGCATTAAGATTCGG 58.451 45.455 21.98 8.59 35.63 4.30
52 53 3.607775 CGAAGCATGCATTAAGATTCGGG 60.608 47.826 21.98 2.37 35.63 5.14
53 54 1.610522 AGCATGCATTAAGATTCGGGC 59.389 47.619 21.98 0.00 0.00 6.13
54 55 1.336240 GCATGCATTAAGATTCGGGCC 60.336 52.381 14.21 0.00 0.00 5.80
55 56 2.233271 CATGCATTAAGATTCGGGCCT 58.767 47.619 0.84 0.00 0.00 5.19
56 57 1.679139 TGCATTAAGATTCGGGCCTG 58.321 50.000 4.71 4.71 0.00 4.85
57 58 0.954452 GCATTAAGATTCGGGCCTGG 59.046 55.000 12.87 0.00 0.00 4.45
58 59 1.609208 CATTAAGATTCGGGCCTGGG 58.391 55.000 12.87 0.00 0.00 4.45
59 60 0.178990 ATTAAGATTCGGGCCTGGGC 60.179 55.000 12.87 12.58 41.06 5.36
60 61 2.602746 TTAAGATTCGGGCCTGGGCG 62.603 60.000 12.87 9.74 43.06 6.13
67 68 3.792736 GGGCCTGGGCGTCATGTA 61.793 66.667 14.63 0.00 43.06 2.29
68 69 2.510906 GGCCTGGGCGTCATGTAT 59.489 61.111 3.84 0.00 43.06 2.29
69 70 1.893808 GGCCTGGGCGTCATGTATG 60.894 63.158 3.84 0.00 43.06 2.39
70 71 1.893808 GCCTGGGCGTCATGTATGG 60.894 63.158 0.00 0.00 0.00 2.74
71 72 1.893808 CCTGGGCGTCATGTATGGC 60.894 63.158 0.00 0.00 38.94 4.40
72 73 1.146930 CTGGGCGTCATGTATGGCT 59.853 57.895 0.00 0.00 39.59 4.75
73 74 1.153188 TGGGCGTCATGTATGGCTG 60.153 57.895 0.00 0.00 39.59 4.85
74 75 1.893808 GGGCGTCATGTATGGCTGG 60.894 63.158 0.00 0.00 39.59 4.85
75 76 1.893808 GGCGTCATGTATGGCTGGG 60.894 63.158 0.00 0.00 36.73 4.45
76 77 2.546494 GCGTCATGTATGGCTGGGC 61.546 63.158 0.00 0.00 0.00 5.36
101 102 2.067013 CGGAAGGTCTTTCTTTCGTCC 58.933 52.381 0.00 0.00 40.00 4.79
102 103 2.424557 GGAAGGTCTTTCTTTCGTCCC 58.575 52.381 0.00 0.00 36.03 4.46
103 104 2.038689 GGAAGGTCTTTCTTTCGTCCCT 59.961 50.000 0.00 0.00 36.03 4.20
104 105 2.841442 AGGTCTTTCTTTCGTCCCTG 57.159 50.000 0.00 0.00 0.00 4.45
105 106 2.047830 AGGTCTTTCTTTCGTCCCTGT 58.952 47.619 0.00 0.00 0.00 4.00
106 107 3.236896 AGGTCTTTCTTTCGTCCCTGTA 58.763 45.455 0.00 0.00 0.00 2.74
107 108 3.644738 AGGTCTTTCTTTCGTCCCTGTAA 59.355 43.478 0.00 0.00 0.00 2.41
108 109 4.102054 AGGTCTTTCTTTCGTCCCTGTAAA 59.898 41.667 0.00 0.00 0.00 2.01
109 110 4.212847 GGTCTTTCTTTCGTCCCTGTAAAC 59.787 45.833 0.00 0.00 0.00 2.01
110 111 4.812626 GTCTTTCTTTCGTCCCTGTAAACA 59.187 41.667 0.00 0.00 0.00 2.83
111 112 5.469084 GTCTTTCTTTCGTCCCTGTAAACAT 59.531 40.000 0.00 0.00 0.00 2.71
112 113 6.017357 GTCTTTCTTTCGTCCCTGTAAACATT 60.017 38.462 0.00 0.00 0.00 2.71
113 114 5.682943 TTCTTTCGTCCCTGTAAACATTG 57.317 39.130 0.00 0.00 0.00 2.82
114 115 4.710324 TCTTTCGTCCCTGTAAACATTGT 58.290 39.130 0.00 0.00 0.00 2.71
115 116 4.513692 TCTTTCGTCCCTGTAAACATTGTG 59.486 41.667 0.00 0.00 0.00 3.33
116 117 3.755112 TCGTCCCTGTAAACATTGTGA 57.245 42.857 0.00 0.00 0.00 3.58
117 118 3.395639 TCGTCCCTGTAAACATTGTGAC 58.604 45.455 0.00 0.00 0.00 3.67
118 119 2.156891 CGTCCCTGTAAACATTGTGACG 59.843 50.000 8.54 8.54 38.42 4.35
119 120 2.482721 GTCCCTGTAAACATTGTGACGG 59.517 50.000 0.00 0.00 0.00 4.79
120 121 1.810151 CCCTGTAAACATTGTGACGGG 59.190 52.381 17.50 17.50 37.97 5.28
121 122 2.551287 CCCTGTAAACATTGTGACGGGA 60.551 50.000 22.82 0.00 40.25 5.14
122 123 3.343617 CCTGTAAACATTGTGACGGGAT 58.656 45.455 18.85 0.00 40.25 3.85
123 124 3.126858 CCTGTAAACATTGTGACGGGATG 59.873 47.826 18.85 0.00 40.25 3.51
124 125 4.000325 CTGTAAACATTGTGACGGGATGA 59.000 43.478 0.00 0.00 0.00 2.92
125 126 4.390264 TGTAAACATTGTGACGGGATGAA 58.610 39.130 0.00 0.00 0.00 2.57
126 127 5.007034 TGTAAACATTGTGACGGGATGAAT 58.993 37.500 0.00 0.00 0.00 2.57
127 128 6.174049 TGTAAACATTGTGACGGGATGAATA 58.826 36.000 0.00 0.00 0.00 1.75
128 129 6.655425 TGTAAACATTGTGACGGGATGAATAA 59.345 34.615 0.00 0.00 0.00 1.40
129 130 6.582677 AAACATTGTGACGGGATGAATAAA 57.417 33.333 0.00 0.00 0.00 1.40
130 131 5.818136 ACATTGTGACGGGATGAATAAAG 57.182 39.130 0.00 0.00 0.00 1.85
131 132 4.096382 ACATTGTGACGGGATGAATAAAGC 59.904 41.667 0.00 0.00 0.00 3.51
132 133 3.627395 TGTGACGGGATGAATAAAGCT 57.373 42.857 0.00 0.00 0.00 3.74
133 134 3.950397 TGTGACGGGATGAATAAAGCTT 58.050 40.909 0.00 0.00 0.00 3.74
134 135 3.938963 TGTGACGGGATGAATAAAGCTTC 59.061 43.478 0.00 0.00 0.00 3.86
135 136 3.001330 GTGACGGGATGAATAAAGCTTCG 59.999 47.826 0.00 0.00 0.00 3.79
136 137 1.940613 ACGGGATGAATAAAGCTTCGC 59.059 47.619 0.00 0.00 0.00 4.70
137 138 1.070577 CGGGATGAATAAAGCTTCGCG 60.071 52.381 0.00 0.00 38.66 5.87
138 139 2.210116 GGGATGAATAAAGCTTCGCGA 58.790 47.619 3.71 3.71 0.00 5.87
139 140 2.221981 GGGATGAATAAAGCTTCGCGAG 59.778 50.000 9.59 4.97 0.00 5.03
140 141 3.123804 GGATGAATAAAGCTTCGCGAGA 58.876 45.455 9.59 0.00 39.20 4.04
141 142 3.743396 GGATGAATAAAGCTTCGCGAGAT 59.257 43.478 9.59 0.00 41.60 2.75
142 143 4.212214 GGATGAATAAAGCTTCGCGAGATT 59.788 41.667 9.59 6.06 41.60 2.40
143 144 4.520743 TGAATAAAGCTTCGCGAGATTG 57.479 40.909 9.59 2.43 41.60 2.67
144 145 3.242413 TGAATAAAGCTTCGCGAGATTGC 60.242 43.478 9.59 12.72 41.60 3.56
145 146 1.006832 TAAAGCTTCGCGAGATTGCC 58.993 50.000 9.59 0.00 41.60 4.52
146 147 0.674895 AAAGCTTCGCGAGATTGCCT 60.675 50.000 9.59 0.00 41.60 4.75
147 148 0.175760 AAGCTTCGCGAGATTGCCTA 59.824 50.000 9.59 0.00 41.60 3.93
148 149 0.175760 AGCTTCGCGAGATTGCCTAA 59.824 50.000 9.59 0.00 41.60 2.69
149 150 1.006832 GCTTCGCGAGATTGCCTAAA 58.993 50.000 9.59 0.00 41.60 1.85
150 151 1.396996 GCTTCGCGAGATTGCCTAAAA 59.603 47.619 9.59 0.00 41.60 1.52
151 152 2.159572 GCTTCGCGAGATTGCCTAAAAA 60.160 45.455 9.59 0.00 41.60 1.94
175 176 7.758613 AATAAAACCTTGTAAACACAAACCG 57.241 32.000 0.00 0.00 0.00 4.44
176 177 2.855660 ACCTTGTAAACACAAACCGC 57.144 45.000 0.00 0.00 0.00 5.68
177 178 1.406180 ACCTTGTAAACACAAACCGCC 59.594 47.619 0.00 0.00 0.00 6.13
178 179 1.679153 CCTTGTAAACACAAACCGCCT 59.321 47.619 0.00 0.00 0.00 5.52
179 180 2.542824 CCTTGTAAACACAAACCGCCTG 60.543 50.000 0.00 0.00 0.00 4.85
180 181 1.752683 TGTAAACACAAACCGCCTGT 58.247 45.000 0.00 0.00 0.00 4.00
185 186 1.358759 CACAAACCGCCTGTGTTCC 59.641 57.895 2.58 0.00 39.48 3.62
186 187 1.077357 ACAAACCGCCTGTGTTCCA 60.077 52.632 0.00 0.00 0.00 3.53
187 188 1.101049 ACAAACCGCCTGTGTTCCAG 61.101 55.000 0.00 0.00 41.15 3.86
188 189 2.193536 AAACCGCCTGTGTTCCAGC 61.194 57.895 0.00 0.00 40.06 4.85
189 190 2.624674 AAACCGCCTGTGTTCCAGCT 62.625 55.000 0.00 0.00 40.06 4.24
190 191 3.052082 CCGCCTGTGTTCCAGCTG 61.052 66.667 6.78 6.78 40.06 4.24
191 192 3.730761 CGCCTGTGTTCCAGCTGC 61.731 66.667 8.66 0.00 40.06 5.25
192 193 2.282040 GCCTGTGTTCCAGCTGCT 60.282 61.111 8.66 0.00 40.06 4.24
193 194 1.900498 GCCTGTGTTCCAGCTGCTT 60.900 57.895 8.66 0.00 40.06 3.91
194 195 0.606401 GCCTGTGTTCCAGCTGCTTA 60.606 55.000 8.66 0.00 40.06 3.09
195 196 1.896220 CCTGTGTTCCAGCTGCTTAA 58.104 50.000 8.66 0.00 40.06 1.85
196 197 2.440409 CCTGTGTTCCAGCTGCTTAAT 58.560 47.619 8.66 0.00 40.06 1.40
197 198 2.821969 CCTGTGTTCCAGCTGCTTAATT 59.178 45.455 8.66 0.00 40.06 1.40
198 199 4.009675 CCTGTGTTCCAGCTGCTTAATTA 58.990 43.478 8.66 0.00 40.06 1.40
199 200 4.095483 CCTGTGTTCCAGCTGCTTAATTAG 59.905 45.833 8.66 0.80 40.06 1.73
200 201 4.651778 TGTGTTCCAGCTGCTTAATTAGT 58.348 39.130 8.66 0.00 0.00 2.24
201 202 4.695455 TGTGTTCCAGCTGCTTAATTAGTC 59.305 41.667 8.66 0.00 0.00 2.59
202 203 4.938226 GTGTTCCAGCTGCTTAATTAGTCT 59.062 41.667 8.66 0.00 0.00 3.24
240 241 1.918609 GCTGCTCGGACTAAAACTACG 59.081 52.381 0.00 0.00 0.00 3.51
241 242 2.415090 GCTGCTCGGACTAAAACTACGA 60.415 50.000 0.00 0.00 0.00 3.43
244 245 2.795117 CTCGGACTAAAACTACGAGCC 58.205 52.381 0.00 0.00 43.42 4.70
245 246 2.161855 TCGGACTAAAACTACGAGCCA 58.838 47.619 0.00 0.00 0.00 4.75
246 247 2.557924 TCGGACTAAAACTACGAGCCAA 59.442 45.455 0.00 0.00 0.00 4.52
247 248 2.665052 CGGACTAAAACTACGAGCCAAC 59.335 50.000 0.00 0.00 0.00 3.77
248 249 3.656559 GGACTAAAACTACGAGCCAACA 58.343 45.455 0.00 0.00 0.00 3.33
249 250 3.678548 GGACTAAAACTACGAGCCAACAG 59.321 47.826 0.00 0.00 0.00 3.16
250 251 4.553323 GACTAAAACTACGAGCCAACAGA 58.447 43.478 0.00 0.00 0.00 3.41
251 252 4.952460 ACTAAAACTACGAGCCAACAGAA 58.048 39.130 0.00 0.00 0.00 3.02
252 253 4.748600 ACTAAAACTACGAGCCAACAGAAC 59.251 41.667 0.00 0.00 0.00 3.01
253 254 2.902705 AACTACGAGCCAACAGAACA 57.097 45.000 0.00 0.00 0.00 3.18
254 255 2.150397 ACTACGAGCCAACAGAACAC 57.850 50.000 0.00 0.00 0.00 3.32
255 256 1.687123 ACTACGAGCCAACAGAACACT 59.313 47.619 0.00 0.00 0.00 3.55
256 257 2.288273 ACTACGAGCCAACAGAACACTC 60.288 50.000 0.00 0.00 0.00 3.51
257 258 0.249911 ACGAGCCAACAGAACACTCC 60.250 55.000 0.00 0.00 0.00 3.85
258 259 0.951040 CGAGCCAACAGAACACTCCC 60.951 60.000 0.00 0.00 0.00 4.30
259 260 0.951040 GAGCCAACAGAACACTCCCG 60.951 60.000 0.00 0.00 0.00 5.14
260 261 1.966451 GCCAACAGAACACTCCCGG 60.966 63.158 0.00 0.00 0.00 5.73
261 262 1.966451 CCAACAGAACACTCCCGGC 60.966 63.158 0.00 0.00 0.00 6.13
265 266 2.283388 AGAACACTCCCGGCCGTA 60.283 61.111 26.12 11.10 0.00 4.02
274 275 1.523032 CCCGGCCGTATGTTCCTTC 60.523 63.158 26.12 0.00 0.00 3.46
304 305 1.545582 GCTACATCTTTTGCCTTGCCA 59.454 47.619 0.00 0.00 0.00 4.92
307 308 1.276989 ACATCTTTTGCCTTGCCATGG 59.723 47.619 7.63 7.63 0.00 3.66
329 330 0.928229 GCGTATGTCGACATGGAACC 59.072 55.000 35.46 17.93 42.86 3.62
330 331 1.567504 CGTATGTCGACATGGAACCC 58.432 55.000 35.46 17.07 42.86 4.11
331 332 1.805120 CGTATGTCGACATGGAACCCC 60.805 57.143 35.46 15.61 42.86 4.95
