Multiple sequence alignment - TraesCS3A01G013500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G013500 chr3A 100.000 4143 0 0 1 4143 9779929 9784071 0.000000e+00 7651
1 TraesCS3A01G013500 chr3A 97.499 2399 47 7 947 3343 9612727 9610340 0.000000e+00 4085
2 TraesCS3A01G013500 chr3A 97.273 330 6 2 1 330 9613348 9613022 1.300000e-154 556
3 TraesCS3A01G013500 chr3A 98.113 265 3 1 325 589 9612979 9612717 1.050000e-125 460
4 TraesCS3A01G013500 chrUn 93.174 1509 90 4 1863 3371 246337618 246336123 0.000000e+00 2204
5 TraesCS3A01G013500 chrUn 95.609 911 33 3 950 1855 246339032 246338124 0.000000e+00 1454
6 TraesCS3A01G013500 chrUn 79.106 1096 212 16 2051 3138 214316711 214317797 0.000000e+00 739
7 TraesCS3A01G013500 chrUn 79.497 1034 201 11 2054 3081 238779954 238778926 0.000000e+00 725
8 TraesCS3A01G013500 chrUn 95.968 248 10 0 1432 1679 469290951 469290704 1.790000e-108 403
9 TraesCS3A01G013500 chrUn 89.179 268 21 5 325 589 246339287 246339025 1.110000e-85 327
10 TraesCS3A01G013500 chrUn 84.776 335 24 8 1 330 246339679 246339367 1.120000e-80 311
11 TraesCS3A01G013500 chrUn 85.714 280 26 9 3646 3921 246335826 246335557 2.440000e-72 283
12 TraesCS3A01G013500 chr3B 93.174 1509 90 4 1863 3371 6391718 6390223 0.000000e+00 2204
13 TraesCS3A01G013500 chr3B 95.609 911 33 3 950 1855 6393132 6392224 0.000000e+00 1454
14 TraesCS3A01G013500 chr3B 90.535 898 70 5 2481 3367 13947142 13948035 0.000000e+00 1173
15 TraesCS3A01G013500 chr3B 93.592 515 20 5 1350 1855 13939561 13940071 0.000000e+00 756
16 TraesCS3A01G013500 chr3B 79.497 1073 206 14 2051 3116 13962723 13961658 0.000000e+00 750
17 TraesCS3A01G013500 chr3B 89.179 268 21 5 325 589 6393387 6393125 1.110000e-85 327
18 TraesCS3A01G013500 chr3B 84.776 335 24 8 1 330 6393779 6393467 1.120000e-80 311
19 TraesCS3A01G013500 chr3B 85.714 280 26 9 3646 3921 6389926 6389657 2.440000e-72 283
20 TraesCS3A01G013500 chr3B 90.141 213 7 5 1 213 6667666 6667864 8.830000e-67 265
21 TraesCS3A01G013500 chr3B 85.572 201 19 8 3468 3658 13948100 13948300 7.020000e-48 202
22 TraesCS3A01G013500 chr3B 95.536 112 5 0 1 112 13939405 13939516 3.290000e-41 180
23 TraesCS3A01G013500 chr3B 96.721 61 1 1 254 313 6667856 6667916 2.640000e-17 100
24 TraesCS3A01G013500 chr3D 92.801 1514 79 8 1860 3371 4171277 4172762 0.000000e+00 2165
25 TraesCS3A01G013500 chr3D 90.557 1599 105 23 1865 3437 4073806 4072228 0.000000e+00 2074
26 TraesCS3A01G013500 chr3D 92.755 911 56 8 950 1855 4169787 4170692 0.000000e+00 1308
27 TraesCS3A01G013500 chr3D 90.999 911 53 12 950 1855 4075473 4074587 0.000000e+00 1201
28 TraesCS3A01G013500 chr3D 97.273 330 6 2 1 330 4169166 4169492 1.300000e-154 556
29 TraesCS3A01G013500 chr3D 90.746 335 26 4 1 330 4076058 4075724 3.800000e-120 442
30 TraesCS3A01G013500 chr3D 88.889 360 38 2 590 948 4502175 4501817 3.800000e-120 442
31 TraesCS3A01G013500 chr3D 95.472 265 7 2 325 589 4169535 4169794 6.410000e-113 418
32 TraesCS3A01G013500 chr3D 85.512 283 18 13 3646 3921 4072016 4071750 1.470000e-69 274
33 TraesCS3A01G013500 chr6A 91.406 1501 108 10 1879 3371 609884788 609883301 0.000000e+00 2037
34 TraesCS3A01G013500 chr6A 93.733 750 41 4 953 1697 609886358 609885610 0.000000e+00 1120
35 TraesCS3A01G013500 chr6A 87.736 106 11 2 1751 1855 609885607 609885503 5.620000e-24 122
36 TraesCS3A01G013500 chr2A 96.026 302 12 0 590 891 760765255 760764954 3.720000e-135 492
37 TraesCS3A01G013500 chr5D 87.978 366 41 3 590 953 274568773 274569137 2.960000e-116 429
38 TraesCS3A01G013500 chr5D 87.637 364 42 3 590 952 313367812 313368173 1.780000e-113 420
39 TraesCS3A01G013500 chr6D 88.089 361 41 2 589 948 94051601 94051242 1.060000e-115 427
40 TraesCS3A01G013500 chr7D 88.056 360 41 2 590 948 33043566 33043208 3.830000e-115 425
41 TraesCS3A01G013500 chr7D 88.202 356 40 2 594 948 616100059 616099705 1.380000e-114 424
42 TraesCS3A01G013500 chr2D 87.778 360 42 2 590 948 288223330 288223688 1.780000e-113 420
43 TraesCS3A01G013500 chr1D 87.500 360 43 2 590 948 487347321 487346963 8.290000e-112 414


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G013500 chr3A 9779929 9784071 4142 False 7651.000000 7651 100.000000 1 4143 1 chr3A.!!$F1 4142
1 TraesCS3A01G013500 chr3A 9610340 9613348 3008 True 1700.333333 4085 97.628333 1 3343 3 chr3A.!!$R1 3342
2 TraesCS3A01G013500 chrUn 246335557 246339679 4122 True 915.800000 2204 89.690400 1 3921 5 chrUn.!!$R3 3920
3 TraesCS3A01G013500 chrUn 214316711 214317797 1086 False 739.000000 739 79.106000 2051 3138 1 chrUn.!!$F1 1087
4 TraesCS3A01G013500 chrUn 238778926 238779954 1028 True 725.000000 725 79.497000 2054 3081 1 chrUn.!!$R1 1027
5 TraesCS3A01G013500 chr3B 6389657 6393779 4122 True 915.800000 2204 89.690400 1 3921 5 chr3B.!!$R2 3920
6 TraesCS3A01G013500 chr3B 13961658 13962723 1065 True 750.000000 750 79.497000 2051 3116 1 chr3B.!!$R1 1065
7 TraesCS3A01G013500 chr3B 13947142 13948300 1158 False 687.500000 1173 88.053500 2481 3658 2 chr3B.!!$F3 1177
8 TraesCS3A01G013500 chr3B 13939405 13940071 666 False 468.000000 756 94.564000 1 1855 2 chr3B.!!$F2 1854
9 TraesCS3A01G013500 chr3D 4169166 4172762 3596 False 1111.750000 2165 94.575250 1 3371 4 chr3D.!!$F1 3370
10 TraesCS3A01G013500 chr3D 4071750 4076058 4308 True 997.750000 2074 89.453500 1 3921 4 chr3D.!!$R2 3920
11 TraesCS3A01G013500 chr6A 609883301 609886358 3057 True 1093.000000 2037 90.958333 953 3371 3 chr6A.!!$R1 2418

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
718 822 0.042188 CACACTACACTGTGCAACGC 60.042 55.0 7.9 0.0 42.39 4.84 F
730 834 0.108186 TGCAACGCCTCACAGATAGG 60.108 55.0 0.0 0.0 37.17 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2098 3205 3.058160 GCTGTGGCTGCCGTCAAT 61.058 61.111 14.98 0.0 35.22 2.57 R
3158 4265 7.494625 TGTCCGAAATAAATACATTCAGAGTCC 59.505 37.037 0.00 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 6.538742 GCTAATGCTTGGAGTATAACAGAACA 59.461 38.462 0.00 0.00 36.03 3.18
173 174 6.613271 AGAAGAAGGCTAATATGGTCTCAGAA 59.387 38.462 0.00 0.00 0.00 3.02
175 176 6.767456 AGAAGGCTAATATGGTCTCAGAATG 58.233 40.000 0.00 0.00 37.54 2.67
330 348 4.803329 AAGGCAACATCCAGGAAGATAT 57.197 40.909 0.00 0.00 41.41 1.63
331 349 4.803329 AGGCAACATCCAGGAAGATATT 57.197 40.909 0.00 0.00 41.41 1.28
332 350 5.134725 AGGCAACATCCAGGAAGATATTT 57.865 39.130 0.00 0.00 41.41 1.40
334 352 5.103771 AGGCAACATCCAGGAAGATATTTCT 60.104 40.000 0.00 0.00 41.41 2.52
335 353 5.595952 GGCAACATCCAGGAAGATATTTCTT 59.404 40.000 0.00 0.00 44.99 2.52
588 692 2.361610 ATTCCGCCCAGCAACCAG 60.362 61.111 0.00 0.00 0.00 4.00
589 693 3.944250 ATTCCGCCCAGCAACCAGG 62.944 63.158 0.00 0.00 0.00 4.45
594 698 2.523902 CCCAGCAACCAGGGCAAA 60.524 61.111 0.00 0.00 38.44 3.68
595 699 1.914764 CCCAGCAACCAGGGCAAAT 60.915 57.895 0.00 0.00 38.44 2.32
596 700 1.482748 CCCAGCAACCAGGGCAAATT 61.483 55.000 0.00 0.00 38.44 1.82
597 701 0.397564 CCAGCAACCAGGGCAAATTT 59.602 50.000 0.00 0.00 0.00 1.82
598 702 1.515081 CAGCAACCAGGGCAAATTTG 58.485 50.000 14.03 14.03 0.00 2.32
599 703 1.070445 CAGCAACCAGGGCAAATTTGA 59.930 47.619 22.31 0.00 0.00 2.69
600 704 1.070601 AGCAACCAGGGCAAATTTGAC 59.929 47.619 22.31 19.34 34.70 3.18
601 705 1.202627 GCAACCAGGGCAAATTTGACA 60.203 47.619 25.05 0.00 38.18 3.58
602 706 2.744494 GCAACCAGGGCAAATTTGACAA 60.744 45.455 25.05 0.00 38.18 3.18
603 707 3.539604 CAACCAGGGCAAATTTGACAAA 58.460 40.909 25.05 2.48 38.18 2.83
604 708 4.136051 CAACCAGGGCAAATTTGACAAAT 58.864 39.130 25.05 7.62 38.18 2.32
605 709 4.006780 ACCAGGGCAAATTTGACAAATC 57.993 40.909 25.05 8.07 38.18 2.17
606 710 3.647590 ACCAGGGCAAATTTGACAAATCT 59.352 39.130 25.05 10.30 38.18 2.40
607 711 3.998341 CCAGGGCAAATTTGACAAATCTG 59.002 43.478 25.05 20.33 38.18 2.90
608 712 4.262549 CCAGGGCAAATTTGACAAATCTGA 60.263 41.667 25.05 0.00 38.18 3.27
609 713 4.687483 CAGGGCAAATTTGACAAATCTGAC 59.313 41.667 25.05 13.97 38.18 3.51
610 714 3.996363 GGGCAAATTTGACAAATCTGACC 59.004 43.478 20.78 20.78 39.68 4.02
611 715 4.262592 GGGCAAATTTGACAAATCTGACCT 60.263 41.667 25.90 3.67 42.64 3.85
612 716 5.047377 GGGCAAATTTGACAAATCTGACCTA 60.047 40.000 25.90 0.00 42.64 3.08
613 717 6.351286 GGGCAAATTTGACAAATCTGACCTAT 60.351 38.462 25.90 2.34 42.64 2.57
614 718 7.147915 GGGCAAATTTGACAAATCTGACCTATA 60.148 37.037 25.90 0.00 42.64 1.31
615 719 7.917505 GGCAAATTTGACAAATCTGACCTATAG 59.082 37.037 22.31 0.00 35.83 1.31
616 720 8.677300 GCAAATTTGACAAATCTGACCTATAGA 58.323 33.333 22.31 0.00 0.00 1.98
617 721 9.994432 CAAATTTGACAAATCTGACCTATAGAC 57.006 33.333 13.08 0.00 0.00 2.59
618 722 8.425577 AATTTGACAAATCTGACCTATAGACG 57.574 34.615 13.68 0.00 0.00 4.18
