Multiple sequence alignment - TraesCS3A01G008400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G008400 | chr3A | 100.000 | 2549 | 0 | 0 | 1 | 2549 | 8151210 | 8148662 | 0.000000e+00 | 4708.0 |
1 | TraesCS3A01G008400 | chr3A | 87.205 | 297 | 34 | 4 | 291 | 587 | 8153316 | 8153608 | 4.060000e-88 | 335.0 |
2 | TraesCS3A01G008400 | chr3A | 90.995 | 211 | 14 | 5 | 2102 | 2310 | 709970242 | 709970449 | 1.930000e-71 | 279.0 |
3 | TraesCS3A01G008400 | chr3A | 85.306 | 245 | 27 | 4 | 6 | 241 | 8153070 | 8153314 | 7.040000e-61 | 244.0 |
4 | TraesCS3A01G008400 | chr3A | 87.234 | 188 | 24 | 0 | 1922 | 2109 | 709969856 | 709970043 | 5.520000e-52 | 215.0 |
5 | TraesCS3A01G008400 | chr3D | 86.994 | 1384 | 125 | 12 | 940 | 2310 | 1135488 | 1136829 | 0.000000e+00 | 1507.0 |
6 | TraesCS3A01G008400 | chr3D | 86.861 | 959 | 82 | 21 | 589 | 1541 | 1132491 | 1131571 | 0.000000e+00 | 1033.0 |
7 | TraesCS3A01G008400 | chr3D | 87.047 | 579 | 72 | 3 | 6 | 583 | 1130957 | 1130381 | 0.000000e+00 | 651.0 |
8 | TraesCS3A01G008400 | chr3D | 84.424 | 321 | 25 | 9 | 590 | 896 | 1135177 | 1135486 | 2.480000e-75 | 292.0 |
9 | TraesCS3A01G008400 | chr3D | 94.512 | 164 | 7 | 2 | 2367 | 2529 | 1137732 | 1137894 | 4.210000e-63 | 252.0 |
10 | TraesCS3A01G008400 | chr3D | 95.238 | 42 | 0 | 2 | 792 | 833 | 1135404 | 1135443 | 5.890000e-07 | 65.8 |
11 | TraesCS3A01G008400 | chr1D | 88.801 | 634 | 39 | 12 | 1561 | 2194 | 460739224 | 460739825 | 0.000000e+00 | 749.0 |
12 | TraesCS3A01G008400 | chr7D | 88.644 | 634 | 40 | 12 | 1561 | 2194 | 632125898 | 632126499 | 0.000000e+00 | 743.0 |
13 | TraesCS3A01G008400 | chr7D | 88.328 | 634 | 42 | 12 | 1561 | 2194 | 394262505 | 394261904 | 0.000000e+00 | 732.0 |
14 | TraesCS3A01G008400 | chr6D | 88.328 | 634 | 42 | 12 | 1561 | 2194 | 466530504 | 466529903 | 0.000000e+00 | 732.0 |
15 | TraesCS3A01G008400 | chr6D | 87.608 | 581 | 65 | 4 | 6 | 583 | 410167106 | 410167682 | 0.000000e+00 | 667.0 |
16 | TraesCS3A01G008400 | chr6D | 88.144 | 194 | 16 | 6 | 2122 | 2310 | 451077582 | 451077391 | 9.180000e-55 | 224.0 |
17 | TraesCS3A01G008400 | chr7A | 88.013 | 634 | 45 | 10 | 1561 | 2194 | 721733073 | 721732471 | 0.000000e+00 | 721.0 |
18 | TraesCS3A01G008400 | chr4A | 88.013 | 634 | 45 | 9 | 1561 | 2194 | 618092436 | 618091834 | 0.000000e+00 | 721.0 |
19 | TraesCS3A01G008400 | chr4A | 93.069 | 101 | 6 | 1 | 2102 | 2202 | 684071062 | 684071161 | 2.040000e-31 | 147.0 |
20 | TraesCS3A01G008400 | chr7B | 87.855 | 634 | 46 | 11 | 1561 | 2194 | 706495824 | 706496426 | 0.000000e+00 | 715.0 |
21 | TraesCS3A01G008400 | chr7B | 81.238 | 533 | 63 | 22 | 52 | 583 | 727897990 | 727897494 | 1.840000e-106 | 396.0 |