332 333 1.485066 GTATGTCGACATGGAACCCCT 59.515 52.381 35.46 13.82 37.15 4.79
333 334 0.541863 ATGTCGACATGGAACCCCTC 59.458 55.000 29.49 0.00 34.83 4.30
334 335 0.544357 TGTCGACATGGAACCCCTCT 60.544 55.000 15.76 0.00 0.00 3.69
335 336 1.272816 TGTCGACATGGAACCCCTCTA 60.273 52.381 15.76 0.00 0.00 2.43
336 337 2.040178 GTCGACATGGAACCCCTCTAT 58.960 52.381 11.55 0.00 0.00 1.98
337 338 2.434702 GTCGACATGGAACCCCTCTATT 59.565 50.000 11.55 0.00 0.00 1.73
338 339 3.112263 TCGACATGGAACCCCTCTATTT 58.888 45.455 0.00 0.00 0.00 1.40
339 340 4.100498 GTCGACATGGAACCCCTCTATTTA 59.900 45.833 11.55 0.00 0.00 1.40
340 341 4.905456 TCGACATGGAACCCCTCTATTTAT 59.095 41.667 0.00 0.00 0.00 1.40
341 342 4.997395 CGACATGGAACCCCTCTATTTATG 59.003 45.833 0.00 0.00 0.00 1.90
342 343 5.221641 CGACATGGAACCCCTCTATTTATGA 60.222 44.000 0.00 0.00 0.00 2.15
343 344 6.590656 ACATGGAACCCCTCTATTTATGAA 57.409 37.500 0.00 0.00 0.00 2.57
344 345 6.980577 ACATGGAACCCCTCTATTTATGAAA 58.019 36.000 0.00 0.00 0.00 2.69
345 346 7.418378 ACATGGAACCCCTCTATTTATGAAAA 58.582 34.615 0.00 0.00 0.00 2.29
346 347 7.342026 ACATGGAACCCCTCTATTTATGAAAAC 59.658 37.037 0.00 0.00 0.00 2.43
347 348 6.192044 TGGAACCCCTCTATTTATGAAAACC 58.808 40.000 0.00 0.00 0.00 3.27
348 349 6.011096 TGGAACCCCTCTATTTATGAAAACCT 60.011 38.462 0.00 0.00 0.00 3.50
349 350 7.184936 TGGAACCCCTCTATTTATGAAAACCTA 59.815 37.037 0.00 0.00 0.00 3.08
350 351 8.225416 GGAACCCCTCTATTTATGAAAACCTAT 58.775 37.037 0.00 0.00 0.00 2.57
351 352 9.642343 GAACCCCTCTATTTATGAAAACCTATT 57.358 33.333 0.00 0.00 0.00 1.73
352 353 9.642343 AACCCCTCTATTTATGAAAACCTATTC 57.358 33.333 0.00 0.00 0.00 1.75
353 354 7.937394 ACCCCTCTATTTATGAAAACCTATTCG 59.063 37.037 0.00 0.00 31.80 3.34
354 355 7.937394 CCCCTCTATTTATGAAAACCTATTCGT 59.063 37.037 0.00 0.00 33.32 3.85
355 356 9.991906 CCCTCTATTTATGAAAACCTATTCGTA 57.008 33.333 0.00 0.00 31.28 3.43
429 430 8.900983 TTGCATTTAAAAATAAGGTTTGCTCT 57.099 26.923 6.29 0.00 0.00 4.09
430 431 8.900983 TGCATTTAAAAATAAGGTTTGCTCTT 57.099 26.923 6.29 0.00 0.00 2.85
431 432 9.336171 TGCATTTAAAAATAAGGTTTGCTCTTT 57.664 25.926 6.29 0.00 0.00 2.52
436 437 9.892130 TTAAAAATAAGGTTTGCTCTTTTTCCA 57.108 25.926 0.00 0.00 30.83 3.53
437 438 8.800370 AAAAATAAGGTTTGCTCTTTTTCCAA 57.200 26.923 0.00 0.00 0.00 3.53
438 439 8.800370 AAAATAAGGTTTGCTCTTTTTCCAAA 57.200 26.923 0.00 0.00 0.00 3.28
439 440 8.800370 AAATAAGGTTTGCTCTTTTTCCAAAA 57.200 26.923 0.00 0.00 31.11 2.44
440 441 8.800370 AATAAGGTTTGCTCTTTTTCCAAAAA 57.200 26.923 0.00 0.00 36.53 1.94
503 504 8.907222 AAAAAGGCTCACATTTCACAAATATT 57.093 26.923 0.00 0.00 0.00 1.28
504 505 8.907222 AAAAGGCTCACATTTCACAAATATTT 57.093 26.923 0.00 0.00 0.00 1.40
505 506 8.907222 AAAGGCTCACATTTCACAAATATTTT 57.093 26.923 0.00 0.00 0.00 1.82
506 507 8.907222 AAGGCTCACATTTCACAAATATTTTT 57.093 26.923 0.00 0.00 0.00 1.94
507 508 8.538409 AGGCTCACATTTCACAAATATTTTTC 57.462 30.769 0.00 0.00 0.00 2.29
508 509 7.603784 AGGCTCACATTTCACAAATATTTTTCC 59.396 33.333 0.00 0.00 0.00 3.13
509 510 7.387397 GGCTCACATTTCACAAATATTTTTCCA 59.613 33.333 0.00 0.00 0.00 3.53
510 511 8.938906 GCTCACATTTCACAAATATTTTTCCAT 58.061 29.630 0.00 0.00 0.00 3.41
527 528 9.908152 ATTTTTCCATTTTCTAAACCGAGTAAG 57.092 29.630 0.00 0.00 0.00 2.34
528 529 8.680039 TTTTCCATTTTCTAAACCGAGTAAGA 57.320 30.769 0.00 0.00 0.00 2.10
529 530 8.680039 TTTCCATTTTCTAAACCGAGTAAGAA 57.320 30.769 0.00 0.00 0.00 2.52
530 531 8.680039 TTCCATTTTCTAAACCGAGTAAGAAA 57.320 30.769 8.85 8.85 36.45 2.52
531 532 8.857694 TCCATTTTCTAAACCGAGTAAGAAAT 57.142 30.769 11.61 0.00 37.68 2.17
532 533 8.943002 TCCATTTTCTAAACCGAGTAAGAAATC 58.057 33.333 11.61 0.00 37.68 2.17
533 534 8.726988 CCATTTTCTAAACCGAGTAAGAAATCA 58.273 33.333 11.61 3.94 37.68 2.57
534 535 9.760660 CATTTTCTAAACCGAGTAAGAAATCAG 57.239 33.333 11.61 5.64 37.68 2.90
535 536 6.963049 TTCTAAACCGAGTAAGAAATCAGC 57.037 37.500 0.00 0.00 0.00 4.26
536 537 5.416947 TCTAAACCGAGTAAGAAATCAGCC 58.583 41.667 0.00 0.00 0.00 4.85
537 538 3.695830 AACCGAGTAAGAAATCAGCCA 57.304 42.857 0.00 0.00 0.00 4.75
538 539 3.252974 ACCGAGTAAGAAATCAGCCAG 57.747 47.619 0.00 0.00 0.00 4.85
539 540 2.832129 ACCGAGTAAGAAATCAGCCAGA 59.168 45.455 0.00 0.00 0.00 3.86
540 541 3.260884 ACCGAGTAAGAAATCAGCCAGAA 59.739 43.478 0.00 0.00 0.00 3.02
541 542 4.253685 CCGAGTAAGAAATCAGCCAGAAA 58.746 43.478 0.00 0.00 0.00 2.52
542 543 4.695455 CCGAGTAAGAAATCAGCCAGAAAA 59.305 41.667 0.00 0.00 0.00 2.29
543 544 5.181245 CCGAGTAAGAAATCAGCCAGAAAAA 59.819 40.000 0.00 0.00 0.00 1.94
544 545 6.310197 CGAGTAAGAAATCAGCCAGAAAAAG 58.690 40.000 0.00 0.00 0.00 2.27
545 546 6.147821 CGAGTAAGAAATCAGCCAGAAAAAGA 59.852 38.462 0.00 0.00 0.00 2.52
546 547 7.208225 AGTAAGAAATCAGCCAGAAAAAGAC 57.792 36.000 0.00 0.00 0.00 3.01
547 548 4.756084 AGAAATCAGCCAGAAAAAGACG 57.244 40.909 0.00 0.00 0.00 4.18
548 549 2.997485 AATCAGCCAGAAAAAGACGC 57.003 45.000 0.00 0.00 0.00 5.19
549 550 2.191128 ATCAGCCAGAAAAAGACGCT 57.809 45.000 0.00 0.00 0.00 5.07
550 551 1.512926 TCAGCCAGAAAAAGACGCTC 58.487 50.000 0.00 0.00 0.00 5.03
551 552 0.164647 CAGCCAGAAAAAGACGCTCG 59.835 55.000 0.00 0.00 0.00 5.03
552 553 1.154395 GCCAGAAAAAGACGCTCGC 60.154 57.895 0.00 0.00 0.00 5.03
553 554 1.497722 CCAGAAAAAGACGCTCGCC 59.502 57.895 0.00 0.00 0.00 5.54
554 555 1.497722 CAGAAAAAGACGCTCGCCC 59.502 57.895 0.00 0.00 0.00 6.13
555 556 1.070786 AGAAAAAGACGCTCGCCCA 59.929 52.632 0.00 0.00 0.00 5.36
556 557 0.534203 AGAAAAAGACGCTCGCCCAA 60.534 50.000 0.00 0.00 0.00 4.12
557 558 0.110192 GAAAAAGACGCTCGCCCAAG 60.110 55.000 0.00 0.00 0.00 3.61
558 559 2.130073 AAAAAGACGCTCGCCCAAGC 62.130 55.000 0.00 0.00 38.97 4.01
568 569 4.660938 GCCCAAGCCCGGTTCACT 62.661 66.667 0.00 0.00 0.00 3.41
569 570 3.074281 CCCAAGCCCGGTTCACTA 58.926 61.111 0.00 0.00 0.00 2.74
570 571 1.376812 CCCAAGCCCGGTTCACTAC 60.377 63.158 0.00 0.00 0.00 2.73
571 572 1.373435 CCAAGCCCGGTTCACTACA 59.627 57.895 0.00 0.00 0.00 2.74
572 573 0.673644 CCAAGCCCGGTTCACTACAG 60.674 60.000 0.00 0.00 0.00 2.74
573 574 0.034896 CAAGCCCGGTTCACTACAGT 59.965 55.000 0.00 0.00 0.00 3.55
574 575 0.034896 AAGCCCGGTTCACTACAGTG 59.965 55.000 0.00 2.84 46.91 3.66
575 576 2.033194 GCCCGGTTCACTACAGTGC 61.033 63.158 0.00 0.00 45.25 4.40
576 577 1.369692 CCCGGTTCACTACAGTGCA 59.630 57.895 0.00 0.00 45.25 4.57
577 578 0.949105 CCCGGTTCACTACAGTGCAC 60.949 60.000 9.40 9.40 45.25 4.57
578 579 0.033504 CCGGTTCACTACAGTGCACT 59.966 55.000 15.25 15.25 45.25 4.40
579 580 2.200858 CCGGTTCACTACAGTGCACTG 61.201 57.143 38.76 38.76 44.44 3.66
591 592 2.941064 CAGTGCACTGGTTCTATGATGG 59.059 50.000 34.65 8.20 40.20 3.51
592 593 2.092753 AGTGCACTGGTTCTATGATGGG 60.093 50.000 20.97 0.00 0.00 4.00
593 594 1.312815 GCACTGGTTCTATGATGGGC 58.687 55.000 0.00 0.00 0.00 5.36
594 595 1.133976 GCACTGGTTCTATGATGGGCT 60.134 52.381 0.00 0.00 0.00 5.19
595 596 2.104792 GCACTGGTTCTATGATGGGCTA 59.895 50.000 0.00 0.00 0.00 3.93
596 597 3.805108 GCACTGGTTCTATGATGGGCTAG 60.805 52.174 0.00 0.00 0.00 3.42
597 598 2.370189 ACTGGTTCTATGATGGGCTAGC 59.630 50.000 6.04 6.04 0.00 3.42
598 599 1.344438 TGGTTCTATGATGGGCTAGCG 59.656 52.381 9.00 0.00 0.00 4.26
599 600 1.433534 GTTCTATGATGGGCTAGCGC 58.566 55.000 23.93 23.93 0.00 5.92
600 601 1.047801 TTCTATGATGGGCTAGCGCA 58.952 50.000 33.22 33.22 42.90 6.09
601 602 0.605083 TCTATGATGGGCTAGCGCAG 59.395 55.000 33.81 22.14 42.04 5.18
602 603 0.319728 CTATGATGGGCTAGCGCAGT 59.680 55.000 33.81 24.73 42.04 4.40
603 604 0.758734 TATGATGGGCTAGCGCAGTT 59.241 50.000 33.81 21.78 42.04 3.16
604 605 0.107017 ATGATGGGCTAGCGCAGTTT 60.107 50.000 33.81 21.09 42.04 2.66
605 606 0.322456 TGATGGGCTAGCGCAGTTTT 60.322 50.000 33.81 20.74 42.04 2.43
606 607 0.811281 GATGGGCTAGCGCAGTTTTT 59.189 50.000 33.81 20.39 42.04 1.94
632 633 3.838120 GTTTTGAGAAACATGGGCTAGC 58.162 45.455 6.04 6.04 43.65 3.42
633 634 2.128771 TTGAGAAACATGGGCTAGCC 57.871 50.000 26.55 26.55 0.00 3.93
643 644 4.567318 GGCTAGCCCAGTTGGATG 57.433 61.111 24.19 0.00 37.39 3.51
644 645 1.609783 GGCTAGCCCAGTTGGATGT 59.390 57.895 24.19 0.00 37.39 3.06
645 646 0.749454 GGCTAGCCCAGTTGGATGTG 60.749 60.000 24.19 0.00 37.39 3.21
646 647 0.035056 GCTAGCCCAGTTGGATGTGT 60.035 55.000 2.29 0.00 37.39 3.72
647 648 1.742761 CTAGCCCAGTTGGATGTGTG 58.257 55.000 0.00 0.00 37.39 3.82
648 649 0.322456 TAGCCCAGTTGGATGTGTGC 60.322 55.000 0.00 0.00 37.39 4.57
649 650 2.639327 GCCCAGTTGGATGTGTGCC 61.639 63.158 0.00 0.00 37.39 5.01
650 651 2.334946 CCCAGTTGGATGTGTGCCG 61.335 63.158 0.00 0.00 37.39 5.69
651 652 1.600636 CCAGTTGGATGTGTGCCGT 60.601 57.895 0.00 0.00 37.39 5.68
652 653 1.575922 CAGTTGGATGTGTGCCGTG 59.424 57.895 0.00 0.00 0.00 4.94
653 654 2.255252 GTTGGATGTGTGCCGTGC 59.745 61.111 0.00 0.00 0.00 5.34
654 655 3.353029 TTGGATGTGTGCCGTGCG 61.353 61.111 0.00 0.00 0.00 5.34
655 656 3.816367 TTGGATGTGTGCCGTGCGA 62.816 57.895 0.00 0.00 0.00 5.10
656 657 3.047280 GGATGTGTGCCGTGCGAA 61.047 61.111 0.00 0.00 0.00 4.70
657 658 2.476051 GATGTGTGCCGTGCGAAG 59.524 61.111 0.00 0.00 0.00 3.79
670 671 3.041940 CGAAGCGCCCGACAGTTT 61.042 61.111 13.63 0.00 0.00 2.66
671 672 2.604174 CGAAGCGCCCGACAGTTTT 61.604 57.895 13.63 0.00 0.00 2.43