619 723 6.769134 TTGACAAATCTGACCTATAGACGA 57.231 37.500 0.00 0.00 0.00 4.20
620 724 6.769134 TGACAAATCTGACCTATAGACGAA 57.231 37.500 0.00 0.00 0.00 3.85
621 725 7.165460 TGACAAATCTGACCTATAGACGAAA 57.835 36.000 0.00 0.00 0.00 3.46
622 726 7.782049 TGACAAATCTGACCTATAGACGAAAT 58.218 34.615 0.00 0.00 0.00 2.17
623 727 7.921214 TGACAAATCTGACCTATAGACGAAATC 59.079 37.037 0.00 0.00 0.00 2.17
624 728 7.782049 ACAAATCTGACCTATAGACGAAATCA 58.218 34.615 0.00 0.00 0.00 2.57
625 729 8.258007 ACAAATCTGACCTATAGACGAAATCAA 58.742 33.333 0.00 0.00 0.00 2.57
626 730 9.098355 CAAATCTGACCTATAGACGAAATCAAA 57.902 33.333 0.00 0.00 0.00 2.69
627 731 9.838339 AAATCTGACCTATAGACGAAATCAAAT 57.162 29.630 0.00 0.00 0.00 2.32
628 732 9.482627 AATCTGACCTATAGACGAAATCAAATC 57.517 33.333 0.00 0.00 0.00 2.17
629 733 8.007405 TCTGACCTATAGACGAAATCAAATCA 57.993 34.615 0.00 0.00 0.00 2.57
630 734 7.921214 TCTGACCTATAGACGAAATCAAATCAC 59.079 37.037 0.00 0.00 0.00 3.06
631 735 6.695713 TGACCTATAGACGAAATCAAATCACG 59.304 38.462 0.00 0.00 0.00 4.35
632 736 5.983720 ACCTATAGACGAAATCAAATCACGG 59.016 40.000 0.00 0.00 0.00 4.94
633 737 6.183360 ACCTATAGACGAAATCAAATCACGGA 60.183 38.462 0.00 0.00 0.00 4.69
634 738 6.700081 CCTATAGACGAAATCAAATCACGGAA 59.300 38.462 0.00 0.00 0.00 4.30
635 739 7.385205 CCTATAGACGAAATCAAATCACGGAAT 59.615 37.037 0.00 0.00 0.00 3.01
636 740 5.221891 AGACGAAATCAAATCACGGAATG 57.778 39.130 0.00 0.00 0.00 2.67
637 741 4.935205 AGACGAAATCAAATCACGGAATGA 59.065 37.500 0.00 0.00 43.13 2.57
638 742 5.411361 AGACGAAATCAAATCACGGAATGAA 59.589 36.000 0.00 0.00 41.93 2.57
639 743 5.390613 ACGAAATCAAATCACGGAATGAAC 58.609 37.500 0.00 0.00 41.93 3.18
640 744 5.181245 ACGAAATCAAATCACGGAATGAACT 59.819 36.000 0.00 0.00 41.93 3.01
641 745 5.509272 CGAAATCAAATCACGGAATGAACTG 59.491 40.000 0.00 0.00 41.93 3.16
642 746 3.829886 TCAAATCACGGAATGAACTGC 57.170 42.857 0.00 0.00 41.93 4.40
643 747 2.487762 TCAAATCACGGAATGAACTGCC 59.512 45.455 0.00 0.00 41.93 4.85
644 748 1.463674 AATCACGGAATGAACTGCCC 58.536 50.000 0.00 0.00 41.93 5.36
645 749 0.744414 ATCACGGAATGAACTGCCCG 60.744 55.000 0.00 0.00 46.65 6.13
647 751 3.177600 CGGAATGAACTGCCCGTG 58.822 61.111 0.00 0.00 37.40 4.94
648 752 1.375396 CGGAATGAACTGCCCGTGA 60.375 57.895 0.00 0.00 37.40 4.35
649 753 0.953471 CGGAATGAACTGCCCGTGAA 60.953 55.000 0.00 0.00 37.40 3.18
650 754 1.243902 GGAATGAACTGCCCGTGAAA 58.756 50.000 0.00 0.00 0.00 2.69
651 755 1.068541 GGAATGAACTGCCCGTGAAAC 60.069 52.381 0.00 0.00 0.00 2.78
652 756 1.880027 GAATGAACTGCCCGTGAAACT 59.120 47.619 0.00 0.00 31.75 2.66
653 757 2.851263 ATGAACTGCCCGTGAAACTA 57.149 45.000 0.00 0.00 31.75 2.24
654 758 2.851263 TGAACTGCCCGTGAAACTAT 57.149 45.000 0.00 0.00 31.75 2.12
655 759 3.134574 TGAACTGCCCGTGAAACTATT 57.865 42.857 0.00 0.00 31.75 1.73
656 760 3.482436 TGAACTGCCCGTGAAACTATTT 58.518 40.909 0.00 0.00 31.75 1.40
657 761 3.500680 TGAACTGCCCGTGAAACTATTTC 59.499 43.478 0.00 0.00 40.08 2.17
658 762 3.134574 ACTGCCCGTGAAACTATTTCA 57.865 42.857 0.00 0.00 46.68 2.69
667 771 3.734463 TGAAACTATTTCACACGCCTGA 58.266 40.909 0.00 0.00 44.21 3.86
668 772 3.496884 TGAAACTATTTCACACGCCTGAC 59.503 43.478 0.00 0.00 44.21 3.51
669 773 2.094762 ACTATTTCACACGCCTGACC 57.905 50.000 0.00 0.00 0.00 4.02
670 774 1.338769 ACTATTTCACACGCCTGACCC 60.339 52.381 0.00 0.00 0.00 4.46
671 775 0.981183 TATTTCACACGCCTGACCCT 59.019 50.000 0.00 0.00 0.00 4.34
672 776 0.110486 ATTTCACACGCCTGACCCTT 59.890 50.000 0.00 0.00 0.00 3.95
673 777 0.106918 TTTCACACGCCTGACCCTTT 60.107 50.000 0.00 0.00 0.00 3.11
674 778 0.106918 TTCACACGCCTGACCCTTTT 60.107 50.000 0.00 0.00 0.00 2.27
675 779 0.817634 TCACACGCCTGACCCTTTTG 60.818 55.000 0.00 0.00 0.00 2.44
676 780 1.101049 CACACGCCTGACCCTTTTGT 61.101 55.000 0.00 0.00 0.00 2.83
677 781 1.101049 ACACGCCTGACCCTTTTGTG 61.101 55.000 0.00 0.00 0.00 3.33
678 782 1.101049 CACGCCTGACCCTTTTGTGT 61.101 55.000 0.00 0.00 0.00 3.72
679 783 0.470766 ACGCCTGACCCTTTTGTGTA 59.529 50.000 0.00 0.00 0.00 2.90
680 784 1.156736 CGCCTGACCCTTTTGTGTAG 58.843 55.000 0.00 0.00 0.00 2.74
681 785 0.881796 GCCTGACCCTTTTGTGTAGC 59.118 55.000 0.00 0.00 0.00 3.58
682 786 1.156736 CCTGACCCTTTTGTGTAGCG 58.843 55.000 0.00 0.00 0.00 4.26
683 787 0.517316 CTGACCCTTTTGTGTAGCGC 59.483 55.000 0.00 0.00 0.00 5.92
684 788 0.887387 TGACCCTTTTGTGTAGCGCC 60.887 55.000 2.29 0.00 0.00 6.53
685 789 1.583495 GACCCTTTTGTGTAGCGCCC 61.583 60.000 2.29 0.00 0.00 6.13
686 790 2.686816 CCCTTTTGTGTAGCGCCCG 61.687 63.158 2.29 0.00 0.00 6.13
687 791 2.175811 CTTTTGTGTAGCGCCCGC 59.824 61.111 2.29 4.20 42.33 6.13
688 792 3.322706 CTTTTGTGTAGCGCCCGCC 62.323 63.158 2.29 0.00 43.17 6.13
689 793 4.627801 TTTGTGTAGCGCCCGCCA 62.628 61.111 2.29 0.00 43.17 5.69
705 809 4.710695 CACGACGGCGCCACACTA 62.711 66.667 28.98 0.00 42.48 2.74
706 810 4.712425 ACGACGGCGCCACACTAC 62.712 66.667 28.98 9.19 42.48 2.73
707 811 4.710695 CGACGGCGCCACACTACA 62.711 66.667 28.98 0.00 0.00 2.74
708 812 3.110178 GACGGCGCCACACTACAC 61.110 66.667 28.98 3.88 0.00 2.90
709 813 3.569049 GACGGCGCCACACTACACT 62.569 63.158 28.98 0.00 0.00 3.55
710 814 3.112075 CGGCGCCACACTACACTG 61.112 66.667 28.98 0.98 0.00 3.66
711 815 2.030562 GGCGCCACACTACACTGT 59.969 61.111 24.80 0.00 0.00 3.55
712 816 2.317609 GGCGCCACACTACACTGTG 61.318 63.158 24.80 6.19 41.19 3.66
713 817 2.954753 GCGCCACACTACACTGTGC 61.955 63.158 7.90 0.00 40.33 4.57
714 818 1.594021 CGCCACACTACACTGTGCA 60.594 57.895 7.90 0.00 40.33 4.57
715 819 1.157257 CGCCACACTACACTGTGCAA 61.157 55.000 7.90 0.00 40.33 4.08
716 820 0.307760 GCCACACTACACTGTGCAAC 59.692 55.000 7.90 0.00 40.33 4.17
717 821 0.581529 CCACACTACACTGTGCAACG 59.418 55.000 7.90 0.00 42.39 4.10
718 822 0.042188 CACACTACACTGTGCAACGC 60.042 55.000 7.90 0.00 42.39 4.84
719 823 1.157870 ACACTACACTGTGCAACGCC 61.158 55.000 7.90 0.00 42.39 5.68
720 824 0.880278 CACTACACTGTGCAACGCCT 60.880 55.000 7.90 0.00 42.39 5.52
721 825 0.600255 ACTACACTGTGCAACGCCTC 60.600 55.000 7.90 0.00 42.39 4.70
722 826 0.599991 CTACACTGTGCAACGCCTCA 60.600 55.000 7.90 0.00 42.39 3.86
723 827 0.878523 TACACTGTGCAACGCCTCAC 60.879 55.000 7.90 0.00 42.39 3.51
724 828 2.179547 CACTGTGCAACGCCTCACA 61.180 57.895 0.00 4.54 42.39 3.58
726 830 2.503546 TGTGCAACGCCTCACAGA 59.496 55.556 0.00 0.00 42.39 3.41
727 831 1.071299 TGTGCAACGCCTCACAGAT 59.929 52.632 0.00 0.00 42.39 2.90
728 832 0.320050 TGTGCAACGCCTCACAGATA 59.680 50.000 0.00 0.00 42.39 1.98
729 833 1.002366 GTGCAACGCCTCACAGATAG 58.998 55.000 0.00 0.00 33.63 2.08
730 834 0.108186 TGCAACGCCTCACAGATAGG 60.108 55.000 0.00 0.00 37.17 2.57
736 840 3.875838 CCTCACAGATAGGCGCTAC 57.124 57.895 7.64 0.00 0.00 3.58
737 841 1.032794 CCTCACAGATAGGCGCTACA 58.967 55.000 7.64 0.00 0.00 2.74
738 842 1.269309 CCTCACAGATAGGCGCTACAC 60.269 57.143 7.64 0.00 0.00 2.90
740 844 0.595053 CACAGATAGGCGCTACACGG 60.595 60.000 7.64 0.58 43.93 4.94
749 853 4.735132 GCTACACGGCCAGCGTCA 62.735 66.667 2.24 0.00 0.00 4.35
750 854 2.184322 CTACACGGCCAGCGTCAT 59.816 61.111 2.24 0.00 0.00 3.06
751 855 1.435925 CTACACGGCCAGCGTCATA 59.564 57.895 2.24 0.00 0.00 2.15
752 856 0.870307 CTACACGGCCAGCGTCATAC 60.870 60.000 2.24 0.00 0.00 2.39
753 857 2.287457 TACACGGCCAGCGTCATACC 62.287 60.000 2.24 0.00 0.00 2.73
754 858 4.157120 ACGGCCAGCGTCATACCC 62.157 66.667 2.24 0.00 0.00 3.69
756 860 3.845259 GGCCAGCGTCATACCCGA 61.845 66.667 0.00 0.00 0.00 5.14
757 861 2.185867 GCCAGCGTCATACCCGAA 59.814 61.111 0.00 0.00 0.00 4.30
758 862 1.448893 GCCAGCGTCATACCCGAAA 60.449 57.895 0.00 0.00 0.00 3.46
759 863 1.022451 GCCAGCGTCATACCCGAAAA 61.022 55.000 0.00 0.00 0.00 2.29
760 864 1.663695 CCAGCGTCATACCCGAAAAT 58.336 50.000 0.00 0.00 0.00 1.82
761 865 2.014128 CCAGCGTCATACCCGAAAATT 58.986 47.619 0.00 0.00 0.00 1.82
762 866 3.199677 CCAGCGTCATACCCGAAAATTA 58.800 45.455 0.00 0.00 0.00 1.40
763 867 3.001939 CCAGCGTCATACCCGAAAATTAC 59.998 47.826 0.00 0.00 0.00 1.89
764 868 3.869246 CAGCGTCATACCCGAAAATTACT 59.131 43.478 0.00 0.00 0.00 2.24
765 869 5.045215 CAGCGTCATACCCGAAAATTACTA 58.955 41.667 0.00 0.00 0.00 1.82
766 870 5.521010 CAGCGTCATACCCGAAAATTACTAA 59.479 40.000 0.00 0.00 0.00 2.24
767 871 6.036300 CAGCGTCATACCCGAAAATTACTAAA 59.964 38.462 0.00 0.00 0.00 1.85
768 872 6.594937 AGCGTCATACCCGAAAATTACTAAAA 59.405 34.615 0.00 0.00 0.00 1.52
769 873 6.684131 GCGTCATACCCGAAAATTACTAAAAC 59.316 38.462 0.00 0.00 0.00 2.43
770 874 7.623925 GCGTCATACCCGAAAATTACTAAAACA 60.624 37.037 0.00 0.00 0.00 2.83
771 875 7.901377 CGTCATACCCGAAAATTACTAAAACAG 59.099 37.037 0.00 0.00 0.00 3.16
772 876 8.724229 GTCATACCCGAAAATTACTAAAACAGT 58.276 33.333 0.00 0.00 41.62 3.55
