Multiple sequence alignment - TraesCS3A01G009400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G009400 chr3A 100.000 7289 0 0 1 7289 8587220 8594508 0.000000e+00 13461.0
1 TraesCS3A01G009400 chr3A 85.490 572 52 18 3138 3706 299529209 299529752 1.060000e-157 568.0
2 TraesCS3A01G009400 chr3A 89.873 79 8 0 4677 4755 30162353 30162275 1.290000e-17 102.0
3 TraesCS3A01G009400 chr3D 93.615 4761 183 46 1937 6683 930557 925904 0.000000e+00 6996.0
4 TraesCS3A01G009400 chr3D 91.036 1930 114 22 1 1918 932722 930840 0.000000e+00 2551.0
5 TraesCS3A01G009400 chr3B 90.762 2652 144 51 4160 6777 5583649 5586233 0.000000e+00 3446.0
6 TraesCS3A01G009400 chr3B 95.518 1852 64 12 2175 4014 5581432 5583276 0.000000e+00 2942.0
7 TraesCS3A01G009400 chr3B 91.924 842 44 11 1138 1969 5580519 5581346 0.000000e+00 1157.0
8 TraesCS3A01G009400 chr3B 87.759 482 30 20 678 1145 5580118 5580584 2.990000e-148 536.0
9 TraesCS3A01G009400 chr3B 92.593 135 10 0 7019 7153 798537471 798537337 2.070000e-45 195.0
10 TraesCS3A01G009400 chr3B 92.708 96 4 2 1996 2090 5581340 5581433 1.280000e-27 135.0
11 TraesCS3A01G009400 chr3B 90.217 92 6 1 6863 6954 5586331 5586419 4.620000e-22 117.0
12 TraesCS3A01G009400 chr7D 91.061 1790 116 28 2986 4755 12901089 12902854 0.000000e+00 2379.0
13 TraesCS3A01G009400 chr7D 89.501 781 54 14 5071 5836 12903641 12904408 0.000000e+00 963.0
14 TraesCS3A01G009400 chr7D 87.032 802 63 24 5823 6616 12904508 12905276 0.000000e+00 867.0
15 TraesCS3A01G009400 chr7D 86.189 782 73 14 1140 1918 12897859 12898608 0.000000e+00 813.0
16 TraesCS3A01G009400 chr7D 88.073 545 51 10 2153 2694 12899040 12899573 1.030000e-177 634.0
17 TraesCS3A01G009400 chr7D 87.640 267 24 5 4814 5074 12902967 12903230 1.190000e-77 302.0
18 TraesCS3A01G009400 chr7D 97.674 86 2 0 2742 2827 12899580 12899665 1.640000e-31 148.0
19 TraesCS3A01G009400 chr7B 92.007 1614 95 18 2986 4586 366046611 366048203 0.000000e+00 2235.0
20 TraesCS3A01G009400 chr7B 88.207 1043 76 26 4815 5836 366051905 366052921 0.000000e+00 1201.0
21 TraesCS3A01G009400 chr7B 87.516 801 58 25 5823 6616 366053013 366053778 0.000000e+00 887.0
22 TraesCS3A01G009400 chr7B 86.890 717 62 11 1206 1918 366040457 366041145 0.000000e+00 774.0
23 TraesCS3A01G009400 chr7B 87.477 551 55 9 2153 2701 366041573 366042111 2.230000e-174 623.0
24 TraesCS3A01G009400 chr7B 90.055 181 18 0 4575 4755 366051612 366051792 1.220000e-57 235.0
25 TraesCS3A01G009400 chr7B 98.214 56 1 0 2772 2827 366042099 366042154 1.670000e-16 99.0
26 TraesCS3A01G009400 chr7A 91.066 1623 113 15 3142 4755 409257553 409259152 0.000000e+00 2165.0
27 TraesCS3A01G009400 chr7A 89.043 721 58 11 5903 6616 409262977 409263683 0.000000e+00 874.0
28 TraesCS3A01G009400 chr7A 91.779 596 36 6 5080 5664 409259616 409260209 0.000000e+00 817.0
29 TraesCS3A01G009400 chr7A 88.321 685 63 11 2153 2831 409254973 409255646 0.000000e+00 806.0
30 TraesCS3A01G009400 chr7A 87.183 671 63 8 1248 1918 409253897 409254544 0.000000e+00 741.0
31 TraesCS3A01G009400 chr7A 87.218 266 25 4 4815 5074 409259265 409259527 1.990000e-75 294.0
32 TraesCS3A01G009400 chr7A 92.045 176 9 3 2986 3156 409257134 409257309 7.310000e-60 243.0
33 TraesCS3A01G009400 chr7A 87.662 154 12 3 5683 5836 409262672 409262818 9.720000e-39 172.0
34 TraesCS3A01G009400 chr1A 77.825 469 86 12 93 559 132410812 132410360 2.590000e-69 274.0
35 TraesCS3A01G009400 chr1A 90.291 103 10 0 4653 4755 544136501 544136603 1.280000e-27 135.0
36 TraesCS3A01G009400 chr5A 77.754 472 84 13 93 560 651861349 651861803 3.350000e-68 270.0
37 TraesCS3A01G009400 chr5A 91.406 128 11 0 7021 7148 54638386 54638259 7.520000e-40 176.0
38 TraesCS3A01G009400 chr6A 95.588 136 6 0 7018 7153 149859974 149859839 1.230000e-52 219.0
39 TraesCS3A01G009400 chr2A 80.876 251 44 3 93 343 651091585 651091831 2.070000e-45 195.0
40 TraesCS3A01G009400 chr2A 89.908 109 10 1 4648 4755 517067368 517067260 9.860000e-29 139.0
41 TraesCS3A01G009400 chr2A 79.375 160 24 8 5834 5988 772453983 772453828 3.600000e-18 104.0
42 TraesCS3A01G009400 chr6D 94.444 108 5 1 7017 7123 436923302 436923195 1.630000e-36 165.0
43 TraesCS3A01G009400 chr2B 87.591 137 14 3 7020 7155 65145638 65145504 9.790000e-34 156.0
44 TraesCS3A01G009400 chr5B 94.059 101 6 0 7020 7120 412683955 412684055 3.520000e-33 154.0
45 TraesCS3A01G009400 chr6B 93.939 99 6 0 7022 7120 687365217 687365315 4.560000e-32 150.0
46 TraesCS3A01G009400 chr5D 90.476 105 9 1 4651 4755 223521112 223521009 3.550000e-28 137.0
47 TraesCS3A01G009400 chr2D 95.890 73 3 0 7022 7094 608481480 608481552 1.280000e-22 119.0
48 TraesCS3A01G009400 chr2D 91.667 60 3 2 5842 5900 534431302 534431360 1.690000e-11 82.4
49 TraesCS3A01G009400 chr1B 85.393 89 9 4 5904 5991 579780731 579780646 1.010000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G009400 chr3A 8587220 8594508 7288 False 13461.000000 13461 100.000000 1 7289 1 chr3A.!!$F1 7288
1 TraesCS3A01G009400 chr3A 299529209 299529752 543 False 568.000000 568 85.490000 3138 3706 1 chr3A.!!$F2 568
2 TraesCS3A01G009400 chr3D 925904 932722 6818 True 4773.500000 6996 92.325500 1 6683 2 chr3D.!!$R1 6682
3 TraesCS3A01G009400 chr3B 5580118 5586419 6301 False 1388.833333 3446 91.481333 678 6954 6 chr3B.!!$F1 6276
4 TraesCS3A01G009400 chr7D 12897859 12905276 7417 False 872.285714 2379 89.595714 1140 6616 7 chr7D.!!$F1 5476
5 TraesCS3A01G009400 chr7B 366046611 366053778 7167 False 1139.500000 2235 89.446250 2986 6616 4 chr7B.!!$F2 3630
6 TraesCS3A01G009400 chr7B 366040457 366042154 1697 False 498.666667 774 90.860333 1206 2827 3 chr7B.!!$F1 1621
7 TraesCS3A01G009400 chr7A 409253897 409263683 9786 False 764.000000 2165 89.289625 1248 6616 8 chr7A.!!$F1 5368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
379 383 0.034059 AGGTCTGACGTTTGCTCAGG 59.966 55.000 1.07 0.00 36.55 3.86 F
636 640 0.606401 TTGGAAAGGAAGGCGAGCAG 60.606 55.000 0.00 0.00 0.00 4.24 F
1254 1273 1.258445 ACCAGCCTCAGTACTTCGGG 61.258 60.000 8.81 5.51 0.00 5.14 F
1836 1873 1.694150 TCTCTGCAAGTGCTAGTTGGT 59.306 47.619 4.69 0.00 42.66 3.67 F
2029 2338 3.009115 AGGCACACCGGTAGGCAT 61.009 61.111 27.20 19.92 42.76 4.40 F
3055 4746 3.199946 TGGTCTCTCCACTGTTGTTCTTT 59.800 43.478 0.00 0.00 41.93 2.52 F
3743 5705 2.434702 GGAGGGTCGTGATAATGTCCTT 59.565 50.000 0.00 0.00 0.00 3.36 F
4640 10318 0.322277 CCACTGATGTTCTGCCTGCT 60.322 55.000 0.00 0.00 0.00 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1988 2297 1.039856 ACTGCGCAAAAGGGTTCATT 58.960 45.000 13.05 0.0 0.00 2.57 R
2123 2432 1.885790 GCTCTTGCAAAGCTTCTCCCT 60.886 52.381 19.77 0.0 45.70 4.20 R
2711 3028 1.806542 CCTTGCGTGATAAAGTGCTGT 59.193 47.619 0.00 0.0 0.00 4.40 R
2947 4455 2.590007 CACCATAGAGGCAGGCGC 60.590 66.667 0.00 0.0 43.14 6.53 R
3118 4810 3.199880 ACAACTGAGAGAACCACCAAG 57.800 47.619 0.00 0.0 0.00 3.61 R
4621 10299 0.322277 AGCAGGCAGAACATCAGTGG 60.322 55.000 0.00 0.0 0.00 4.00 R
4999 10740 0.329596 GGATGGATACCTCATGGGGC 59.670 60.000 13.00 0.0 40.03 5.80 R
6397 15139 0.616395 TCATCGACCCTGCACCCTAA 60.616 55.000 0.00 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
106 109 9.956720 GAATTAATCAAGACCATATTTGTGAGG 57.043 33.333 0.00 0.00 0.00 3.86
108 111 8.506168 TTAATCAAGACCATATTTGTGAGGAC 57.494 34.615 0.00 0.00 0.00 3.85
124 127 6.064060 TGTGAGGACAAAATTGATCAAGACT 58.936 36.000 14.54 4.01 0.00 3.24
140 143 2.551270 AGACTAGCCATCCTCCAACAA 58.449 47.619 0.00 0.00 0.00 2.83
157 160 8.846211 CCTCCAACAAAGAGAAACTTGTATTTA 58.154 33.333 0.00 0.00 38.98 1.40
167 170 7.755822 AGAGAAACTTGTATTTACAGCTACTCG 59.244 37.037 0.00 0.00 37.52 4.18
168 171 6.812160 AGAAACTTGTATTTACAGCTACTCGG 59.188 38.462 0.00 0.00 37.52 4.63
171 174 4.282950 TGTATTTACAGCTACTCGGTCG 57.717 45.455 0.00 0.00 0.00 4.79
202 205 2.288518 GCGCCCCTTTACATGTTTTCAA 60.289 45.455 2.30 0.00 0.00 2.69
204 207 4.381079 GCGCCCCTTTACATGTTTTCAATA 60.381 41.667 2.30 0.00 0.00 1.90
219 222 7.463544 TGTTTTCAATATGCATTAGTCAGACG 58.536 34.615 3.54 0.00 0.00 4.18
226 229 7.875316 ATATGCATTAGTCAGACGTTGATAC 57.125 36.000 3.54 0.00 38.29 2.24
233 236 5.906113 AGTCAGACGTTGATACTGAATCT 57.094 39.130 5.56 0.00 41.31 2.40
239 242 9.302345 TCAGACGTTGATACTGAATCTTAATTC 57.698 33.333 1.70 0.00 41.48 2.17
240 243 8.543774 CAGACGTTGATACTGAATCTTAATTCC 58.456 37.037 0.00 0.00 40.57 3.01
279 282 0.310543 TGATCTTGCGCACAACCAAC 59.689 50.000 11.12 0.00 0.00 3.77
280 283 0.310543 GATCTTGCGCACAACCAACA 59.689 50.000 11.12 0.00 0.00 3.33
282 285 0.528017 TCTTGCGCACAACCAACAAA 59.472 45.000 11.12 0.00 0.00 2.83