672 673 1.082104 GAAGCGCCCGACAGTTTTG 60.082 57.895 2.29 0.00 0.00 2.44
673 674 1.503818 GAAGCGCCCGACAGTTTTGA 61.504 55.000 2.29 0.00 0.00 2.69
674 675 1.782028 AAGCGCCCGACAGTTTTGAC 61.782 55.000 2.29 0.00 0.00 3.18
675 676 2.549282 CGCCCGACAGTTTTGACG 59.451 61.111 0.00 0.00 41.13 4.35
681 682 2.645628 CGACAGTTTTGACGGAACAG 57.354 50.000 0.00 0.00 38.51 3.16
682 683 1.931172 CGACAGTTTTGACGGAACAGT 59.069 47.619 0.00 0.00 38.51 3.55
683 684 2.350498 CGACAGTTTTGACGGAACAGTT 59.650 45.455 0.00 0.00 38.51 3.16
684 685 3.181514 CGACAGTTTTGACGGAACAGTTT 60.182 43.478 0.00 0.00 38.51 2.66
685 686 4.670735 CGACAGTTTTGACGGAACAGTTTT 60.671 41.667 0.00 0.00 38.51 2.43
686 687 5.128992 ACAGTTTTGACGGAACAGTTTTT 57.871 34.783 0.00 0.00 0.00 1.94
705 706 2.563471 TTTTTGACGGGGTTTTGACG 57.437 45.000 0.00 0.00 0.00 4.35
706 707 0.739561 TTTTGACGGGGTTTTGACGG 59.260 50.000 0.00 0.00 0.00 4.79
707 708 0.107312 TTTGACGGGGTTTTGACGGA 60.107 50.000 0.00 0.00 0.00 4.69
708 709 0.107312 TTGACGGGGTTTTGACGGAA 60.107 50.000 0.00 0.00 0.00 4.30
709 710 0.814812 TGACGGGGTTTTGACGGAAC 60.815 55.000 0.00 0.00 0.00 3.62
710 711 0.814812 GACGGGGTTTTGACGGAACA 60.815 55.000 0.00 0.00 0.00 3.18
711 712 0.816421 ACGGGGTTTTGACGGAACAG 60.816 55.000 0.00 0.00 0.00 3.16
712 713 0.816421 CGGGGTTTTGACGGAACAGT 60.816 55.000 0.00 0.00 0.00 3.55
713 714 1.395635 GGGGTTTTGACGGAACAGTT 58.604 50.000 0.00 0.00 0.00 3.16
714 715 1.752498 GGGGTTTTGACGGAACAGTTT 59.248 47.619 0.00 0.00 0.00 2.66
715 716 2.480587 GGGGTTTTGACGGAACAGTTTG 60.481 50.000 0.00 0.00 0.00 2.93
716 717 2.164827 GGGTTTTGACGGAACAGTTTGT 59.835 45.455 0.00 0.00 0.00 2.83
717 718 3.175929 GGTTTTGACGGAACAGTTTGTG 58.824 45.455 0.00 0.00 0.00 3.33
718 719 3.119779 GGTTTTGACGGAACAGTTTGTGA 60.120 43.478 0.00 0.00 0.00 3.58
719 720 4.095610 GTTTTGACGGAACAGTTTGTGAG 58.904 43.478 0.00 0.00 0.00 3.51
720 721 1.948104 TGACGGAACAGTTTGTGAGG 58.052 50.000 0.00 0.00 0.00 3.86
721 722 1.226746 GACGGAACAGTTTGTGAGGG 58.773 55.000 0.00 0.00 0.00 4.30
722 723 0.818040 ACGGAACAGTTTGTGAGGGC 60.818 55.000 0.00 0.00 0.00 5.19
723 724 1.515521 CGGAACAGTTTGTGAGGGCC 61.516 60.000 0.00 0.00 0.00 5.80
724 725 1.515521 GGAACAGTTTGTGAGGGCCG 61.516 60.000 0.00 0.00 0.00 6.13
725 726 0.818040 GAACAGTTTGTGAGGGCCGT 60.818 55.000 0.00 0.00 0.00 5.68
726 727 0.395173 AACAGTTTGTGAGGGCCGTT 60.395 50.000 0.00 0.00 0.00 4.44
727 728 1.101049 ACAGTTTGTGAGGGCCGTTG 61.101 55.000 0.00 0.00 0.00 4.10
728 729 1.528309 AGTTTGTGAGGGCCGTTGG 60.528 57.895 0.00 0.00 0.00 3.77
729 730 1.527380 GTTTGTGAGGGCCGTTGGA 60.527 57.895 0.00 0.00 0.00 3.53
730 731 1.104577 GTTTGTGAGGGCCGTTGGAA 61.105 55.000 0.00 0.00 0.00 3.53
731 732 0.178975 TTTGTGAGGGCCGTTGGAAT 60.179 50.000 0.00 0.00 0.00 3.01
732 733 0.608035 TTGTGAGGGCCGTTGGAATC 60.608 55.000 0.00 0.00 0.00 2.52
733 734 2.106683 GTGAGGGCCGTTGGAATCG 61.107 63.158 0.00 0.00 0.00 3.34
734 735 2.287274 TGAGGGCCGTTGGAATCGA 61.287 57.895 0.00 0.00 0.00 3.59
735 736 1.146263 GAGGGCCGTTGGAATCGAT 59.854 57.895 0.00 0.00 0.00 3.59
736 737 0.880718 GAGGGCCGTTGGAATCGATC 60.881 60.000 0.00 0.00 0.00 3.69
737 738 1.153249 GGGCCGTTGGAATCGATCA 60.153 57.895 0.00 0.00 0.00 2.92
738 739 1.436983 GGGCCGTTGGAATCGATCAC 61.437 60.000 0.00 0.00 0.00 3.06
739 740 1.636340 GCCGTTGGAATCGATCACG 59.364 57.895 0.00 5.44 41.26 4.35
740 741 1.082117 GCCGTTGGAATCGATCACGT 61.082 55.000 0.00 0.00 40.69 4.49
741 742 1.355971 CCGTTGGAATCGATCACGTT 58.644 50.000 0.00 0.00 40.69 3.99
742 743 1.060553 CCGTTGGAATCGATCACGTTG 59.939 52.381 0.00 0.00 40.69 4.10
743 744 1.724623 CGTTGGAATCGATCACGTTGT 59.275 47.619 0.00 0.00 40.69 3.32
744 745 2.222508 CGTTGGAATCGATCACGTTGTC 60.223 50.000 0.00 0.00 40.69 3.18
745 746 2.993899 GTTGGAATCGATCACGTTGTCT 59.006 45.455 0.00 0.00 40.69 3.41
746 747 4.171005 GTTGGAATCGATCACGTTGTCTA 58.829 43.478 0.00 0.00 40.69 2.59
747 748 3.766151 TGGAATCGATCACGTTGTCTAC 58.234 45.455 0.00 0.00 40.69 2.59
755 756 2.564975 CGTTGTCTACGTCCGGCT 59.435 61.111 0.00 0.00 45.14 5.52
756 757 1.513586 CGTTGTCTACGTCCGGCTC 60.514 63.158 0.00 0.00 45.14 4.70
757 758 1.513586 GTTGTCTACGTCCGGCTCG 60.514 63.158 15.21 15.21 0.00 5.03
768 769 2.806237 CGGCTCGGACTAGAACCC 59.194 66.667 0.00 0.00 0.00 4.11
769 770 2.050350 CGGCTCGGACTAGAACCCA 61.050 63.158 0.00 0.00 0.00 4.51
770 771 1.392710 CGGCTCGGACTAGAACCCAT 61.393 60.000 0.00 0.00 0.00 4.00
771 772 0.389757 GGCTCGGACTAGAACCCATC 59.610 60.000 0.00 0.00 0.00 3.51
772 773 1.112113 GCTCGGACTAGAACCCATCA 58.888 55.000 0.00 0.00 0.00 3.07
773 774 1.202428 GCTCGGACTAGAACCCATCAC 60.202 57.143 0.00 0.00 0.00 3.06
774 775 1.409427 CTCGGACTAGAACCCATCACC 59.591 57.143 0.00 0.00 0.00 4.02
775 776 0.102481 CGGACTAGAACCCATCACCG 59.898 60.000 0.00 0.00 0.00 4.94
776 777 1.481871 GGACTAGAACCCATCACCGA 58.518 55.000 0.00 0.00 0.00 4.69
777 778 2.040178 GGACTAGAACCCATCACCGAT 58.960 52.381 0.00 0.00 0.00 4.18
778 779 2.434702 GGACTAGAACCCATCACCGATT 59.565 50.000 0.00 0.00 0.00 3.34
779 780 3.640029 GGACTAGAACCCATCACCGATTA 59.360 47.826 0.00 0.00 0.00 1.75
780 781 4.283722 GGACTAGAACCCATCACCGATTAT 59.716 45.833 0.00 0.00 0.00 1.28
781 782 5.221661 GGACTAGAACCCATCACCGATTATT 60.222 44.000 0.00 0.00 0.00 1.40
782 783 6.014840 GGACTAGAACCCATCACCGATTATTA 60.015 42.308 0.00 0.00 0.00 0.98
783 784 6.994221 ACTAGAACCCATCACCGATTATTAG 58.006 40.000 0.00 0.00 0.00 1.73
784 785 5.888982 AGAACCCATCACCGATTATTAGT 57.111 39.130 0.00 0.00 0.00 2.24
785 786 6.989155 AGAACCCATCACCGATTATTAGTA 57.011 37.500 0.00 0.00 0.00 1.82
786 787 7.554959 AGAACCCATCACCGATTATTAGTAT 57.445 36.000 0.00 0.00 0.00 2.12
787 788 8.660295 AGAACCCATCACCGATTATTAGTATA 57.340 34.615 0.00 0.00 0.00 1.47
788 789 9.268282 AGAACCCATCACCGATTATTAGTATAT 57.732 33.333 0.00 0.00 0.00 0.86
789 790 9.886132 GAACCCATCACCGATTATTAGTATATT 57.114 33.333 0.00 0.00 0.00 1.28
790 791 9.667107 AACCCATCACCGATTATTAGTATATTG 57.333 33.333 0.00 0.00 0.00 1.90
791 792 8.822805 ACCCATCACCGATTATTAGTATATTGT 58.177 33.333 0.00 0.00 0.00 2.71
792 793 9.314321 CCCATCACCGATTATTAGTATATTGTC 57.686 37.037 0.00 0.00 0.00 3.18
793 794 9.314321 CCATCACCGATTATTAGTATATTGTCC 57.686 37.037 0.00 0.00 0.00 4.02
796 797 9.304335 TCACCGATTATTAGTATATTGTCCTGA 57.696 33.333 0.00 0.00 0.00 3.86
797 798 9.923143 CACCGATTATTAGTATATTGTCCTGAA 57.077 33.333 0.00 0.00 0.00 3.02
815 816 9.449719 TGTCCTGAAGAAAAAGATTATTACTCC 57.550 33.333 0.00 0.00 0.00 3.85
816 817 9.674068 GTCCTGAAGAAAAAGATTATTACTCCT 57.326 33.333 0.00 0.00 0.00 3.69
855 856 8.554490 AGGACTTGTAATATGTATCTCCTTGT 57.446 34.615 0.00 0.00 0.00 3.16
856 857 9.656323 AGGACTTGTAATATGTATCTCCTTGTA 57.344 33.333 0.00 0.00 0.00 2.41
865 866 6.737254 ATGTATCTCCTTGTAAACAAACCG 57.263 37.500 0.00 0.00 35.15 4.44
866 867 5.613329 TGTATCTCCTTGTAAACAAACCGT 58.387 37.500 0.00 0.00 35.15 4.83
867 868 5.467399 TGTATCTCCTTGTAAACAAACCGTG 59.533 40.000 0.00 0.00 35.15 4.94
868 869 4.139859 TCTCCTTGTAAACAAACCGTGA 57.860 40.909 0.00 0.00 35.15 4.35
869 870 4.515361 TCTCCTTGTAAACAAACCGTGAA 58.485 39.130 0.00 0.00 35.15 3.18
870 871 4.942483 TCTCCTTGTAAACAAACCGTGAAA 59.058 37.500 0.00 0.00 35.15 2.69
871 872 5.415077 TCTCCTTGTAAACAAACCGTGAAAA 59.585 36.000 0.00 0.00 35.15 2.29
872 873 5.642686 TCCTTGTAAACAAACCGTGAAAAG 58.357 37.500 0.00 0.00 35.15 2.27
873 874 5.415077 TCCTTGTAAACAAACCGTGAAAAGA 59.585 36.000 0.00 0.00 35.15 2.52
874 875 5.741982 CCTTGTAAACAAACCGTGAAAAGAG 59.258 40.000 0.00 0.00 35.15 2.85
875 876 6.403855 CCTTGTAAACAAACCGTGAAAAGAGA 60.404 38.462 0.00 0.00 35.15 3.10
876 877 6.687081 TGTAAACAAACCGTGAAAAGAGAT 57.313 33.333 0.00 0.00 0.00 2.75
877 878 6.721321 TGTAAACAAACCGTGAAAAGAGATC 58.279 36.000 0.00 0.00 0.00 2.75
878 879 5.828299 AAACAAACCGTGAAAAGAGATCA 57.172 34.783 0.00 0.00 0.00 2.92
879 880 5.828299 AACAAACCGTGAAAAGAGATCAA 57.172 34.783 0.00 0.00 0.00 2.57
880 881 5.828299 ACAAACCGTGAAAAGAGATCAAA 57.172 34.783 0.00 0.00 0.00 2.69
881 882 5.821204 ACAAACCGTGAAAAGAGATCAAAG 58.179 37.500 0.00 0.00 0.00 2.77
882 883 5.588648 ACAAACCGTGAAAAGAGATCAAAGA 59.411 36.000 0.00 0.00 0.00 2.52
883 884 6.094881 ACAAACCGTGAAAAGAGATCAAAGAA 59.905 34.615 0.00 0.00 0.00 2.52
884 885 5.931441 ACCGTGAAAAGAGATCAAAGAAG 57.069 39.130 0.00 0.00 0.00 2.85
885 886 5.611374 ACCGTGAAAAGAGATCAAAGAAGA 58.389 37.500 0.00 0.00 0.00 2.87
886 887 6.055588 ACCGTGAAAAGAGATCAAAGAAGAA 58.944 36.000 0.00 0.00 0.00 2.52
887 888 6.542370 ACCGTGAAAAGAGATCAAAGAAGAAA 59.458 34.615 0.00 0.00 0.00 2.52
888 889 7.229506 ACCGTGAAAAGAGATCAAAGAAGAAAT 59.770 33.333 0.00 0.00 0.00 2.17
889 890 8.721478 CCGTGAAAAGAGATCAAAGAAGAAATA 58.279 33.333 0.00 0.00 0.00 1.40
913 914 7.565323 AAAATACTACTACTACTAGCTGCGT 57.435 36.000 0.00 0.00 0.00 5.24
914 915 6.542574 AATACTACTACTACTAGCTGCGTG 57.457 41.667 0.00 0.00 0.00 5.34
915 916 2.613133 ACTACTACTACTAGCTGCGTGC 59.387 50.000 0.00 0.00 43.29 5.34
916 917 0.739561 ACTACTACTAGCTGCGTGCC 59.260 55.000 0.00 0.00 44.23 5.01
917 918 0.738975 CTACTACTAGCTGCGTGCCA 59.261 55.000 0.00 0.00 44.23 4.92
918 919 1.338337 CTACTACTAGCTGCGTGCCAT 59.662 52.381 0.00 0.00 44.23 4.40
919 920 0.103208 ACTACTAGCTGCGTGCCATC 59.897 55.000 0.00 0.00 44.23 3.51
920 921 0.103026 CTACTAGCTGCGTGCCATCA 59.897 55.000 0.00 0.00 44.23 3.07