773 877 8.723311 TCATACCCGAAAATTACTAAAACAGTG 58.277 33.333 0.00 0.00 38.24 3.66
774 878 6.947644 ACCCGAAAATTACTAAAACAGTGT 57.052 33.333 0.00 0.00 38.24 3.55
775 879 6.731164 ACCCGAAAATTACTAAAACAGTGTG 58.269 36.000 0.00 0.00 38.24 3.82
776 880 5.627780 CCCGAAAATTACTAAAACAGTGTGC 59.372 40.000 0.00 0.00 38.24 4.57
777 881 6.202937 CCGAAAATTACTAAAACAGTGTGCA 58.797 36.000 0.00 0.00 38.24 4.57
778 882 6.359617 CCGAAAATTACTAAAACAGTGTGCAG 59.640 38.462 0.00 0.00 38.24 4.41
779 883 6.129457 CGAAAATTACTAAAACAGTGTGCAGC 60.129 38.462 0.00 0.00 38.24 5.25
780 884 3.870723 TTACTAAAACAGTGTGCAGCG 57.129 42.857 0.00 0.00 38.24 5.18
781 885 0.307760 ACTAAAACAGTGTGCAGCGC 59.692 50.000 0.00 0.00 35.62 5.92
782 886 0.385974 CTAAAACAGTGTGCAGCGCC 60.386 55.000 2.29 0.00 0.00 6.53
783 887 0.817634 TAAAACAGTGTGCAGCGCCT 60.818 50.000 2.29 0.00 0.00 5.52
784 888 2.340453 AAAACAGTGTGCAGCGCCTG 62.340 55.000 17.86 17.86 34.12 4.85
785 889 3.755526 AACAGTGTGCAGCGCCTGA 62.756 57.895 23.39 0.00 32.44 3.86
786 890 3.420606 CAGTGTGCAGCGCCTGAG 61.421 66.667 15.59 0.00 32.44 3.35
787 891 3.619767 AGTGTGCAGCGCCTGAGA 61.620 61.111 2.29 0.00 32.44 3.27
788 892 3.117171 GTGTGCAGCGCCTGAGAG 61.117 66.667 2.29 0.00 32.44 3.20
798 902 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
799 903 2.725312 CCTGAGAGCTAGGCGCCAA 61.725 63.158 31.54 2.01 40.39 4.52
800 904 1.219124 CTGAGAGCTAGGCGCCAAA 59.781 57.895 31.54 15.80 40.39 3.28
801 905 1.079127 TGAGAGCTAGGCGCCAAAC 60.079 57.895 31.54 17.11 40.39 2.93
802 906 1.219393 GAGAGCTAGGCGCCAAACT 59.781 57.895 31.54 21.99 40.39 2.66
803 907 0.460311 GAGAGCTAGGCGCCAAACTA 59.540 55.000 31.54 11.42 40.39 2.24
804 908 1.069358 GAGAGCTAGGCGCCAAACTAT 59.931 52.381 31.54 19.18 40.39 2.12
805 909 2.296471 GAGAGCTAGGCGCCAAACTATA 59.704 50.000 31.54 10.17 40.39 1.31
806 910 2.036089 AGAGCTAGGCGCCAAACTATAC 59.964 50.000 31.54 11.65 40.39 1.47
807 911 1.760613 AGCTAGGCGCCAAACTATACA 59.239 47.619 31.54 0.33 40.39 2.29
808 912 2.135933 GCTAGGCGCCAAACTATACAG 58.864 52.381 31.54 11.37 0.00 2.74
809 913 2.483188 GCTAGGCGCCAAACTATACAGT 60.483 50.000 31.54 5.27 36.19 3.55
810 914 2.024176 AGGCGCCAAACTATACAGTG 57.976 50.000 31.54 0.00 34.36 3.66
811 915 0.377203 GGCGCCAAACTATACAGTGC 59.623 55.000 24.80 0.00 34.36 4.40
812 916 1.083489 GCGCCAAACTATACAGTGCA 58.917 50.000 0.00 0.00 34.36 4.57
813 917 1.062587 GCGCCAAACTATACAGTGCAG 59.937 52.381 0.00 0.00 34.36 4.41
814 918 1.062587 CGCCAAACTATACAGTGCAGC 59.937 52.381 0.00 0.00 34.36 5.25
815 919 1.062587 GCCAAACTATACAGTGCAGCG 59.937 52.381 0.00 0.00 34.36 5.18
816 920 1.062587 CCAAACTATACAGTGCAGCGC 59.937 52.381 0.00 0.00 34.36 5.92
817 921 1.062587 CAAACTATACAGTGCAGCGCC 59.937 52.381 2.29 0.00 34.36 6.53
818 922 0.537188 AACTATACAGTGCAGCGCCT 59.463 50.000 2.29 0.00 34.36 5.52
819 923 1.399714 ACTATACAGTGCAGCGCCTA 58.600 50.000 2.29 0.00 32.25 3.93
820 924 1.338337 ACTATACAGTGCAGCGCCTAG 59.662 52.381 2.29 0.00 32.25 3.02
821 925 4.475312 ACTATACAGTGCAGCGCCTAGC 62.475 54.545 2.29 7.01 38.99 3.42
833 937 4.530857 CCTAGCTCCCGGGCGTTG 62.531 72.222 18.49 6.95 37.29 4.10
838 942 4.077184 CTCCCGGGCGTTGCACTA 62.077 66.667 18.49 0.00 0.00 2.74
839 943 4.077184 TCCCGGGCGTTGCACTAG 62.077 66.667 18.49 0.00 0.00 2.57
840 944 4.388499 CCCGGGCGTTGCACTAGT 62.388 66.667 8.08 0.00 0.00 2.57
841 945 3.118454 CCGGGCGTTGCACTAGTG 61.118 66.667 18.93 18.93 0.00 2.74
852 956 3.134401 CACTAGTGCAGCACCTGAG 57.866 57.895 22.41 18.14 34.49 3.35
853 957 0.605083 CACTAGTGCAGCACCTGAGA 59.395 55.000 22.41 1.93 34.49 3.27
854 958 0.894141 ACTAGTGCAGCACCTGAGAG 59.106 55.000 22.41 13.43 34.49 3.20
855 959 0.459934 CTAGTGCAGCACCTGAGAGC 60.460 60.000 22.41 0.00 34.49 4.09
856 960 0.902048 TAGTGCAGCACCTGAGAGCT 60.902 55.000 22.41 3.33 40.96 4.09
857 961 0.902048 AGTGCAGCACCTGAGAGCTA 60.902 55.000 22.41 0.00 37.90 3.32
858 962 0.459934 GTGCAGCACCTGAGAGCTAG 60.460 60.000 15.27 0.00 37.90 3.42
859 963 1.143620 GCAGCACCTGAGAGCTAGG 59.856 63.158 0.00 0.00 37.90 3.02
860 964 1.143620 CAGCACCTGAGAGCTAGGC 59.856 63.158 0.60 0.00 37.90 3.93
861 965 2.105930 GCACCTGAGAGCTAGGCG 59.894 66.667 0.60 0.00 38.96 5.52
862 966 2.105930 CACCTGAGAGCTAGGCGC 59.894 66.667 0.00 0.00 38.96 6.53
863 967 3.151022 ACCTGAGAGCTAGGCGCC 61.151 66.667 21.89 21.89 38.96 6.53
864 968 3.150335 CCTGAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
865 969 2.105930 CTGAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
866 970 3.764810 CTGAGAGCTAGGCGCCACG 62.765 68.421 31.54 19.97 40.39 4.94
867 971 4.577246 GAGAGCTAGGCGCCACGG 62.577 72.222 31.54 18.60 40.39 4.94
872 976 4.514577 CTAGGCGCCACGGGTCAG 62.515 72.222 31.54 9.46 0.00 3.51
880 984 4.662961 CACGGGTCAGCTGCGTGA 62.663 66.667 29.81 4.47 33.02 4.35
881 985 3.923864 ACGGGTCAGCTGCGTGAA 61.924 61.111 15.63 0.00 0.00 3.18
882 986 2.664851 CGGGTCAGCTGCGTGAAA 60.665 61.111 9.47 0.00 0.00 2.69
883 987 2.034879 CGGGTCAGCTGCGTGAAAT 61.035 57.895 9.47 0.00 0.00 2.17
884 988 0.739462 CGGGTCAGCTGCGTGAAATA 60.739 55.000 9.47 0.00 0.00 1.40
885 989 1.009829 GGGTCAGCTGCGTGAAATAG 58.990 55.000 9.47 0.00 0.00 1.73
886 990 1.676014 GGGTCAGCTGCGTGAAATAGT 60.676 52.381 9.47 0.00 0.00 2.12
887 991 2.076863 GGTCAGCTGCGTGAAATAGTT 58.923 47.619 9.47 0.00 0.00 2.24
888 992 2.484264 GGTCAGCTGCGTGAAATAGTTT 59.516 45.455 9.47 0.00 0.00 2.66
889 993 3.482786 GTCAGCTGCGTGAAATAGTTTG 58.517 45.455 9.47 0.00 0.00 2.93
890 994 3.186409 GTCAGCTGCGTGAAATAGTTTGA 59.814 43.478 9.47 0.00 0.00 2.69
891 995 3.186409 TCAGCTGCGTGAAATAGTTTGAC 59.814 43.478 9.47 0.00 0.00 3.18
897 1001 4.307834 CGTGAAATAGTTTGACGGACAG 57.692 45.455 6.54 0.00 44.58 3.51
898 1002 3.739300 CGTGAAATAGTTTGACGGACAGT 59.261 43.478 6.54 0.00 44.58 3.55
899 1003 4.210537 CGTGAAATAGTTTGACGGACAGTT 59.789 41.667 6.54 0.00 44.58 3.16
900 1004 5.611844 CGTGAAATAGTTTGACGGACAGTTC 60.612 44.000 6.54 0.00 44.58 3.01
901 1005 5.235616 GTGAAATAGTTTGACGGACAGTTCA 59.764 40.000 0.00 0.00 0.00 3.18
902 1006 5.995282 TGAAATAGTTTGACGGACAGTTCAT 59.005 36.000 0.00 0.00 0.00 2.57
903 1007 6.485313 TGAAATAGTTTGACGGACAGTTCATT 59.515 34.615 0.00 0.00 0.00 2.57
904 1008 6.481954 AATAGTTTGACGGACAGTTCATTC 57.518 37.500 0.00 0.00 0.00 2.67
905 1009 4.073293 AGTTTGACGGACAGTTCATTCT 57.927 40.909 0.00 0.00 0.00 2.40
906 1010 3.809832 AGTTTGACGGACAGTTCATTCTG 59.190 43.478 0.00 0.00 40.80 3.02
908 1012 2.754472 TGACGGACAGTTCATTCTGTG 58.246 47.619 4.06 0.00 46.81 3.66
909 1013 2.364002 TGACGGACAGTTCATTCTGTGA 59.636 45.455 4.06 0.00 46.81 3.58
910 1014 3.006859 TGACGGACAGTTCATTCTGTGAT 59.993 43.478 4.06 0.00 46.81 3.06
911 1015 3.997021 GACGGACAGTTCATTCTGTGATT 59.003 43.478 4.06 0.00 46.81 2.57
912 1016 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
913 1017 4.214119 ACGGACAGTTCATTCTGTGATTTG 59.786 41.667 4.06 0.00 46.81 2.32
914 1018 4.452114 CGGACAGTTCATTCTGTGATTTGA 59.548 41.667 4.06 0.00 46.81 2.69
915 1019 5.122869 CGGACAGTTCATTCTGTGATTTGAT 59.877 40.000 4.06 0.00 46.81 2.57
916 1020 6.348786 CGGACAGTTCATTCTGTGATTTGATT 60.349 38.462 4.06 0.00 46.81 2.57
917 1021 7.373493 GGACAGTTCATTCTGTGATTTGATTT 58.627 34.615 4.06 0.00 46.81 2.17
918 1022 7.540055 GGACAGTTCATTCTGTGATTTGATTTC 59.460 37.037 4.06 0.00 46.81 2.17
919 1023 7.080099 ACAGTTCATTCTGTGATTTGATTTCG 58.920 34.615 0.00 0.00 45.40 3.46
920 1024 7.080099 CAGTTCATTCTGTGATTTGATTTCGT 58.920 34.615 0.00 0.00 36.54 3.85
921 1025 7.269937 CAGTTCATTCTGTGATTTGATTTCGTC 59.730 37.037 0.00 0.00 36.54 4.20
922 1026 7.173907 AGTTCATTCTGTGATTTGATTTCGTCT 59.826 33.333 0.00 0.00 36.54 4.18
923 1027 8.443160 GTTCATTCTGTGATTTGATTTCGTCTA 58.557 33.333 0.00 0.00 36.54 2.59
924 1028 8.722480 TCATTCTGTGATTTGATTTCGTCTAT 57.278 30.769 0.00 0.00 0.00 1.98
925 1029 9.816354 TCATTCTGTGATTTGATTTCGTCTATA 57.184 29.630 0.00 0.00 0.00 1.31
927 1031 8.648557 TTCTGTGATTTGATTTCGTCTATAGG 57.351 34.615 0.00 0.00 0.00 2.57
928 1032 7.782049 TCTGTGATTTGATTTCGTCTATAGGT 58.218 34.615 0.00 0.00 0.00 3.08
929 1033 7.921214 TCTGTGATTTGATTTCGTCTATAGGTC 59.079 37.037 0.00 0.00 0.00 3.85
930 1034 7.552459 TGTGATTTGATTTCGTCTATAGGTCA 58.448 34.615 0.00 0.00 0.00 4.02
931 1035 7.706607 TGTGATTTGATTTCGTCTATAGGTCAG 59.293 37.037 0.00 0.00 0.00 3.51
932 1036 7.921214 GTGATTTGATTTCGTCTATAGGTCAGA 59.079 37.037 0.00 0.00 0.00 3.27
933 1037 8.642432 TGATTTGATTTCGTCTATAGGTCAGAT 58.358 33.333 0.00 0.00 0.00 2.90
934 1038 9.482627 GATTTGATTTCGTCTATAGGTCAGATT 57.517 33.333 0.00 0.00 0.00 2.40
935 1039 9.838339 ATTTGATTTCGTCTATAGGTCAGATTT 57.162 29.630 0.00 0.00 0.00 2.17
936 1040 8.648557 TTGATTTCGTCTATAGGTCAGATTTG 57.351 34.615 0.00 0.00 0.00 2.32
937 1041 7.782049 TGATTTCGTCTATAGGTCAGATTTGT 58.218 34.615 0.00 0.00 0.00 2.83