283 286 1.067565 TCTTGCGCACAACCAACAAAA 60.068 42.857 11.12 0.00 0.00 2.44
284 287 1.060409 CTTGCGCACAACCAACAAAAC 59.940 47.619 11.12 0.00 0.00 2.43
285 288 0.038251 TGCGCACAACCAACAAAACA 60.038 45.000 5.66 0.00 0.00 2.83
286 289 0.644843 GCGCACAACCAACAAAACAG 59.355 50.000 0.30 0.00 0.00 3.16
288 291 1.403514 CGCACAACCAACAAAACAGGT 60.404 47.619 0.00 0.00 37.20 4.00
289 292 2.267426 GCACAACCAACAAAACAGGTC 58.733 47.619 0.00 0.00 33.74 3.85
290 293 2.353208 GCACAACCAACAAAACAGGTCA 60.353 45.455 0.00 0.00 33.74 4.02
291 294 3.862642 GCACAACCAACAAAACAGGTCAA 60.863 43.478 0.00 0.00 33.74 3.18
292 295 3.925913 CACAACCAACAAAACAGGTCAAG 59.074 43.478 0.00 0.00 33.74 3.02
310 313 1.219935 GGTAATCGACCGCCACCTT 59.780 57.895 0.00 0.00 38.87 3.50
369 373 7.129109 TGAAAGCTAATTTTAAGGTCTGACG 57.871 36.000 1.07 0.00 0.00 4.35
378 382 1.871080 AAGGTCTGACGTTTGCTCAG 58.129 50.000 9.75 0.00 37.14 3.35
379 383 0.034059 AGGTCTGACGTTTGCTCAGG 59.966 55.000 1.07 0.00 36.55 3.86
403 407 5.349809 ACGCTGAAAGTAAGAGTTATAGCC 58.650 41.667 0.00 0.00 35.30 3.93
410 414 6.770746 AAGTAAGAGTTATAGCCGTTGAGA 57.229 37.500 0.00 0.00 0.00 3.27
419 423 1.583054 AGCCGTTGAGACTTGTTCAC 58.417 50.000 0.00 0.00 0.00 3.18
423 427 1.187271 CGTTGAGACTTGTTCACGTCG 59.813 52.381 4.31 0.00 35.38 5.12
428 432 2.601763 GAGACTTGTTCACGTCGTGTTT 59.398 45.455 23.82 0.00 35.38 2.83
435 439 5.073192 TGTTCACGTCGTGTTTCATAAAG 57.927 39.130 23.82 0.00 34.79 1.85
437 441 5.051307 TGTTCACGTCGTGTTTCATAAAGAG 60.051 40.000 23.82 0.00 34.79 2.85
445 449 7.474332 CGTCGTGTTTCATAAAGAGTAATTGTG 59.526 37.037 0.00 0.00 0.00 3.33
472 476 5.762179 TGGCATATTGTAGAATAGGGAGG 57.238 43.478 6.44 0.00 0.00 4.30
478 482 1.009060 TGTAGAATAGGGAGGCCACCA 59.991 52.381 21.72 1.00 0.00 4.17
529 533 4.676546 TCTGCAATCTGATCGTTCTACTG 58.323 43.478 0.00 0.00 0.00 2.74
532 536 4.100035 TGCAATCTGATCGTTCTACTGGAT 59.900 41.667 0.00 0.00 0.00 3.41
536 540 2.021457 TGATCGTTCTACTGGATGCGA 58.979 47.619 0.00 0.00 36.64 5.10
544 548 4.670896 TCTACTGGATGCGATCAATCAA 57.329 40.909 7.49 0.00 0.00 2.57
562 566 6.585702 TCAATCAAAATAGCCAACATGTTTCG 59.414 34.615 8.77 3.09 0.00 3.46
577 581 4.364415 TGTTTCGGTTCTTTTTGACAGG 57.636 40.909 0.00 0.00 0.00 4.00
578 582 4.011023 TGTTTCGGTTCTTTTTGACAGGA 58.989 39.130 0.00 0.00 0.00 3.86
579 583 4.642885 TGTTTCGGTTCTTTTTGACAGGAT 59.357 37.500 0.00 0.00 0.00 3.24
580 584 4.829064 TTCGGTTCTTTTTGACAGGATG 57.171 40.909 0.00 0.00 46.00 3.51
620 624 3.093278 GTGGAGCTCGCGATTTGG 58.907 61.111 10.36 0.00 0.00 3.28
636 640 0.606401 TTGGAAAGGAAGGCGAGCAG 60.606 55.000 0.00 0.00 0.00 4.24
672 676 2.590575 CACCCGTGCGAACCACTT 60.591 61.111 0.00 0.00 42.42 3.16
702 707 3.766051 AGCTAATTGGGCTTTCCTTTGAG 59.234 43.478 2.53 0.00 36.56 3.02
734 739 2.603776 AGTCCGGCCCGTTCTCTT 60.604 61.111 0.85 0.00 0.00 2.85
770 780 1.671054 CGTCCTTGGACGCCACAAT 60.671 57.895 25.93 0.00 41.77 2.71
774 784 1.526575 CCTTGGACGCCACAATTGCT 61.527 55.000 5.05 0.00 30.78 3.91
816 832 3.309506 AGACTGCGTGCTCTGCCT 61.310 61.111 0.00 0.00 0.00 4.75
855 871 4.891727 CCGCCGGGTCAAGGATCG 62.892 72.222 2.18 0.00 0.00 3.69
953 969 3.009115 ATAGCGGGGCTGGTGTGT 61.009 61.111 0.00 0.00 40.10 3.72
1254 1273 1.258445 ACCAGCCTCAGTACTTCGGG 61.258 60.000 8.81 5.51 0.00 5.14
1836 1873 1.694150 TCTCTGCAAGTGCTAGTTGGT 59.306 47.619 4.69 0.00 42.66 3.67
1864 1906 3.782656 GGAGTCCTCCCAGTGTAAAAA 57.217 47.619 0.41 0.00 43.94 1.94
1913 1955 8.916628 TTATGCTTATCATGCACTTTGGTATA 57.083 30.769 0.00 0.00 43.59 1.47
2002 2311 7.494298 TGAAACTAGAAAAATGAACCCTTTTGC 59.506 33.333 0.00 0.00 0.00 3.68
2029 2338 3.009115 AGGCACACCGGTAGGCAT 61.009 61.111 27.20 19.92 42.76 4.40
2042 2351 3.560068 CGGTAGGCATAATGGTTCTCAAC 59.440 47.826 0.00 0.00 0.00 3.18
2104 2413 8.647143 AAATGAAAAGTGTGTCTAAAACATGG 57.353 30.769 0.00 0.00 40.80 3.66
2105 2414 6.767524 TGAAAAGTGTGTCTAAAACATGGT 57.232 33.333 0.00 0.00 40.80 3.55
2106 2415 7.164230 TGAAAAGTGTGTCTAAAACATGGTT 57.836 32.000 0.00 0.00 40.80 3.67
2107 2416 7.254852 TGAAAAGTGTGTCTAAAACATGGTTC 58.745 34.615 0.00 0.00 40.80 3.62
2108 2417 7.122055 TGAAAAGTGTGTCTAAAACATGGTTCT 59.878 33.333 0.00 0.00 40.80 3.01
2109 2418 8.514330 AAAAGTGTGTCTAAAACATGGTTCTA 57.486 30.769 0.00 0.00 40.80 2.10
2110 2419 7.730364 AAGTGTGTCTAAAACATGGTTCTAG 57.270 36.000 0.00 1.61 40.80 2.43
2111 2420 7.062749 AGTGTGTCTAAAACATGGTTCTAGA 57.937 36.000 0.00 4.03 40.80 2.43
2112 2421 7.506114 AGTGTGTCTAAAACATGGTTCTAGAA 58.494 34.615 13.51 0.00 40.80 2.10
2113 2422 8.157476 AGTGTGTCTAAAACATGGTTCTAGAAT 58.843 33.333 8.75 0.00 40.80 2.40
2114 2423 8.230486 GTGTGTCTAAAACATGGTTCTAGAATG 58.770 37.037 8.75 5.74 40.80 2.67
2115 2424 7.390440 TGTGTCTAAAACATGGTTCTAGAATGG 59.610 37.037 8.75 1.65 40.80 3.16
2116 2425 7.390718 GTGTCTAAAACATGGTTCTAGAATGGT 59.609 37.037 8.75 0.00 40.80 3.55
2117 2426 7.942341 TGTCTAAAACATGGTTCTAGAATGGTT 59.058 33.333 8.75 5.24 32.67 3.67
2118 2427 8.451748 GTCTAAAACATGGTTCTAGAATGGTTC 58.548 37.037 8.75 0.00 30.06 3.62
2119 2428 8.160765 TCTAAAACATGGTTCTAGAATGGTTCA 58.839 33.333 8.75 3.59 30.06 3.18
2120 2429 7.595819 AAAACATGGTTCTAGAATGGTTCAA 57.404 32.000 8.75 0.00 30.06 2.69
2121 2430 6.824305 AACATGGTTCTAGAATGGTTCAAG 57.176 37.500 8.75 3.20 0.00 3.02
2122 2431 5.880901 ACATGGTTCTAGAATGGTTCAAGT 58.119 37.500 8.75 3.75 0.00 3.16
2123 2432 7.016153 ACATGGTTCTAGAATGGTTCAAGTA 57.984 36.000 8.75 0.00 0.00 2.24
2437 2751 4.674662 TCGTTCTTGTCAAATTTGCGATTG 59.325 37.500 13.54 3.06 0.00 2.67
2441 2755 6.900568 TCTTGTCAAATTTGCGATTGTTTT 57.099 29.167 13.54 0.00 0.00 2.43
2575 2892 6.878317 AGCTTGTATTTATACTGCTGTCAGA 58.122 36.000 3.32 0.00 42.95 3.27
2616 2933 7.734942 TGCTTTTAGAATCAGTCCCAATTTTT 58.265 30.769 0.00 0.00 0.00 1.94
2654 2971 7.977853 GTCATATTTCAAGCACAAATCCAAGAT 59.022 33.333 0.00 0.00 0.00 2.40
2697 3014 6.378280 CAGCAATAGAAGGGGTATTCTTTGTT 59.622 38.462 0.00 0.00 40.08 2.83
2711 3028 7.227910 GGTATTCTTTGTTTGAACAGTACCTGA 59.772 37.037 0.00 0.00 40.50 3.86
2725 3042 4.627467 CAGTACCTGACAGCACTTTATCAC 59.373 45.833 0.00 0.00 32.44 3.06
3055 4746 3.199946 TGGTCTCTCCACTGTTGTTCTTT 59.800 43.478 0.00 0.00 41.93 2.52
3384 5340 7.982252 TGATGATTCTTTCTAGCATCCCTAAT 58.018 34.615 0.00 0.00 35.64 1.73
3743 5705 2.434702 GGAGGGTCGTGATAATGTCCTT 59.565 50.000 0.00 0.00 0.00 3.36
4251 6509 9.971922 ATATGCTATAATTTCTTCTGTTTTGCC 57.028 29.630 0.00 0.00 0.00 4.52
4328 6586 9.727627 GTGGATGAATTTAAGTGATCTCAAATC 57.272 33.333 0.00 0.00 0.00 2.17
4418 6676 4.987285 ACAGCTGATTCAGAGCAATATACG 59.013 41.667 23.35 0.00 39.05 3.06
4554 6812 6.599244 CACATGGATGTATTGTAGAAACAGGT 59.401 38.462 0.00 0.00 39.39 4.00
4555 6813 7.768582 CACATGGATGTATTGTAGAAACAGGTA 59.231 37.037 0.00 0.00 39.39 3.08
4556 6814 8.494433 ACATGGATGTATTGTAGAAACAGGTAT 58.506 33.333 0.00 0.00 39.68 2.73
4557 6815 9.342308 CATGGATGTATTGTAGAAACAGGTATT 57.658 33.333 0.00 0.00 36.83 1.89
4558 6816 9.920946 ATGGATGTATTGTAGAAACAGGTATTT 57.079 29.630 0.00 0.00 36.83 1.40
4621 10299 3.548587 TCGAGACGTTATGCTAATACGC 58.451 45.455 0.00 0.00 0.00 4.42
4640 10318 0.322277 CCACTGATGTTCTGCCTGCT 60.322 55.000 0.00 0.00 0.00 4.24
4705 10383 2.019984 GATCCAAACCATCTCAGCCAC 58.980 52.381 0.00 0.00 0.00 5.01
4755 10433 2.028748 GCTCCAATGTTGAGCACCAAAT 60.029 45.455 7.35 0.00 41.24 2.32
4757 10435 4.142093 GCTCCAATGTTGAGCACCAAATAT 60.142 41.667 7.35 0.00 41.24 1.28
4758 10436 5.581126 TCCAATGTTGAGCACCAAATATC 57.419 39.130 0.00 0.00 36.36 1.63
4761 10439 6.889177 TCCAATGTTGAGCACCAAATATCTTA 59.111 34.615 0.00 0.00 36.36 2.10
4762 10440 6.974622 CCAATGTTGAGCACCAAATATCTTAC 59.025 38.462 0.00 0.00 36.36 2.34
4763 10441 7.362834 CCAATGTTGAGCACCAAATATCTTACA 60.363 37.037 0.00 0.00 36.36 2.41
4810 10516 7.450014 ACTCGACACCATCTTATAGAATCAGAT 59.550 37.037 0.00 0.00 0.00 2.90
4999 10740 3.337619 GCATACATGGCTCCAGCG 58.662 61.111 0.00 0.00 43.26 5.18
5031 10772 4.342665 GGTATCCATCCTTTTCTCGACTCT 59.657 45.833 0.00 0.00 0.00 3.24
5032 10773 5.535406 GGTATCCATCCTTTTCTCGACTCTA 59.465 44.000 0.00 0.00 0.00 2.43
5033 10774 5.782893 ATCCATCCTTTTCTCGACTCTAG 57.217 43.478 0.00 0.00 0.00 2.43
5131 11288 6.183360 ACGACTAATGATTTTGTCTAGCTTGC 60.183 38.462 0.00 0.00 36.03 4.01
5237 11397 9.482627 CTAATGGGTCTGATTATGTCTACTTTC 57.517 37.037 0.00 0.00 0.00 2.62
5278 11438 5.003804 ACTGCCTACATACCTTTTCTTGTG 58.996 41.667 0.00 0.00 0.00 3.33
5369 11529 9.781834 CGATGAAGCAAAATATTTGGTAACTTA 57.218 29.630 0.39 0.00 37.61 2.24
5422 11589 6.544564 TGATGTATGACAGTGATTCATTGCAT 59.455 34.615 16.79 16.79 35.31 3.96