22 | TraesCS3A01G008400 | chr7B | 80.827 | 532 | 66 | 21 | 52 | 583 | 727924793 | 727924298 | 3.980000e-103 | 385.0 |
23 | TraesCS3A01G008400 | chr3B | 87.697 | 634 | 47 | 9 | 1561 | 2194 | 393318326 | 393317724 | 0.000000e+00 | 710.0 |
24 | TraesCS3A01G008400 | chr3B | 93.069 | 101 | 6 | 1 | 2102 | 2202 | 771792141 | 771792240 | 2.040000e-31 | 147.0 |
25 | TraesCS3A01G008400 | chr6A | 89.785 | 558 | 42 | 6 | 1561 | 2118 | 19305512 | 19306054 | 0.000000e+00 | 701.0 |
26 | TraesCS3A01G008400 | chr6A | 90.000 | 530 | 37 | 9 | 1745 | 2272 | 60541245 | 60541760 | 0.000000e+00 | 671.0 |
27 | TraesCS3A01G008400 | chr6A | 85.377 | 424 | 50 | 3 | 160 | 580 | 555663992 | 555664406 | 1.810000e-116 | 429.0 |
28 | TraesCS3A01G008400 | chr5A | 87.224 | 634 | 50 | 9 | 1561 | 2194 | 104239161 | 104238559 | 0.000000e+00 | 693.0 |
29 | TraesCS3A01G008400 | chr2A | 87.066 | 634 | 51 | 9 | 1561 | 2194 | 745587139 | 745587741 | 0.000000e+00 | 688.0 |
30 | TraesCS3A01G008400 | chr2A | 90.047 | 211 | 17 | 4 | 2102 | 2310 | 765959395 | 765959603 | 1.160000e-68 | 270.0 |
31 | TraesCS3A01G008400 | chr6B | 83.636 | 385 | 62 | 1 | 6 | 389 | 617094537 | 617094921 | 6.700000e-96 | 361.0 |
32 | TraesCS3A01G008400 | chr6B | 87.402 | 127 | 13 | 2 | 383 | 509 | 617105258 | 617105381 | 2.640000e-30 | 143.0 |
33 | TraesCS3A01G008400 | chr4D | 90.995 | 211 | 15 | 4 | 2102 | 2310 | 497909561 | 497909353 | 5.370000e-72 | 281.0 |
34 | TraesCS3A01G008400 | chr5B | 92.000 | 100 | 7 | 1 | 2103 | 2202 | 3915960 | 3916058 | 3.420000e-29 | 139.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G008400 | chr3A | 8148662 | 8151210 | 2548 | True | 4708.0 | 4708 | 100.0000 | 1 | 2549 | 1 | chr3A.!!$R1 | 2548 |
1 | TraesCS3A01G008400 | chr3A | 8153070 | 8153608 | 538 | False | 289.5 | 335 | 86.2555 | 6 | 587 | 2 | chr3A.!!$F1 | 581 |
2 | TraesCS3A01G008400 | chr3A | 709969856 | 709970449 | 593 | False | 247.0 | 279 | 89.1145 | 1922 | 2310 | 2 | chr3A.!!$F2 | 388 |
3 | TraesCS3A01G008400 | chr3D | 1130381 | 1132491 | 2110 | True | 842.0 | 1033 | 86.9540 | 6 | 1541 | 2 | chr3D.!!$R1 | 1535 |
4 | TraesCS3A01G008400 | chr3D | 1135177 | 1137894 | 2717 | False | 529.2 | 1507 | 90.2920 | 590 | 2529 | 4 | chr3D.!!$F1 | 1939 |
5 | TraesCS3A01G008400 | chr1D | 460739224 | 460739825 | 601 | False | 749.0 | 749 | 88.8010 | 1561 | 2194 | 1 | chr1D.!!$F1 | 633 |
6 | TraesCS3A01G008400 | chr7D | 632125898 | 632126499 | 601 | False | 743.0 | 743 | 88.6440 | 1561 | 2194 | 1 | chr7D.!!$F1 | 633 |
7 | TraesCS3A01G008400 | chr7D | 394261904 | 394262505 | 601 | True | 732.0 | 732 | 88.3280 | 1561 | 2194 | 1 | chr7D.!!$R1 | 633 |
8 | TraesCS3A01G008400 | chr6D | 466529903 | 466530504 | 601 | True | 732.0 | 732 | 88.3280 | 1561 | 2194 | 1 | chr6D.!!$R2 | 633 |