938 1042 7.921214 TGATTTCGTCTATAGGTCAGATTTGTC 59.079 37.037 0.00 0.00 0.00 3.18
939 1043 6.769134 TTCGTCTATAGGTCAGATTTGTCA 57.231 37.500 0.00 0.00 0.00 3.58
940 1044 6.769134 TCGTCTATAGGTCAGATTTGTCAA 57.231 37.500 0.00 0.00 0.00 3.18
941 1045 7.165460 TCGTCTATAGGTCAGATTTGTCAAA 57.835 36.000 0.00 0.00 0.00 2.69
942 1046 7.782049 TCGTCTATAGGTCAGATTTGTCAAAT 58.218 34.615 10.63 10.63 0.00 2.32
943 1047 8.258007 TCGTCTATAGGTCAGATTTGTCAAATT 58.742 33.333 12.04 0.00 0.00 1.82
944 1048 8.883731 CGTCTATAGGTCAGATTTGTCAAATTT 58.116 33.333 12.04 3.94 0.00 1.82
945 1049 9.994432 GTCTATAGGTCAGATTTGTCAAATTTG 57.006 33.333 18.38 18.38 35.08 2.32
946 1050 8.677300 TCTATAGGTCAGATTTGTCAAATTTGC 58.323 33.333 19.26 14.98 34.12 3.68
947 1051 4.886579 AGGTCAGATTTGTCAAATTTGCC 58.113 39.130 19.26 20.61 34.12 4.52
948 1052 4.344679 AGGTCAGATTTGTCAAATTTGCCA 59.655 37.500 26.06 5.45 34.59 4.92
949 1053 4.687483 GGTCAGATTTGTCAAATTTGCCAG 59.313 41.667 22.89 8.21 34.12 4.85
950 1054 4.151157 GTCAGATTTGTCAAATTTGCCAGC 59.849 41.667 19.26 2.49 34.12 4.85
951 1055 4.059511 CAGATTTGTCAAATTTGCCAGCA 58.940 39.130 13.54 6.85 0.00 4.41
1399 1503 1.264020 CAACGCCGTGGGATTATGATG 59.736 52.381 0.00 0.00 0.00 3.07
2600 3707 0.464373 ATACCTGCATCAAGGGTGCG 60.464 55.000 4.89 0.00 45.37 5.34
2989 4096 8.596781 AAGAGAAGGATACAGTAAGAAAGCTA 57.403 34.615 0.00 0.00 41.41 3.32
3205 4312 4.142687 ACACCGATACTTAATTTGCTGCAC 60.143 41.667 0.00 0.00 0.00 4.57
3209 4316 5.293324 CCGATACTTAATTTGCTGCACAGTA 59.707 40.000 0.00 0.00 0.00 2.74
3297 4413 2.202743 GCCGTACAGCATCTCGCA 60.203 61.111 0.00 0.00 46.13 5.10
3314 4430 2.157863 TCGCAACGTGAAATATCGCAAA 59.842 40.909 0.00 0.00 35.77 3.68
3316 4442 4.033014 TCGCAACGTGAAATATCGCAAATA 59.967 37.500 0.00 0.00 35.77 1.40
3323 4449 5.787062 CGTGAAATATCGCAAATATCTGCAG 59.213 40.000 7.63 7.63 42.77 4.41
3371 4497 1.274167 GTCATCGGTCACCTTGTGGTA 59.726 52.381 0.00 0.00 46.60 3.25
3373 4499 3.131577 GTCATCGGTCACCTTGTGGTATA 59.868 47.826 0.00 0.00 46.60 1.47
3374 4500 3.964688 TCATCGGTCACCTTGTGGTATAT 59.035 43.478 0.00 0.00 46.60 0.86
3376 4502 5.599242 TCATCGGTCACCTTGTGGTATATTA 59.401 40.000 0.00 0.00 46.60 0.98
3377 4503 5.266733 TCGGTCACCTTGTGGTATATTAC 57.733 43.478 0.00 0.00 46.60 1.89
3378 4504 4.099881 TCGGTCACCTTGTGGTATATTACC 59.900 45.833 0.00 0.00 46.60 2.85
3391 4517 5.307926 GTATATTACCAGGGTAGTCTCGC 57.692 47.826 0.00 0.00 31.71 5.03
3392 4518 1.411041 ATTACCAGGGTAGTCTCGCC 58.589 55.000 0.00 0.00 31.71 5.54
3393 4519 0.040058 TTACCAGGGTAGTCTCGCCA 59.960 55.000 0.00 0.00 31.71 5.69
3394 4520 0.260816 TACCAGGGTAGTCTCGCCAT 59.739 55.000 0.00 0.00 0.00 4.40
3395 4521 1.330655 ACCAGGGTAGTCTCGCCATG 61.331 60.000 0.00 2.16 36.43 3.66
3398 4524 0.324368 AGGGTAGTCTCGCCATGTGA 60.324 55.000 0.00 0.00 0.00 3.58
3399 4525 0.179108 GGGTAGTCTCGCCATGTGAC 60.179 60.000 0.00 0.00 40.57 3.67
3401 4527 1.204941 GGTAGTCTCGCCATGTGACTT 59.795 52.381 11.30 0.84 46.46 3.01
3403 4529 3.119245 GGTAGTCTCGCCATGTGACTTAA 60.119 47.826 11.30 0.00 46.46 1.85
3422 4558 7.277981 TGACTTAATTAGCTAACTTGCTACTGC 59.722 37.037 8.70 0.00 44.15 4.40
3437 4573 3.181465 GCTACTGCCACCATGTAGTGTAT 60.181 47.826 0.00 0.00 36.84 2.29
3440 4576 3.198068 CTGCCACCATGTAGTGTATGAC 58.802 50.000 2.08 0.00 35.93 3.06
3442 4578 2.093181 GCCACCATGTAGTGTATGACCA 60.093 50.000 2.08 0.00 35.93 4.02
3445 4581 5.297547 CCACCATGTAGTGTATGACCATAC 58.702 45.833 12.02 12.02 42.95 2.39
3446 4582 5.297547 CACCATGTAGTGTATGACCATACC 58.702 45.833 15.25 8.43 42.19 2.73
3447 4583 4.966168 ACCATGTAGTGTATGACCATACCA 59.034 41.667 15.25 8.02 42.19 3.25
3448 4584 5.070446 ACCATGTAGTGTATGACCATACCAG 59.930 44.000 15.25 1.81 42.19 4.00
3449 4585 5.511373 CCATGTAGTGTATGACCATACCAGG 60.511 48.000 15.25 8.84 42.19 4.45
3450 4586 3.964688 TGTAGTGTATGACCATACCAGGG 59.035 47.826 15.25 0.00 42.19 4.45
3451 4587 3.130734 AGTGTATGACCATACCAGGGT 57.869 47.619 15.25 0.00 42.19 4.34
3452 4588 4.274794 AGTGTATGACCATACCAGGGTA 57.725 45.455 15.25 0.00 42.19 3.69
3453 4589 4.827789 AGTGTATGACCATACCAGGGTAT 58.172 43.478 15.25 5.14 42.19 2.73
3467 4603 4.590647 ACCAGGGTATGACTATGACATGAG 59.409 45.833 0.00 0.00 0.00 2.90
3468 4604 4.835056 CCAGGGTATGACTATGACATGAGA 59.165 45.833 0.00 0.00 0.00 3.27
3470 4606 6.013898 CCAGGGTATGACTATGACATGAGATT 60.014 42.308 0.00 0.00 0.00 2.40
3471 4607 6.872547 CAGGGTATGACTATGACATGAGATTG 59.127 42.308 0.00 0.00 0.00 2.67
3536 4703 7.328277 TGAATTTGTAGTATTGGGGAATTCG 57.672 36.000 0.00 0.00 35.74 3.34
3537 4704 7.113437 TGAATTTGTAGTATTGGGGAATTCGA 58.887 34.615 0.00 0.00 35.74 3.71
3538 4705 6.937436 ATTTGTAGTATTGGGGAATTCGAC 57.063 37.500 0.00 0.00 0.00 4.20
3539 4706 5.423704 TTGTAGTATTGGGGAATTCGACA 57.576 39.130 0.00 0.00 0.00 4.35
3540 4707 5.423704 TGTAGTATTGGGGAATTCGACAA 57.576 39.130 13.58 13.58 0.00 3.18
3541 4708 5.424757 TGTAGTATTGGGGAATTCGACAAG 58.575 41.667 15.60 0.00 0.00 3.16
3542 4709 3.279434 AGTATTGGGGAATTCGACAAGC 58.721 45.455 15.60 11.81 0.00 4.01
3543 4710 1.094785 ATTGGGGAATTCGACAAGCG 58.905 50.000 15.60 0.00 42.69 4.68
3630 4833 2.606108 TCAAGTACGCATACAGCTGTG 58.394 47.619 29.57 14.75 42.61 3.66
3644 4847 5.779529 ACAGCTGTGAAAATGAGACAAAT 57.220 34.783 20.97 0.00 0.00 2.32
3658 4861 2.035704 AGACAAATTGGAAATGCGCACA 59.964 40.909 14.90 2.35 0.00 4.57
3679 4882 0.544223 GAGAAAGGGGAAGGAGGAGC 59.456 60.000 0.00 0.00 0.00 4.70
3724 4927 2.407428 CGAGCTACCAGAGACGGCA 61.407 63.158 0.00 0.00 0.00 5.69
3728 4931 2.360726 TACCAGAGACGGCAGCGA 60.361 61.111 0.00 0.00 0.00 4.93
3729 4932 2.600122 CTACCAGAGACGGCAGCGAC 62.600 65.000 0.00 0.00 0.00 5.19
3776 4980 2.997315 CACGGGAGAGTGGCTGGA 60.997 66.667 0.00 0.00 38.40 3.86
3777 4981 2.039624 ACGGGAGAGTGGCTGGAT 59.960 61.111 0.00 0.00 0.00 3.41
3814 5018 2.124570 CGGGAGGCATTGGGAGTG 60.125 66.667 0.00 0.00 0.00 3.51
3818 5022 2.204291 AGGCATTGGGAGTGGGGA 60.204 61.111 0.00 0.00 0.00 4.81
3838 5042 4.685026 CGGTCTAGATCGCCGCCG 62.685 72.222 13.32 7.66 38.99 6.46
3946 5153 4.871933 TTTCTTTTGATGAGAAAGGGCC 57.128 40.909 0.00 0.00 38.00 5.80
3947 5154 2.436417 TCTTTTGATGAGAAAGGGCCG 58.564 47.619 0.00 0.00 35.37 6.13
3948 5155 0.887933 TTTTGATGAGAAAGGGCCGC 59.112 50.000 0.00 0.00 0.00 6.53
3949 5156 0.965363 TTTGATGAGAAAGGGCCGCC 60.965 55.000 0.00 0.00 0.00 6.13
3950 5157 2.135903 TTGATGAGAAAGGGCCGCCA 62.136 55.000 12.58 0.00 0.00 5.69
3951 5158 1.378514 GATGAGAAAGGGCCGCCAA 60.379 57.895 12.58 0.00 0.00 4.52
3952 5159 1.657751 GATGAGAAAGGGCCGCCAAC 61.658 60.000 12.58 0.00 0.00 3.77
3953 5160 2.282180 GAGAAAGGGCCGCCAACA 60.282 61.111 12.58 0.00 0.00 3.33
3954 5161 1.901464 GAGAAAGGGCCGCCAACAA 60.901 57.895 12.58 0.00 0.00 2.83
3955 5162 1.228862 AGAAAGGGCCGCCAACAAT 60.229 52.632 12.58 0.00 0.00 2.71
3956 5163 0.831711 AGAAAGGGCCGCCAACAATT 60.832 50.000 12.58 0.00 0.00 2.32
3957 5164 0.670239 GAAAGGGCCGCCAACAATTG 60.670 55.000 12.58 3.24 0.00 2.32
3971 5178 5.824904 CAACAATTGGATCCAAGTAGAGG 57.175 43.478 29.98 18.54 39.47 3.69
3972 5179 3.891049 ACAATTGGATCCAAGTAGAGGC 58.109 45.455 29.98 0.00 39.47 4.70
3973 5180 2.874701 CAATTGGATCCAAGTAGAGGCG 59.125 50.000 29.98 12.55 39.47 5.52
3974 5181 0.830648 TTGGATCCAAGTAGAGGCGG 59.169 55.000 23.63 0.00 0.00 6.13
3975 5182 1.048724 TGGATCCAAGTAGAGGCGGG 61.049 60.000 13.46 0.00 0.00 6.13
3976 5183 1.069935 GATCCAAGTAGAGGCGGGC 59.930 63.158 0.00 0.00 0.00 6.13
3977 5184 2.384653 GATCCAAGTAGAGGCGGGCC 62.385 65.000 0.18 0.18 0.00 5.80
3978 5185 3.399181 CCAAGTAGAGGCGGGCCA 61.399 66.667 12.97 0.00 38.92 5.36
3979 5186 2.746375 CCAAGTAGAGGCGGGCCAT 61.746 63.158 12.97 2.51 38.92 4.40
3980 5187 1.407656 CCAAGTAGAGGCGGGCCATA 61.408 60.000 12.97 1.48 38.92 2.74
3981 5188 0.249911 CAAGTAGAGGCGGGCCATAC 60.250 60.000 12.97 13.59 38.92 2.39
3982 5189 0.689745 AAGTAGAGGCGGGCCATACA 60.690 55.000 20.37 0.05 38.92 2.29
3983 5190 1.115930 AGTAGAGGCGGGCCATACAG 61.116 60.000 20.37 0.00 38.92 2.74
3984 5191 1.075525 TAGAGGCGGGCCATACAGT 60.076 57.895 12.97 0.00 38.92 3.55
3985 5192 1.399744 TAGAGGCGGGCCATACAGTG 61.400 60.000 12.97 0.00 38.92 3.66
3996 5203 3.721087 CCATACAGTGGGACCTTTTCT 57.279 47.619 0.00 0.00 44.79 2.52
3997 5204 3.347216 CCATACAGTGGGACCTTTTCTG 58.653 50.000 0.00 0.00 44.79 3.02
3998 5205 3.244911 CCATACAGTGGGACCTTTTCTGT 60.245 47.826 12.86 12.86 44.79 3.41
3999 5206 4.019681 CCATACAGTGGGACCTTTTCTGTA 60.020 45.833 15.19 15.19 44.79 2.74
4000 5207 3.771577 ACAGTGGGACCTTTTCTGTAG 57.228 47.619 0.00 0.00 37.55 2.74
4001 5208 3.046374 ACAGTGGGACCTTTTCTGTAGT 58.954 45.455 0.00 0.00 37.55 2.73
4002 5209 4.228824 ACAGTGGGACCTTTTCTGTAGTA 58.771 43.478 0.00 0.00 37.55 1.82