5424 11591 7.486802 TGTATGACAGTGATTCATTGCATAG 57.513 36.000 17.85 0.00 35.31 2.23
5435 11602 5.981088 TTCATTGCATAGTTGGTTGACAT 57.019 34.783 0.00 0.00 0.00 3.06
5570 11737 2.391616 GTGAGCAGGACATCACATGA 57.608 50.000 0.00 0.00 44.21 3.07
5586 11753 3.748568 CACATGATGATGAGATGGAGCAG 59.251 47.826 0.00 0.00 33.36 4.24
5811 14429 9.202273 TGTTTGACCAATATTACAGAAAAATGC 57.798 29.630 0.00 0.00 0.00 3.56
6020 14752 3.149196 GTTCATCTTCTCACCAAGCCAA 58.851 45.455 0.00 0.00 0.00 4.52
6051 14783 3.609175 GCTACTGCGTTTCTTGCAATCAA 60.609 43.478 0.00 0.00 42.70 2.57
6094 14826 9.369904 CTTGGGATTGTTCACCTTTTTATTATG 57.630 33.333 0.00 0.00 0.00 1.90
6129 14862 4.721776 ACTCTCCCCATGTTAGAGCATAAA 59.278 41.667 13.34 0.00 40.36 1.40
6130 14863 5.036117 TCTCCCCATGTTAGAGCATAAAC 57.964 43.478 0.00 0.00 0.00 2.01
6256 14993 2.097791 AGGCGTTCTCGTGTAGAAGATC 59.902 50.000 0.00 0.00 44.94 2.75
6276 15013 6.314120 AGATCCAGAGCAGTATAGTGAAGAT 58.686 40.000 11.91 5.14 0.00 2.40
6392 15134 0.817229 GCTCTGGTGCCTCCATAAGC 60.817 60.000 12.92 12.92 46.12 3.09
6397 15139 2.105477 CTGGTGCCTCCATAAGCAGTAT 59.895 50.000 0.00 0.00 46.12 2.12
6411 15153 1.475213 GCAGTATTAGGGTGCAGGGTC 60.475 57.143 0.00 0.00 37.16 4.46
6447 15193 0.541392 TGAGTGCAGTCGGGCAATAT 59.459 50.000 16.59 0.00 46.93 1.28
6473 15219 3.123620 GAAGTGCAGAGCGGGCAG 61.124 66.667 0.16 0.00 42.85 4.85
6507 15254 3.321111 GTGTAACTGGACCTTGAGACTGA 59.679 47.826 0.00 0.00 0.00 3.41
6509 15256 3.971245 AACTGGACCTTGAGACTGATC 57.029 47.619 0.00 0.00 0.00 2.92
6510 15257 1.821753 ACTGGACCTTGAGACTGATCG 59.178 52.381 0.00 0.00 0.00 3.69
6511 15258 0.532573 TGGACCTTGAGACTGATCGC 59.467 55.000 0.00 0.00 0.00 4.58
6581 15330 3.366396 TGTAGTCTCTGGGAGTGATTCC 58.634 50.000 0.00 0.00 46.00 3.01
6641 15390 2.005451 CAGGATTGTAGACAGCTGTGC 58.995 52.381 27.27 15.71 0.00 4.57
6642 15391 1.065854 AGGATTGTAGACAGCTGTGCC 60.066 52.381 27.27 11.18 0.00 5.01
6688 15437 5.360429 TGGTGGAAATGATGGTCAACATATG 59.640 40.000 0.00 0.00 40.72 1.78
6690 15439 5.360714 GTGGAAATGATGGTCAACATATGGT 59.639 40.000 7.80 0.00 40.72 3.55
6691 15440 5.360429 TGGAAATGATGGTCAACATATGGTG 59.640 40.000 14.95 14.95 40.72 4.17
6692 15441 5.360714 GGAAATGATGGTCAACATATGGTGT 59.639 40.000 20.02 0.61 44.84 4.16
6696 15445 3.778954 TGGTCAACATATGGTGTGTCA 57.221 42.857 20.02 13.41 41.14 3.58
6730 15479 3.531538 ACGAGGAATGTTAATGTGCGAT 58.468 40.909 0.00 0.00 0.00 4.58
6732 15481 5.113383 ACGAGGAATGTTAATGTGCGATTA 58.887 37.500 0.00 0.00 0.00 1.75
6733 15482 5.006358 ACGAGGAATGTTAATGTGCGATTAC 59.994 40.000 0.00 0.00 0.00 1.89
6743 15492 7.333174 TGTTAATGTGCGATTACTGAAGATCAA 59.667 33.333 0.00 0.00 0.00 2.57
6749 15498 4.026145 GCGATTACTGAAGATCAAGAGCAC 60.026 45.833 0.00 0.00 0.00 4.40
6768 15517 4.410492 CACCATTGCAAGAAGAGTACAC 57.590 45.455 4.94 0.00 0.00 2.90
6772 15521 5.009010 ACCATTGCAAGAAGAGTACACTTTG 59.991 40.000 4.94 4.00 0.00 2.77
6775 15524 6.509418 TTGCAAGAAGAGTACACTTTGTTT 57.491 33.333 7.01 0.86 0.00 2.83
6776 15525 6.509418 TGCAAGAAGAGTACACTTTGTTTT 57.491 33.333 7.01 0.00 0.00 2.43
6777 15526 6.551736 TGCAAGAAGAGTACACTTTGTTTTC 58.448 36.000 7.01 0.00 0.00 2.29
6778 15527 6.150307 TGCAAGAAGAGTACACTTTGTTTTCA 59.850 34.615 7.01 1.82 0.00 2.69
6779 15528 6.688813 GCAAGAAGAGTACACTTTGTTTTCAG 59.311 38.462 7.01 0.00 0.00 3.02
6780 15529 7.626452 GCAAGAAGAGTACACTTTGTTTTCAGT 60.626 37.037 7.01 0.00 0.00 3.41
6781 15530 7.923414 AGAAGAGTACACTTTGTTTTCAGTT 57.077 32.000 7.01 0.00 0.00 3.16
6782 15531 8.336801 AGAAGAGTACACTTTGTTTTCAGTTT 57.663 30.769 7.01 0.00 0.00 2.66
6783 15532 9.444600 AGAAGAGTACACTTTGTTTTCAGTTTA 57.555 29.630 7.01 0.00 0.00 2.01
6815 15564 3.619419 TGCATGCTGTATATGTGGTGTT 58.381 40.909 20.33 0.00 0.00 3.32
6829 15578 5.461032 TGTGGTGTTTGTTGAAAGACTTT 57.539 34.783 0.00 0.00 35.99 2.66
6830 15579 5.226396 TGTGGTGTTTGTTGAAAGACTTTG 58.774 37.500 4.85 0.00 35.99 2.77
6839 15606 4.188462 GTTGAAAGACTTTGTTTTGGGGG 58.812 43.478 4.85 0.00 0.00 5.40
6906 15694 6.178607 AGAGGAATTGGAAGTGCAAATTTT 57.821 33.333 0.00 0.00 0.00 1.82
6908 15696 7.734942 AGAGGAATTGGAAGTGCAAATTTTAA 58.265 30.769 0.00 0.00 0.00 1.52
6950 15738 9.857656 AGATGATGATGTAGAAACCACATTTAT 57.142 29.630 0.00 0.00 36.76 1.40
6954 15742 7.864108 TGATGTAGAAACCACATTTATCTGG 57.136 36.000 0.00 0.00 36.76 3.86
6955 15743 7.402054 TGATGTAGAAACCACATTTATCTGGT 58.598 34.615 0.00 0.00 42.97 4.00
6956 15744 8.544622 TGATGTAGAAACCACATTTATCTGGTA 58.455 33.333 0.00 0.00 40.06 3.25
6957 15745 9.561069 GATGTAGAAACCACATTTATCTGGTAT 57.439 33.333 0.00 0.00 40.06 2.73
6962 15750 9.354673 AGAAACCACATTTATCTGGTATATTGG 57.645 33.333 0.00 0.00 40.06 3.16
6963 15751 9.349713 GAAACCACATTTATCTGGTATATTGGA 57.650 33.333 0.00 0.00 40.06 3.53
6964 15752 9.707957 AAACCACATTTATCTGGTATATTGGAA 57.292 29.630 0.00 0.00 40.06 3.53
6965 15753 9.707957 AACCACATTTATCTGGTATATTGGAAA 57.292 29.630 0.00 0.00 40.06 3.13
6966 15754 9.354673 ACCACATTTATCTGGTATATTGGAAAG 57.645 33.333 0.00 0.00 39.11 2.62
6967 15755 9.573166 CCACATTTATCTGGTATATTGGAAAGA 57.427 33.333 0.00 0.00 0.00 2.52
6974 15762 6.841601 TCTGGTATATTGGAAAGATCCTTGG 58.158 40.000 0.00 0.00 46.70 3.61
6975 15763 6.619437 TCTGGTATATTGGAAAGATCCTTGGA 59.381 38.462 0.00 0.00 46.70 3.53
6976 15764 7.295672 TCTGGTATATTGGAAAGATCCTTGGAT 59.704 37.037 1.18 1.18 46.70 3.41
6977 15765 7.461749 TGGTATATTGGAAAGATCCTTGGATC 58.538 38.462 19.08 19.08 46.70 3.36
6978 15766 7.073598 TGGTATATTGGAAAGATCCTTGGATCA 59.926 37.037 25.91 9.32 46.70 2.92
6979 15767 8.112183 GGTATATTGGAAAGATCCTTGGATCAT 58.888 37.037 25.91 15.20 46.70 2.45
6980 15768 9.171877 GTATATTGGAAAGATCCTTGGATCATC 57.828 37.037 25.91 22.02 46.70 2.92
6981 15769 5.455392 TTGGAAAGATCCTTGGATCATCA 57.545 39.130 25.91 16.54 46.70 3.07
6982 15770 5.455392 TGGAAAGATCCTTGGATCATCAA 57.545 39.130 25.91 16.47 46.70 2.57
6983 15771 5.195940 TGGAAAGATCCTTGGATCATCAAC 58.804 41.667 25.91 14.75 46.70 3.18
6984 15772 5.044624 TGGAAAGATCCTTGGATCATCAACT 60.045 40.000 25.91 6.70 46.70 3.16
6985 15773 5.890419 GGAAAGATCCTTGGATCATCAACTT 59.110 40.000 25.91 11.54 42.93 2.66
6986 15774 7.056635 GGAAAGATCCTTGGATCATCAACTTA 58.943 38.462 25.91 0.00 42.93 2.24
6987 15775 7.012799 GGAAAGATCCTTGGATCATCAACTTAC 59.987 40.741 25.91 10.14 42.93 2.34
6988 15776 5.605534 AGATCCTTGGATCATCAACTTACG 58.394 41.667 25.91 0.00 34.19 3.18
6989 15777 4.819105 TCCTTGGATCATCAACTTACGT 57.181 40.909 0.00 0.00 0.00 3.57
6990 15778 5.160607 TCCTTGGATCATCAACTTACGTT 57.839 39.130 0.00 0.00 0.00 3.99
6991 15779 8.326310 AGATCCTTGGATCATCAACTTACGTTG 61.326 40.741 25.91 5.76 41.34 4.10
6998 15786 3.753774 CAACTTACGTTGCCAGCTG 57.246 52.632 6.78 6.78 43.47 4.24
6999 15787 0.238289 CAACTTACGTTGCCAGCTGG 59.762 55.000 29.34 29.34 43.47 4.85
7009 15797 3.644719 CCAGCTGGCTCAGATCCT 58.355 61.111 22.33 0.00 32.44 3.24
7010 15798 1.913722 CCAGCTGGCTCAGATCCTT 59.086 57.895 22.33 0.00 32.44 3.36
7011 15799 1.126488 CCAGCTGGCTCAGATCCTTA 58.874 55.000 22.33 0.00 32.44 2.69
7012 15800 1.070445 CCAGCTGGCTCAGATCCTTAG 59.930 57.143 22.33 0.00 32.44 2.18
7013 15801 1.761784 CAGCTGGCTCAGATCCTTAGT 59.238 52.381 5.57 0.00 32.44 2.24
7014 15802 2.038659 AGCTGGCTCAGATCCTTAGTC 58.961 52.381 6.40 0.00 32.44 2.59
7015 15803 1.759445 GCTGGCTCAGATCCTTAGTCA 59.241 52.381 6.40 0.00 32.44 3.41
7016 15804 2.482839 GCTGGCTCAGATCCTTAGTCAC 60.483 54.545 6.40 0.00 32.44 3.67
7017 15805 2.762887 CTGGCTCAGATCCTTAGTCACA 59.237 50.000 0.00 0.00 32.44 3.58
7018 15806 2.497675 TGGCTCAGATCCTTAGTCACAC 59.502 50.000 0.00 0.00 0.00 3.82
7019 15807 2.763448 GGCTCAGATCCTTAGTCACACT 59.237 50.000 0.00 0.00 0.00 3.55
7020 15808 3.196685 GGCTCAGATCCTTAGTCACACTT 59.803 47.826 0.00 0.00 0.00 3.16
7021 15809 4.402793 GGCTCAGATCCTTAGTCACACTTA 59.597 45.833 0.00 0.00 0.00 2.24
7022 15810 5.451242 GGCTCAGATCCTTAGTCACACTTAG 60.451 48.000 0.00 0.00 0.00 2.18
7023 15811 5.451242 GCTCAGATCCTTAGTCACACTTAGG 60.451 48.000 2.80 2.80 44.21 2.69
7024 15812 4.402793 TCAGATCCTTAGTCACACTTAGGC 59.597 45.833 4.17 0.00 42.95 3.93
7025 15813 3.707102 AGATCCTTAGTCACACTTAGGCC 59.293 47.826 0.00 0.00 42.95 5.19
7026 15814 2.185387 TCCTTAGTCACACTTAGGCCC 58.815 52.381 0.00 0.00 42.95 5.80
7027 15815 1.209747 CCTTAGTCACACTTAGGCCCC 59.790 57.143 0.00 0.00 38.07 5.80
7028 15816 0.899720 TTAGTCACACTTAGGCCCCG 59.100 55.000 0.00 0.00 0.00 5.73
7029 15817 0.251922 TAGTCACACTTAGGCCCCGT 60.252 55.000 0.00 0.00 0.00 5.28
7030 15818 1.125711 AGTCACACTTAGGCCCCGTT 61.126 55.000 0.00 0.00 0.00 4.44
7031 15819 0.672711 GTCACACTTAGGCCCCGTTC 60.673 60.000 0.00 0.00 0.00 3.95