921 922 0.534873 TACTAGCTGCGTGCCATCAA 59.465 50.000 0.00 0.00 44.23 2.57
922 923 0.321564 ACTAGCTGCGTGCCATCAAA 60.322 50.000 0.00 0.00 44.23 2.69
923 924 1.019673 CTAGCTGCGTGCCATCAAAT 58.980 50.000 0.00 0.00 44.23 2.32
924 925 1.003116 CTAGCTGCGTGCCATCAAATC 60.003 52.381 0.00 0.00 44.23 2.17
925 926 1.584483 GCTGCGTGCCATCAAATCG 60.584 57.895 0.00 0.00 35.15 3.34
926 927 1.584483 CTGCGTGCCATCAAATCGC 60.584 57.895 0.00 0.00 45.70 4.58
927 928 2.278142 GCGTGCCATCAAATCGCC 60.278 61.111 0.00 0.00 40.83 5.54
928 929 3.050166 GCGTGCCATCAAATCGCCA 62.050 57.895 0.00 0.00 40.83 5.69
929 930 1.063006 CGTGCCATCAAATCGCCAG 59.937 57.895 0.00 0.00 0.00 4.85
930 931 1.647545 CGTGCCATCAAATCGCCAGT 61.648 55.000 0.00 0.00 0.00 4.00
931 932 0.179156 GTGCCATCAAATCGCCAGTG 60.179 55.000 0.00 0.00 0.00 3.66
932 933 0.608856 TGCCATCAAATCGCCAGTGT 60.609 50.000 0.00 0.00 0.00 3.55
933 934 0.527565 GCCATCAAATCGCCAGTGTT 59.472 50.000 0.00 0.00 0.00 3.32
934 935 1.468054 GCCATCAAATCGCCAGTGTTC 60.468 52.381 0.00 0.00 0.00 3.18
935 936 1.133025 CCATCAAATCGCCAGTGTTCC 59.867 52.381 0.00 0.00 0.00 3.62
936 937 1.811965 CATCAAATCGCCAGTGTTCCA 59.188 47.619 0.00 0.00 0.00 3.53
937 938 1.522668 TCAAATCGCCAGTGTTCCAG 58.477 50.000 0.00 0.00 0.00 3.86
938 939 0.109597 CAAATCGCCAGTGTTCCAGC 60.110 55.000 0.00 0.00 0.00 4.85
939 940 0.537143 AAATCGCCAGTGTTCCAGCA 60.537 50.000 0.00 0.00 0.00 4.41
940 941 0.957395 AATCGCCAGTGTTCCAGCAG 60.957 55.000 0.00 0.00 0.00 4.24
941 942 3.730761 CGCCAGTGTTCCAGCAGC 61.731 66.667 0.00 0.00 0.00 5.25
942 943 2.282040 GCCAGTGTTCCAGCAGCT 60.282 61.111 0.00 0.00 0.00 4.24
943 944 1.900498 GCCAGTGTTCCAGCAGCTT 60.900 57.895 0.00 0.00 0.00 3.74
944 945 0.606401 GCCAGTGTTCCAGCAGCTTA 60.606 55.000 0.00 0.00 0.00 3.09
945 946 1.896220 CCAGTGTTCCAGCAGCTTAA 58.104 50.000 0.00 0.00 0.00 1.85
946 947 2.229792 CCAGTGTTCCAGCAGCTTAAA 58.770 47.619 0.00 0.00 0.00 1.52
947 948 2.622942 CCAGTGTTCCAGCAGCTTAAAA 59.377 45.455 0.00 0.00 0.00 1.52
948 949 3.068024 CCAGTGTTCCAGCAGCTTAAAAA 59.932 43.478 0.00 0.00 0.00 1.94
949 950 4.262164 CCAGTGTTCCAGCAGCTTAAAAAT 60.262 41.667 0.00 0.00 0.00 1.82
950 951 5.048083 CCAGTGTTCCAGCAGCTTAAAAATA 60.048 40.000 0.00 0.00 0.00 1.40
951 952 6.088824 CAGTGTTCCAGCAGCTTAAAAATAG 58.911 40.000 0.00 0.00 0.00 1.73
952 953 4.859245 GTGTTCCAGCAGCTTAAAAATAGC 59.141 41.667 0.00 0.00 38.93 2.97
953 954 4.082245 TGTTCCAGCAGCTTAAAAATAGCC 60.082 41.667 0.00 0.00 39.47 3.93
954 955 3.968265 TCCAGCAGCTTAAAAATAGCCT 58.032 40.909 0.00 0.00 39.47 4.58
955 956 4.344104 TCCAGCAGCTTAAAAATAGCCTT 58.656 39.130 0.00 0.00 39.47 4.35
956 957 4.772100 TCCAGCAGCTTAAAAATAGCCTTT 59.228 37.500 0.00 0.00 39.47 3.11
957 958 4.866486 CCAGCAGCTTAAAAATAGCCTTTG 59.134 41.667 0.00 0.00 39.47 2.77
958 959 5.473039 CAGCAGCTTAAAAATAGCCTTTGT 58.527 37.500 0.00 0.00 39.47 2.83
959 960 5.346822 CAGCAGCTTAAAAATAGCCTTTGTG 59.653 40.000 0.00 0.00 39.47 3.33
960 961 5.011023 AGCAGCTTAAAAATAGCCTTTGTGT 59.989 36.000 0.00 0.00 39.47 3.72
961 962 5.696270 GCAGCTTAAAAATAGCCTTTGTGTT 59.304 36.000 0.00 0.00 39.47 3.32
962 963 6.346838 GCAGCTTAAAAATAGCCTTTGTGTTG 60.347 38.462 0.00 0.00 39.47 3.33
963 964 6.701400 CAGCTTAAAAATAGCCTTTGTGTTGT 59.299 34.615 0.00 0.00 39.47 3.32
964 965 7.865385 CAGCTTAAAAATAGCCTTTGTGTTGTA 59.135 33.333 0.00 0.00 39.47 2.41
965 966 8.082242 AGCTTAAAAATAGCCTTTGTGTTGTAG 58.918 33.333 0.00 0.00 39.47 2.74
966 967 7.865889 GCTTAAAAATAGCCTTTGTGTTGTAGT 59.134 33.333 0.00 0.00 32.45 2.73
969 970 7.448748 AAAATAGCCTTTGTGTTGTAGTAGG 57.551 36.000 0.00 0.00 0.00 3.18
970 971 6.368779 AATAGCCTTTGTGTTGTAGTAGGA 57.631 37.500 0.00 0.00 0.00 2.94
971 972 4.273148 AGCCTTTGTGTTGTAGTAGGAG 57.727 45.455 0.00 0.00 0.00 3.69
972 973 3.646637 AGCCTTTGTGTTGTAGTAGGAGT 59.353 43.478 0.00 0.00 0.00 3.85
973 974 4.836736 AGCCTTTGTGTTGTAGTAGGAGTA 59.163 41.667 0.00 0.00 0.00 2.59
974 975 5.484290 AGCCTTTGTGTTGTAGTAGGAGTAT 59.516 40.000 0.00 0.00 0.00 2.12
975 976 6.013639 AGCCTTTGTGTTGTAGTAGGAGTATT 60.014 38.462 0.00 0.00 0.00 1.89
976 977 7.179694 AGCCTTTGTGTTGTAGTAGGAGTATTA 59.820 37.037 0.00 0.00 0.00 0.98
977 978 7.277319 GCCTTTGTGTTGTAGTAGGAGTATTAC 59.723 40.741 0.00 0.00 0.00 1.89
978 979 7.487189 CCTTTGTGTTGTAGTAGGAGTATTACG 59.513 40.741 0.00 0.00 0.00 3.18
979 980 7.452880 TTGTGTTGTAGTAGGAGTATTACGT 57.547 36.000 0.00 0.00 0.00 3.57
980 981 8.560355 TTGTGTTGTAGTAGGAGTATTACGTA 57.440 34.615 0.00 0.00 0.00 3.57
981 982 7.974675 TGTGTTGTAGTAGGAGTATTACGTAC 58.025 38.462 0.00 0.00 0.00 3.67
982 983 7.119997 GTGTTGTAGTAGGAGTATTACGTACG 58.880 42.308 15.01 15.01 38.38 3.67
983 984 6.816640 TGTTGTAGTAGGAGTATTACGTACGT 59.183 38.462 25.98 25.98 38.38 3.57
984 985 6.828502 TGTAGTAGGAGTATTACGTACGTG 57.171 41.667 30.25 0.00 38.38 4.49
985 986 4.802876 AGTAGGAGTATTACGTACGTGC 57.197 45.455 30.25 16.64 38.38 5.34
986 987 2.744787 AGGAGTATTACGTACGTGCG 57.255 50.000 30.25 24.57 38.38 5.34
987 988 1.115639 GGAGTATTACGTACGTGCGC 58.884 55.000 30.25 17.42 38.38 6.09
988 989 1.115639 GAGTATTACGTACGTGCGCC 58.884 55.000 30.25 15.17 38.38 6.53
989 990 0.589729 AGTATTACGTACGTGCGCCG 60.590 55.000 30.25 15.25 44.03 6.46
990 991 1.938814 TATTACGTACGTGCGCCGC 60.939 57.895 30.25 0.00 41.42 6.53
1079 1080 0.466189 CTCCATCCCCAAATCCACGG 60.466 60.000 0.00 0.00 0.00 4.94
1150 1151 2.910479 AGACCCACACGAGCGACA 60.910 61.111 0.00 0.00 0.00 4.35
1164 1165 2.266055 GACAAGGGAGCCCGACTG 59.734 66.667 0.00 2.17 41.95 3.51
1242 1249 3.135027 GGAGATCCTACTCCGCCTT 57.865 57.895 0.00 0.00 45.30 4.35
1288 1295 1.659794 GCATCCACGGTTTGCAAGT 59.340 52.632 0.00 0.00 36.40 3.16
1328 1335 3.787001 CCCCCAGTTCCTCCGCTC 61.787 72.222 0.00 0.00 0.00 5.03
1335 1342 2.101233 GTTCCTCCGCTCTTTCCGC 61.101 63.158 0.00 0.00 0.00 5.54
1382 1389 2.633657 CTTGCTCGTGTGTGGCAC 59.366 61.111 11.55 11.55 44.36 5.01
1398 1405 0.534203 GCACCAACCACGAGAAGGAA 60.534 55.000 0.00 0.00 0.00 3.36
1444 1452 4.838152 GCATCCCTCCGAAGCGCA 62.838 66.667 11.47 0.00 0.00 6.09
1472 1480 6.069615 ACCCTTGGATGCTACAATAAACTACT 60.070 38.462 0.00 0.00 0.00 2.57
1475 1483 8.184192 CCTTGGATGCTACAATAAACTACTTTG 58.816 37.037 0.00 0.00 0.00 2.77
1509 1517 2.440796 CGCCACGGTAGGGTCCTA 60.441 66.667 0.00 0.00 0.00 2.94
1538 1546 3.851098 ACATCAAGAGTAAAGAGGTCGC 58.149 45.455 0.00 0.00 0.00 5.19
1593 1601 0.105964 TGTCCGTTCCACCAGAGTTG 59.894 55.000 0.00 0.00 0.00 3.16
1852 2172 7.057894 TGGTAATATCATTTACTGGTTGTCCC 58.942 38.462 0.00 0.00 33.49 4.46
1946 2269 7.175467 TCGCAGGATGAATGATTTTAGCATATT 59.825 33.333 0.00 0.00 39.69 1.28
3154 3525 8.957466 GTGGAACTAATGGAGCTAAAAAGTTAT 58.043 33.333 0.00 0.00 0.00 1.89
3300 3677 2.032071 GGTAGCGTGCACCCTGTT 59.968 61.111 14.33 0.00 0.00 3.16
3301 3678 2.325082 GGTAGCGTGCACCCTGTTG 61.325 63.158 14.33 0.00 0.00 3.33
3302 3679 1.597027 GTAGCGTGCACCCTGTTGT 60.597 57.895 14.33 0.00 0.00 3.32
3303 3680 1.596752 TAGCGTGCACCCTGTTGTG 60.597 57.895 14.33 0.00 39.29 3.33
3304 3681 3.964875 GCGTGCACCCTGTTGTGG 61.965 66.667 12.15 0.00 36.73 4.17
3305 3682 2.203139 CGTGCACCCTGTTGTGGA 60.203 61.111 12.15 0.00 36.73 4.02
3306 3683 1.600636 CGTGCACCCTGTTGTGGAT 60.601 57.895 12.15 0.00 38.87 3.41
3307 3684 1.855213 CGTGCACCCTGTTGTGGATG 61.855 60.000 12.15 0.00 38.87 3.51
3308 3685 0.823356 GTGCACCCTGTTGTGGATGT 60.823 55.000 5.22 0.00 38.87 3.06
3309 3686 0.822944 TGCACCCTGTTGTGGATGTG 60.823 55.000 0.00 0.00 36.73 3.21
3310 3687 0.537143 GCACCCTGTTGTGGATGTGA 60.537 55.000 0.00 0.00 36.73 3.58
3311 3688 1.887956 GCACCCTGTTGTGGATGTGAT 60.888 52.381 0.00 0.00 36.73 3.06
3312 3689 2.517959 CACCCTGTTGTGGATGTGATT 58.482 47.619 0.00 0.00 32.50 2.57
3313 3690 2.892852 CACCCTGTTGTGGATGTGATTT 59.107 45.455 0.00 0.00 32.50 2.17
3314 3691 2.892852 ACCCTGTTGTGGATGTGATTTG 59.107 45.455 0.00 0.00 0.00 2.32
3315 3692 2.231964 CCCTGTTGTGGATGTGATTTGG 59.768 50.000 0.00 0.00 0.00 3.28
3316 3693 3.156293 CCTGTTGTGGATGTGATTTGGA 58.844 45.455 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.171448 TGAGCCTCCTTATTGAAGCTCC 59.829 50.000 8.66 0.00 44.75 4.70
1 2 3.202097 GTGAGCCTCCTTATTGAAGCTC 58.798 50.000 5.00 5.00 45.40 4.09
2 3 2.573462 TGTGAGCCTCCTTATTGAAGCT 59.427 45.455 0.00 0.00 0.00 3.74
3 4 2.991250 TGTGAGCCTCCTTATTGAAGC 58.009 47.619 0.00 0.00 0.00 3.86
4 5 5.435291 AGATTGTGAGCCTCCTTATTGAAG 58.565 41.667 0.00 0.00 0.00 3.02
5 6 5.441718 AGATTGTGAGCCTCCTTATTGAA 57.558 39.130 0.00 0.00 0.00 2.69
6 7 5.453903 GCTAGATTGTGAGCCTCCTTATTGA 60.454 44.000 0.00 0.00 32.25 2.57
7 8 4.754114 GCTAGATTGTGAGCCTCCTTATTG 59.246 45.833 0.00 0.00 32.25 1.90
8 9 4.502259 CGCTAGATTGTGAGCCTCCTTATT 60.502 45.833 0.00 0.00 35.13 1.40
9 10 3.006323 CGCTAGATTGTGAGCCTCCTTAT 59.994 47.826 0.00 0.00 35.13 1.73
10 11 2.362397 CGCTAGATTGTGAGCCTCCTTA 59.638 50.000 0.00 0.00 35.13 2.69
11 12 1.137872 CGCTAGATTGTGAGCCTCCTT 59.862 52.381 0.00 0.00 35.13 3.36
12 13 0.749649 CGCTAGATTGTGAGCCTCCT 59.250 55.000 0.00 0.00 35.13 3.69
13 14 0.747255 TCGCTAGATTGTGAGCCTCC 59.253 55.000 0.00 0.00 35.13 4.30
14 15 2.468831 CTTCGCTAGATTGTGAGCCTC 58.531 52.381 0.00 0.00 35.13 4.70
15 16 1.472376 GCTTCGCTAGATTGTGAGCCT 60.472 52.381 0.00 0.00 35.13 4.58