4003 5210 4.040095 ACAGTGGGACCTTTTCTGTAGTAC 59.960 45.833 0.00 0.00 37.55 2.73
4004 5211 4.283722 CAGTGGGACCTTTTCTGTAGTACT 59.716 45.833 0.00 0.00 0.00 2.73
4005 5212 4.527427 AGTGGGACCTTTTCTGTAGTACTC 59.473 45.833 0.00 0.00 0.00 2.59
4006 5213 3.836562 TGGGACCTTTTCTGTAGTACTCC 59.163 47.826 0.00 0.00 0.00 3.85
4007 5214 3.836562 GGGACCTTTTCTGTAGTACTCCA 59.163 47.826 0.00 0.00 0.00 3.86
4008 5215 4.322574 GGGACCTTTTCTGTAGTACTCCAC 60.323 50.000 0.00 0.00 0.00 4.02
4009 5216 4.483311 GACCTTTTCTGTAGTACTCCACG 58.517 47.826 0.00 0.00 0.00 4.94
4010 5217 3.893813 ACCTTTTCTGTAGTACTCCACGT 59.106 43.478 0.00 0.00 0.00 4.49
4011 5218 4.343239 ACCTTTTCTGTAGTACTCCACGTT 59.657 41.667 0.00 0.00 0.00 3.99
4012 5219 5.536161 ACCTTTTCTGTAGTACTCCACGTTA 59.464 40.000 0.00 0.00 0.00 3.18
4013 5220 6.040842 ACCTTTTCTGTAGTACTCCACGTTAA 59.959 38.462 0.00 0.00 0.00 2.01
4014 5221 6.364435 CCTTTTCTGTAGTACTCCACGTTAAC 59.636 42.308 0.00 0.00 0.00 2.01
4015 5222 5.376854 TTCTGTAGTACTCCACGTTAACC 57.623 43.478 0.00 0.00 0.00 2.85
4016 5223 4.397420 TCTGTAGTACTCCACGTTAACCA 58.603 43.478 0.00 0.00 0.00 3.67
4017 5224 5.012239 TCTGTAGTACTCCACGTTAACCAT 58.988 41.667 0.00 0.00 0.00 3.55
4018 5225 5.477984 TCTGTAGTACTCCACGTTAACCATT 59.522 40.000 0.00 0.00 0.00 3.16
4019 5226 5.713025 TGTAGTACTCCACGTTAACCATTC 58.287 41.667 0.00 0.00 0.00 2.67
4020 5227 5.477984 TGTAGTACTCCACGTTAACCATTCT 59.522 40.000 0.00 0.00 0.00 2.40
4021 5228 5.479124 AGTACTCCACGTTAACCATTCTT 57.521 39.130 0.00 0.00 0.00 2.52
4022 5229 6.594788 AGTACTCCACGTTAACCATTCTTA 57.405 37.500 0.00 0.00 0.00 2.10
4023 5230 6.393171 AGTACTCCACGTTAACCATTCTTAC 58.607 40.000 0.00 0.00 0.00 2.34
4024 5231 5.217978 ACTCCACGTTAACCATTCTTACA 57.782 39.130 0.00 0.00 0.00 2.41
4025 5232 5.613329 ACTCCACGTTAACCATTCTTACAA 58.387 37.500 0.00 0.00 0.00 2.41
4026 5233 6.056884 ACTCCACGTTAACCATTCTTACAAA 58.943 36.000 0.00 0.00 0.00 2.83
4027 5234 6.543100 ACTCCACGTTAACCATTCTTACAAAA 59.457 34.615 0.00 0.00 0.00 2.44
4028 5235 7.229907 ACTCCACGTTAACCATTCTTACAAAAT 59.770 33.333 0.00 0.00 0.00 1.82
4029 5236 8.618702 TCCACGTTAACCATTCTTACAAAATA 57.381 30.769 0.00 0.00 0.00 1.40
4030 5237 9.233649 TCCACGTTAACCATTCTTACAAAATAT 57.766 29.630 0.00 0.00 0.00 1.28
4104 5311 8.498054 TTTTTCAAATACACTTTTCAATGGCA 57.502 26.923 0.00 0.00 0.00 4.92
4105 5312 7.475771 TTTCAAATACACTTTTCAATGGCAC 57.524 32.000 0.00 0.00 0.00 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 1.468520 CGAACTCCGTTGCATTTCCAT 59.531 47.619 0.00 0.00 0.00 3.41
173 174 6.372659 GCACCAGAAAATCCGTATATCATCAT 59.627 38.462 0.00 0.00 0.00 2.45
175 176 5.700832 TGCACCAGAAAATCCGTATATCATC 59.299 40.000 0.00 0.00 0.00 2.92
186 192 6.395426 TCAATCCATATGCACCAGAAAATC 57.605 37.500 0.00 0.00 0.00 2.17
367 468 5.070001 TGAAGCTATGCCTACAAAAACTGT 58.930 37.500 0.00 0.00 42.47 3.55
588 692 3.996363 GGTCAGATTTGTCAAATTTGCCC 59.004 43.478 19.26 15.63 34.12 5.36
589 693 4.886579 AGGTCAGATTTGTCAAATTTGCC 58.113 39.130 19.26 20.61 34.12 4.52
590 694 8.677300 TCTATAGGTCAGATTTGTCAAATTTGC 58.323 33.333 19.26 14.98 34.12 3.68
591 695 9.994432 GTCTATAGGTCAGATTTGTCAAATTTG 57.006 33.333 18.38 18.38 35.08 2.32
592 696 8.883731 CGTCTATAGGTCAGATTTGTCAAATTT 58.116 33.333 12.04 3.94 0.00 1.82
593 697 8.258007 TCGTCTATAGGTCAGATTTGTCAAATT 58.742 33.333 12.04 0.00 0.00 1.82
594 698 7.782049 TCGTCTATAGGTCAGATTTGTCAAAT 58.218 34.615 10.63 10.63 0.00 2.32
595 699 7.165460 TCGTCTATAGGTCAGATTTGTCAAA 57.835 36.000 0.00 0.00 0.00 2.69
596 700 6.769134 TCGTCTATAGGTCAGATTTGTCAA 57.231 37.500 0.00 0.00 0.00 3.18
597 701 6.769134 TTCGTCTATAGGTCAGATTTGTCA 57.231 37.500 0.00 0.00 0.00 3.58
598 702 7.921214 TGATTTCGTCTATAGGTCAGATTTGTC 59.079 37.037 0.00 0.00 0.00 3.18
599 703 7.782049 TGATTTCGTCTATAGGTCAGATTTGT 58.218 34.615 0.00 0.00 0.00 2.83
600 704 8.648557 TTGATTTCGTCTATAGGTCAGATTTG 57.351 34.615 0.00 0.00 0.00 2.32
601 705 9.838339 ATTTGATTTCGTCTATAGGTCAGATTT 57.162 29.630 0.00 0.00 0.00 2.17
602 706 9.482627 GATTTGATTTCGTCTATAGGTCAGATT 57.517 33.333 0.00 0.00 0.00 2.40
603 707 8.642432 TGATTTGATTTCGTCTATAGGTCAGAT 58.358 33.333 0.00 0.00 0.00 2.90
604 708 7.921214 GTGATTTGATTTCGTCTATAGGTCAGA 59.079 37.037 0.00 0.00 0.00 3.27
605 709 7.096436 CGTGATTTGATTTCGTCTATAGGTCAG 60.096 40.741 0.00 0.00 0.00 3.51
606 710 6.695713 CGTGATTTGATTTCGTCTATAGGTCA 59.304 38.462 0.00 0.00 0.00 4.02
607 711 6.144080 CCGTGATTTGATTTCGTCTATAGGTC 59.856 42.308 0.00 0.00 0.00 3.85
608 712 5.983720 CCGTGATTTGATTTCGTCTATAGGT 59.016 40.000 0.00 0.00 0.00 3.08
609 713 6.213677 TCCGTGATTTGATTTCGTCTATAGG 58.786 40.000 0.00 0.00 0.00 2.57
610 714 7.694388 TTCCGTGATTTGATTTCGTCTATAG 57.306 36.000 0.00 0.00 0.00 1.31
611 715 7.923878 TCATTCCGTGATTTGATTTCGTCTATA 59.076 33.333 0.00 0.00 0.00 1.31
612 716 6.761242 TCATTCCGTGATTTGATTTCGTCTAT 59.239 34.615 0.00 0.00 0.00 1.98
613 717 6.103330 TCATTCCGTGATTTGATTTCGTCTA 58.897 36.000 0.00 0.00 0.00 2.59
614 718 4.935205 TCATTCCGTGATTTGATTTCGTCT 59.065 37.500 0.00 0.00 0.00 4.18
615 719 5.216566 TCATTCCGTGATTTGATTTCGTC 57.783 39.130 0.00 0.00 0.00 4.20
616 720 5.181245 AGTTCATTCCGTGATTTGATTTCGT 59.819 36.000 0.00 0.00 36.54 3.85
617 721 5.509272 CAGTTCATTCCGTGATTTGATTTCG 59.491 40.000 0.00 0.00 36.54 3.46
618 722 5.287035 GCAGTTCATTCCGTGATTTGATTTC 59.713 40.000 0.00 0.00 36.54 2.17
619 723 5.163513 GCAGTTCATTCCGTGATTTGATTT 58.836 37.500 0.00 0.00 36.54 2.17
620 724 4.380867 GGCAGTTCATTCCGTGATTTGATT 60.381 41.667 0.00 0.00 36.54 2.57
621 725 3.129287 GGCAGTTCATTCCGTGATTTGAT 59.871 43.478 0.00 0.00 36.54 2.57
622 726 2.487762 GGCAGTTCATTCCGTGATTTGA 59.512 45.455 0.00 0.00 36.54 2.69
623 727 2.415893 GGGCAGTTCATTCCGTGATTTG 60.416 50.000 0.00 0.00 36.54 2.32
624 728 1.818674 GGGCAGTTCATTCCGTGATTT 59.181 47.619 0.00 0.00 36.54 2.17
625 729 1.463674 GGGCAGTTCATTCCGTGATT 58.536 50.000 0.00 0.00 36.54 2.57
626 730 0.744414 CGGGCAGTTCATTCCGTGAT 60.744 55.000 0.00 0.00 36.54 3.06
627 731 1.375396 CGGGCAGTTCATTCCGTGA 60.375 57.895 0.00 0.00 37.92 4.35
628 732 3.177600 CGGGCAGTTCATTCCGTG 58.822 61.111 0.00 0.00 37.92 4.94
630 734 0.953471 TTCACGGGCAGTTCATTCCG 60.953 55.000 0.00 0.00 46.95 4.30
631 735 1.068541 GTTTCACGGGCAGTTCATTCC 60.069 52.381 0.00 0.00 0.00 3.01
632 736 1.880027 AGTTTCACGGGCAGTTCATTC 59.120 47.619 0.00 0.00 0.00 2.67
633 737 1.981256 AGTTTCACGGGCAGTTCATT 58.019 45.000 0.00 0.00 0.00 2.57
634 738 2.851263 TAGTTTCACGGGCAGTTCAT 57.149 45.000 0.00 0.00 0.00 2.57
635 739 2.851263 ATAGTTTCACGGGCAGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
636 740 3.500680 TGAAATAGTTTCACGGGCAGTTC 59.499 43.478 1.24 0.00 44.21 3.01
637 741 3.482436 TGAAATAGTTTCACGGGCAGTT 58.518 40.909 1.24 0.00 44.21 3.16
638 742 3.134574 TGAAATAGTTTCACGGGCAGT 57.865 42.857 1.24 0.00 44.21 4.40
646 750 3.496884 GTCAGGCGTGTGAAATAGTTTCA 59.503 43.478 6.26 1.24 46.68 2.69
647 751 3.120304 GGTCAGGCGTGTGAAATAGTTTC 60.120 47.826 6.26 0.00 40.08 2.78
648 752 2.812011 GGTCAGGCGTGTGAAATAGTTT 59.188 45.455 6.26 0.00 0.00 2.66
649 753 2.423577 GGTCAGGCGTGTGAAATAGTT 58.576 47.619 6.26 0.00 0.00 2.24
650 754 1.338769 GGGTCAGGCGTGTGAAATAGT 60.339 52.381 6.26 0.00 0.00 2.12
651 755 1.066143 AGGGTCAGGCGTGTGAAATAG 60.066 52.381 6.26 0.00 0.00 1.73
652 756 0.981183 AGGGTCAGGCGTGTGAAATA 59.019 50.000 6.26 0.00 0.00 1.40
653 757 0.110486 AAGGGTCAGGCGTGTGAAAT 59.890 50.000 6.26 0.00 0.00 2.17
654 758 0.106918 AAAGGGTCAGGCGTGTGAAA 60.107 50.000 6.26 0.00 0.00 2.69
655 759 0.106918 AAAAGGGTCAGGCGTGTGAA 60.107 50.000 6.26 0.00 0.00 3.18
656 760 0.817634 CAAAAGGGTCAGGCGTGTGA 60.818 55.000 6.26 0.00 0.00 3.58
657 761 1.101049 ACAAAAGGGTCAGGCGTGTG 61.101 55.000 6.26 0.00 0.00 3.82
658 762 1.101049 CACAAAAGGGTCAGGCGTGT 61.101 55.000 6.26 0.00 0.00 4.49
659 763 1.101049 ACACAAAAGGGTCAGGCGTG 61.101 55.000 0.00 0.00 0.00 5.34
660 764 0.470766 TACACAAAAGGGTCAGGCGT 59.529 50.000 0.00 0.00 0.00 5.68
661 765 1.156736 CTACACAAAAGGGTCAGGCG 58.843 55.000 0.00 0.00 0.00 5.52
662 766 0.881796 GCTACACAAAAGGGTCAGGC 59.118 55.000 0.00 0.00 0.00 4.85
663 767 1.156736 CGCTACACAAAAGGGTCAGG 58.843 55.000 0.00 0.00 0.00 3.86
664 768 0.517316 GCGCTACACAAAAGGGTCAG 59.483 55.000 0.00 0.00 0.00 3.51
665 769 0.887387 GGCGCTACACAAAAGGGTCA 60.887 55.000 7.64 0.00 32.25 4.02
666 770 1.583495 GGGCGCTACACAAAAGGGTC 61.583 60.000 7.64 0.00 0.00 4.46
667 771 1.602605 GGGCGCTACACAAAAGGGT 60.603 57.895 7.64 0.00 0.00 4.34
668 772 2.686816 CGGGCGCTACACAAAAGGG 61.687 63.158 7.64 0.00 0.00 3.95
669 773 2.867472 CGGGCGCTACACAAAAGG 59.133 61.111 7.64 0.00 0.00 3.11
670 774 2.175811 GCGGGCGCTACACAAAAG 59.824 61.111 7.64 0.00 38.26 2.27