7032 15820 1.740296 CACACTTAGGCCCCGTTCG 60.740 63.158 0.00 0.00 0.00 3.95
7033 15821 2.125269 CACTTAGGCCCCGTTCGG 60.125 66.667 0.00 4.08 0.00 4.30
7048 15836 3.470888 CGGGAATCCACCGCTCCT 61.471 66.667 0.09 0.00 45.34 3.69
7049 15837 2.131709 CGGGAATCCACCGCTCCTA 61.132 63.158 0.09 0.00 45.34 2.94
7050 15838 1.749033 GGGAATCCACCGCTCCTAG 59.251 63.158 0.09 0.00 0.00 3.02
7051 15839 1.749033 GGAATCCACCGCTCCTAGG 59.251 63.158 0.82 0.82 0.00 3.02
7052 15840 0.759436 GGAATCCACCGCTCCTAGGA 60.759 60.000 11.98 11.98 34.12 2.94
7053 15841 1.343069 GAATCCACCGCTCCTAGGAT 58.657 55.000 13.12 0.00 42.46 3.24
7054 15842 1.273886 GAATCCACCGCTCCTAGGATC 59.726 57.143 13.12 7.33 39.86 3.36
7055 15843 0.485099 ATCCACCGCTCCTAGGATCT 59.515 55.000 13.12 0.00 36.11 2.75
7056 15844 0.468214 TCCACCGCTCCTAGGATCTG 60.468 60.000 13.12 7.25 0.00 2.90
7057 15845 0.757188 CCACCGCTCCTAGGATCTGT 60.757 60.000 13.12 7.98 0.00 3.41
7058 15846 0.387202 CACCGCTCCTAGGATCTGTG 59.613 60.000 18.83 18.83 0.00 3.66
7059 15847 0.757188 ACCGCTCCTAGGATCTGTGG 60.757 60.000 21.76 21.76 0.00 4.17
7060 15848 0.468214 CCGCTCCTAGGATCTGTGGA 60.468 60.000 19.72 0.00 0.00 4.02
7061 15849 0.958091 CGCTCCTAGGATCTGTGGAG 59.042 60.000 13.12 17.81 46.38 3.86
7063 15851 0.958091 CTCCTAGGATCTGTGGAGCG 59.042 60.000 13.12 0.00 39.46 5.03
7064 15852 0.468214 TCCTAGGATCTGTGGAGCGG 60.468 60.000 7.62 0.00 0.00 5.52
7065 15853 1.365633 CTAGGATCTGTGGAGCGGC 59.634 63.158 0.00 0.00 0.00 6.53
7066 15854 1.075970 TAGGATCTGTGGAGCGGCT 60.076 57.895 0.00 0.00 0.00 5.52
7067 15855 1.395045 TAGGATCTGTGGAGCGGCTG 61.395 60.000 7.50 0.00 0.00 4.85
7068 15856 2.581354 GATCTGTGGAGCGGCTGT 59.419 61.111 7.50 0.00 0.00 4.40
7069 15857 1.078848 GATCTGTGGAGCGGCTGTT 60.079 57.895 7.50 0.00 0.00 3.16
7070 15858 0.674895 GATCTGTGGAGCGGCTGTTT 60.675 55.000 7.50 0.00 0.00 2.83
7071 15859 0.957395 ATCTGTGGAGCGGCTGTTTG 60.957 55.000 7.50 0.00 0.00 2.93
7072 15860 3.259425 CTGTGGAGCGGCTGTTTGC 62.259 63.158 7.50 0.00 41.94 3.68
7073 15861 2.980233 GTGGAGCGGCTGTTTGCT 60.980 61.111 7.50 0.00 45.90 3.91
7074 15862 1.671054 GTGGAGCGGCTGTTTGCTA 60.671 57.895 7.50 0.00 42.60 3.49
7075 15863 1.375908 TGGAGCGGCTGTTTGCTAG 60.376 57.895 7.50 0.00 42.60 3.42
7076 15864 2.754995 GGAGCGGCTGTTTGCTAGC 61.755 63.158 7.50 8.10 42.60 3.42
7077 15865 2.348998 AGCGGCTGTTTGCTAGCT 59.651 55.556 17.23 0.00 45.16 3.32
7078 15866 1.743252 AGCGGCTGTTTGCTAGCTC 60.743 57.895 17.23 7.19 46.22 4.09
7079 15867 2.754995 GCGGCTGTTTGCTAGCTCC 61.755 63.158 17.23 4.12 40.92 4.70
7080 15868 1.078848 CGGCTGTTTGCTAGCTCCT 60.079 57.895 17.23 0.00 40.92 3.69
7081 15869 0.175760 CGGCTGTTTGCTAGCTCCTA 59.824 55.000 17.23 0.00 40.92 2.94
7082 15870 1.804372 CGGCTGTTTGCTAGCTCCTAG 60.804 57.143 17.23 10.31 40.92 3.02
7083 15871 1.482593 GGCTGTTTGCTAGCTCCTAGA 59.517 52.381 17.23 0.00 40.92 2.43
7084 15872 2.103941 GGCTGTTTGCTAGCTCCTAGAT 59.896 50.000 17.23 0.00 40.92 1.98
7085 15873 3.432890 GGCTGTTTGCTAGCTCCTAGATT 60.433 47.826 17.23 0.00 40.92 2.40
7086 15874 4.195416 GCTGTTTGCTAGCTCCTAGATTT 58.805 43.478 17.23 0.00 36.26 2.17
7087 15875 4.637977 GCTGTTTGCTAGCTCCTAGATTTT 59.362 41.667 17.23 0.00 36.26 1.82
7088 15876 5.448360 GCTGTTTGCTAGCTCCTAGATTTTG 60.448 44.000 17.23 0.00 36.26 2.44
7089 15877 4.396166 TGTTTGCTAGCTCCTAGATTTTGC 59.604 41.667 17.23 0.00 36.26 3.68
7090 15878 3.912496 TGCTAGCTCCTAGATTTTGCA 57.088 42.857 17.23 0.00 36.26 4.08
7091 15879 3.535561 TGCTAGCTCCTAGATTTTGCAC 58.464 45.455 17.23 0.00 36.26 4.57
7092 15880 3.198635 TGCTAGCTCCTAGATTTTGCACT 59.801 43.478 17.23 0.00 36.26 4.40
7093 15881 4.405680 TGCTAGCTCCTAGATTTTGCACTA 59.594 41.667 17.23 0.00 36.26 2.74
7094 15882 4.747605 GCTAGCTCCTAGATTTTGCACTAC 59.252 45.833 7.70 0.00 36.26 2.73
7095 15883 4.826274 AGCTCCTAGATTTTGCACTACA 57.174 40.909 0.00 0.00 0.00 2.74
7096 15884 4.764172 AGCTCCTAGATTTTGCACTACAG 58.236 43.478 0.00 0.00 0.00 2.74
7097 15885 3.311048 GCTCCTAGATTTTGCACTACAGC 59.689 47.826 0.00 0.00 0.00 4.40
7098 15886 4.764172 CTCCTAGATTTTGCACTACAGCT 58.236 43.478 0.00 0.00 34.99 4.24
7099 15887 4.759782 TCCTAGATTTTGCACTACAGCTC 58.240 43.478 0.00 0.00 34.99 4.09
7100 15888 3.873952 CCTAGATTTTGCACTACAGCTCC 59.126 47.826 0.00 0.00 34.99 4.70
7101 15889 2.350522 AGATTTTGCACTACAGCTCCG 58.649 47.619 0.00 0.00 34.99 4.63
7102 15890 2.076863 GATTTTGCACTACAGCTCCGT 58.923 47.619 0.00 0.00 34.99 4.69
7103 15891 1.508632 TTTTGCACTACAGCTCCGTC 58.491 50.000 0.00 0.00 34.99 4.79
7104 15892 0.320421 TTTGCACTACAGCTCCGTCC 60.320 55.000 0.00 0.00 34.99 4.79
7105 15893 2.202623 GCACTACAGCTCCGTCCG 60.203 66.667 0.00 0.00 0.00 4.79
7106 15894 2.202623 CACTACAGCTCCGTCCGC 60.203 66.667 0.00 0.00 0.00 5.54
7107 15895 2.361357 ACTACAGCTCCGTCCGCT 60.361 61.111 0.00 0.00 38.49 5.52
7108 15896 2.408241 ACTACAGCTCCGTCCGCTC 61.408 63.158 0.00 0.00 35.07 5.03
7109 15897 3.127352 CTACAGCTCCGTCCGCTCC 62.127 68.421 0.00 0.00 35.07 4.70
7127 15915 4.504916 CGGAGCAGAGCCGTGGAG 62.505 72.222 0.00 0.00 43.66 3.86
7128 15916 4.828925 GGAGCAGAGCCGTGGAGC 62.829 72.222 0.00 0.00 0.00 4.70
7138 15926 2.179517 CGTGGAGCGGAGTGACTC 59.820 66.667 3.47 3.47 36.85 3.36
7147 15935 1.592223 GGAGTGACTCCGAACAGGG 59.408 63.158 16.95 0.00 41.08 4.45
7148 15936 1.079750 GAGTGACTCCGAACAGGGC 60.080 63.158 0.00 0.00 41.52 5.19
7149 15937 2.047179 GTGACTCCGAACAGGGCC 60.047 66.667 0.00 0.00 41.52 5.80
7150 15938 2.203788 TGACTCCGAACAGGGCCT 60.204 61.111 0.00 0.00 41.52 5.19
7151 15939 1.841556 TGACTCCGAACAGGGCCTT 60.842 57.895 1.32 0.00 41.52 4.35
7152 15940 0.543410 TGACTCCGAACAGGGCCTTA 60.543 55.000 1.32 0.00 41.52 2.69
7153 15941 0.175989 GACTCCGAACAGGGCCTTAG 59.824 60.000 1.32 0.00 41.52 2.18
7154 15942 0.544595 ACTCCGAACAGGGCCTTAGT 60.545 55.000 1.32 0.00 41.52 2.24
7155 15943 0.108138 CTCCGAACAGGGCCTTAGTG 60.108 60.000 1.32 0.00 41.52 2.74
7156 15944 1.078426 CCGAACAGGGCCTTAGTGG 60.078 63.158 1.32 0.00 35.97 4.00
7168 15956 3.418684 CCTTAGTGGCAACCAGTTACT 57.581 47.619 0.00 0.00 38.30 2.24
7169 15957 4.546829 CCTTAGTGGCAACCAGTTACTA 57.453 45.455 0.00 0.00 38.30 1.82
7170 15958 5.099042 CCTTAGTGGCAACCAGTTACTAT 57.901 43.478 0.00 0.00 38.30 2.12
7171 15959 5.497474 CCTTAGTGGCAACCAGTTACTATT 58.503 41.667 0.00 0.00 38.30 1.73
7172 15960 6.646267 CCTTAGTGGCAACCAGTTACTATTA 58.354 40.000 0.00 0.00 38.30 0.98
7173 15961 7.280356 CCTTAGTGGCAACCAGTTACTATTAT 58.720 38.462 0.00 0.00 38.30 1.28
7174 15962 7.773690 CCTTAGTGGCAACCAGTTACTATTATT 59.226 37.037 0.00 0.00 38.30 1.40
7175 15963 8.726870 TTAGTGGCAACCAGTTACTATTATTC 57.273 34.615 0.00 0.00 38.30 1.75
7176 15964 6.717289 AGTGGCAACCAGTTACTATTATTCA 58.283 36.000 0.00 0.00 32.53 2.57
7177 15965 6.598064 AGTGGCAACCAGTTACTATTATTCAC 59.402 38.462 0.00 0.00 32.53 3.18
7178 15966 5.883673 TGGCAACCAGTTACTATTATTCACC 59.116 40.000 0.00 0.00 0.00 4.02
7179 15967 5.883673 GGCAACCAGTTACTATTATTCACCA 59.116 40.000 0.00 0.00 0.00 4.17
7180 15968 6.546034 GGCAACCAGTTACTATTATTCACCAT 59.454 38.462 0.00 0.00 0.00 3.55
7181 15969 7.255139 GGCAACCAGTTACTATTATTCACCATC 60.255 40.741 0.00 0.00 0.00 3.51
7182 15970 7.499232 GCAACCAGTTACTATTATTCACCATCT 59.501 37.037 0.00 0.00 0.00 2.90
7185 15973 9.435570 ACCAGTTACTATTATTCACCATCTAGT 57.564 33.333 0.00 0.00 0.00 2.57
7189 15977 9.837525 GTTACTATTATTCACCATCTAGTACCG 57.162 37.037 0.00 0.00 0.00 4.02
7190 15978 6.921914 ACTATTATTCACCATCTAGTACCGC 58.078 40.000 0.00 0.00 0.00 5.68
7191 15979 4.595762 TTATTCACCATCTAGTACCGCC 57.404 45.455 0.00 0.00 0.00 6.13
7192 15980 1.117150 TTCACCATCTAGTACCGCCC 58.883 55.000 0.00 0.00 0.00 6.13
7193 15981 0.260816 TCACCATCTAGTACCGCCCT 59.739 55.000 0.00 0.00 0.00 5.19
7194 15982 1.496001 TCACCATCTAGTACCGCCCTA 59.504 52.381 0.00 0.00 0.00 3.53
7195 15983 1.612463 CACCATCTAGTACCGCCCTAC 59.388 57.143 0.00 0.00 0.00 3.18
7196 15984 1.254954 CCATCTAGTACCGCCCTACC 58.745 60.000 0.00 0.00 0.00 3.18
7197 15985 1.479942 CCATCTAGTACCGCCCTACCA 60.480 57.143 0.00 0.00 0.00 3.25
7198 15986 2.526432 CATCTAGTACCGCCCTACCAT 58.474 52.381 0.00 0.00 0.00 3.55
7199 15987 1.991121 TCTAGTACCGCCCTACCATG 58.009 55.000 0.00 0.00 0.00 3.66
7200 15988 1.496001 TCTAGTACCGCCCTACCATGA 59.504 52.381 0.00 0.00 0.00 3.07
7201 15989 2.091720 TCTAGTACCGCCCTACCATGAA 60.092 50.000 0.00 0.00 0.00 2.57
7202 15990 1.802553 AGTACCGCCCTACCATGAAT 58.197 50.000 0.00 0.00 0.00 2.57
7203 15991 1.416401 AGTACCGCCCTACCATGAATG 59.584 52.381 0.00 0.00 0.00 2.67
7204 15992 1.140252 GTACCGCCCTACCATGAATGT 59.860 52.381 0.00 0.00 0.00 2.71