16 17 0.933796 GCTTCGCTAGATTGTGAGCC 59.066 55.000 0.00 0.00 35.13 4.70
17 18 1.645034 TGCTTCGCTAGATTGTGAGC 58.355 50.000 0.00 0.00 35.24 4.26
18 19 2.033065 GCATGCTTCGCTAGATTGTGAG 60.033 50.000 11.37 0.00 0.00 3.51
19 20 1.935873 GCATGCTTCGCTAGATTGTGA 59.064 47.619 11.37 0.00 0.00 3.58
20 21 1.667212 TGCATGCTTCGCTAGATTGTG 59.333 47.619 20.33 0.00 0.00 3.33
21 22 2.028420 TGCATGCTTCGCTAGATTGT 57.972 45.000 20.33 0.00 0.00 2.71
22 23 3.620929 AATGCATGCTTCGCTAGATTG 57.379 42.857 20.33 0.00 0.00 2.67
23 24 5.059161 TCTTAATGCATGCTTCGCTAGATT 58.941 37.500 20.33 9.83 0.00 2.40
24 25 4.635223 TCTTAATGCATGCTTCGCTAGAT 58.365 39.130 20.33 0.00 0.00 1.98
25 26 4.058721 TCTTAATGCATGCTTCGCTAGA 57.941 40.909 20.33 10.86 0.00 2.43
26 27 5.354054 AATCTTAATGCATGCTTCGCTAG 57.646 39.130 20.33 8.75 0.00 3.42
27 28 4.084380 CGAATCTTAATGCATGCTTCGCTA 60.084 41.667 20.33 0.00 0.00 4.26
28 29 3.303593 CGAATCTTAATGCATGCTTCGCT 60.304 43.478 20.33 0.09 0.00 4.93
29 30 2.969306 CGAATCTTAATGCATGCTTCGC 59.031 45.455 20.33 0.00 0.00 4.70
30 31 3.548587 CCGAATCTTAATGCATGCTTCG 58.451 45.455 22.00 22.00 35.16 3.79
31 32 3.854784 GCCCGAATCTTAATGCATGCTTC 60.855 47.826 20.33 11.08 0.00 3.86
32 33 2.035066 GCCCGAATCTTAATGCATGCTT 59.965 45.455 20.33 10.16 0.00 3.91
33 34 1.610522 GCCCGAATCTTAATGCATGCT 59.389 47.619 20.33 1.26 0.00 3.79
34 35 1.336240 GGCCCGAATCTTAATGCATGC 60.336 52.381 11.82 11.82 0.00 4.06
35 36 2.030540 CAGGCCCGAATCTTAATGCATG 60.031 50.000 0.00 0.00 0.00 4.06
36 37 2.233271 CAGGCCCGAATCTTAATGCAT 58.767 47.619 0.00 0.00 0.00 3.96
37 38 1.679139 CAGGCCCGAATCTTAATGCA 58.321 50.000 0.00 0.00 0.00 3.96
38 39 0.954452 CCAGGCCCGAATCTTAATGC 59.046 55.000 0.00 0.00 0.00 3.56
39 40 1.609208 CCCAGGCCCGAATCTTAATG 58.391 55.000 0.00 0.00 0.00 1.90
40 41 0.178990 GCCCAGGCCCGAATCTTAAT 60.179 55.000 0.00 0.00 34.56 1.40
41 42 1.226262 GCCCAGGCCCGAATCTTAA 59.774 57.895 0.00 0.00 34.56 1.85
42 43 2.915869 GCCCAGGCCCGAATCTTA 59.084 61.111 0.00 0.00 34.56 2.10
43 44 4.489771 CGCCCAGGCCCGAATCTT 62.490 66.667 0.00 0.00 37.98 2.40
50 51 3.120086 ATACATGACGCCCAGGCCC 62.120 63.158 0.00 0.00 37.98 5.80
51 52 1.893808 CATACATGACGCCCAGGCC 60.894 63.158 0.00 0.00 37.98 5.19
52 53 1.893808 CCATACATGACGCCCAGGC 60.894 63.158 0.00 0.00 37.85 4.85
53 54 1.893808 GCCATACATGACGCCCAGG 60.894 63.158 0.00 0.00 0.00 4.45
54 55 1.146930 AGCCATACATGACGCCCAG 59.853 57.895 0.00 0.00 0.00 4.45
55 56 1.153188 CAGCCATACATGACGCCCA 60.153 57.895 0.00 0.00 0.00 5.36
56 57 1.893808 CCAGCCATACATGACGCCC 60.894 63.158 0.00 0.00 0.00 6.13
57 58 1.893808 CCCAGCCATACATGACGCC 60.894 63.158 0.00 0.00 0.00 5.68
58 59 2.546494 GCCCAGCCATACATGACGC 61.546 63.158 0.00 0.00 0.00 5.19
59 60 3.736483 GCCCAGCCATACATGACG 58.264 61.111 0.00 0.00 0.00 4.35
70 71 4.883354 CCTTCCGGATGGCCCAGC 62.883 72.222 22.35 0.00 34.14 4.85
71 72 3.406595 GACCTTCCGGATGGCCCAG 62.407 68.421 31.05 13.43 34.14 4.45
72 73 3.407967 GACCTTCCGGATGGCCCA 61.408 66.667 31.05 3.56 34.14 5.36
73 74 2.211468 AAAGACCTTCCGGATGGCCC 62.211 60.000 31.05 23.36 34.14 5.80
74 75 0.748367 GAAAGACCTTCCGGATGGCC 60.748 60.000 31.05 23.08 34.14 5.36
75 76 0.253327 AGAAAGACCTTCCGGATGGC 59.747 55.000 31.05 23.63 34.21 4.40
76 77 2.789409 AAGAAAGACCTTCCGGATGG 57.211 50.000 29.87 29.87 34.21 3.51
77 78 2.673368 CGAAAGAAAGACCTTCCGGATG 59.327 50.000 4.15 7.89 34.21 3.51
78 79 2.302157 ACGAAAGAAAGACCTTCCGGAT 59.698 45.455 4.15 0.00 34.21 4.18
79 80 1.690352 ACGAAAGAAAGACCTTCCGGA 59.310 47.619 0.00 0.00 34.21 5.14
80 81 2.067013 GACGAAAGAAAGACCTTCCGG 58.933 52.381 0.00 0.00 34.21 5.14
81 82 2.067013 GGACGAAAGAAAGACCTTCCG 58.933 52.381 0.00 0.00 34.21 4.30
82 83 2.038689 AGGGACGAAAGAAAGACCTTCC 59.961 50.000 0.00 0.00 34.21 3.46
83 84 3.067833 CAGGGACGAAAGAAAGACCTTC 58.932 50.000 0.00 0.00 0.00 3.46
84 85 2.438392 ACAGGGACGAAAGAAAGACCTT 59.562 45.455 0.00 0.00 0.00 3.50
85 86 2.047830 ACAGGGACGAAAGAAAGACCT 58.952 47.619 0.00 0.00 0.00 3.85
86 87 2.545537 ACAGGGACGAAAGAAAGACC 57.454 50.000 0.00 0.00 0.00 3.85
87 88 4.812626 TGTTTACAGGGACGAAAGAAAGAC 59.187 41.667 0.00 0.00 0.00 3.01
88 89 5.026038 TGTTTACAGGGACGAAAGAAAGA 57.974 39.130 0.00 0.00 0.00 2.52
89 90 5.941948 ATGTTTACAGGGACGAAAGAAAG 57.058 39.130 0.00 0.00 0.00 2.62
90 91 5.591067 ACAATGTTTACAGGGACGAAAGAAA 59.409 36.000 0.00 0.00 0.00 2.52
91 92 5.008217 CACAATGTTTACAGGGACGAAAGAA 59.992 40.000 0.00 0.00 0.00 2.52
92 93 4.513692 CACAATGTTTACAGGGACGAAAGA 59.486 41.667 0.00 0.00 0.00 2.52
93 94 4.513692 TCACAATGTTTACAGGGACGAAAG 59.486 41.667 0.00 0.00 0.00 2.62
94 95 4.273969 GTCACAATGTTTACAGGGACGAAA 59.726 41.667 0.00 0.00 0.00 3.46
95 96 3.810941 GTCACAATGTTTACAGGGACGAA 59.189 43.478 0.00 0.00 0.00 3.85
96 97 3.395639 GTCACAATGTTTACAGGGACGA 58.604 45.455 0.00 0.00 0.00 4.20
97 98 2.156891 CGTCACAATGTTTACAGGGACG 59.843 50.000 11.00 11.00 40.45 4.79
98 99 2.482721 CCGTCACAATGTTTACAGGGAC 59.517 50.000 0.00 0.00 0.00 4.46
99 100 2.551287 CCCGTCACAATGTTTACAGGGA 60.551 50.000 14.56 0.00 38.62 4.20
100 101 1.810151 CCCGTCACAATGTTTACAGGG 59.190 52.381 9.43 9.43 0.00 4.45
101 102 2.773487 TCCCGTCACAATGTTTACAGG 58.227 47.619 0.00 0.00 0.00 4.00
102 103 4.000325 TCATCCCGTCACAATGTTTACAG 59.000 43.478 0.00 0.00 0.00 2.74
103 104 4.009370 TCATCCCGTCACAATGTTTACA 57.991 40.909 0.00 0.00 0.00 2.41
104 105 5.560966 ATTCATCCCGTCACAATGTTTAC 57.439 39.130 0.00 0.00 0.00 2.01
105 106 7.627513 GCTTTATTCATCCCGTCACAATGTTTA 60.628 37.037 0.00 0.00 0.00 2.01
106 107 6.582677 TTTATTCATCCCGTCACAATGTTT 57.417 33.333 0.00 0.00 0.00 2.83
107 108 5.393027 GCTTTATTCATCCCGTCACAATGTT 60.393 40.000 0.00 0.00 0.00 2.71
108 109 4.096382 GCTTTATTCATCCCGTCACAATGT 59.904 41.667 0.00 0.00 0.00 2.71
109 110 4.336433 AGCTTTATTCATCCCGTCACAATG 59.664 41.667 0.00 0.00 0.00 2.82
110 111 4.526970 AGCTTTATTCATCCCGTCACAAT 58.473 39.130 0.00 0.00 0.00 2.71
111 112 3.950397 AGCTTTATTCATCCCGTCACAA 58.050 40.909 0.00 0.00 0.00 3.33
112 113 3.627395 AGCTTTATTCATCCCGTCACA 57.373 42.857 0.00 0.00 0.00 3.58
113 114 3.001330 CGAAGCTTTATTCATCCCGTCAC 59.999 47.826 0.00 0.00 0.00 3.67
114 115 3.194861 CGAAGCTTTATTCATCCCGTCA 58.805 45.455 0.00 0.00 0.00 4.35
115 116 3.861569 CGAAGCTTTATTCATCCCGTC 57.138 47.619 0.00 0.00 0.00 4.79
131 132 3.740044 TTTTTAGGCAATCTCGCGAAG 57.260 42.857 11.33 4.62 0.00 3.79
149 150 8.657729 CGGTTTGTGTTTACAAGGTTTTATTTT 58.342 29.630 0.00 0.00 46.63 1.82
150 151 7.201539 GCGGTTTGTGTTTACAAGGTTTTATTT 60.202 33.333 0.00 0.00 46.63 1.40
151 152 6.256104 GCGGTTTGTGTTTACAAGGTTTTATT 59.744 34.615 0.00 0.00 46.63 1.40
152 153 5.749588 GCGGTTTGTGTTTACAAGGTTTTAT 59.250 36.000 0.00 0.00 46.63 1.40
153 154 5.100943 GCGGTTTGTGTTTACAAGGTTTTA 58.899 37.500 0.00 0.00 46.63 1.52
154 155 3.927758 GCGGTTTGTGTTTACAAGGTTTT 59.072 39.130 0.00 0.00 46.63 2.43
155 156 3.513662 GCGGTTTGTGTTTACAAGGTTT 58.486 40.909 0.00 0.00 46.63 3.27
156 157 2.159212 GGCGGTTTGTGTTTACAAGGTT 60.159 45.455 0.00 0.00 46.63 3.50
157 158 1.406180 GGCGGTTTGTGTTTACAAGGT 59.594 47.619 0.00 0.00 46.63 3.50
158 159 1.679153 AGGCGGTTTGTGTTTACAAGG 59.321 47.619 0.00 0.00 46.63 3.61
159 160 2.098443 ACAGGCGGTTTGTGTTTACAAG 59.902 45.455 0.00 0.00 46.63 3.16
160 161 2.093106 ACAGGCGGTTTGTGTTTACAA 58.907 42.857 0.00 0.00 44.66 2.41
161 162 1.402259 CACAGGCGGTTTGTGTTTACA 59.598 47.619 0.00 0.00 40.73 2.41
162 163 2.113910 CACAGGCGGTTTGTGTTTAC 57.886 50.000 0.00 0.00 40.73 2.01
168 169 1.077357 TGGAACACAGGCGGTTTGT 60.077 52.632 0.00 0.00 0.00 2.83
169 170 1.654220 CTGGAACACAGGCGGTTTG 59.346 57.895 0.00 0.00 43.70 2.93
170 171 4.157607 CTGGAACACAGGCGGTTT 57.842 55.556 0.00 0.00 43.70 3.27
178 179 4.651778 ACTAATTAAGCAGCTGGAACACA 58.348 39.130 17.12 0.00 0.00 3.72
179 180 4.938226 AGACTAATTAAGCAGCTGGAACAC 59.062 41.667 17.12 0.00 0.00 3.32
180 181 5.165961 AGACTAATTAAGCAGCTGGAACA 57.834 39.130 17.12 0.00 0.00 3.18
181 182 5.643777 TGAAGACTAATTAAGCAGCTGGAAC 59.356 40.000 17.12 0.00 0.00 3.62
182 183 5.804639 TGAAGACTAATTAAGCAGCTGGAA 58.195 37.500 17.12 0.00 0.00 3.53
183 184 5.420725 TGAAGACTAATTAAGCAGCTGGA 57.579 39.130 17.12 0.00 0.00 3.86
184 185 5.645497 AGTTGAAGACTAATTAAGCAGCTGG 59.355 40.000 17.12 0.00 36.65 4.85
185 186 6.454848 CGAGTTGAAGACTAATTAAGCAGCTG 60.455 42.308 10.11 10.11 39.19 4.24
186 187 5.578727 CGAGTTGAAGACTAATTAAGCAGCT 59.421 40.000 0.00 0.00 39.19 4.24
187 188 5.220491 CCGAGTTGAAGACTAATTAAGCAGC 60.220 44.000 0.00 0.00 39.19 5.25
188 189 5.220491 GCCGAGTTGAAGACTAATTAAGCAG 60.220 44.000 0.00 0.00 39.19 4.24
189 190 4.630069 GCCGAGTTGAAGACTAATTAAGCA 59.370 41.667 0.00 0.00 39.19 3.91
190 191 4.259850 CGCCGAGTTGAAGACTAATTAAGC 60.260 45.833 0.00 0.00 39.19 3.09
191 192 4.863131 ACGCCGAGTTGAAGACTAATTAAG 59.137 41.667 0.00 0.00 39.19 1.85
192 193 4.813027 ACGCCGAGTTGAAGACTAATTAA 58.187 39.130 0.00 0.00 39.19 1.40
193 194 4.445452 ACGCCGAGTTGAAGACTAATTA 57.555 40.909 0.00 0.00 39.19 1.40
194 195 3.314541 ACGCCGAGTTGAAGACTAATT 57.685 42.857 0.00 0.00 39.19 1.40
195 196 3.314541 AACGCCGAGTTGAAGACTAAT 57.685 42.857 0.00 0.00 42.39 1.73
196 197 2.806608 AACGCCGAGTTGAAGACTAA 57.193 45.000 0.00 0.00 42.39 2.24
197 198 3.181493 GGATAACGCCGAGTTGAAGACTA 60.181 47.826 0.00 0.00 44.01 2.59