671 775 3.358707 GGCGGGCGCTACACAAAA 61.359 61.111 7.64 0.00 41.60 2.44
672 776 4.627801 TGGCGGGCGCTACACAAA 62.628 61.111 7.64 0.00 41.60 2.83
688 792 4.710695 TAGTGTGGCGCCGTCGTG 62.711 66.667 23.90 0.00 38.14 4.35
689 793 4.712425 GTAGTGTGGCGCCGTCGT 62.712 66.667 23.90 9.30 38.14 4.34
690 794 4.710695 TGTAGTGTGGCGCCGTCG 62.711 66.667 23.90 0.00 39.07 5.12
691 795 3.110178 GTGTAGTGTGGCGCCGTC 61.110 66.667 23.90 17.98 0.00 4.79
692 796 3.612681 AGTGTAGTGTGGCGCCGT 61.613 61.111 23.90 8.90 0.00 5.68
693 797 3.112075 CAGTGTAGTGTGGCGCCG 61.112 66.667 23.90 0.00 0.00 6.46
694 798 2.030562 ACAGTGTAGTGTGGCGCC 59.969 61.111 22.73 22.73 0.00 6.53
695 799 2.954753 GCACAGTGTAGTGTGGCGC 61.955 63.158 18.52 0.00 46.73 6.53
696 800 1.157257 TTGCACAGTGTAGTGTGGCG 61.157 55.000 18.52 0.00 46.73 5.69
697 801 0.307760 GTTGCACAGTGTAGTGTGGC 59.692 55.000 18.52 12.34 46.73 5.01
698 802 0.581529 CGTTGCACAGTGTAGTGTGG 59.418 55.000 18.52 1.81 46.73 4.17
700 804 1.157870 GGCGTTGCACAGTGTAGTGT 61.158 55.000 1.61 0.00 41.52 3.55
701 805 0.880278 AGGCGTTGCACAGTGTAGTG 60.880 55.000 1.61 0.00 42.37 2.74
702 806 0.600255 GAGGCGTTGCACAGTGTAGT 60.600 55.000 1.61 0.00 0.00 2.73
703 807 0.599991 TGAGGCGTTGCACAGTGTAG 60.600 55.000 1.61 0.00 0.00 2.74
704 808 0.878523 GTGAGGCGTTGCACAGTGTA 60.879 55.000 1.61 0.00 35.19 2.90
705 809 2.180204 GTGAGGCGTTGCACAGTGT 61.180 57.895 1.61 0.00 35.19 3.55
706 810 2.179547 TGTGAGGCGTTGCACAGTG 61.180 57.895 0.00 0.00 39.86 3.66
707 811 2.189257 TGTGAGGCGTTGCACAGT 59.811 55.556 0.00 0.00 39.86 3.55
709 813 0.320050 TATCTGTGAGGCGTTGCACA 59.680 50.000 0.00 0.00 42.25 4.57
710 814 1.002366 CTATCTGTGAGGCGTTGCAC 58.998 55.000 0.00 0.00 35.63 4.57
711 815 0.108186 CCTATCTGTGAGGCGTTGCA 60.108 55.000 0.00 0.00 0.00 4.08
712 816 2.682893 CCTATCTGTGAGGCGTTGC 58.317 57.895 0.00 0.00 0.00 4.17
718 822 1.032794 TGTAGCGCCTATCTGTGAGG 58.967 55.000 2.29 0.00 37.12 3.86
719 823 1.598183 CGTGTAGCGCCTATCTGTGAG 60.598 57.143 2.29 0.00 0.00 3.51
720 824 0.380733 CGTGTAGCGCCTATCTGTGA 59.619 55.000 2.29 0.00 0.00 3.58
721 825 0.595053 CCGTGTAGCGCCTATCTGTG 60.595 60.000 2.29 0.00 39.71 3.66
722 826 1.734137 CCGTGTAGCGCCTATCTGT 59.266 57.895 2.29 0.00 39.71 3.41
723 827 1.661821 GCCGTGTAGCGCCTATCTG 60.662 63.158 2.29 0.00 39.71 2.90
724 828 2.728817 GCCGTGTAGCGCCTATCT 59.271 61.111 2.29 0.00 39.71 1.98
725 829 2.355956 GGCCGTGTAGCGCCTATC 60.356 66.667 2.29 0.00 39.71 2.08
726 830 3.151710 TGGCCGTGTAGCGCCTAT 61.152 61.111 2.29 0.00 39.71 2.57
727 831 3.833645 CTGGCCGTGTAGCGCCTA 61.834 66.667 2.29 0.00 39.71 3.93
739 843 2.862674 TTTCGGGTATGACGCTGGCC 62.863 60.000 0.00 0.00 0.00 5.36
740 844 1.022451 TTTTCGGGTATGACGCTGGC 61.022 55.000 0.00 0.00 0.00 4.85
741 845 1.663695 ATTTTCGGGTATGACGCTGG 58.336 50.000 0.00 0.00 0.00 4.85
742 846 3.869246 AGTAATTTTCGGGTATGACGCTG 59.131 43.478 0.00 0.00 0.00 5.18
743 847 4.133013 AGTAATTTTCGGGTATGACGCT 57.867 40.909 0.00 0.00 0.00 5.07
744 848 5.971895 TTAGTAATTTTCGGGTATGACGC 57.028 39.130 0.00 0.00 0.00 5.19
745 849 7.741198 TGTTTTAGTAATTTTCGGGTATGACG 58.259 34.615 0.00 0.00 0.00 4.35
746 850 8.724229 ACTGTTTTAGTAATTTTCGGGTATGAC 58.276 33.333 0.00 0.00 38.04 3.06
747 851 8.723311 CACTGTTTTAGTAATTTTCGGGTATGA 58.277 33.333 0.00 0.00 37.60 2.15
748 852 8.508875 ACACTGTTTTAGTAATTTTCGGGTATG 58.491 33.333 0.00 0.00 37.60 2.39
749 853 8.508875 CACACTGTTTTAGTAATTTTCGGGTAT 58.491 33.333 0.00 0.00 37.60 2.73
750 854 7.520292 GCACACTGTTTTAGTAATTTTCGGGTA 60.520 37.037 0.00 0.00 37.60 3.69
751 855 6.731164 CACACTGTTTTAGTAATTTTCGGGT 58.269 36.000 0.00 0.00 37.60 5.28
752 856 5.627780 GCACACTGTTTTAGTAATTTTCGGG 59.372 40.000 0.00 0.00 37.60 5.14
753 857 6.202937 TGCACACTGTTTTAGTAATTTTCGG 58.797 36.000 0.00 0.00 37.60 4.30
754 858 6.129457 GCTGCACACTGTTTTAGTAATTTTCG 60.129 38.462 0.00 0.00 37.60 3.46
755 859 6.129457 CGCTGCACACTGTTTTAGTAATTTTC 60.129 38.462 0.00 0.00 37.60 2.29
756 860 5.685511 CGCTGCACACTGTTTTAGTAATTTT 59.314 36.000 0.00 0.00 37.60 1.82
757 861 5.212194 CGCTGCACACTGTTTTAGTAATTT 58.788 37.500 0.00 0.00 37.60 1.82
758 862 4.783242 CGCTGCACACTGTTTTAGTAATT 58.217 39.130 0.00 0.00 37.60 1.40
759 863 3.364964 GCGCTGCACACTGTTTTAGTAAT 60.365 43.478 0.00 0.00 37.60 1.89
760 864 2.032377 GCGCTGCACACTGTTTTAGTAA 60.032 45.455 0.00 0.00 37.60 2.24
761 865 1.529438 GCGCTGCACACTGTTTTAGTA 59.471 47.619 0.00 0.00 37.60 1.82
762 866 0.307760 GCGCTGCACACTGTTTTAGT 59.692 50.000 0.00 0.00 41.36 2.24
763 867 0.385974 GGCGCTGCACACTGTTTTAG 60.386 55.000 7.64 0.00 0.00 1.85
764 868 0.817634 AGGCGCTGCACACTGTTTTA 60.818 50.000 7.64 0.00 0.00 1.52
765 869 2.120909 AGGCGCTGCACACTGTTTT 61.121 52.632 7.64 0.00 0.00 2.43
766 870 2.516930 AGGCGCTGCACACTGTTT 60.517 55.556 7.64 0.00 0.00 2.83
767 871 3.282157 CAGGCGCTGCACACTGTT 61.282 61.111 7.64 0.00 0.00 3.16
768 872 4.240103 TCAGGCGCTGCACACTGT 62.240 61.111 7.64 0.00 32.92 3.55
769 873 3.420606 CTCAGGCGCTGCACACTG 61.421 66.667 7.64 4.89 0.00 3.66
770 874 3.586461 CTCTCAGGCGCTGCACACT 62.586 63.158 7.64 0.00 0.00 3.55
771 875 3.117171 CTCTCAGGCGCTGCACAC 61.117 66.667 7.64 0.00 0.00 3.82
773 877 3.362399 TAGCTCTCAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
774 878 3.070576 TAGCTCTCAGGCGCTGCA 61.071 61.111 7.64 0.00 37.05 4.41
775 879 2.279385 CTAGCTCTCAGGCGCTGC 60.279 66.667 7.64 2.66 37.05 5.25
776 880 2.416678 CCTAGCTCTCAGGCGCTG 59.583 66.667 7.64 3.67 37.05 5.18
786 890 6.528168 ACTGTATAGTTTGGCGCCTAGCTC 62.528 50.000 28.25 15.99 39.08 4.09
787 891 4.756450 ACTGTATAGTTTGGCGCCTAGCT 61.756 47.826 27.62 27.62 39.08 3.32
788 892 2.483188 ACTGTATAGTTTGGCGCCTAGC 60.483 50.000 29.70 22.73 38.57 3.42
789 893 3.123804 CACTGTATAGTTTGGCGCCTAG 58.876 50.000 29.70 13.13 34.07 3.02
790 894 2.740580 GCACTGTATAGTTTGGCGCCTA 60.741 50.000 29.70 19.10 34.07 3.93
791 895 2.012051 GCACTGTATAGTTTGGCGCCT 61.012 52.381 29.70 9.99 34.07 5.52
792 896 0.377203 GCACTGTATAGTTTGGCGCC 59.623 55.000 22.73 22.73 34.07 6.53
793 897 1.062587 CTGCACTGTATAGTTTGGCGC 59.937 52.381 0.00 0.00 34.07 6.53
794 898 1.062587 GCTGCACTGTATAGTTTGGCG 59.937 52.381 0.00 0.00 34.07 5.69
795 899 1.062587 CGCTGCACTGTATAGTTTGGC 59.937 52.381 0.00 0.00 34.07 4.52
796 900 1.062587 GCGCTGCACTGTATAGTTTGG 59.937 52.381 0.00 0.00 34.07 3.28
797 901 1.062587 GGCGCTGCACTGTATAGTTTG 59.937 52.381 7.64 0.00 34.07 2.93
798 902 1.066143 AGGCGCTGCACTGTATAGTTT 60.066 47.619 7.64 0.00 34.07 2.66
799 903 0.537188 AGGCGCTGCACTGTATAGTT 59.463 50.000 7.64 0.00 34.07 2.24
800 904 1.338337 CTAGGCGCTGCACTGTATAGT 59.662 52.381 7.64 0.00 37.75 2.12
801 905 1.932604 GCTAGGCGCTGCACTGTATAG 60.933 57.143 7.64 0.00 35.14 1.31
802 906 0.032130 GCTAGGCGCTGCACTGTATA 59.968 55.000 7.64 0.00 35.14 1.47
803 907 1.227380 GCTAGGCGCTGCACTGTAT 60.227 57.895 7.64 0.00 35.14 2.29
804 908 2.184322 GCTAGGCGCTGCACTGTA 59.816 61.111 7.64 0.00 35.14 2.74
816 920 4.530857 CAACGCCCGGGAGCTAGG 62.531 72.222 29.31 7.74 0.00 3.02
821 925 4.077184 TAGTGCAACGCCCGGGAG 62.077 66.667 29.31 26.57 45.86 4.30
822 926 4.077184 CTAGTGCAACGCCCGGGA 62.077 66.667 29.31 0.00 45.86 5.14
823 927 4.388499 ACTAGTGCAACGCCCGGG 62.388 66.667 19.09 19.09 45.86 5.73
824 928 3.118454 CACTAGTGCAACGCCCGG 61.118 66.667 10.54 0.00 45.86 5.73
834 938 0.605083 TCTCAGGTGCTGCACTAGTG 59.395 55.000 29.54 23.05 34.40 2.74
835 939 0.894141 CTCTCAGGTGCTGCACTAGT 59.106 55.000 29.54 13.81 34.40 2.57
836 940 0.459934 GCTCTCAGGTGCTGCACTAG 60.460 60.000 29.54 22.92 34.40 2.57
837 941 0.902048 AGCTCTCAGGTGCTGCACTA 60.902 55.000 29.54 15.76 40.25 2.74
838 942 0.902048 TAGCTCTCAGGTGCTGCACT 60.902 55.000 29.54 14.65 41.56 4.40
839 943 0.459934 CTAGCTCTCAGGTGCTGCAC 60.460 60.000 24.02 24.02 41.56 4.57
840 944 1.611474 CCTAGCTCTCAGGTGCTGCA 61.611 60.000 0.00 0.00 41.56 4.41
841 945 1.143620 CCTAGCTCTCAGGTGCTGC 59.856 63.158 0.00 0.00 41.56 5.25
842 946 1.143620 GCCTAGCTCTCAGGTGCTG 59.856 63.158 2.99 0.00 41.56 4.41
843 947 2.422231 CGCCTAGCTCTCAGGTGCT 61.422 63.158 1.68 0.00 43.49 4.40
844 948 2.105930 CGCCTAGCTCTCAGGTGC 59.894 66.667 1.68 0.00 36.90 5.01
845 949 2.105930 GCGCCTAGCTCTCAGGTG 59.894 66.667 9.81 9.81 44.90 4.00
855 959 4.514577 CTGACCCGTGGCGCCTAG 62.515 72.222 29.70 20.71 0.00 3.02
864 968 2.731691 ATTTCACGCAGCTGACCCGT 62.732 55.000 20.43 15.21 35.29 5.28
865 969 0.739462 TATTTCACGCAGCTGACCCG 60.739 55.000 20.43 14.47 0.00 5.28
866 970 1.009829 CTATTTCACGCAGCTGACCC 58.990 55.000 20.43 0.00 0.00 4.46
867 971 1.726853 ACTATTTCACGCAGCTGACC 58.273 50.000 20.43 0.00 0.00 4.02
868 972 3.186409 TCAAACTATTTCACGCAGCTGAC 59.814 43.478 20.43 8.06 0.00 3.51
869 973 3.186409 GTCAAACTATTTCACGCAGCTGA 59.814 43.478 20.43 0.00 0.00 4.26