7205 15993 0.623723 ACCGCCCTACCATGAATGTT 59.376 50.000 0.00 0.00 0.00 2.71
7206 15994 1.841277 ACCGCCCTACCATGAATGTTA 59.159 47.619 0.00 0.00 0.00 2.41
7207 15995 2.240160 ACCGCCCTACCATGAATGTTAA 59.760 45.455 0.00 0.00 0.00 2.01
7208 15996 2.878406 CCGCCCTACCATGAATGTTAAG 59.122 50.000 0.00 0.00 0.00 1.85
7209 15997 2.878406 CGCCCTACCATGAATGTTAAGG 59.122 50.000 0.00 0.00 0.00 2.69
7210 15998 3.684413 CGCCCTACCATGAATGTTAAGGT 60.684 47.826 0.00 0.00 36.40 3.50
7211 15999 3.632145 GCCCTACCATGAATGTTAAGGTG 59.368 47.826 0.00 0.00 33.91 4.00
7212 16000 4.207165 CCCTACCATGAATGTTAAGGTGG 58.793 47.826 0.00 0.00 33.91 4.61
7213 16001 3.632145 CCTACCATGAATGTTAAGGTGGC 59.368 47.826 0.00 0.00 33.91 5.01
7214 16002 3.168035 ACCATGAATGTTAAGGTGGCA 57.832 42.857 0.00 0.00 0.00 4.92
7215 16003 3.505386 ACCATGAATGTTAAGGTGGCAA 58.495 40.909 0.00 0.00 0.00 4.52
7216 16004 3.258123 ACCATGAATGTTAAGGTGGCAAC 59.742 43.478 0.00 0.00 0.00 4.17
7225 16013 4.911901 GGTGGCAACCAGGTGTAA 57.088 55.556 5.00 0.00 46.75 2.41
7226 16014 3.356814 GGTGGCAACCAGGTGTAAT 57.643 52.632 5.00 0.00 46.75 1.89
7227 16015 1.627864 GGTGGCAACCAGGTGTAATT 58.372 50.000 5.00 0.00 46.75 1.40
7228 16016 2.797786 GGTGGCAACCAGGTGTAATTA 58.202 47.619 5.00 0.00 46.75 1.40
7229 16017 3.361786 GGTGGCAACCAGGTGTAATTAT 58.638 45.455 5.00 0.00 46.75 1.28
7230 16018 3.767131 GGTGGCAACCAGGTGTAATTATT 59.233 43.478 5.00 0.00 46.75 1.40
7231 16019 4.142249 GGTGGCAACCAGGTGTAATTATTC 60.142 45.833 5.00 0.00 46.75 1.75
7232 16020 4.461081 GTGGCAACCAGGTGTAATTATTCA 59.539 41.667 0.00 0.00 32.34 2.57
7233 16021 4.461081 TGGCAACCAGGTGTAATTATTCAC 59.539 41.667 0.00 0.00 0.00 3.18
7244 16032 7.730364 GTGTAATTATTCACCATCGGATTCT 57.270 36.000 0.00 0.00 0.00 2.40
7245 16033 7.797819 GTGTAATTATTCACCATCGGATTCTC 58.202 38.462 0.00 0.00 0.00 2.87
7246 16034 7.657761 GTGTAATTATTCACCATCGGATTCTCT 59.342 37.037 0.00 0.00 0.00 3.10
7247 16035 7.657354 TGTAATTATTCACCATCGGATTCTCTG 59.343 37.037 0.00 0.00 0.00 3.35
7248 16036 2.315925 TTCACCATCGGATTCTCTGC 57.684 50.000 0.00 0.00 0.00 4.26
7249 16037 1.489481 TCACCATCGGATTCTCTGCT 58.511 50.000 0.00 0.00 0.00 4.24
7250 16038 1.410517 TCACCATCGGATTCTCTGCTC 59.589 52.381 0.00 0.00 0.00 4.26
7251 16039 1.411977 CACCATCGGATTCTCTGCTCT 59.588 52.381 0.00 0.00 0.00 4.09
7252 16040 2.114616 ACCATCGGATTCTCTGCTCTT 58.885 47.619 0.00 0.00 0.00 2.85
7253 16041 2.102252 ACCATCGGATTCTCTGCTCTTC 59.898 50.000 0.00 0.00 0.00 2.87
7254 16042 2.364970 CCATCGGATTCTCTGCTCTTCT 59.635 50.000 0.00 0.00 0.00 2.85
7255 16043 3.181467 CCATCGGATTCTCTGCTCTTCTT 60.181 47.826 0.00 0.00 0.00 2.52
7256 16044 4.440880 CATCGGATTCTCTGCTCTTCTTT 58.559 43.478 0.00 0.00 0.00 2.52
7257 16045 3.854666 TCGGATTCTCTGCTCTTCTTTG 58.145 45.455 0.00 0.00 0.00 2.77
7258 16046 2.935201 CGGATTCTCTGCTCTTCTTTGG 59.065 50.000 0.00 0.00 0.00 3.28
7259 16047 3.368843 CGGATTCTCTGCTCTTCTTTGGA 60.369 47.826 0.00 0.00 0.00 3.53
7260 16048 4.682859 CGGATTCTCTGCTCTTCTTTGGAT 60.683 45.833 0.00 0.00 0.00 3.41
7261 16049 4.575645 GGATTCTCTGCTCTTCTTTGGATG 59.424 45.833 0.00 0.00 0.00 3.51
7262 16050 4.897509 TTCTCTGCTCTTCTTTGGATGA 57.102 40.909 0.00 0.00 0.00 2.92
7263 16051 4.199432 TCTCTGCTCTTCTTTGGATGAC 57.801 45.455 0.00 0.00 0.00 3.06
7264 16052 3.580022 TCTCTGCTCTTCTTTGGATGACA 59.420 43.478 0.00 0.00 0.00 3.58
7265 16053 4.224594 TCTCTGCTCTTCTTTGGATGACAT 59.775 41.667 0.00 0.00 0.00 3.06
7266 16054 4.511527 TCTGCTCTTCTTTGGATGACATC 58.488 43.478 6.91 6.91 0.00 3.06
7267 16055 4.019950 TCTGCTCTTCTTTGGATGACATCA 60.020 41.667 17.08 1.04 0.00 3.07
7268 16056 4.851843 TGCTCTTCTTTGGATGACATCAT 58.148 39.130 17.08 0.00 39.70 2.45
7279 16067 3.629058 GATGACATCATCTGTGCATTGC 58.371 45.455 13.56 0.46 46.88 3.56
7280 16068 2.438411 TGACATCATCTGTGCATTGCA 58.562 42.857 7.38 7.38 38.54 4.08
7281 16069 2.820787 TGACATCATCTGTGCATTGCAA 59.179 40.909 13.94 0.00 41.47 4.08
7282 16070 3.256136 TGACATCATCTGTGCATTGCAAA 59.744 39.130 13.94 7.20 41.47 3.68
7283 16071 3.845178 ACATCATCTGTGCATTGCAAAG 58.155 40.909 20.81 20.81 44.59 2.77
7284 16072 2.357327 TCATCTGTGCATTGCAAAGC 57.643 45.000 21.82 19.31 43.07 3.51
7285 16073 1.890489 TCATCTGTGCATTGCAAAGCT 59.110 42.857 25.26 11.37 43.07 3.74
7286 16074 1.992667 CATCTGTGCATTGCAAAGCTG 59.007 47.619 25.26 18.81 43.07 4.24
7287 16075 1.034356 TCTGTGCATTGCAAAGCTGT 58.966 45.000 25.26 0.00 43.07 4.40
7288 16076 1.409790 TCTGTGCATTGCAAAGCTGTT 59.590 42.857 25.26 0.00 43.07 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.612033 CGGGTGAAAACATTTCTCCGTTAC 60.612 45.833 19.71 8.04 33.99 2.50
47 48 6.871492 ACAAATATTCCGGGTGAAAACATTTC 59.129 34.615 0.00 0.00 36.33 2.17
106 109 6.500684 TGGCTAGTCTTGATCAATTTTGTC 57.499 37.500 8.96 1.40 0.00 3.18
108 111 6.320672 AGGATGGCTAGTCTTGATCAATTTTG 59.679 38.462 8.96 0.00 0.00 2.44
113 116 3.389329 GGAGGATGGCTAGTCTTGATCAA 59.611 47.826 8.12 8.12 0.00 2.57
124 127 3.181329 TCTCTTTGTTGGAGGATGGCTA 58.819 45.455 0.00 0.00 0.00 3.93
140 143 9.425577 GAGTAGCTGTAAATACAAGTTTCTCTT 57.574 33.333 0.00 0.00 35.50 2.85
157 160 1.199558 GAGAAACGACCGAGTAGCTGT 59.800 52.381 0.00 0.00 0.00 4.40
167 170 2.370885 GGCGCTTAGAGAAACGACC 58.629 57.895 7.64 0.00 0.00 4.79
168 171 1.082679 GGGGCGCTTAGAGAAACGAC 61.083 60.000 7.64 0.00 0.00 4.34
171 174 1.822506 AAAGGGGCGCTTAGAGAAAC 58.177 50.000 17.73 0.00 0.00 2.78
202 205 7.596621 CAGTATCAACGTCTGACTAATGCATAT 59.403 37.037 0.00 0.00 36.69 1.78
204 207 5.750547 CAGTATCAACGTCTGACTAATGCAT 59.249 40.000 6.21 0.00 36.69 3.96
252 255 1.097232 TGCGCAAGATCAATTCCTGG 58.903 50.000 8.16 0.00 43.02 4.45
256 259 2.253603 GGTTGTGCGCAAGATCAATTC 58.746 47.619 14.00 5.42 43.02 2.17
263 266 0.528017 TTTGTTGGTTGTGCGCAAGA 59.472 45.000 14.00 0.00 43.02 3.02
279 282 5.030874 GTCGATTACCTTGACCTGTTTTG 57.969 43.478 0.00 0.00 32.75 2.44
289 292 4.880047 AAGGTGGCGGTCGATTACCTTG 62.880 54.545 18.28 0.00 46.77 3.61
292 295 0.461135 TAAGGTGGCGGTCGATTACC 59.539 55.000 0.00 0.00 45.77 2.85
302 305 0.321653 AAGAAGCTGGTAAGGTGGCG 60.322 55.000 0.00 0.00 33.40 5.69
304 307 2.859165 TGAAGAAGCTGGTAAGGTGG 57.141 50.000 0.00 0.00 33.40 4.61
305 308 3.057946 GCTTTGAAGAAGCTGGTAAGGTG 60.058 47.826 3.65 0.00 40.01 4.00
310 313 3.315191 GTGTTGCTTTGAAGAAGCTGGTA 59.685 43.478 11.51 0.00 43.38 3.25
362 366 1.140816 GTCCTGAGCAAACGTCAGAC 58.859 55.000 2.95 0.00 43.65 3.51
369 373 4.361253 TCAGCGTCCTGAGCAAAC 57.639 55.556 0.00 0.00 42.98 2.93
378 382 5.459434 GCTATAACTCTTACTTTCAGCGTCC 59.541 44.000 0.00 0.00 0.00 4.79
379 383 5.459434 GGCTATAACTCTTACTTTCAGCGTC 59.541 44.000 0.00 0.00 0.00 5.19
403 407 1.187271 CGACGTGAACAAGTCTCAACG 59.813 52.381 15.87 0.00 37.61 4.10
410 414 2.339418 TGAAACACGACGTGAACAAGT 58.661 42.857 33.12 7.88 36.96 3.16
419 423 7.474332 CACAATTACTCTTTATGAAACACGACG 59.526 37.037 0.00 0.00 0.00 5.12
428 432 7.392953 TGCCAATGACACAATTACTCTTTATGA 59.607 33.333 0.00 0.00 0.00 2.15
435 439 7.483307 ACAATATGCCAATGACACAATTACTC 58.517 34.615 0.00 0.00 0.00 2.59
437 441 8.620416 TCTACAATATGCCAATGACACAATTAC 58.380 33.333 0.00 0.00 0.00 1.89
445 449 7.168219 TCCCTATTCTACAATATGCCAATGAC 58.832 38.462 0.00 0.00 0.00 3.06
472 476 1.000233 TGGATGATGGGTTGGTGGC 60.000 57.895 0.00 0.00 0.00 5.01
478 482 2.892852 CACACTTTGTGGATGATGGGTT 59.107 45.455 2.72 0.00 44.27 4.11
529 533 4.022935 TGGCTATTTTGATTGATCGCATCC 60.023 41.667 2.97 0.00 0.00 3.51
532 536 4.157472 TGTTGGCTATTTTGATTGATCGCA 59.843 37.500 0.00 0.00 0.00 5.10
536 540 7.276218 CGAAACATGTTGGCTATTTTGATTGAT 59.724 33.333 12.82 0.00 0.00 2.57
544 548 4.522789 AGAACCGAAACATGTTGGCTATTT 59.477 37.500 12.82 0.30 0.00 1.40
562 566 4.083484 CGGTACATCCTGTCAAAAAGAACC 60.083 45.833 0.00 0.00 0.00 3.62
611 615 0.179163 GCCTTCCTTTCCAAATCGCG 60.179 55.000 0.00 0.00 0.00 5.87
620 624 2.744768 CGCTGCTCGCCTTCCTTTC 61.745 63.158 0.00 0.00 34.21 2.62
644 648 1.135803 CGCACGGGTGAAAATCGAATT 60.136 47.619 2.38 0.00 0.00 2.17
672 676 1.176527 GCCCAATTAGCTGCACTTGA 58.823 50.000 1.02 0.00 0.00 3.02
702 707 2.047560 ACTGGGCCGCGTCTAAAC 60.048 61.111 4.92 0.00 0.00 2.01
730 735 0.955919 GGGTTGTGCTCCGGAAAGAG 60.956 60.000 5.23 0.00 36.92 2.85
734 739 1.072505 GAAGGGTTGTGCTCCGGAA 59.927 57.895 5.23 0.00 0.00 4.30
800 816 3.117171 CAGGCAGAGCACGCAGTC 61.117 66.667 0.00 0.00 41.61 3.51
937 953 3.246112 AACACACCAGCCCCGCTA 61.246 61.111 0.00 0.00 36.40 4.26
953 969 0.854218 TCAAACCCTAACCCCAGCAA 59.146 50.000 0.00 0.00 0.00 3.91
1512 1549 4.796231 TCGCGCTTCTTCCTCGCC 62.796 66.667 5.56 0.00 45.34 5.54