198 199 2.416972 GGATAACGCCGAGTTGAAGACT 60.417 50.000 0.00 0.00 44.01 3.24
199 200 1.925185 GGATAACGCCGAGTTGAAGAC 59.075 52.381 0.00 0.00 44.01 3.01
200 201 2.288961 GGATAACGCCGAGTTGAAGA 57.711 50.000 0.00 0.00 44.01 2.87
240 241 0.951040 CGGGAGTGTTCTGTTGGCTC 60.951 60.000 0.00 0.00 0.00 4.70
241 242 1.071471 CGGGAGTGTTCTGTTGGCT 59.929 57.895 0.00 0.00 0.00 4.75
242 243 1.966451 CCGGGAGTGTTCTGTTGGC 60.966 63.158 0.00 0.00 0.00 4.52
243 244 1.966451 GCCGGGAGTGTTCTGTTGG 60.966 63.158 2.18 0.00 0.00 3.77
244 245 1.966451 GGCCGGGAGTGTTCTGTTG 60.966 63.158 2.18 0.00 0.00 3.33
245 246 2.430367 GGCCGGGAGTGTTCTGTT 59.570 61.111 2.18 0.00 0.00 3.16
246 247 4.003788 CGGCCGGGAGTGTTCTGT 62.004 66.667 20.10 0.00 0.00 3.41
247 248 1.956629 ATACGGCCGGGAGTGTTCTG 61.957 60.000 31.76 0.00 0.00 3.02
248 249 1.684734 ATACGGCCGGGAGTGTTCT 60.685 57.895 31.76 7.29 0.00 3.01
249 250 1.520787 CATACGGCCGGGAGTGTTC 60.521 63.158 31.76 0.00 0.00 3.18
250 251 1.833787 AACATACGGCCGGGAGTGTT 61.834 55.000 31.76 27.12 0.00 3.32
251 252 2.234913 GAACATACGGCCGGGAGTGT 62.235 60.000 31.76 23.28 0.00 3.55
252 253 1.520787 GAACATACGGCCGGGAGTG 60.521 63.158 31.76 22.63 0.00 3.51
253 254 2.728435 GGAACATACGGCCGGGAGT 61.728 63.158 31.76 20.89 0.00 3.85
254 255 1.968050 AAGGAACATACGGCCGGGAG 61.968 60.000 31.76 20.18 0.00 4.30
255 256 1.963464 GAAGGAACATACGGCCGGGA 61.963 60.000 31.76 18.02 0.00 5.14
256 257 1.523032 GAAGGAACATACGGCCGGG 60.523 63.158 31.76 20.64 0.00 5.73
257 258 1.523032 GGAAGGAACATACGGCCGG 60.523 63.158 31.76 14.78 0.00 6.13
258 259 1.523032 GGGAAGGAACATACGGCCG 60.523 63.158 26.86 26.86 0.00 6.13
259 260 1.153025 GGGGAAGGAACATACGGCC 60.153 63.158 0.00 0.00 0.00 6.13
260 261 1.523032 CGGGGAAGGAACATACGGC 60.523 63.158 0.00 0.00 0.00 5.68
261 262 0.104304 CTCGGGGAAGGAACATACGG 59.896 60.000 0.00 0.00 0.00 4.02
265 266 1.123928 CTAGCTCGGGGAAGGAACAT 58.876 55.000 0.00 0.00 0.00 2.71
274 275 1.333177 AAGATGTAGCTAGCTCGGGG 58.667 55.000 23.26 0.00 0.00 5.73
304 305 2.279252 GTCGACATACGCCGCCAT 60.279 61.111 11.55 0.00 42.26 4.40
307 308 2.585869 CCATGTCGACATACGCCGC 61.586 63.158 29.52 0.00 42.26 6.53
315 316 0.544357 AGAGGGGTTCCATGTCGACA 60.544 55.000 22.48 22.48 34.83 4.35
318 319 3.560636 AAATAGAGGGGTTCCATGTCG 57.439 47.619 0.00 0.00 34.83 4.35
319 320 6.187727 TCATAAATAGAGGGGTTCCATGTC 57.812 41.667 0.00 0.00 34.83 3.06
320 321 6.590656 TTCATAAATAGAGGGGTTCCATGT 57.409 37.500 0.00 0.00 34.83 3.21
321 322 7.201911 GGTTTTCATAAATAGAGGGGTTCCATG 60.202 40.741 0.00 0.00 34.83 3.66
322 323 6.839134 GGTTTTCATAAATAGAGGGGTTCCAT 59.161 38.462 0.00 0.00 34.83 3.41
323 324 6.011096 AGGTTTTCATAAATAGAGGGGTTCCA 60.011 38.462 0.00 0.00 34.83 3.53
324 325 6.432581 AGGTTTTCATAAATAGAGGGGTTCC 58.567 40.000 0.00 0.00 0.00 3.62
325 326 9.642343 AATAGGTTTTCATAAATAGAGGGGTTC 57.358 33.333 0.00 0.00 0.00 3.62
326 327 9.642343 GAATAGGTTTTCATAAATAGAGGGGTT 57.358 33.333 0.00 0.00 0.00 4.11
327 328 7.937394 CGAATAGGTTTTCATAAATAGAGGGGT 59.063 37.037 0.00 0.00 0.00 4.95
328 329 7.937394 ACGAATAGGTTTTCATAAATAGAGGGG 59.063 37.037 0.00 0.00 0.00 4.79
329 330 8.904099 ACGAATAGGTTTTCATAAATAGAGGG 57.096 34.615 0.00 0.00 0.00 4.30
403 404 9.506018 AGAGCAAACCTTATTTTTAAATGCAAT 57.494 25.926 0.00 0.00 0.00 3.56
404 405 8.900983 AGAGCAAACCTTATTTTTAAATGCAA 57.099 26.923 0.00 0.00 0.00 4.08
405 406 8.900983 AAGAGCAAACCTTATTTTTAAATGCA 57.099 26.923 7.23 0.00 0.00 3.96
410 411 9.892130 TGGAAAAAGAGCAAACCTTATTTTTAA 57.108 25.926 0.00 0.00 35.06 1.52
411 412 9.892130 TTGGAAAAAGAGCAAACCTTATTTTTA 57.108 25.926 0.00 0.00 35.06 1.52
412 413 8.800370 TTGGAAAAAGAGCAAACCTTATTTTT 57.200 26.923 0.00 0.00 36.37 1.94
413 414 8.800370 TTTGGAAAAAGAGCAAACCTTATTTT 57.200 26.923 0.00 0.00 0.00 1.82
414 415 8.800370 TTTTGGAAAAAGAGCAAACCTTATTT 57.200 26.923 0.00 0.00 0.00 1.40
415 416 8.800370 TTTTTGGAAAAAGAGCAAACCTTATT 57.200 26.923 0.00 0.00 33.29 1.40
478 479 8.907222 AATATTTGTGAAATGTGAGCCTTTTT 57.093 26.923 0.00 0.00 32.38 1.94
479 480 8.907222 AAATATTTGTGAAATGTGAGCCTTTT 57.093 26.923 0.00 0.00 32.38 2.27
480 481 8.907222 AAAATATTTGTGAAATGTGAGCCTTT 57.093 26.923 0.39 0.00 32.38 3.11
481 482 8.907222 AAAAATATTTGTGAAATGTGAGCCTT 57.093 26.923 0.39 0.00 32.38 4.35
482 483 7.603784 GGAAAAATATTTGTGAAATGTGAGCCT 59.396 33.333 0.39 0.00 32.38 4.58
483 484 7.387397 TGGAAAAATATTTGTGAAATGTGAGCC 59.613 33.333 0.39 0.00 32.38 4.70
484 485 8.309163 TGGAAAAATATTTGTGAAATGTGAGC 57.691 30.769 0.39 0.00 32.38 4.26
501 502 9.908152 CTTACTCGGTTTAGAAAATGGAAAAAT 57.092 29.630 0.00 0.00 0.00 1.82
502 503 9.122779 TCTTACTCGGTTTAGAAAATGGAAAAA 57.877 29.630 0.00 0.00 0.00 1.94
503 504 8.680039 TCTTACTCGGTTTAGAAAATGGAAAA 57.320 30.769 0.00 0.00 0.00 2.29
504 505 8.680039 TTCTTACTCGGTTTAGAAAATGGAAA 57.320 30.769 0.00 0.00 0.00 3.13
505 506 8.680039 TTTCTTACTCGGTTTAGAAAATGGAA 57.320 30.769 0.00 0.00 34.63 3.53
506 507 8.857694 ATTTCTTACTCGGTTTAGAAAATGGA 57.142 30.769 0.00 0.00 39.32 3.41
507 508 8.726988 TGATTTCTTACTCGGTTTAGAAAATGG 58.273 33.333 0.00 0.00 39.32 3.16
508 509 9.760660 CTGATTTCTTACTCGGTTTAGAAAATG 57.239 33.333 0.00 0.00 39.32 2.32
509 510 8.451748 GCTGATTTCTTACTCGGTTTAGAAAAT 58.548 33.333 0.00 0.00 39.32 1.82
510 511 7.094933 GGCTGATTTCTTACTCGGTTTAGAAAA 60.095 37.037 0.00 0.00 39.32 2.29
511 512 6.370718 GGCTGATTTCTTACTCGGTTTAGAAA 59.629 38.462 0.00 0.00 39.93 2.52
512 513 5.873164 GGCTGATTTCTTACTCGGTTTAGAA 59.127 40.000 0.00 0.00 0.00 2.10
513 514 5.046878 TGGCTGATTTCTTACTCGGTTTAGA 60.047 40.000 0.00 0.00 0.00 2.10
514 515 5.175859 TGGCTGATTTCTTACTCGGTTTAG 58.824 41.667 0.00 0.00 0.00 1.85
515 516 5.046878 TCTGGCTGATTTCTTACTCGGTTTA 60.047 40.000 0.00 0.00 0.00 2.01
516 517 4.003648 CTGGCTGATTTCTTACTCGGTTT 58.996 43.478 0.00 0.00 0.00 3.27
517 518 3.260884 TCTGGCTGATTTCTTACTCGGTT 59.739 43.478 0.00 0.00 0.00 4.44
518 519 2.832129 TCTGGCTGATTTCTTACTCGGT 59.168 45.455 0.00 0.00 0.00 4.69
519 520 3.526931 TCTGGCTGATTTCTTACTCGG 57.473 47.619 0.00 0.00 0.00 4.63
520 521 5.862924 TTTTCTGGCTGATTTCTTACTCG 57.137 39.130 0.00 0.00 0.00 4.18
521 522 7.301789 GTCTTTTTCTGGCTGATTTCTTACTC 58.698 38.462 0.00 0.00 0.00 2.59
522 523 6.073003 CGTCTTTTTCTGGCTGATTTCTTACT 60.073 38.462 0.00 0.00 0.00 2.24
523 524 6.080406 CGTCTTTTTCTGGCTGATTTCTTAC 58.920 40.000 0.00 0.00 0.00 2.34
524 525 5.334879 GCGTCTTTTTCTGGCTGATTTCTTA 60.335 40.000 0.00 0.00 0.00 2.10
525 526 4.557496 GCGTCTTTTTCTGGCTGATTTCTT 60.557 41.667 0.00 0.00 0.00 2.52
526 527 3.057946 GCGTCTTTTTCTGGCTGATTTCT 60.058 43.478 0.00 0.00 0.00 2.52
527 528 3.057946 AGCGTCTTTTTCTGGCTGATTTC 60.058 43.478 0.00 0.00 31.74 2.17
528 529 2.887152 AGCGTCTTTTTCTGGCTGATTT 59.113 40.909 0.00 0.00 31.74 2.17
529 530 2.485814 GAGCGTCTTTTTCTGGCTGATT 59.514 45.455 0.00 0.00 33.40 2.57
530 531 2.079925 GAGCGTCTTTTTCTGGCTGAT 58.920 47.619 0.00 0.00 33.40 2.90
531 532 1.512926 GAGCGTCTTTTTCTGGCTGA 58.487 50.000 0.00 0.00 33.40 4.26
532 533 0.164647 CGAGCGTCTTTTTCTGGCTG 59.835 55.000 0.00 0.00 33.40 4.85
533 534 1.569479 GCGAGCGTCTTTTTCTGGCT 61.569 55.000 0.00 0.00 36.51 4.75
534 535 1.154395 GCGAGCGTCTTTTTCTGGC 60.154 57.895 0.00 0.00 0.00 4.85
535 536 1.497722 GGCGAGCGTCTTTTTCTGG 59.502 57.895 0.00 0.00 0.00 3.86
536 537 1.227999 TGGGCGAGCGTCTTTTTCTG 61.228 55.000 0.00 0.00 0.00 3.02
537 538 0.534203 TTGGGCGAGCGTCTTTTTCT 60.534 50.000 0.00 0.00 0.00 2.52
538 539 0.110192 CTTGGGCGAGCGTCTTTTTC 60.110 55.000 0.00 0.00 0.00 2.29
539 540 1.949257 CTTGGGCGAGCGTCTTTTT 59.051 52.632 0.00 0.00 0.00 1.94
540 541 2.617274 GCTTGGGCGAGCGTCTTTT 61.617 57.895 0.00 0.00 32.23 2.27
541 542 3.050275 GCTTGGGCGAGCGTCTTT 61.050 61.111 0.00 0.00 32.23 2.52
551 552 3.262448 TAGTGAACCGGGCTTGGGC 62.262 63.158 6.32 0.00 37.82 5.36
552 553 1.376812 GTAGTGAACCGGGCTTGGG 60.377 63.158 6.32 0.00 0.00 4.12
553 554 0.673644 CTGTAGTGAACCGGGCTTGG 60.674 60.000 6.32 0.00 0.00 3.61
554 555 0.034896 ACTGTAGTGAACCGGGCTTG 59.965 55.000 6.32 0.00 0.00 4.01
555 556 2.448749 ACTGTAGTGAACCGGGCTT 58.551 52.632 6.32 0.00 0.00 4.35
556 557 4.210158 ACTGTAGTGAACCGGGCT 57.790 55.556 6.32 0.39 0.00 5.19
558 559 0.949105 GTGCACTGTAGTGAACCGGG 60.949 60.000 15.78 0.00 46.51 5.73
559 560 2.528797 GTGCACTGTAGTGAACCGG 58.471 57.895 15.78 0.00 46.51 5.28
566 567 3.832490 TCATAGAACCAGTGCACTGTAGT 59.168 43.478 37.55 28.44 42.27 2.73
567 568 4.456280 TCATAGAACCAGTGCACTGTAG 57.544 45.455 37.55 27.84 42.27 2.74
568 569 4.383010 CCATCATAGAACCAGTGCACTGTA 60.383 45.833 37.55 26.23 42.27 2.74
569 570 3.603532 CATCATAGAACCAGTGCACTGT 58.396 45.455 37.55 24.98 42.27 3.55
570 571 2.941064 CCATCATAGAACCAGTGCACTG 59.059 50.000 35.15 35.15 43.40 3.66
571 572 2.092753 CCCATCATAGAACCAGTGCACT 60.093 50.000 15.25 15.25 0.00 4.40
572 573 2.292267 CCCATCATAGAACCAGTGCAC 58.708 52.381 9.40 9.40 0.00 4.57
573 574 1.408683 GCCCATCATAGAACCAGTGCA 60.409 52.381 0.00 0.00 0.00 4.57
574 575 1.133976 AGCCCATCATAGAACCAGTGC 60.134 52.381 0.00 0.00 0.00 4.40
575 576 3.805108 GCTAGCCCATCATAGAACCAGTG 60.805 52.174 2.29 0.00 0.00 3.66
576 577 2.370189 GCTAGCCCATCATAGAACCAGT 59.630 50.000 2.29 0.00 0.00 4.00
577 578 2.611473 CGCTAGCCCATCATAGAACCAG 60.611 54.545 9.66 0.00 0.00 4.00