870 974 3.482786 GTCAAACTATTTCACGCAGCTG 58.517 45.455 10.11 10.11 0.00 4.24
871 975 2.157668 CGTCAAACTATTTCACGCAGCT 59.842 45.455 0.00 0.00 0.00 4.24
872 976 2.495939 CGTCAAACTATTTCACGCAGC 58.504 47.619 0.00 0.00 0.00 5.25
873 977 2.734606 TCCGTCAAACTATTTCACGCAG 59.265 45.455 0.00 0.00 0.00 5.18
874 978 2.477375 GTCCGTCAAACTATTTCACGCA 59.523 45.455 0.00 0.00 0.00 5.24
875 979 2.477375 TGTCCGTCAAACTATTTCACGC 59.523 45.455 0.00 0.00 0.00 5.34
876 980 3.739300 ACTGTCCGTCAAACTATTTCACG 59.261 43.478 0.00 0.00 0.00 4.35
877 981 5.235616 TGAACTGTCCGTCAAACTATTTCAC 59.764 40.000 0.00 0.00 0.00 3.18
878 982 5.361427 TGAACTGTCCGTCAAACTATTTCA 58.639 37.500 0.00 0.00 0.00 2.69
879 983 5.917541 TGAACTGTCCGTCAAACTATTTC 57.082 39.130 0.00 0.00 0.00 2.17
880 984 6.710744 AGAATGAACTGTCCGTCAAACTATTT 59.289 34.615 0.00 0.00 0.00 1.40
881 985 6.147821 CAGAATGAACTGTCCGTCAAACTATT 59.852 38.462 0.00 0.00 39.69 1.73
882 986 5.639506 CAGAATGAACTGTCCGTCAAACTAT 59.360 40.000 0.00 0.00 39.69 2.12
883 987 4.988540 CAGAATGAACTGTCCGTCAAACTA 59.011 41.667 0.00 0.00 39.69 2.24
884 988 3.809832 CAGAATGAACTGTCCGTCAAACT 59.190 43.478 0.00 0.00 39.69 2.66
885 989 3.560068 ACAGAATGAACTGTCCGTCAAAC 59.440 43.478 0.00 0.00 46.36 2.93
886 990 3.804036 ACAGAATGAACTGTCCGTCAAA 58.196 40.909 0.00 0.00 46.36 2.69
887 991 3.469008 ACAGAATGAACTGTCCGTCAA 57.531 42.857 0.00 0.00 46.36 3.18
895 999 7.080099 ACGAAATCAAATCACAGAATGAACTG 58.920 34.615 0.00 0.00 41.93 3.16
896 1000 7.173907 AGACGAAATCAAATCACAGAATGAACT 59.826 33.333 0.00 0.00 41.93 3.01
897 1001 7.301054 AGACGAAATCAAATCACAGAATGAAC 58.699 34.615 0.00 0.00 41.93 3.18
898 1002 7.439157 AGACGAAATCAAATCACAGAATGAA 57.561 32.000 0.00 0.00 41.93 2.57
899 1003 8.722480 ATAGACGAAATCAAATCACAGAATGA 57.278 30.769 0.00 0.00 43.13 2.57
901 1005 9.265901 CCTATAGACGAAATCAAATCACAGAAT 57.734 33.333 0.00 0.00 0.00 2.40
902 1006 8.258007 ACCTATAGACGAAATCAAATCACAGAA 58.742 33.333 0.00 0.00 0.00 3.02
903 1007 7.782049 ACCTATAGACGAAATCAAATCACAGA 58.218 34.615 0.00 0.00 0.00 3.41
904 1008 7.706607 TGACCTATAGACGAAATCAAATCACAG 59.293 37.037 0.00 0.00 0.00 3.66
905 1009 7.552459 TGACCTATAGACGAAATCAAATCACA 58.448 34.615 0.00 0.00 0.00 3.58
906 1010 7.921214 TCTGACCTATAGACGAAATCAAATCAC 59.079 37.037 0.00 0.00 0.00 3.06
907 1011 8.007405 TCTGACCTATAGACGAAATCAAATCA 57.993 34.615 0.00 0.00 0.00 2.57
908 1012 9.482627 AATCTGACCTATAGACGAAATCAAATC 57.517 33.333 0.00 0.00 0.00 2.17
909 1013 9.838339 AAATCTGACCTATAGACGAAATCAAAT 57.162 29.630 0.00 0.00 0.00 2.32
910 1014 9.098355 CAAATCTGACCTATAGACGAAATCAAA 57.902 33.333 0.00 0.00 0.00 2.69
911 1015 8.258007 ACAAATCTGACCTATAGACGAAATCAA 58.742 33.333 0.00 0.00 0.00 2.57
912 1016 7.782049 ACAAATCTGACCTATAGACGAAATCA 58.218 34.615 0.00 0.00 0.00 2.57
913 1017 7.921214 TGACAAATCTGACCTATAGACGAAATC 59.079 37.037 0.00 0.00 0.00 2.17
914 1018 7.782049 TGACAAATCTGACCTATAGACGAAAT 58.218 34.615 0.00 0.00 0.00 2.17
915 1019 7.165460 TGACAAATCTGACCTATAGACGAAA 57.835 36.000 0.00 0.00 0.00 3.46
916 1020 6.769134 TGACAAATCTGACCTATAGACGAA 57.231 37.500 0.00 0.00 0.00 3.85
917 1021 6.769134 TTGACAAATCTGACCTATAGACGA 57.231 37.500 0.00 0.00 0.00 4.20
918 1022 8.425577 AATTTGACAAATCTGACCTATAGACG 57.574 34.615 13.68 0.00 0.00 4.18
919 1023 9.994432 CAAATTTGACAAATCTGACCTATAGAC 57.006 33.333 13.08 0.00 0.00 2.59
920 1024 8.677300 GCAAATTTGACAAATCTGACCTATAGA 58.323 33.333 22.31 0.00 0.00 1.98
921 1025 7.917505 GGCAAATTTGACAAATCTGACCTATAG 59.082 37.037 22.31 0.00 35.83 1.31
922 1026 7.395772 TGGCAAATTTGACAAATCTGACCTATA 59.604 33.333 24.47 0.00 44.72 1.31
923 1027 6.211184 TGGCAAATTTGACAAATCTGACCTAT 59.789 34.615 24.47 0.00 44.72 2.57
924 1028 5.538053 TGGCAAATTTGACAAATCTGACCTA 59.462 36.000 24.47 0.00 44.72 3.08
925 1029 4.344679 TGGCAAATTTGACAAATCTGACCT 59.655 37.500 24.47 0.00 44.72 3.85
926 1030 4.630111 TGGCAAATTTGACAAATCTGACC 58.370 39.130 24.47 15.52 44.72 4.02
935 1039 1.483827 TGGTTGCTGGCAAATTTGACA 59.516 42.857 24.92 24.92 45.70 3.58
936 1040 2.137523 CTGGTTGCTGGCAAATTTGAC 58.862 47.619 22.31 19.99 37.70 3.18
937 1041 1.540797 GCTGGTTGCTGGCAAATTTGA 60.541 47.619 22.31 0.69 37.70 2.69
938 1042 0.869730 GCTGGTTGCTGGCAAATTTG 59.130 50.000 14.03 14.03 37.70 2.32
939 1043 0.250424 GGCTGGTTGCTGGCAAATTT 60.250 50.000 9.67 0.00 42.39 1.82
940 1044 1.372307 GGCTGGTTGCTGGCAAATT 59.628 52.632 9.67 0.00 42.39 1.82
941 1045 2.586293 GGGCTGGTTGCTGGCAAAT 61.586 57.895 9.67 0.00 42.39 2.32
942 1046 3.233231 GGGCTGGTTGCTGGCAAA 61.233 61.111 9.67 0.00 42.39 3.68
2098 3205 3.058160 GCTGTGGCTGCCGTCAAT 61.058 61.111 14.98 0.00 35.22 2.57
3158 4265 7.494625 TGTCCGAAATAAATACATTCAGAGTCC 59.505 37.037 0.00 0.00 0.00 3.85
3189 4296 6.321717 GCATTACTGTGCAGCAAATTAAGTA 58.678 36.000 0.00 0.00 44.43 2.24
3297 4413 6.136071 GCAGATATTTGCGATATTTCACGTT 58.864 36.000 2.03 0.00 33.90 3.99
3314 4430 1.134699 CGACCACCACACTGCAGATAT 60.135 52.381 23.35 1.49 0.00 1.63
3316 4442 1.004560 CGACCACCACACTGCAGAT 60.005 57.895 23.35 4.88 0.00 2.90
3346 4472 0.613777 AAGGTGACCGATGACTTCCC 59.386 55.000 0.00 0.00 0.00 3.97
3371 4497 3.163467 GGCGAGACTACCCTGGTAATAT 58.837 50.000 0.00 0.00 0.00 1.28
3373 4499 1.342674 TGGCGAGACTACCCTGGTAAT 60.343 52.381 0.00 0.00 0.00 1.89
3374 4500 0.040058 TGGCGAGACTACCCTGGTAA 59.960 55.000 0.00 0.00 0.00 2.85
3376 4502 1.001760 ATGGCGAGACTACCCTGGT 59.998 57.895 0.00 0.00 0.00 4.00
3377 4503 1.330655 ACATGGCGAGACTACCCTGG 61.331 60.000 0.00 0.00 0.00 4.45
3378 4504 0.179100 CACATGGCGAGACTACCCTG 60.179 60.000 0.00 0.00 0.00 4.45
3379 4505 0.324368 TCACATGGCGAGACTACCCT 60.324 55.000 0.00 0.00 0.00 4.34
3381 4507 0.818296 AGTCACATGGCGAGACTACC 59.182 55.000 9.64 0.00 42.91 3.18
3384 4510 3.895232 ATTAAGTCACATGGCGAGACT 57.105 42.857 0.00 2.13 46.18 3.24
3385 4511 4.025647 GCTAATTAAGTCACATGGCGAGAC 60.026 45.833 0.00 0.00 35.62 3.36
3386 4512 4.119862 GCTAATTAAGTCACATGGCGAGA 58.880 43.478 0.00 0.00 0.00 4.04
3387 4513 4.122776 AGCTAATTAAGTCACATGGCGAG 58.877 43.478 0.00 0.00 0.00 5.03
3388 4514 4.137116 AGCTAATTAAGTCACATGGCGA 57.863 40.909 0.00 0.00 0.00 5.54
3389 4515 5.523916 AGTTAGCTAATTAAGTCACATGGCG 59.476 40.000 9.88 0.00 0.00 5.69
3390 4516 6.927294 AGTTAGCTAATTAAGTCACATGGC 57.073 37.500 9.88 0.00 0.00 4.40
3391 4517 7.066284 AGCAAGTTAGCTAATTAAGTCACATGG 59.934 37.037 9.88 0.00 44.50 3.66
3392 4518 7.978982 AGCAAGTTAGCTAATTAAGTCACATG 58.021 34.615 9.88 0.00 44.50 3.21
3422 4558 3.904800 TGGTCATACACTACATGGTGG 57.095 47.619 6.98 0.00 41.09 4.61
3442 4578 6.322931 TCATGTCATAGTCATACCCTGGTAT 58.677 40.000 2.92 2.92 41.49 2.73
3445 4581 4.835056 TCTCATGTCATAGTCATACCCTGG 59.165 45.833 0.00 0.00 0.00 4.45
3446 4582 6.602410 ATCTCATGTCATAGTCATACCCTG 57.398 41.667 0.00 0.00 0.00 4.45
3447 4583 6.519721 GCAATCTCATGTCATAGTCATACCCT 60.520 42.308 0.00 0.00 0.00 4.34
3448 4584 5.641209 GCAATCTCATGTCATAGTCATACCC 59.359 44.000 0.00 0.00 0.00 3.69
3449 4585 6.462500 AGCAATCTCATGTCATAGTCATACC 58.538 40.000 0.00 0.00 0.00 2.73
3450 4586 8.084684 TGTAGCAATCTCATGTCATAGTCATAC 58.915 37.037 0.00 0.00 0.00 2.39
3451 4587 8.181904 TGTAGCAATCTCATGTCATAGTCATA 57.818 34.615 0.00 0.00 0.00 2.15
3452 4588 7.059202 TGTAGCAATCTCATGTCATAGTCAT 57.941 36.000 0.00 0.00 0.00 3.06
3453 4589 6.469782 TGTAGCAATCTCATGTCATAGTCA 57.530 37.500 0.00 0.00 0.00 3.41
3455 4591 6.882656 ACTTGTAGCAATCTCATGTCATAGT 58.117 36.000 0.00 0.00 0.00 2.12
3456 4592 7.169476 CAGACTTGTAGCAATCTCATGTCATAG 59.831 40.741 0.00 0.00 38.12 2.23
3458 4594 5.816258 CAGACTTGTAGCAATCTCATGTCAT 59.184 40.000 0.00 0.00 38.12 3.06
3459 4595 5.047092 TCAGACTTGTAGCAATCTCATGTCA 60.047 40.000 0.00 0.00 38.12 3.58
3460 4596 5.414360 TCAGACTTGTAGCAATCTCATGTC 58.586 41.667 0.00 0.00 36.88 3.06
3462 4598 6.592994 TCTTTCAGACTTGTAGCAATCTCATG 59.407 38.462 0.00 0.00 0.00 3.07
3463 4599 6.705302 TCTTTCAGACTTGTAGCAATCTCAT 58.295 36.000 0.00 0.00 0.00 2.90
3464 4600 6.101650 TCTTTCAGACTTGTAGCAATCTCA 57.898 37.500 0.00 0.00 0.00 3.27
3467 4603 4.692625 TGCTCTTTCAGACTTGTAGCAATC 59.307 41.667 0.00 0.00 35.70 2.67
3468 4604 4.645535 TGCTCTTTCAGACTTGTAGCAAT 58.354 39.130 0.00 0.00 35.70 3.56
3470 4606 3.751479 TGCTCTTTCAGACTTGTAGCA 57.249 42.857 0.00 0.00 36.23 3.49
3471 4607 6.727824 TTTATGCTCTTTCAGACTTGTAGC 57.272 37.500 0.00 0.00 0.00 3.58
3536 4703 2.031595 TCAGATCTCGCTATCGCTTGTC 60.032 50.000 0.00 0.00 35.26 3.18
3537 4704 1.950216 TCAGATCTCGCTATCGCTTGT 59.050 47.619 0.00 0.00 35.26 3.16
3538 4705 2.695613 TCAGATCTCGCTATCGCTTG 57.304 50.000 0.00 0.00 35.26 4.01
3539 4706 3.254411 TGATTCAGATCTCGCTATCGCTT 59.746 43.478 0.00 0.00 35.26 4.68