1907 1949 4.836175 TCTAGAATCACGCCCAATATACCA 59.164 41.667 0.00 0.00 0.00 3.25
1913 1955 3.243907 GCTAGTCTAGAATCACGCCCAAT 60.244 47.826 11.27 0.00 0.00 3.16
1988 2297 1.039856 ACTGCGCAAAAGGGTTCATT 58.960 45.000 13.05 0.00 0.00 2.57
2002 2311 3.121030 GTGTGCCTGCCTACTGCG 61.121 66.667 0.00 0.00 45.60 5.18
2029 2338 3.932710 GAGTGATGCGTTGAGAACCATTA 59.067 43.478 0.00 0.00 0.00 1.90
2042 2351 4.333649 ACTGTCAATTAATGGAGTGATGCG 59.666 41.667 0.00 0.00 0.00 4.73
2080 2389 7.781056 ACCATGTTTTAGACACACTTTTCATT 58.219 30.769 0.00 0.00 42.04 2.57
2081 2390 7.346751 ACCATGTTTTAGACACACTTTTCAT 57.653 32.000 0.00 0.00 42.04 2.57
2086 2395 7.506114 TCTAGAACCATGTTTTAGACACACTT 58.494 34.615 3.82 0.00 42.04 3.16
2088 2397 7.724305 TTCTAGAACCATGTTTTAGACACAC 57.276 36.000 0.00 0.00 42.04 3.82
2089 2398 7.390440 CCATTCTAGAACCATGTTTTAGACACA 59.610 37.037 7.48 0.00 42.04 3.72
2090 2399 7.390718 ACCATTCTAGAACCATGTTTTAGACAC 59.609 37.037 7.48 0.00 42.04 3.67
2091 2400 7.458397 ACCATTCTAGAACCATGTTTTAGACA 58.542 34.615 7.48 1.52 43.71 3.41
2092 2401 7.923414 ACCATTCTAGAACCATGTTTTAGAC 57.077 36.000 7.48 0.00 0.00 2.59
2094 2403 8.335532 TGAACCATTCTAGAACCATGTTTTAG 57.664 34.615 7.48 0.00 0.00 1.85
2096 2405 7.287696 ACTTGAACCATTCTAGAACCATGTTTT 59.712 33.333 7.48 0.00 36.29 2.43
2097 2406 6.777580 ACTTGAACCATTCTAGAACCATGTTT 59.222 34.615 7.48 0.00 36.29 2.83
2098 2407 6.306987 ACTTGAACCATTCTAGAACCATGTT 58.693 36.000 7.48 8.64 36.29 2.71
2100 2409 6.540189 CCTACTTGAACCATTCTAGAACCATG 59.460 42.308 7.48 2.31 36.29 3.66
2103 2412 5.189145 TCCCTACTTGAACCATTCTAGAACC 59.811 44.000 7.48 0.00 36.29 3.62
2104 2413 6.154706 TCTCCCTACTTGAACCATTCTAGAAC 59.845 42.308 7.48 0.00 36.29 3.01
2105 2414 6.261435 TCTCCCTACTTGAACCATTCTAGAA 58.739 40.000 7.82 7.82 36.29 2.10
2106 2415 5.838955 TCTCCCTACTTGAACCATTCTAGA 58.161 41.667 6.96 0.00 36.29 2.43
2107 2416 6.546428 TTCTCCCTACTTGAACCATTCTAG 57.454 41.667 0.00 0.00 38.28 2.43
2108 2417 5.104900 GCTTCTCCCTACTTGAACCATTCTA 60.105 44.000 0.00 0.00 0.00 2.10
2109 2418 4.323868 GCTTCTCCCTACTTGAACCATTCT 60.324 45.833 0.00 0.00 0.00 2.40
2110 2419 3.942115 GCTTCTCCCTACTTGAACCATTC 59.058 47.826 0.00 0.00 0.00 2.67
2111 2420 3.589288 AGCTTCTCCCTACTTGAACCATT 59.411 43.478 0.00 0.00 0.00 3.16
2112 2421 3.185455 AGCTTCTCCCTACTTGAACCAT 58.815 45.455 0.00 0.00 0.00 3.55
2113 2422 2.621070 AGCTTCTCCCTACTTGAACCA 58.379 47.619 0.00 0.00 0.00 3.67
2114 2423 3.704800 AAGCTTCTCCCTACTTGAACC 57.295 47.619 0.00 0.00 0.00 3.62
2115 2424 3.189495 GCAAAGCTTCTCCCTACTTGAAC 59.811 47.826 0.00 0.00 0.00 3.18
2116 2425 3.181445 TGCAAAGCTTCTCCCTACTTGAA 60.181 43.478 0.00 0.00 0.00 2.69
2117 2426 2.371841 TGCAAAGCTTCTCCCTACTTGA 59.628 45.455 0.00 0.00 0.00 3.02
2118 2427 2.783135 TGCAAAGCTTCTCCCTACTTG 58.217 47.619 0.00 0.00 0.00 3.16
2119 2428 3.073062 TCTTGCAAAGCTTCTCCCTACTT 59.927 43.478 0.00 0.00 45.70 2.24
2120 2429 2.639839 TCTTGCAAAGCTTCTCCCTACT 59.360 45.455 0.00 0.00 45.70 2.57
2121 2430 3.006247 CTCTTGCAAAGCTTCTCCCTAC 58.994 50.000 0.00 0.00 45.70 3.18
2122 2431 2.616510 GCTCTTGCAAAGCTTCTCCCTA 60.617 50.000 19.77 0.00 45.70 3.53
2123 2432 1.885790 GCTCTTGCAAAGCTTCTCCCT 60.886 52.381 19.77 0.00 45.70 4.20
2220 2534 5.975693 TTCCTAAACCTGCATTAACAAGG 57.024 39.130 0.00 0.00 0.00 3.61
2334 2648 8.609176 TCAAACATAAGTAACAACAGAACAGAC 58.391 33.333 0.00 0.00 0.00 3.51
2544 2859 9.265901 CAGCAGTATAAATACAAGCTTAGACAT 57.734 33.333 13.90 0.00 41.62 3.06
2545 2860 8.258007 ACAGCAGTATAAATACAAGCTTAGACA 58.742 33.333 13.90 0.00 41.62 3.41
2616 2933 7.041107 GCTTGAAATATGACCAAATGGCTAAA 58.959 34.615 0.00 0.00 39.32 1.85
2654 2971 2.642427 CTGCACATAACATGCTGGGTA 58.358 47.619 0.00 0.00 43.77 3.69
2711 3028 1.806542 CCTTGCGTGATAAAGTGCTGT 59.193 47.619 0.00 0.00 0.00 4.40
2725 3042 3.121030 CCGGTTGCTCTCCTTGCG 61.121 66.667 0.00 0.00 0.00 4.85
2905 4413 2.653234 AGGCCAAGGAGCTTGATATG 57.347 50.000 5.01 0.00 43.42 1.78
2947 4455 2.590007 CACCATAGAGGCAGGCGC 60.590 66.667 0.00 0.00 43.14 6.53
3118 4810 3.199880 ACAACTGAGAGAACCACCAAG 57.800 47.619 0.00 0.00 0.00 3.61
3125 4820 6.128688 GCAGAATGAAGTACAACTGAGAGAAC 60.129 42.308 0.00 0.00 39.69 3.01
3384 5340 7.367285 GGCTAAATGTATGTTTGTCACTCAAA 58.633 34.615 0.00 0.00 42.79 2.69
3684 5646 4.675510 TCTTTTGCTTGCTTTTCAGTGAG 58.324 39.130 0.00 0.00 0.00 3.51
3743 5705 8.985315 AGTCATGCCTATCATTAAGATTTTCA 57.015 30.769 0.00 0.00 38.19 2.69
4003 5970 6.112734 TGACAGACACACAGAATAAAGTGTT 58.887 36.000 0.00 0.00 46.04 3.32
4328 6586 3.209410 ACAGAGGTGAACAGAAAAGCAG 58.791 45.455 0.00 0.00 0.00 4.24
4418 6676 3.064271 CACGTACAGGTCTCTCTAGCTTC 59.936 52.174 0.00 0.00 0.00 3.86
4573 10251 6.996562 ATATGCATTTGACATTAACATGCG 57.003 33.333 3.54 0.00 36.45 4.73
4621 10299 0.322277 AGCAGGCAGAACATCAGTGG 60.322 55.000 0.00 0.00 0.00 4.00
4705 10383 6.053650 TGAACTGCTAGATCTCATGATTTGG 58.946 40.000 0.00 0.00 32.19 3.28
4788 10494 7.117523 GTGCATCTGATTCTATAAGATGGTGTC 59.882 40.741 13.43 1.37 44.96 3.67
4909 10650 4.477249 TCATCAGAGCCTATCATGAGACA 58.523 43.478 0.09 0.00 0.00 3.41
4910 10651 5.465532 TTCATCAGAGCCTATCATGAGAC 57.534 43.478 0.09 0.00 0.00 3.36
4999 10740 0.329596 GGATGGATACCTCATGGGGC 59.670 60.000 13.00 0.00 40.03 5.80
5113 11270 4.159135 CCTTGGCAAGCTAGACAAAATCAT 59.841 41.667 21.77 0.00 35.78 2.45
5116 11273 3.507622 GTCCTTGGCAAGCTAGACAAAAT 59.492 43.478 21.77 0.00 35.78 1.82
5237 11397 2.032030 CAGTTTTACACCAGCAGAACGG 60.032 50.000 0.00 0.00 0.00 4.44
5278 11438 1.134491 CCCCCTTACCTGAATCACGAC 60.134 57.143 0.00 0.00 0.00 4.34
5401 11568 7.488187 ACTATGCAATGAATCACTGTCATAC 57.512 36.000 0.00 0.00 34.60 2.39
5435 11602 5.011943 AGAGGCTGCAAAATGGACAATAAAA 59.988 36.000 0.50 0.00 0.00 1.52
5570 11737 1.979308 CTCCCTGCTCCATCTCATCAT 59.021 52.381 0.00 0.00 0.00 2.45
5586 11753 1.245732 GCATGCTGGATGATTCTCCC 58.754 55.000 13.68 0.00 33.31 4.30
5811 14429 3.452755 TTGGTACCGTAGATGCTGATG 57.547 47.619 7.57 0.00 0.00 3.07
5969 14701 4.957684 AATATACTCCCTCCGGTCAAAG 57.042 45.455 0.00 0.00 0.00 2.77
6020 14752 6.366332 GCAAGAAACGCAGTAGCTACATATAT 59.634 38.462 25.28 7.18 45.00 0.86
6051 14783 3.529533 CCAAGAGCGAGAATGAGTGAAT 58.470 45.455 0.00 0.00 0.00 2.57
6094 14826 3.323775 TGGGGAGAGTTGGGGATAATAC 58.676 50.000 0.00 0.00 0.00 1.89
6129 14862 8.220559 AGGTAATGGTAATGCATAAAGATCAGT 58.779 33.333 0.00 0.00 0.00 3.41
6130 14863 8.627208 AGGTAATGGTAATGCATAAAGATCAG 57.373 34.615 0.00 0.00 0.00 2.90
6167 14904 3.636153 AATTACCCTGCAGAGGAGAAC 57.364 47.619 23.24 0.00 42.93 3.01
6256 14993 5.781210 TCATCTTCACTATACTGCTCTGG 57.219 43.478 0.00 0.00 0.00 3.86
6392 15134 1.202533 CGACCCTGCACCCTAATACTG 60.203 57.143 0.00 0.00 0.00 2.74
6397 15139 0.616395 TCATCGACCCTGCACCCTAA 60.616 55.000 0.00 0.00 0.00 2.69
6411 15153 4.400845 CACTCAAGCATGTTCTTTCATCG 58.599 43.478 0.00 0.00 0.00 3.84
6447 15193 2.481568 CGCTCTGCACTTCAAAATCTGA 59.518 45.455 0.00 0.00 0.00 3.27
6473 15219 2.939103 CCAGTTACACTATGCCTTGCTC 59.061 50.000 0.00 0.00 0.00 4.26
6507 15254 1.198713 ACCATCACTTCTGAGGCGAT 58.801 50.000 0.00 0.00 0.00 4.58
6509 15256 1.751351 TCTACCATCACTTCTGAGGCG 59.249 52.381 0.00 0.00 0.00 5.52
6510 15257 3.431486 CCTTCTACCATCACTTCTGAGGC 60.431 52.174 0.00 0.00 0.00 4.70
6511 15258 3.772025 ACCTTCTACCATCACTTCTGAGG 59.228 47.826 0.00 0.00 0.00 3.86
6581 15330 4.637483 ATATCATCAAAACAGCAACGGG 57.363 40.909 0.00 0.00 0.00 5.28
6678 15427 6.925610 ATACATGACACACCATATGTTGAC 57.074 37.500 7.32 0.28 40.64 3.18
6688 15437 4.435518 CGTAGCACAAATACATGACACACC 60.436 45.833 0.00 0.00 0.00 4.16
6690 15439 4.561105 TCGTAGCACAAATACATGACACA 58.439 39.130 0.00 0.00 0.00 3.72
6691 15440 4.032900 CCTCGTAGCACAAATACATGACAC 59.967 45.833 0.00 0.00 0.00 3.67
6692 15441 4.081917 TCCTCGTAGCACAAATACATGACA 60.082 41.667 0.00 0.00 0.00 3.58
6696 15445 5.428253 ACATTCCTCGTAGCACAAATACAT 58.572 37.500 0.00 0.00 0.00 2.29
6730 15479 4.890158 TGGTGCTCTTGATCTTCAGTAA 57.110 40.909 0.00 0.00 0.00 2.24
6732 15481 3.996921 ATGGTGCTCTTGATCTTCAGT 57.003 42.857 0.00 0.00 0.00 3.41
6733 15482 4.617808 CAATGGTGCTCTTGATCTTCAG 57.382 45.455 0.00 0.00 0.00 3.02
6749 15498 5.009010 ACAAAGTGTACTCTTCTTGCAATGG 59.991 40.000 10.44 0.00 0.00 3.16
6785 15534 9.263538 CCACATATACAGCATGCAAAAATAAAT 57.736 29.630 21.98 4.22 42.53 1.40
6786 15535 8.256605 ACCACATATACAGCATGCAAAAATAAA 58.743 29.630 21.98 0.00 42.53 1.40
6787 15536 7.705752 CACCACATATACAGCATGCAAAAATAA 59.294 33.333 21.98 0.00 42.53 1.40
6788 15537 7.147932 ACACCACATATACAGCATGCAAAAATA 60.148 33.333 21.98 11.88 42.53 1.40
6789 15538 6.044046 CACCACATATACAGCATGCAAAAAT 58.956 36.000 21.98 10.01 42.53 1.82