578 579 1.344438 CGCTAGCCCATCATAGAACCA 59.656 52.381 9.66 0.00 0.00 3.67
579 580 1.941668 GCGCTAGCCCATCATAGAACC 60.942 57.143 9.66 0.00 37.42 3.62
580 581 1.270305 TGCGCTAGCCCATCATAGAAC 60.270 52.381 9.73 0.00 44.33 3.01
581 582 1.001293 CTGCGCTAGCCCATCATAGAA 59.999 52.381 9.73 0.00 44.33 2.10
582 583 0.605083 CTGCGCTAGCCCATCATAGA 59.395 55.000 9.73 0.00 44.33 1.98
583 584 0.319728 ACTGCGCTAGCCCATCATAG 59.680 55.000 9.73 0.00 44.33 2.23
584 585 0.758734 AACTGCGCTAGCCCATCATA 59.241 50.000 9.73 0.00 44.33 2.15
585 586 0.107017 AAACTGCGCTAGCCCATCAT 60.107 50.000 9.73 0.00 44.33 2.45
586 587 0.322456 AAAACTGCGCTAGCCCATCA 60.322 50.000 9.73 1.41 44.33 3.07
587 588 0.811281 AAAAACTGCGCTAGCCCATC 59.189 50.000 9.73 0.00 44.33 3.51
588 589 2.961424 AAAAACTGCGCTAGCCCAT 58.039 47.368 9.73 0.00 44.33 4.00
589 590 4.492604 AAAAACTGCGCTAGCCCA 57.507 50.000 9.73 5.36 44.33 5.36
611 612 3.367395 GGCTAGCCCATGTTTCTCAAAAC 60.367 47.826 24.19 0.00 44.18 2.43
612 613 2.825532 GGCTAGCCCATGTTTCTCAAAA 59.174 45.455 24.19 0.00 0.00 2.44
613 614 2.446435 GGCTAGCCCATGTTTCTCAAA 58.554 47.619 24.19 0.00 0.00 2.69
614 615 2.128771 GGCTAGCCCATGTTTCTCAA 57.871 50.000 24.19 0.00 0.00 3.02
615 616 3.882131 GGCTAGCCCATGTTTCTCA 57.118 52.632 24.19 0.00 0.00 3.27
626 627 0.749454 CACATCCAACTGGGCTAGCC 60.749 60.000 26.55 26.55 36.21 3.93
627 628 0.035056 ACACATCCAACTGGGCTAGC 60.035 55.000 6.04 6.04 36.21 3.42
628 629 1.742761 CACACATCCAACTGGGCTAG 58.257 55.000 0.00 0.00 36.21 3.42
629 630 0.322456 GCACACATCCAACTGGGCTA 60.322 55.000 0.00 0.00 36.21 3.93
630 631 1.604593 GCACACATCCAACTGGGCT 60.605 57.895 0.00 0.00 36.21 5.19
631 632 2.639327 GGCACACATCCAACTGGGC 61.639 63.158 0.00 0.00 36.21 5.36
632 633 2.334946 CGGCACACATCCAACTGGG 61.335 63.158 0.00 0.00 35.41 4.45
633 634 1.600636 ACGGCACACATCCAACTGG 60.601 57.895 0.00 0.00 0.00 4.00
634 635 1.575922 CACGGCACACATCCAACTG 59.424 57.895 0.00 0.00 0.00 3.16
635 636 2.260869 GCACGGCACACATCCAACT 61.261 57.895 0.00 0.00 0.00 3.16
636 637 2.255252 GCACGGCACACATCCAAC 59.745 61.111 0.00 0.00 0.00 3.77
637 638 3.353029 CGCACGGCACACATCCAA 61.353 61.111 0.00 0.00 0.00 3.53
638 639 3.816367 TTCGCACGGCACACATCCA 62.816 57.895 0.00 0.00 0.00 3.41
639 640 3.027170 CTTCGCACGGCACACATCC 62.027 63.158 0.00 0.00 0.00 3.51
640 641 2.476051 CTTCGCACGGCACACATC 59.524 61.111 0.00 0.00 0.00 3.06
641 642 3.726517 GCTTCGCACGGCACACAT 61.727 61.111 0.00 0.00 0.00 3.21
653 654 2.604174 AAAACTGTCGGGCGCTTCG 61.604 57.895 7.64 12.48 0.00 3.79
654 655 1.082104 CAAAACTGTCGGGCGCTTC 60.082 57.895 7.64 0.00 0.00 3.86
655 656 1.525077 TCAAAACTGTCGGGCGCTT 60.525 52.632 7.64 0.00 0.00 4.68
656 657 2.110213 TCAAAACTGTCGGGCGCT 59.890 55.556 7.64 0.00 0.00 5.92
657 658 2.251371 GTCAAAACTGTCGGGCGC 59.749 61.111 0.00 0.00 0.00 6.53
658 659 2.549282 CGTCAAAACTGTCGGGCG 59.451 61.111 0.00 0.00 0.00 6.13
659 660 1.161563 TTCCGTCAAAACTGTCGGGC 61.162 55.000 10.17 0.00 42.71 6.13
660 661 0.584876 GTTCCGTCAAAACTGTCGGG 59.415 55.000 10.17 0.00 42.71 5.14
661 662 1.260561 CTGTTCCGTCAAAACTGTCGG 59.739 52.381 4.71 4.71 43.65 4.79
662 663 1.931172 ACTGTTCCGTCAAAACTGTCG 59.069 47.619 0.00 0.00 34.84 4.35
663 664 4.351131 AAACTGTTCCGTCAAAACTGTC 57.649 40.909 0.00 0.00 37.68 3.51
664 665 4.776795 AAAACTGTTCCGTCAAAACTGT 57.223 36.364 0.00 0.00 39.53 3.55
686 687 1.134560 CCGTCAAAACCCCGTCAAAAA 59.865 47.619 0.00 0.00 0.00 1.94
687 688 0.739561 CCGTCAAAACCCCGTCAAAA 59.260 50.000 0.00 0.00 0.00 2.44
688 689 0.107312 TCCGTCAAAACCCCGTCAAA 60.107 50.000 0.00 0.00 0.00 2.69
689 690 0.107312 TTCCGTCAAAACCCCGTCAA 60.107 50.000 0.00 0.00 0.00 3.18
690 691 0.814812 GTTCCGTCAAAACCCCGTCA 60.815 55.000 0.00 0.00 0.00 4.35
691 692 0.814812 TGTTCCGTCAAAACCCCGTC 60.815 55.000 0.00 0.00 0.00 4.79
692 693 0.816421 CTGTTCCGTCAAAACCCCGT 60.816 55.000 0.00 0.00 0.00 5.28
693 694 0.816421 ACTGTTCCGTCAAAACCCCG 60.816 55.000 0.00 0.00 0.00 5.73
694 695 1.395635 AACTGTTCCGTCAAAACCCC 58.604 50.000 0.00 0.00 0.00 4.95
695 696 2.164827 ACAAACTGTTCCGTCAAAACCC 59.835 45.455 0.00 0.00 0.00 4.11
696 697 3.119779 TCACAAACTGTTCCGTCAAAACC 60.120 43.478 0.00 0.00 0.00 3.27
697 698 4.086199 TCACAAACTGTTCCGTCAAAAC 57.914 40.909 0.00 0.00 0.00 2.43
698 699 3.127895 CCTCACAAACTGTTCCGTCAAAA 59.872 43.478 0.00 0.00 0.00 2.44
699 700 2.680841 CCTCACAAACTGTTCCGTCAAA 59.319 45.455 0.00 0.00 0.00 2.69
700 701 2.285083 CCTCACAAACTGTTCCGTCAA 58.715 47.619 0.00 0.00 0.00 3.18
701 702 1.474320 CCCTCACAAACTGTTCCGTCA 60.474 52.381 0.00 0.00 0.00 4.35
702 703 1.226746 CCCTCACAAACTGTTCCGTC 58.773 55.000 0.00 0.00 0.00 4.79
703 704 0.818040 GCCCTCACAAACTGTTCCGT 60.818 55.000 0.00 0.00 0.00 4.69
704 705 1.515521 GGCCCTCACAAACTGTTCCG 61.516 60.000 0.00 0.00 0.00 4.30
705 706 1.515521 CGGCCCTCACAAACTGTTCC 61.516 60.000 0.00 0.00 0.00 3.62
706 707 0.818040 ACGGCCCTCACAAACTGTTC 60.818 55.000 0.00 0.00 0.00 3.18
707 708 0.395173 AACGGCCCTCACAAACTGTT 60.395 50.000 0.00 0.00 0.00 3.16
708 709 1.101049 CAACGGCCCTCACAAACTGT 61.101 55.000 0.00 0.00 0.00 3.55
709 710 1.654220 CAACGGCCCTCACAAACTG 59.346 57.895 0.00 0.00 0.00 3.16
710 711 1.528309 CCAACGGCCCTCACAAACT 60.528 57.895 0.00 0.00 0.00 2.66
711 712 1.104577 TTCCAACGGCCCTCACAAAC 61.105 55.000 0.00 0.00 0.00 2.93
712 713 0.178975 ATTCCAACGGCCCTCACAAA 60.179 50.000 0.00 0.00 0.00 2.83
713 714 0.608035 GATTCCAACGGCCCTCACAA 60.608 55.000 0.00 0.00 0.00 3.33
714 715 1.002624 GATTCCAACGGCCCTCACA 60.003 57.895 0.00 0.00 0.00 3.58
715 716 2.106683 CGATTCCAACGGCCCTCAC 61.107 63.158 0.00 0.00 0.00 3.51
716 717 1.622607 ATCGATTCCAACGGCCCTCA 61.623 55.000 0.00 0.00 0.00 3.86
717 718 0.880718 GATCGATTCCAACGGCCCTC 60.881 60.000 0.00 0.00 0.00 4.30
718 719 1.146263 GATCGATTCCAACGGCCCT 59.854 57.895 0.00 0.00 0.00 5.19
719 720 1.153249 TGATCGATTCCAACGGCCC 60.153 57.895 0.00 0.00 0.00 5.80
720 721 1.762222 CGTGATCGATTCCAACGGCC 61.762 60.000 0.00 0.00 39.71 6.13
721 722 1.082117 ACGTGATCGATTCCAACGGC 61.082 55.000 20.40 0.54 40.62 5.68
722 723 1.060553 CAACGTGATCGATTCCAACGG 59.939 52.381 20.40 7.05 40.62 4.44
723 724 1.724623 ACAACGTGATCGATTCCAACG 59.275 47.619 16.98 16.98 40.62 4.10
724 725 2.993899 AGACAACGTGATCGATTCCAAC 59.006 45.455 0.00 0.00 40.62 3.77
725 726 3.313012 AGACAACGTGATCGATTCCAA 57.687 42.857 0.00 0.00 40.62 3.53
726 727 3.729762 CGTAGACAACGTGATCGATTCCA 60.730 47.826 0.00 0.00 46.72 3.53
727 728 2.782192 CGTAGACAACGTGATCGATTCC 59.218 50.000 0.00 0.00 46.72 3.01
739 740 1.513586 CGAGCCGGACGTAGACAAC 60.514 63.158 5.05 0.00 0.00 3.32
740 741 2.872557 CGAGCCGGACGTAGACAA 59.127 61.111 5.05 0.00 0.00 3.18
751 752 1.392710 ATGGGTTCTAGTCCGAGCCG 61.393 60.000 0.00 0.00 35.37 5.52
752 753 0.389757 GATGGGTTCTAGTCCGAGCC 59.610 60.000 0.00 0.00 33.95 4.70
753 754 1.112113 TGATGGGTTCTAGTCCGAGC 58.888 55.000 0.00 0.00 0.00 5.03
754 755 1.409427 GGTGATGGGTTCTAGTCCGAG 59.591 57.143 0.00 0.00 0.00 4.63
755 756 1.481871 GGTGATGGGTTCTAGTCCGA 58.518 55.000 0.00 0.00 0.00 4.55
756 757 0.102481 CGGTGATGGGTTCTAGTCCG 59.898 60.000 0.00 0.00 0.00 4.79
757 758 1.481871 TCGGTGATGGGTTCTAGTCC 58.518 55.000 0.00 0.00 0.00 3.85
758 759 3.821421 AATCGGTGATGGGTTCTAGTC 57.179 47.619 0.00 0.00 0.00 2.59
759 760 5.888982 AATAATCGGTGATGGGTTCTAGT 57.111 39.130 0.00 0.00 0.00 2.57
760 761 6.994221 ACTAATAATCGGTGATGGGTTCTAG 58.006 40.000 0.00 0.00 0.00 2.43
761 762 6.989155 ACTAATAATCGGTGATGGGTTCTA 57.011 37.500 0.00 0.00 0.00 2.10
762 763 5.888982 ACTAATAATCGGTGATGGGTTCT 57.111 39.130 0.00 0.00 0.00 3.01
763 764 9.886132 AATATACTAATAATCGGTGATGGGTTC 57.114 33.333 0.00 0.00 0.00 3.62
764 765 9.667107 CAATATACTAATAATCGGTGATGGGTT 57.333 33.333 0.00 0.00 0.00 4.11
765 766 8.822805 ACAATATACTAATAATCGGTGATGGGT 58.177 33.333 0.00 0.00 0.00 4.51
766 767 9.314321 GACAATATACTAATAATCGGTGATGGG 57.686 37.037 0.00 0.00 0.00 4.00
767 768 9.314321 GGACAATATACTAATAATCGGTGATGG 57.686 37.037 0.00 0.00 0.00 3.51
770 771 9.304335 TCAGGACAATATACTAATAATCGGTGA 57.696 33.333 0.00 0.00 0.00 4.02
771 772 9.923143 TTCAGGACAATATACTAATAATCGGTG 57.077 33.333 0.00 0.00 0.00 4.94
789 790 9.449719 GGAGTAATAATCTTTTTCTTCAGGACA 57.550 33.333 0.00 0.00 0.00 4.02
790 791 9.674068 AGGAGTAATAATCTTTTTCTTCAGGAC 57.326 33.333 0.00 0.00 0.00 3.85
829 830 8.993424 ACAAGGAGATACATATTACAAGTCCTT 58.007 33.333 0.00 0.00 41.54 3.36
830 831 8.554490 ACAAGGAGATACATATTACAAGTCCT 57.446 34.615 0.00 0.00 33.19 3.85
839 840 8.889717 CGGTTTGTTTACAAGGAGATACATATT 58.110 33.333 0.00 0.00 37.15 1.28
840 841 8.044908 ACGGTTTGTTTACAAGGAGATACATAT 58.955 33.333 0.00 0.00 37.15 1.78
841 842 7.332430 CACGGTTTGTTTACAAGGAGATACATA 59.668 37.037 0.00 0.00 37.15 2.29
842 843 6.148811 CACGGTTTGTTTACAAGGAGATACAT 59.851 38.462 0.00 0.00 37.15 2.29
843 844 5.467399 CACGGTTTGTTTACAAGGAGATACA 59.533 40.000 0.00 0.00 37.15 2.29
844 845 5.697633 TCACGGTTTGTTTACAAGGAGATAC 59.302 40.000 0.00 0.00 37.15 2.24
845 846 5.856156 TCACGGTTTGTTTACAAGGAGATA 58.144 37.500 0.00 0.00 37.15 1.98
846 847 4.710324 TCACGGTTTGTTTACAAGGAGAT 58.290 39.130 0.00 0.00 37.15 2.75
847 848 4.139859 TCACGGTTTGTTTACAAGGAGA 57.860 40.909 0.00 0.00 37.15 3.71
848 849 4.886247 TTCACGGTTTGTTTACAAGGAG 57.114 40.909 0.00 0.00 37.15 3.69