3540 4707 2.816672 TGATTCAGATCTCGCTATCGCT 59.183 45.455 0.00 0.00 35.26 4.93
3541 4708 3.208915 TGATTCAGATCTCGCTATCGC 57.791 47.619 0.00 0.00 35.26 4.58
3542 4709 4.797868 GGAATGATTCAGATCTCGCTATCG 59.202 45.833 7.56 0.00 33.28 2.92
3543 4710 5.108517 GGGAATGATTCAGATCTCGCTATC 58.891 45.833 7.56 0.00 33.28 2.08
3544 4711 4.081198 GGGGAATGATTCAGATCTCGCTAT 60.081 45.833 7.56 0.00 33.28 2.97
3545 4712 3.259374 GGGGAATGATTCAGATCTCGCTA 59.741 47.826 7.56 0.00 33.28 4.26
3546 4713 2.038295 GGGGAATGATTCAGATCTCGCT 59.962 50.000 7.56 0.00 33.28 4.93
3547 4714 2.421619 GGGGAATGATTCAGATCTCGC 58.578 52.381 7.56 0.00 33.28 5.03
3548 4715 2.036475 ACGGGGAATGATTCAGATCTCG 59.964 50.000 7.56 3.86 33.28 4.04
3630 4833 6.527957 CGCATTTCCAATTTGTCTCATTTTC 58.472 36.000 0.00 0.00 0.00 2.29
3644 4847 1.603456 TCTCTTGTGCGCATTTCCAA 58.397 45.000 15.91 12.44 0.00 3.53
3658 4861 2.556766 CTCCTCCTTCCCCTTTCTCTT 58.443 52.381 0.00 0.00 0.00 2.85
3796 5000 3.411517 ACTCCCAATGCCTCCCGG 61.412 66.667 0.00 0.00 0.00 5.73
3797 5001 2.124570 CACTCCCAATGCCTCCCG 60.125 66.667 0.00 0.00 0.00 5.14
3798 5002 2.276740 CCACTCCCAATGCCTCCC 59.723 66.667 0.00 0.00 0.00 4.30
3799 5003 2.276740 CCCACTCCCAATGCCTCC 59.723 66.667 0.00 0.00 0.00 4.30
3801 5005 2.204291 TCCCCACTCCCAATGCCT 60.204 61.111 0.00 0.00 0.00 4.75
3805 5009 1.995626 CCGTCTCCCCACTCCCAAT 60.996 63.158 0.00 0.00 0.00 3.16
3806 5010 2.606519 CCGTCTCCCCACTCCCAA 60.607 66.667 0.00 0.00 0.00 4.12
3807 5011 3.899545 GACCGTCTCCCCACTCCCA 62.900 68.421 0.00 0.00 0.00 4.37
3808 5012 2.220786 TAGACCGTCTCCCCACTCCC 62.221 65.000 3.74 0.00 0.00 4.30
3809 5013 0.752376 CTAGACCGTCTCCCCACTCC 60.752 65.000 3.74 0.00 0.00 3.85
3810 5014 0.255318 TCTAGACCGTCTCCCCACTC 59.745 60.000 3.74 0.00 0.00 3.51
3811 5015 0.927767 ATCTAGACCGTCTCCCCACT 59.072 55.000 3.74 0.00 0.00 4.00
3812 5016 1.320507 GATCTAGACCGTCTCCCCAC 58.679 60.000 3.74 0.00 0.00 4.61
3813 5017 0.179026 CGATCTAGACCGTCTCCCCA 60.179 60.000 3.74 0.00 0.00 4.96
3814 5018 1.517210 GCGATCTAGACCGTCTCCCC 61.517 65.000 8.62 0.00 0.00 4.81
3818 5022 3.733806 CGGCGATCTAGACCGTCT 58.266 61.111 9.88 6.25 42.01 4.18
3884 5091 2.758852 TTTACTCCCGTCCCCTGCCT 62.759 60.000 0.00 0.00 0.00 4.75
3923 5130 5.610398 GGCCCTTTCTCATCAAAAGAAAAA 58.390 37.500 0.00 0.00 41.02 1.94
3924 5131 4.261994 CGGCCCTTTCTCATCAAAAGAAAA 60.262 41.667 0.00 0.00 41.02 2.29
3925 5132 3.255642 CGGCCCTTTCTCATCAAAAGAAA 59.744 43.478 0.00 0.00 39.72 2.52
3926 5133 2.819608 CGGCCCTTTCTCATCAAAAGAA 59.180 45.455 0.00 0.00 36.09 2.52
3927 5134 2.436417 CGGCCCTTTCTCATCAAAAGA 58.564 47.619 0.00 0.00 36.09 2.52
3928 5135 1.135286 GCGGCCCTTTCTCATCAAAAG 60.135 52.381 0.00 0.00 34.25 2.27
3929 5136 0.887933 GCGGCCCTTTCTCATCAAAA 59.112 50.000 0.00 0.00 0.00 2.44
3930 5137 0.965363 GGCGGCCCTTTCTCATCAAA 60.965 55.000 8.12 0.00 0.00 2.69
3931 5138 1.378514 GGCGGCCCTTTCTCATCAA 60.379 57.895 8.12 0.00 0.00 2.57
3932 5139 2.135903 TTGGCGGCCCTTTCTCATCA 62.136 55.000 17.97 0.00 0.00 3.07
3933 5140 1.378514 TTGGCGGCCCTTTCTCATC 60.379 57.895 17.97 0.00 0.00 2.92
3934 5141 1.678970 GTTGGCGGCCCTTTCTCAT 60.679 57.895 17.97 0.00 0.00 2.90
3935 5142 2.282180 GTTGGCGGCCCTTTCTCA 60.282 61.111 17.97 0.00 0.00 3.27
3936 5143 1.250840 ATTGTTGGCGGCCCTTTCTC 61.251 55.000 17.97 1.19 0.00 2.87
3937 5144 0.831711 AATTGTTGGCGGCCCTTTCT 60.832 50.000 17.97 0.00 0.00 2.52
3938 5145 0.670239 CAATTGTTGGCGGCCCTTTC 60.670 55.000 17.97 4.80 0.00 2.62
3939 5146 1.370810 CAATTGTTGGCGGCCCTTT 59.629 52.632 17.97 0.00 0.00 3.11
3940 5147 2.582493 CCAATTGTTGGCGGCCCTT 61.582 57.895 17.97 0.00 45.17 3.95
3941 5148 2.996734 CCAATTGTTGGCGGCCCT 60.997 61.111 17.97 0.00 45.17 5.19
3949 5156 4.096984 GCCTCTACTTGGATCCAATTGTTG 59.903 45.833 27.20 21.09 35.20 3.33
3950 5157 4.273318 GCCTCTACTTGGATCCAATTGTT 58.727 43.478 27.20 14.09 35.20 2.83
3951 5158 3.682718 CGCCTCTACTTGGATCCAATTGT 60.683 47.826 27.20 23.00 35.20 2.71
3952 5159 2.874701 CGCCTCTACTTGGATCCAATTG 59.125 50.000 27.20 18.60 35.20 2.32
3953 5160 2.158755 CCGCCTCTACTTGGATCCAATT 60.159 50.000 27.20 23.31 35.20 2.32
3954 5161 1.417890 CCGCCTCTACTTGGATCCAAT 59.582 52.381 27.20 18.49 35.20 3.16
3955 5162 0.830648 CCGCCTCTACTTGGATCCAA 59.169 55.000 25.53 25.53 0.00 3.53
3956 5163 1.048724 CCCGCCTCTACTTGGATCCA 61.049 60.000 11.44 11.44 0.00 3.41
3957 5164 1.749033 CCCGCCTCTACTTGGATCC 59.251 63.158 4.20 4.20 0.00 3.36
3958 5165 1.069935 GCCCGCCTCTACTTGGATC 59.930 63.158 0.00 0.00 0.00 3.36
3959 5166 2.444256 GGCCCGCCTCTACTTGGAT 61.444 63.158 0.00 0.00 0.00 3.41
3960 5167 3.081409 GGCCCGCCTCTACTTGGA 61.081 66.667 0.00 0.00 0.00 3.53
3961 5168 1.407656 TATGGCCCGCCTCTACTTGG 61.408 60.000 7.35 0.00 36.94 3.61
3962 5169 0.249911 GTATGGCCCGCCTCTACTTG 60.250 60.000 7.35 0.00 36.94 3.16
3963 5170 0.689745 TGTATGGCCCGCCTCTACTT 60.690 55.000 7.35 0.00 36.94 2.24
3964 5171 1.075525 TGTATGGCCCGCCTCTACT 60.076 57.895 7.35 0.00 36.94 2.57
3965 5172 1.367840 CTGTATGGCCCGCCTCTAC 59.632 63.158 7.35 9.21 36.94 2.59
3966 5173 1.075525 ACTGTATGGCCCGCCTCTA 60.076 57.895 7.35 0.00 36.94 2.43
3967 5174 2.365635 ACTGTATGGCCCGCCTCT 60.366 61.111 7.35 0.00 36.94 3.69
3968 5175 2.203070 CACTGTATGGCCCGCCTC 60.203 66.667 7.35 0.00 36.94 4.70
3969 5176 3.797353 CCACTGTATGGCCCGCCT 61.797 66.667 7.35 0.00 43.24 5.52
3977 5184 4.021102 ACAGAAAAGGTCCCACTGTATG 57.979 45.455 0.00 0.00 39.52 2.39
3978 5185 4.844655 ACTACAGAAAAGGTCCCACTGTAT 59.155 41.667 0.00 0.00 41.19 2.29
3979 5186 4.228824 ACTACAGAAAAGGTCCCACTGTA 58.771 43.478 0.00 0.00 41.17 2.74
3980 5187 3.046374 ACTACAGAAAAGGTCCCACTGT 58.954 45.455 0.00 0.00 42.94 3.55
3981 5188 3.771577 ACTACAGAAAAGGTCCCACTG 57.228 47.619 0.00 0.00 35.14 3.66
3982 5189 4.490706 AGTACTACAGAAAAGGTCCCACT 58.509 43.478 0.00 0.00 0.00 4.00
3983 5190 4.322574 GGAGTACTACAGAAAAGGTCCCAC 60.323 50.000 0.00 0.00 0.00 4.61
3984 5191 3.836562 GGAGTACTACAGAAAAGGTCCCA 59.163 47.826 0.00 0.00 0.00 4.37
3985 5192 3.836562 TGGAGTACTACAGAAAAGGTCCC 59.163 47.826 2.78 0.00 0.00 4.46
3986 5193 4.617762 CGTGGAGTACTACAGAAAAGGTCC 60.618 50.000 8.44 0.00 0.00 4.46
3987 5194 4.022503 ACGTGGAGTACTACAGAAAAGGTC 60.023 45.833 8.44 0.00 0.00 3.85
3988 5195 3.893813 ACGTGGAGTACTACAGAAAAGGT 59.106 43.478 8.44 0.00 0.00 3.50
3989 5196 4.516365 ACGTGGAGTACTACAGAAAAGG 57.484 45.455 8.44 0.00 0.00 3.11
3990 5197 6.364435 GGTTAACGTGGAGTACTACAGAAAAG 59.636 42.308 8.44 0.63 0.00 2.27
3991 5198 6.183360 TGGTTAACGTGGAGTACTACAGAAAA 60.183 38.462 8.44 0.00 0.00 2.29
3992 5199 5.301551 TGGTTAACGTGGAGTACTACAGAAA 59.698 40.000 8.44 0.00 0.00 2.52
3993 5200 4.826733 TGGTTAACGTGGAGTACTACAGAA 59.173 41.667 8.44 0.00 0.00 3.02
3994 5201 4.397420 TGGTTAACGTGGAGTACTACAGA 58.603 43.478 8.44 0.00 0.00 3.41
3995 5202 4.771590 TGGTTAACGTGGAGTACTACAG 57.228 45.455 8.44 5.54 0.00 2.74
3996 5203 5.477984 AGAATGGTTAACGTGGAGTACTACA 59.522 40.000 2.78 2.78 0.00 2.74
3997 5204 5.958955 AGAATGGTTAACGTGGAGTACTAC 58.041 41.667 0.00 0.00 0.00 2.73
3998 5205 6.594788 AAGAATGGTTAACGTGGAGTACTA 57.405 37.500 0.00 0.00 0.00 1.82
3999 5206 5.479124 AAGAATGGTTAACGTGGAGTACT 57.521 39.130 0.00 0.00 0.00 2.73
4000 5207 6.158598 TGTAAGAATGGTTAACGTGGAGTAC 58.841 40.000 0.00 0.00 0.00 2.73
4001 5208 6.343716 TGTAAGAATGGTTAACGTGGAGTA 57.656 37.500 0.00 0.00 0.00 2.59
4002 5209 5.217978 TGTAAGAATGGTTAACGTGGAGT 57.782 39.130 0.00 0.00 0.00 3.85
4003 5210 6.548441 TTTGTAAGAATGGTTAACGTGGAG 57.452 37.500 0.00 0.00 0.00 3.86
4004 5211 6.939132 TTTTGTAAGAATGGTTAACGTGGA 57.061 33.333 0.00 0.00 0.00 4.02
4079 5286 8.394121 GTGCCATTGAAAAGTGTATTTGAAAAA 58.606 29.630 0.00 0.00 0.00 1.94
4080 5287 7.550551 TGTGCCATTGAAAAGTGTATTTGAAAA 59.449 29.630 0.00 0.00 0.00 2.29
4081 5288 7.044181 TGTGCCATTGAAAAGTGTATTTGAAA 58.956 30.769 0.00 0.00 0.00 2.69
4082 5289 6.577103 TGTGCCATTGAAAAGTGTATTTGAA 58.423 32.000 0.00 0.00 0.00 2.69
4083 5290 6.154203 TGTGCCATTGAAAAGTGTATTTGA 57.846 33.333 0.00 0.00 0.00 2.69
4084 5291 8.434661 GTTATGTGCCATTGAAAAGTGTATTTG 58.565 33.333 0.00 0.00 0.00 2.32
4085 5292 8.147058 TGTTATGTGCCATTGAAAAGTGTATTT 58.853 29.630 0.00 0.00 0.00 1.40
4086 5293 7.665690 TGTTATGTGCCATTGAAAAGTGTATT 58.334 30.769 0.00 0.00 0.00 1.89
4087 5294 7.225784 TGTTATGTGCCATTGAAAAGTGTAT 57.774 32.000 0.00 0.00 0.00 2.29
4088 5295 6.641169 TGTTATGTGCCATTGAAAAGTGTA 57.359 33.333 0.00 0.00 0.00 2.90
4089 5296 5.528043 TGTTATGTGCCATTGAAAAGTGT 57.472 34.783 0.00 0.00 0.00 3.55
4090 5297 7.424227 AAATGTTATGTGCCATTGAAAAGTG 57.576 32.000 0.00 0.00 31.89 3.16
4091 5298 8.449251 AAAAATGTTATGTGCCATTGAAAAGT 57.551 26.923 0.00 0.00 31.89 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.