6790 15539 5.047448 ACACCACATATACAGCATGCAAAAA 60.047 36.000 21.98 2.19 42.53 1.94
6791 15540 4.462132 ACACCACATATACAGCATGCAAAA 59.538 37.500 21.98 4.23 42.53 2.44
6792 15541 4.015764 ACACCACATATACAGCATGCAAA 58.984 39.130 21.98 4.64 42.53 3.68
6793 15542 3.619419 ACACCACATATACAGCATGCAA 58.381 40.909 21.98 5.05 42.53 4.08
6794 15543 3.280197 ACACCACATATACAGCATGCA 57.720 42.857 21.98 0.00 42.53 3.96
6795 15544 4.142403 ACAAACACCACATATACAGCATGC 60.142 41.667 10.51 10.51 42.53 4.06
6796 15545 5.565592 ACAAACACCACATATACAGCATG 57.434 39.130 0.00 0.00 46.00 4.06
6797 15546 5.709631 TCAACAAACACCACATATACAGCAT 59.290 36.000 0.00 0.00 0.00 3.79
6798 15547 5.066593 TCAACAAACACCACATATACAGCA 58.933 37.500 0.00 0.00 0.00 4.41
6799 15548 5.621197 TCAACAAACACCACATATACAGC 57.379 39.130 0.00 0.00 0.00 4.40
6800 15549 7.803189 GTCTTTCAACAAACACCACATATACAG 59.197 37.037 0.00 0.00 0.00 2.74
6801 15550 7.500892 AGTCTTTCAACAAACACCACATATACA 59.499 33.333 0.00 0.00 0.00 2.29
6802 15551 7.871853 AGTCTTTCAACAAACACCACATATAC 58.128 34.615 0.00 0.00 0.00 1.47
6803 15552 8.458573 AAGTCTTTCAACAAACACCACATATA 57.541 30.769 0.00 0.00 0.00 0.86
6804 15553 6.959639 AGTCTTTCAACAAACACCACATAT 57.040 33.333 0.00 0.00 0.00 1.78
6805 15554 6.767524 AAGTCTTTCAACAAACACCACATA 57.232 33.333 0.00 0.00 0.00 2.29
6809 15558 5.461032 ACAAAGTCTTTCAACAAACACCA 57.539 34.783 0.00 0.00 0.00 4.17
6810 15559 6.779115 AAACAAAGTCTTTCAACAAACACC 57.221 33.333 0.00 0.00 0.00 4.16
6815 15564 5.241662 CCCCAAAACAAAGTCTTTCAACAA 58.758 37.500 0.00 0.00 0.00 2.83
6872 15660 4.517285 TCCAATTCCTCTCAATTTCGAGG 58.483 43.478 11.84 11.84 46.52 4.63
6876 15664 5.047802 TGCACTTCCAATTCCTCTCAATTTC 60.048 40.000 0.00 0.00 0.00 2.17
6926 15714 9.857656 AGATAAATGTGGTTTCTACATCATCAT 57.142 29.630 15.59 0.00 37.77 2.45
6927 15715 9.112725 CAGATAAATGTGGTTTCTACATCATCA 57.887 33.333 15.59 0.00 37.77 3.07
6950 15738 6.619437 TCCAAGGATCTTTCCAATATACCAGA 59.381 38.462 0.00 0.00 45.30 3.86
6992 15780 1.070445 CTAAGGATCTGAGCCAGCTGG 59.930 57.143 29.34 29.34 38.53 4.85
6993 15781 1.761784 ACTAAGGATCTGAGCCAGCTG 59.238 52.381 15.24 6.78 0.00 4.24
6994 15782 2.038659 GACTAAGGATCTGAGCCAGCT 58.961 52.381 15.24 0.00 0.00 4.24
6995 15783 1.759445 TGACTAAGGATCTGAGCCAGC 59.241 52.381 15.24 1.52 0.00 4.85
6996 15784 2.762887 TGTGACTAAGGATCTGAGCCAG 59.237 50.000 15.24 6.24 0.00 4.85
6997 15785 2.497675 GTGTGACTAAGGATCTGAGCCA 59.502 50.000 15.24 0.00 0.00 4.75
6998 15786 2.763448 AGTGTGACTAAGGATCTGAGCC 59.237 50.000 3.15 3.15 0.00 4.70
6999 15787 4.464069 AAGTGTGACTAAGGATCTGAGC 57.536 45.455 0.00 0.00 0.00 4.26
7000 15788 5.451242 GCCTAAGTGTGACTAAGGATCTGAG 60.451 48.000 0.00 0.00 0.00 3.35
7001 15789 4.402793 GCCTAAGTGTGACTAAGGATCTGA 59.597 45.833 0.00 0.00 0.00 3.27
7002 15790 4.442192 GGCCTAAGTGTGACTAAGGATCTG 60.442 50.000 0.00 0.00 0.00 2.90
7003 15791 3.707102 GGCCTAAGTGTGACTAAGGATCT 59.293 47.826 0.00 0.00 0.00 2.75
7004 15792 3.181464 GGGCCTAAGTGTGACTAAGGATC 60.181 52.174 0.84 0.00 0.00 3.36
7005 15793 2.772515 GGGCCTAAGTGTGACTAAGGAT 59.227 50.000 0.84 0.00 0.00 3.24
7006 15794 2.185387 GGGCCTAAGTGTGACTAAGGA 58.815 52.381 0.84 0.00 0.00 3.36
7007 15795 1.209747 GGGGCCTAAGTGTGACTAAGG 59.790 57.143 0.84 0.00 0.00 2.69
7008 15796 1.134788 CGGGGCCTAAGTGTGACTAAG 60.135 57.143 0.84 0.00 0.00 2.18
7009 15797 0.899720 CGGGGCCTAAGTGTGACTAA 59.100 55.000 0.84 0.00 0.00 2.24
7010 15798 0.251922 ACGGGGCCTAAGTGTGACTA 60.252 55.000 0.84 0.00 0.00 2.59
7011 15799 1.125711 AACGGGGCCTAAGTGTGACT 61.126 55.000 0.84 0.00 0.00 3.41
7012 15800 0.672711 GAACGGGGCCTAAGTGTGAC 60.673 60.000 0.84 0.00 0.00 3.67
7013 15801 1.675219 GAACGGGGCCTAAGTGTGA 59.325 57.895 0.84 0.00 0.00 3.58
7014 15802 1.740296 CGAACGGGGCCTAAGTGTG 60.740 63.158 0.84 0.00 0.00 3.82
7015 15803 2.660802 CGAACGGGGCCTAAGTGT 59.339 61.111 0.84 0.00 0.00 3.55
7016 15804 2.125269 CCGAACGGGGCCTAAGTG 60.125 66.667 0.84 0.00 0.00 3.16
7032 15820 1.749033 CTAGGAGCGGTGGATTCCC 59.251 63.158 0.00 0.00 0.00 3.97
7033 15821 0.759436 TCCTAGGAGCGGTGGATTCC 60.759 60.000 7.62 0.00 0.00 3.01
7034 15822 1.273886 GATCCTAGGAGCGGTGGATTC 59.726 57.143 18.34 2.46 39.19 2.52
7035 15823 1.133009 AGATCCTAGGAGCGGTGGATT 60.133 52.381 20.98 0.00 39.19 3.01
7036 15824 0.485099 AGATCCTAGGAGCGGTGGAT 59.515 55.000 20.98 4.04 41.49 3.41
7037 15825 0.468214 CAGATCCTAGGAGCGGTGGA 60.468 60.000 20.98 0.00 35.44 4.02
7038 15826 0.757188 ACAGATCCTAGGAGCGGTGG 60.757 60.000 28.51 17.87 37.53 4.61
7039 15827 0.387202 CACAGATCCTAGGAGCGGTG 59.613 60.000 34.97 34.97 46.10 4.94
7040 15828 0.757188 CCACAGATCCTAGGAGCGGT 60.757 60.000 24.66 24.66 39.29 5.68
7041 15829 0.468214 TCCACAGATCCTAGGAGCGG 60.468 60.000 23.33 23.33 35.44 5.52
7042 15830 0.958091 CTCCACAGATCCTAGGAGCG 59.042 60.000 20.98 17.35 40.98 5.03
7045 15833 0.468214 CCGCTCCACAGATCCTAGGA 60.468 60.000 15.46 15.46 0.00 2.94
7046 15834 2.045280 CCGCTCCACAGATCCTAGG 58.955 63.158 0.82 0.82 0.00 3.02
7047 15835 1.112315 AGCCGCTCCACAGATCCTAG 61.112 60.000 0.00 0.00 0.00 3.02
7048 15836 1.075970 AGCCGCTCCACAGATCCTA 60.076 57.895 0.00 0.00 0.00 2.94
7049 15837 2.364842 AGCCGCTCCACAGATCCT 60.365 61.111 0.00 0.00 0.00 3.24
7050 15838 2.202987 CAGCCGCTCCACAGATCC 60.203 66.667 0.00 0.00 0.00 3.36
7051 15839 0.674895 AAACAGCCGCTCCACAGATC 60.675 55.000 0.00 0.00 0.00 2.75
7052 15840 0.957395 CAAACAGCCGCTCCACAGAT 60.957 55.000 0.00 0.00 0.00 2.90
7053 15841 1.597854 CAAACAGCCGCTCCACAGA 60.598 57.895 0.00 0.00 0.00 3.41
7054 15842 2.949106 CAAACAGCCGCTCCACAG 59.051 61.111 0.00 0.00 0.00 3.66
7055 15843 3.286751 GCAAACAGCCGCTCCACA 61.287 61.111 0.00 0.00 37.23 4.17
7059 15847 1.743252 AGCTAGCAAACAGCCGCTC 60.743 57.895 18.83 0.00 44.23 5.03
7064 15852 2.969628 TCTAGGAGCTAGCAAACAGC 57.030 50.000 18.83 0.00 46.19 4.40
7065 15853 5.448360 GCAAAATCTAGGAGCTAGCAAACAG 60.448 44.000 18.83 8.67 34.36 3.16
7066 15854 4.396166 GCAAAATCTAGGAGCTAGCAAACA 59.604 41.667 18.83 0.00 34.36 2.83
7067 15855 4.396166 TGCAAAATCTAGGAGCTAGCAAAC 59.604 41.667 18.83 6.35 34.36 2.93
7068 15856 4.396166 GTGCAAAATCTAGGAGCTAGCAAA 59.604 41.667 18.83 0.00 34.36 3.68
7069 15857 3.941483 GTGCAAAATCTAGGAGCTAGCAA 59.059 43.478 18.83 0.00 34.36 3.91
7070 15858 3.198635 AGTGCAAAATCTAGGAGCTAGCA 59.801 43.478 18.83 0.00 34.36 3.49
7071 15859 3.802866 AGTGCAAAATCTAGGAGCTAGC 58.197 45.455 6.62 6.62 34.36 3.42
7072 15860 5.907207 TGTAGTGCAAAATCTAGGAGCTAG 58.093 41.667 0.00 0.00 35.57 3.42
7073 15861 5.682471 GCTGTAGTGCAAAATCTAGGAGCTA 60.682 44.000 0.00 0.00 0.00 3.32
7074 15862 4.764172 CTGTAGTGCAAAATCTAGGAGCT 58.236 43.478 0.00 0.00 0.00 4.09
7075 15863 3.311048 GCTGTAGTGCAAAATCTAGGAGC 59.689 47.826 0.00 0.00 0.00 4.70
7076 15864 4.764172 AGCTGTAGTGCAAAATCTAGGAG 58.236 43.478 0.00 0.00 34.99 3.69
7077 15865 4.383118 GGAGCTGTAGTGCAAAATCTAGGA 60.383 45.833 0.00 0.00 34.99 2.94
7078 15866 3.873952 GGAGCTGTAGTGCAAAATCTAGG 59.126 47.826 0.00 0.00 34.99 3.02
7079 15867 3.553511 CGGAGCTGTAGTGCAAAATCTAG 59.446 47.826 0.00 0.00 34.99 2.43
7080 15868 3.056107 ACGGAGCTGTAGTGCAAAATCTA 60.056 43.478 0.00 0.00 34.99 1.98
7081 15869 2.289694 ACGGAGCTGTAGTGCAAAATCT 60.290 45.455 0.00 0.00 34.99 2.40
7082 15870 2.076863 ACGGAGCTGTAGTGCAAAATC 58.923 47.619 0.00 0.00 34.99 2.17
7083 15871 2.076863 GACGGAGCTGTAGTGCAAAAT 58.923 47.619 0.00 0.00 34.99 1.82
7084 15872 1.508632 GACGGAGCTGTAGTGCAAAA 58.491 50.000 0.00 0.00 34.99 2.44
7085 15873 0.320421 GGACGGAGCTGTAGTGCAAA 60.320 55.000 0.00 0.00 34.99 3.68
7086 15874 1.292223 GGACGGAGCTGTAGTGCAA 59.708 57.895 0.00 0.00 34.99 4.08
7087 15875 2.970639 GGACGGAGCTGTAGTGCA 59.029 61.111 0.00 0.00 34.99 4.57
7088 15876 2.202623 CGGACGGAGCTGTAGTGC 60.203 66.667 0.00 0.00 0.00 4.40
7089 15877 2.202623 GCGGACGGAGCTGTAGTG 60.203 66.667 0.00 0.00 0.00 2.74
7090 15878 2.361357 AGCGGACGGAGCTGTAGT 60.361 61.111 0.00 0.00 44.22 2.73
7091 15879 2.409651 GAGCGGACGGAGCTGTAG 59.590 66.667 6.28 0.00 46.13 2.74
7092 15880 3.138798 GGAGCGGACGGAGCTGTA 61.139 66.667 6.28 0.00 46.13 2.74
7111 15899 4.828925 GCTCCACGGCTCTGCTCC 62.829 72.222 0.00 0.00 0.00 4.70
7121 15909 2.179517 GAGTCACTCCGCTCCACG 59.820 66.667 0.00 0.00 43.15 4.94
7129 15917 1.592223 CCCTGTTCGGAGTCACTCC 59.408 63.158 14.67 14.67 46.44 3.85
7130 15918 1.079750 GCCCTGTTCGGAGTCACTC 60.080 63.158 0.00 0.00 33.16 3.51
7131 15919 2.584391 GGCCCTGTTCGGAGTCACT 61.584 63.158 0.00 0.00 33.16 3.41
7132 15920 2.047179 GGCCCTGTTCGGAGTCAC 60.047 66.667 0.00 0.00 33.16 3.67