849 850 5.415077 TCTTTTCACGGTTTGTTTACAAGGA 59.585 36.000 0.00 0.00 37.15 3.36
850 851 5.642686 TCTTTTCACGGTTTGTTTACAAGG 58.357 37.500 0.00 0.00 37.15 3.61
851 852 6.548171 TCTCTTTTCACGGTTTGTTTACAAG 58.452 36.000 0.00 0.00 37.15 3.16
852 853 6.497785 TCTCTTTTCACGGTTTGTTTACAA 57.502 33.333 0.00 0.00 0.00 2.41
853 854 6.316640 TGATCTCTTTTCACGGTTTGTTTACA 59.683 34.615 0.00 0.00 0.00 2.41
854 855 6.721321 TGATCTCTTTTCACGGTTTGTTTAC 58.279 36.000 0.00 0.00 0.00 2.01
855 856 6.928979 TGATCTCTTTTCACGGTTTGTTTA 57.071 33.333 0.00 0.00 0.00 2.01
856 857 5.828299 TGATCTCTTTTCACGGTTTGTTT 57.172 34.783 0.00 0.00 0.00 2.83
857 858 5.828299 TTGATCTCTTTTCACGGTTTGTT 57.172 34.783 0.00 0.00 0.00 2.83
858 859 5.588648 TCTTTGATCTCTTTTCACGGTTTGT 59.411 36.000 0.00 0.00 0.00 2.83
859 860 6.060028 TCTTTGATCTCTTTTCACGGTTTG 57.940 37.500 0.00 0.00 0.00 2.93
860 861 6.542370 TCTTCTTTGATCTCTTTTCACGGTTT 59.458 34.615 0.00 0.00 0.00 3.27
861 862 6.055588 TCTTCTTTGATCTCTTTTCACGGTT 58.944 36.000 0.00 0.00 0.00 4.44
862 863 5.611374 TCTTCTTTGATCTCTTTTCACGGT 58.389 37.500 0.00 0.00 0.00 4.83
863 864 6.545504 TTCTTCTTTGATCTCTTTTCACGG 57.454 37.500 0.00 0.00 0.00 4.94
887 888 9.282569 ACGCAGCTAGTAGTAGTAGTATTTTAT 57.717 33.333 12.61 0.00 0.00 1.40
888 889 8.554528 CACGCAGCTAGTAGTAGTAGTATTTTA 58.445 37.037 12.61 0.00 0.00 1.52
889 890 7.416022 CACGCAGCTAGTAGTAGTAGTATTTT 58.584 38.462 12.61 0.00 0.00 1.82
890 891 6.513066 GCACGCAGCTAGTAGTAGTAGTATTT 60.513 42.308 12.61 0.00 41.15 1.40
891 892 5.049543 GCACGCAGCTAGTAGTAGTAGTATT 60.050 44.000 12.61 0.00 41.15 1.89
892 893 4.451774 GCACGCAGCTAGTAGTAGTAGTAT 59.548 45.833 12.61 1.14 41.15 2.12
893 894 3.806521 GCACGCAGCTAGTAGTAGTAGTA 59.193 47.826 12.61 0.00 41.15 1.82
894 895 2.613133 GCACGCAGCTAGTAGTAGTAGT 59.387 50.000 12.61 0.00 41.15 2.73
895 896 2.031857 GGCACGCAGCTAGTAGTAGTAG 60.032 54.545 7.56 7.56 44.79 2.57
896 897 1.945394 GGCACGCAGCTAGTAGTAGTA 59.055 52.381 6.47 0.00 44.79 1.82
897 898 0.739561 GGCACGCAGCTAGTAGTAGT 59.260 55.000 6.47 0.00 44.79 2.73
898 899 0.738975 TGGCACGCAGCTAGTAGTAG 59.261 55.000 0.00 0.00 44.79 2.57
899 900 1.337071 GATGGCACGCAGCTAGTAGTA 59.663 52.381 0.00 0.00 44.79 1.82
900 901 0.103208 GATGGCACGCAGCTAGTAGT 59.897 55.000 0.00 0.00 44.79 2.73
901 902 0.103026 TGATGGCACGCAGCTAGTAG 59.897 55.000 0.00 0.00 44.79 2.57
902 903 0.534873 TTGATGGCACGCAGCTAGTA 59.465 50.000 0.00 0.00 44.79 1.82
903 904 0.321564 TTTGATGGCACGCAGCTAGT 60.322 50.000 0.00 0.00 44.79 2.57
904 905 1.003116 GATTTGATGGCACGCAGCTAG 60.003 52.381 0.00 0.00 44.79 3.42
905 906 1.016627 GATTTGATGGCACGCAGCTA 58.983 50.000 0.00 0.00 44.79 3.32
906 907 1.805254 GATTTGATGGCACGCAGCT 59.195 52.632 0.00 0.00 44.79 4.24
907 908 1.584483 CGATTTGATGGCACGCAGC 60.584 57.895 0.00 0.00 44.65 5.25
908 909 1.584483 GCGATTTGATGGCACGCAG 60.584 57.895 12.23 0.00 46.75 5.18
909 910 2.484662 GCGATTTGATGGCACGCA 59.515 55.556 12.23 0.48 46.75 5.24
910 911 2.278142 GGCGATTTGATGGCACGC 60.278 61.111 9.12 9.12 46.79 5.34
911 912 1.063006 CTGGCGATTTGATGGCACG 59.937 57.895 0.00 0.00 36.57 5.34
912 913 0.179156 CACTGGCGATTTGATGGCAC 60.179 55.000 0.00 0.00 36.57 5.01
913 914 0.608856 ACACTGGCGATTTGATGGCA 60.609 50.000 0.00 0.00 39.03 4.92
914 915 0.527565 AACACTGGCGATTTGATGGC 59.472 50.000 0.00 0.00 0.00 4.40
915 916 1.133025 GGAACACTGGCGATTTGATGG 59.867 52.381 0.00 0.00 0.00 3.51
916 917 1.811965 TGGAACACTGGCGATTTGATG 59.188 47.619 0.00 0.00 0.00 3.07
917 918 2.086869 CTGGAACACTGGCGATTTGAT 58.913 47.619 0.00 0.00 0.00 2.57
918 919 1.522668 CTGGAACACTGGCGATTTGA 58.477 50.000 0.00 0.00 0.00 2.69
919 920 0.109597 GCTGGAACACTGGCGATTTG 60.110 55.000 0.00 0.00 0.00 2.32
920 921 0.537143 TGCTGGAACACTGGCGATTT 60.537 50.000 0.00 0.00 0.00 2.17
921 922 0.957395 CTGCTGGAACACTGGCGATT 60.957 55.000 0.00 0.00 0.00 3.34
922 923 1.376424 CTGCTGGAACACTGGCGAT 60.376 57.895 0.00 0.00 0.00 4.58
923 924 2.031012 CTGCTGGAACACTGGCGA 59.969 61.111 0.00 0.00 0.00 5.54
924 925 3.730761 GCTGCTGGAACACTGGCG 61.731 66.667 0.00 0.00 0.00 5.69
925 926 0.606401 TAAGCTGCTGGAACACTGGC 60.606 55.000 1.35 0.00 0.00 4.85
926 927 1.896220 TTAAGCTGCTGGAACACTGG 58.104 50.000 1.35 0.00 0.00 4.00
927 928 3.988379 TTTTAAGCTGCTGGAACACTG 57.012 42.857 1.35 0.00 0.00 3.66
928 929 5.335976 GCTATTTTTAAGCTGCTGGAACACT 60.336 40.000 1.35 0.00 37.01 3.55
929 930 4.859245 GCTATTTTTAAGCTGCTGGAACAC 59.141 41.667 1.35 0.00 37.01 3.32
930 931 4.082245 GGCTATTTTTAAGCTGCTGGAACA 60.082 41.667 1.35 0.00 39.97 3.18
931 932 4.158579 AGGCTATTTTTAAGCTGCTGGAAC 59.841 41.667 1.35 0.00 39.97 3.62
932 933 4.344104 AGGCTATTTTTAAGCTGCTGGAA 58.656 39.130 1.35 0.00 39.97 3.53
933 934 3.968265 AGGCTATTTTTAAGCTGCTGGA 58.032 40.909 1.35 0.00 39.97 3.86
934 935 4.725790 AAGGCTATTTTTAAGCTGCTGG 57.274 40.909 1.35 0.00 39.97 4.85
935 936 5.346822 CACAAAGGCTATTTTTAAGCTGCTG 59.653 40.000 1.35 0.00 39.97 4.41
936 937 5.011023 ACACAAAGGCTATTTTTAAGCTGCT 59.989 36.000 0.00 0.00 39.97 4.24
937 938 5.230182 ACACAAAGGCTATTTTTAAGCTGC 58.770 37.500 0.00 0.00 39.97 5.25
938 939 6.701400 ACAACACAAAGGCTATTTTTAAGCTG 59.299 34.615 0.00 0.00 39.97 4.24
939 940 6.816136 ACAACACAAAGGCTATTTTTAAGCT 58.184 32.000 0.00 0.00 39.97 3.74
940 941 7.865889 ACTACAACACAAAGGCTATTTTTAAGC 59.134 33.333 0.00 0.00 39.33 3.09
943 944 9.005777 CCTACTACAACACAAAGGCTATTTTTA 57.994 33.333 0.00 0.00 0.00 1.52
944 945 7.722285 TCCTACTACAACACAAAGGCTATTTTT 59.278 33.333 0.00 0.00 0.00 1.94
945 946 7.228590 TCCTACTACAACACAAAGGCTATTTT 58.771 34.615 0.00 0.00 0.00 1.82
946 947 6.775708 TCCTACTACAACACAAAGGCTATTT 58.224 36.000 0.00 0.00 0.00 1.40
947 948 6.013639 ACTCCTACTACAACACAAAGGCTATT 60.014 38.462 0.00 0.00 0.00 1.73
948 949 5.484290 ACTCCTACTACAACACAAAGGCTAT 59.516 40.000 0.00 0.00 0.00 2.97
949 950 4.836736 ACTCCTACTACAACACAAAGGCTA 59.163 41.667 0.00 0.00 0.00 3.93
950 951 3.646637 ACTCCTACTACAACACAAAGGCT 59.353 43.478 0.00 0.00 0.00 4.58
951 952 4.004196 ACTCCTACTACAACACAAAGGC 57.996 45.455 0.00 0.00 0.00 4.35
952 953 7.487189 CGTAATACTCCTACTACAACACAAAGG 59.513 40.741 0.00 0.00 0.00 3.11
953 954 8.025445 ACGTAATACTCCTACTACAACACAAAG 58.975 37.037 0.00 0.00 0.00 2.77
954 955 7.885297 ACGTAATACTCCTACTACAACACAAA 58.115 34.615 0.00 0.00 0.00 2.83
955 956 7.452880 ACGTAATACTCCTACTACAACACAA 57.547 36.000 0.00 0.00 0.00 3.33
956 957 7.201522 CGTACGTAATACTCCTACTACAACACA 60.202 40.741 7.22 0.00 0.00 3.72
957 958 7.119997 CGTACGTAATACTCCTACTACAACAC 58.880 42.308 7.22 0.00 0.00 3.32
958 959 6.816640 ACGTACGTAATACTCCTACTACAACA 59.183 38.462 21.41 0.00 0.00 3.33
959 960 7.119997 CACGTACGTAATACTCCTACTACAAC 58.880 42.308 22.34 0.00 0.00 3.32
960 961 6.238103 GCACGTACGTAATACTCCTACTACAA 60.238 42.308 22.34 0.00 0.00 2.41
961 962 5.234329 GCACGTACGTAATACTCCTACTACA 59.766 44.000 22.34 0.00 0.00 2.74
962 963 5.610552 CGCACGTACGTAATACTCCTACTAC 60.611 48.000 22.34 0.00 0.00 2.73
963 964 4.444388 CGCACGTACGTAATACTCCTACTA 59.556 45.833 22.34 0.00 0.00 1.82
964 965 3.246226 CGCACGTACGTAATACTCCTACT 59.754 47.826 22.34 0.00 0.00 2.57
965 966 3.535860 CGCACGTACGTAATACTCCTAC 58.464 50.000 22.34 0.04 0.00 3.18
966 967 2.032894 GCGCACGTACGTAATACTCCTA 60.033 50.000 22.34 0.00 34.88 2.94
967 968 1.268234 GCGCACGTACGTAATACTCCT 60.268 52.381 22.34 0.00 34.88 3.69
968 969 1.115639 GCGCACGTACGTAATACTCC 58.884 55.000 22.34 1.84 34.88 3.85
969 970 1.115639 GGCGCACGTACGTAATACTC 58.884 55.000 22.34 6.01 34.88 2.59
970 971 0.589729 CGGCGCACGTACGTAATACT 60.590 55.000 22.34 0.00 37.93 2.12
971 972 1.832913 CGGCGCACGTACGTAATAC 59.167 57.895 22.34 10.70 37.93 1.89
972 973 1.938814 GCGGCGCACGTACGTAATA 60.939 57.895 29.21 0.00 46.52 0.98
973 974 3.249605 GCGGCGCACGTACGTAAT 61.250 61.111 29.21 0.00 46.52 1.89
989 990 2.514013 CGTTCCATGTCGCTACGGC 61.514 63.158 0.00 0.00 0.00 5.68
990 991 3.688136 CGTTCCATGTCGCTACGG 58.312 61.111 0.00 0.00 0.00 4.02
1003 1004 1.654137 CGCTGTGTTGTTGGCGTTC 60.654 57.895 0.00 0.00 42.23 3.95
1127 1128 2.920912 TCGTGTGGGTCTGGGGAC 60.921 66.667 0.00 0.00 41.43 4.46
1150 1151 2.066999 GGATCAGTCGGGCTCCCTT 61.067 63.158 3.11 0.00 0.00 3.95
1281 1288 2.109739 ACGTCGCCAACACTTGCAA 61.110 52.632 0.00 0.00 0.00 4.08
1328 1335 3.423154 GGTGGTGAGCGCGGAAAG 61.423 66.667 8.83 0.00 0.00 2.62
1382 1389 2.084546 GGAATTCCTTCTCGTGGTTGG 58.915 52.381 17.73 0.00 0.00 3.77
1398 1405 1.417890 GGATCCATGACCGAGTGGAAT 59.582 52.381 6.95 0.00 46.78 3.01
1444 1452 3.959495 ATTGTAGCATCCAAGGGTGAT 57.041 42.857 2.93 0.00 0.00 3.06
1475 1483 1.717937 CGGCAACTGAGCACATAGC 59.282 57.895 0.00 0.00 46.19 2.97
1509 1517 8.160106 ACCTCTTTACTCTTGATGTCTTCAATT 58.840 33.333 1.91 0.00 43.30 2.32
1538 1546 2.034879 GTGATGGGGTCGCACACAG 61.035 63.158 12.15 0.00 37.30 3.66
1593 1601 1.667724 CCGCTGAGATTGTTCATGTCC 59.332 52.381 0.00 0.00 0.00 4.02
1852 2172 2.682952 ATAACGTCTCTCGCATACCG 57.317 50.000 0.00 0.00 44.19 4.02
1946 2269 3.026707 TCTGGATAATCTGACACCGGA 57.973 47.619 9.46 0.00 34.23 5.14
2777 3134 8.438373 ACTCATTCTTCATCATATCAACCAGAT 58.562 33.333 0.00 0.00 40.86 2.90
3154 3525 4.082081 GCACATCAAACCAGGAAATCATCA 60.082 41.667 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.