7133 15921 0.543410 TAAGGCCCTGTTCGGAGTCA 60.543 55.000 0.00 0.00 33.16 3.41
7134 15922 0.175989 CTAAGGCCCTGTTCGGAGTC 59.824 60.000 0.00 0.00 33.16 3.36
7135 15923 0.544595 ACTAAGGCCCTGTTCGGAGT 60.545 55.000 0.00 0.00 33.16 3.85
7136 15924 0.108138 CACTAAGGCCCTGTTCGGAG 60.108 60.000 0.00 0.00 33.16 4.63
7137 15925 1.550130 CCACTAAGGCCCTGTTCGGA 61.550 60.000 0.00 0.00 33.16 4.55
7138 15926 1.078426 CCACTAAGGCCCTGTTCGG 60.078 63.158 0.00 0.00 0.00 4.30
7139 15927 4.617875 CCACTAAGGCCCTGTTCG 57.382 61.111 0.00 0.00 0.00 3.95
7148 15936 3.418684 AGTAACTGGTTGCCACTAAGG 57.581 47.619 0.00 0.00 41.84 2.69
7149 15937 8.732746 AATAATAGTAACTGGTTGCCACTAAG 57.267 34.615 0.00 0.00 0.00 2.18
7150 15938 8.322828 TGAATAATAGTAACTGGTTGCCACTAA 58.677 33.333 0.00 0.00 0.00 2.24
7151 15939 7.767198 GTGAATAATAGTAACTGGTTGCCACTA 59.233 37.037 0.00 0.00 0.00 2.74
7152 15940 6.598064 GTGAATAATAGTAACTGGTTGCCACT 59.402 38.462 0.00 0.00 0.00 4.00
7153 15941 6.183360 GGTGAATAATAGTAACTGGTTGCCAC 60.183 42.308 0.00 0.00 0.00 5.01
7154 15942 5.883673 GGTGAATAATAGTAACTGGTTGCCA 59.116 40.000 0.00 0.00 0.00 4.92
7155 15943 5.883673 TGGTGAATAATAGTAACTGGTTGCC 59.116 40.000 0.00 0.00 0.00 4.52
7156 15944 6.995511 TGGTGAATAATAGTAACTGGTTGC 57.004 37.500 0.00 0.00 0.00 4.17
7157 15945 8.964476 AGATGGTGAATAATAGTAACTGGTTG 57.036 34.615 0.00 0.00 0.00 3.77
7159 15947 9.435570 ACTAGATGGTGAATAATAGTAACTGGT 57.564 33.333 0.00 0.00 0.00 4.00
7163 15951 9.837525 CGGTACTAGATGGTGAATAATAGTAAC 57.162 37.037 0.00 0.00 32.40 2.50
7164 15952 8.517878 GCGGTACTAGATGGTGAATAATAGTAA 58.482 37.037 0.00 0.00 30.52 2.24
7165 15953 7.121759 GGCGGTACTAGATGGTGAATAATAGTA 59.878 40.741 0.00 0.00 0.00 1.82
7166 15954 6.071503 GGCGGTACTAGATGGTGAATAATAGT 60.072 42.308 0.00 0.00 0.00 2.12
7167 15955 6.331061 GGCGGTACTAGATGGTGAATAATAG 58.669 44.000 0.00 0.00 0.00 1.73
7168 15956 5.186409 GGGCGGTACTAGATGGTGAATAATA 59.814 44.000 0.00 0.00 0.00 0.98
7169 15957 4.020485 GGGCGGTACTAGATGGTGAATAAT 60.020 45.833 0.00 0.00 0.00 1.28
7170 15958 3.322828 GGGCGGTACTAGATGGTGAATAA 59.677 47.826 0.00 0.00 0.00 1.40
7171 15959 2.895404 GGGCGGTACTAGATGGTGAATA 59.105 50.000 0.00 0.00 0.00 1.75
7172 15960 1.692519 GGGCGGTACTAGATGGTGAAT 59.307 52.381 0.00 0.00 0.00 2.57
7173 15961 1.117150 GGGCGGTACTAGATGGTGAA 58.883 55.000 0.00 0.00 0.00 3.18
7174 15962 0.260816 AGGGCGGTACTAGATGGTGA 59.739 55.000 0.00 0.00 0.00 4.02
7175 15963 1.612463 GTAGGGCGGTACTAGATGGTG 59.388 57.143 0.00 0.00 0.00 4.17
7176 15964 1.480127 GGTAGGGCGGTACTAGATGGT 60.480 57.143 0.00 0.00 0.00 3.55
7177 15965 1.254954 GGTAGGGCGGTACTAGATGG 58.745 60.000 0.00 0.00 0.00 3.51
7178 15966 1.991121 TGGTAGGGCGGTACTAGATG 58.009 55.000 0.00 0.00 0.00 2.90
7179 15967 2.109480 TCATGGTAGGGCGGTACTAGAT 59.891 50.000 0.00 0.00 0.00 1.98
7180 15968 1.496001 TCATGGTAGGGCGGTACTAGA 59.504 52.381 0.00 0.00 0.00 2.43
7181 15969 1.991121 TCATGGTAGGGCGGTACTAG 58.009 55.000 0.00 0.00 0.00 2.57
7182 15970 2.457813 TTCATGGTAGGGCGGTACTA 57.542 50.000 0.00 0.00 0.00 1.82
7183 15971 1.416401 CATTCATGGTAGGGCGGTACT 59.584 52.381 0.00 0.00 0.00 2.73
7184 15972 1.140252 ACATTCATGGTAGGGCGGTAC 59.860 52.381 0.00 0.00 0.00 3.34
7185 15973 1.502690 ACATTCATGGTAGGGCGGTA 58.497 50.000 0.00 0.00 0.00 4.02
7186 15974 0.623723 AACATTCATGGTAGGGCGGT 59.376 50.000 0.00 0.00 0.00 5.68
7187 15975 2.631160 TAACATTCATGGTAGGGCGG 57.369 50.000 0.00 0.00 0.00 6.13
7188 15976 2.878406 CCTTAACATTCATGGTAGGGCG 59.122 50.000 0.34 0.00 39.83 6.13
7191 15979 3.632145 GCCACCTTAACATTCATGGTAGG 59.368 47.826 0.00 0.00 30.57 3.18
7192 15980 4.269183 TGCCACCTTAACATTCATGGTAG 58.731 43.478 0.00 0.00 30.57 3.18
7193 15981 4.308526 TGCCACCTTAACATTCATGGTA 57.691 40.909 0.00 0.00 0.00 3.25
7194 15982 3.168035 TGCCACCTTAACATTCATGGT 57.832 42.857 0.00 0.00 0.00 3.55
7195 15983 3.368323 GGTTGCCACCTTAACATTCATGG 60.368 47.826 0.00 0.00 40.44 3.66
7196 15984 3.257873 TGGTTGCCACCTTAACATTCATG 59.742 43.478 8.65 0.00 44.61 3.07
7197 15985 3.505386 TGGTTGCCACCTTAACATTCAT 58.495 40.909 8.65 0.00 44.61 2.57
7198 15986 2.890311 CTGGTTGCCACCTTAACATTCA 59.110 45.455 8.65 0.00 44.61 2.57
7199 15987 2.231235 CCTGGTTGCCACCTTAACATTC 59.769 50.000 8.65 0.00 44.61 2.67
7200 15988 2.247358 CCTGGTTGCCACCTTAACATT 58.753 47.619 8.65 0.00 44.61 2.71
7201 15989 1.146982 ACCTGGTTGCCACCTTAACAT 59.853 47.619 8.65 0.00 44.61 2.71
7202 15990 0.553819 ACCTGGTTGCCACCTTAACA 59.446 50.000 8.65 0.00 44.61 2.41
7203 15991 0.958822 CACCTGGTTGCCACCTTAAC 59.041 55.000 8.65 0.00 44.61 2.01
7204 15992 0.553819 ACACCTGGTTGCCACCTTAA 59.446 50.000 8.65 0.00 44.61 1.85
7205 15993 1.436326 TACACCTGGTTGCCACCTTA 58.564 50.000 8.65 0.00 44.61 2.69
7206 15994 0.553819 TTACACCTGGTTGCCACCTT 59.446 50.000 8.65 0.00 44.61 3.50
7207 15995 0.777446 ATTACACCTGGTTGCCACCT 59.223 50.000 8.65 0.00 44.61 4.00
7208 15996 1.627864 AATTACACCTGGTTGCCACC 58.372 50.000 0.00 0.00 44.56 4.61
7209 15997 4.461081 TGAATAATTACACCTGGTTGCCAC 59.539 41.667 0.00 0.00 0.00 5.01
7210 15998 4.461081 GTGAATAATTACACCTGGTTGCCA 59.539 41.667 0.00 0.00 0.00 4.92
7211 15999 4.993905 GTGAATAATTACACCTGGTTGCC 58.006 43.478 0.00 0.00 0.00 4.52
7220 16008 7.657761 AGAGAATCCGATGGTGAATAATTACAC 59.342 37.037 0.00 0.00 33.66 2.90
7221 16009 7.657354 CAGAGAATCCGATGGTGAATAATTACA 59.343 37.037 0.00 0.00 33.66 2.41
7222 16010 7.360438 GCAGAGAATCCGATGGTGAATAATTAC 60.360 40.741 0.00 0.00 33.66 1.89
7223 16011 6.650807 GCAGAGAATCCGATGGTGAATAATTA 59.349 38.462 0.00 0.00 33.66 1.40
7224 16012 5.471456 GCAGAGAATCCGATGGTGAATAATT 59.529 40.000 0.00 0.00 33.66 1.40
7225 16013 4.999950 GCAGAGAATCCGATGGTGAATAAT 59.000 41.667 0.00 0.00 33.66 1.28
7226 16014 4.101585 AGCAGAGAATCCGATGGTGAATAA 59.898 41.667 0.00 0.00 33.66 1.40
7227 16015 3.643320 AGCAGAGAATCCGATGGTGAATA 59.357 43.478 0.00 0.00 33.66 1.75
7228 16016 2.437281 AGCAGAGAATCCGATGGTGAAT 59.563 45.455 0.00 0.00 33.66 2.57
7229 16017 1.833630 AGCAGAGAATCCGATGGTGAA 59.166 47.619 0.00 0.00 33.66 3.18
7230 16018 1.410517 GAGCAGAGAATCCGATGGTGA 59.589 52.381 0.00 0.00 33.66 4.02
7231 16019 1.411977 AGAGCAGAGAATCCGATGGTG 59.588 52.381 0.00 0.00 33.66 4.17
7232 16020 1.786937 AGAGCAGAGAATCCGATGGT 58.213 50.000 0.00 0.00 33.66 3.55
7233 16021 2.364970 AGAAGAGCAGAGAATCCGATGG 59.635 50.000 0.00 0.00 33.66 3.51
7234 16022 3.731652 AGAAGAGCAGAGAATCCGATG 57.268 47.619 0.00 0.00 33.66 3.84
7235 16023 4.440880 CAAAGAAGAGCAGAGAATCCGAT 58.559 43.478 0.00 0.00 33.66 4.18
7236 16024 3.368843 CCAAAGAAGAGCAGAGAATCCGA 60.369 47.826 0.00 0.00 33.66 4.55
7237 16025 2.935201 CCAAAGAAGAGCAGAGAATCCG 59.065 50.000 0.00 0.00 33.66 4.18
7238 16026 4.213564 TCCAAAGAAGAGCAGAGAATCC 57.786 45.455 0.00 0.00 33.66 3.01
7239 16027 5.294060 GTCATCCAAAGAAGAGCAGAGAATC 59.706 44.000 0.00 0.00 0.00 2.52
7240 16028 5.184711 GTCATCCAAAGAAGAGCAGAGAAT 58.815 41.667 0.00 0.00 0.00 2.40
7241 16029 4.040829 TGTCATCCAAAGAAGAGCAGAGAA 59.959 41.667 0.00 0.00 0.00 2.87
7242 16030 3.580022 TGTCATCCAAAGAAGAGCAGAGA 59.420 43.478 0.00 0.00 0.00 3.10
7243 16031 3.935315 TGTCATCCAAAGAAGAGCAGAG 58.065 45.455 0.00 0.00 0.00 3.35
7244 16032 4.019950 TGATGTCATCCAAAGAAGAGCAGA 60.020 41.667 10.36 0.00 0.00 4.26
7245 16033 4.259356 TGATGTCATCCAAAGAAGAGCAG 58.741 43.478 10.36 0.00 0.00 4.24
7246 16034 4.290711 TGATGTCATCCAAAGAAGAGCA 57.709 40.909 10.36 0.00 0.00 4.26
7247 16035 5.421212 GATGATGTCATCCAAAGAAGAGC 57.579 43.478 10.36 0.00 45.24 4.09
7257 16045 5.991369 TGCAATGCACAGATGATGTCATCC 61.991 45.833 17.07 5.09 42.77 3.51
7258 16046 3.066203 TGCAATGCACAGATGATGTCATC 59.934 43.478 2.72 13.76 41.41 2.92
7259 16047 3.020984 TGCAATGCACAGATGATGTCAT 58.979 40.909 2.72 0.00 41.41 3.06
7260 16048 2.438411 TGCAATGCACAGATGATGTCA 58.562 42.857 2.72 0.00 41.41 3.58
7261 16049 3.497297 TTGCAATGCACAGATGATGTC 57.503 42.857 7.72 0.00 41.41 3.06
7262 16050 3.845178 CTTTGCAATGCACAGATGATGT 58.155 40.909 15.64 0.00 45.43 3.06
7263 16051 2.603110 GCTTTGCAATGCACAGATGATG 59.397 45.455 27.13 4.90 38.46 3.07
7264 16052 2.496070 AGCTTTGCAATGCACAGATGAT 59.504 40.909 31.53 11.69 38.46 2.45
7265 16053 1.890489 AGCTTTGCAATGCACAGATGA 59.110 42.857 31.53 0.00 38.46 2.92
7266 16054 1.992667 CAGCTTTGCAATGCACAGATG 59.007 47.619 31.53 22.30 44.08 2.90
7267 16055 1.616865 ACAGCTTTGCAATGCACAGAT 59.383 42.857 31.53 15.77 38.46 2.90
7268 16056 1.034356 ACAGCTTTGCAATGCACAGA 58.966 45.000 31.53 5.36 38.46 3.41
7269 16057 1.860676 AACAGCTTTGCAATGCACAG 58.139 45.000 31.53 23.72 38.71 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.