9 | TraesCS3A01G008400 | chr6D | 410167106 | 410167682 | 576 | False | 667.0 | 667 | 87.6080 | 6 | 583 | 1 | chr6D.!!$F1 | 577 |
10 | TraesCS3A01G008400 | chr7A | 721732471 | 721733073 | 602 | True | 721.0 | 721 | 88.0130 | 1561 | 2194 | 1 | chr7A.!!$R1 | 633 |
11 | TraesCS3A01G008400 | chr4A | 618091834 | 618092436 | 602 | True | 721.0 | 721 | 88.0130 | 1561 | 2194 | 1 | chr4A.!!$R1 | 633 |
12 | TraesCS3A01G008400 | chr7B | 706495824 | 706496426 | 602 | False | 715.0 | 715 | 87.8550 | 1561 | 2194 | 1 | chr7B.!!$F1 | 633 |
13 | TraesCS3A01G008400 | chr3B | 393317724 | 393318326 | 602 | True | 710.0 | 710 | 87.6970 | 1561 | 2194 | 1 | chr3B.!!$R1 | 633 |
14 | TraesCS3A01G008400 | chr6A | 19305512 | 19306054 | 542 | False | 701.0 | 701 | 89.7850 | 1561 | 2118 | 1 | chr6A.!!$F1 | 557 |
15 | TraesCS3A01G008400 | chr6A | 60541245 | 60541760 | 515 | False | 671.0 | 671 | 90.0000 | 1745 | 2272 | 1 | chr6A.!!$F2 | 527 |
16 | TraesCS3A01G008400 | chr5A | 104238559 | 104239161 | 602 | True | 693.0 | 693 | 87.2240 | 1561 | 2194 | 1 | chr5A.!!$R1 | 633 |
17 | TraesCS3A01G008400 | chr2A | 745587139 | 745587741 | 602 | False | 688.0 | 688 | 87.0660 | 1561 | 2194 | 1 | chr2A.!!$F1 | 633 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
693 | 705 | 0.306533 | CGGTGTTGTTTTCCCTGACG | 59.693 | 55.0 | 0.0 | 0.0 | 0.0 | 4.35 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1627 | 1833 | 0.764369 | ACACCAAGGGCACTCTCTCA | 60.764 | 55.0 | 0.0 | 0.0 | 0.0 | 3.27 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
31 | 32 | 5.473796 | TTCACCTAACAACGAGTTGAAAC | 57.526 | 39.130 | 21.14 | 0.00 | 42.93 | 2.78 |
34 | 35 | 4.569162 | CACCTAACAACGAGTTGAAACTGA | 59.431 | 41.667 | 21.14 | 0.99 | 42.93 | 3.41 |
39 | 40 | 4.451900 | ACAACGAGTTGAAACTGAGGAAT | 58.548 | 39.130 | 21.14 | 0.00 | 42.93 | 3.01 |
69 | 70 | 3.862267 | CAGCAGACGATTTAGAAGACCTG | 59.138 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
75 | 76 | 3.195825 | ACGATTTAGAAGACCTGGACCTG | 59.804 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
77 | 78 | 3.269592 | TTTAGAAGACCTGGACCTGGA | 57.730 | 47.619 | 23.36 | 0.00 | 0.00 | 3.86 |
91 | 92 | 2.264124 | CTGGAAGGAGACGACCGAA | 58.736 | 57.895 | 0.00 | 0.00 | 34.13 | 4.30 |
109 | 117 | 2.557317 | GAAACAACAACGGAGGAGACA | 58.443 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
115 | 123 | 1.760613 | ACAACGGAGGAGACAGTTCAA | 59.239 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
143 | 151 | 2.211250 | AGTTCCGCACTCTAGTGGTA | 57.789 | 50.000 | 11.86 | 0.00 | 45.72 | 3.25 |
146 | 154 | 2.426024 | GTTCCGCACTCTAGTGGTATGA | 59.574 | 50.000 | 11.86 | 0.00 | 45.72 | 2.15 |
183 | 191 | 6.499350 | ACTTGGTGTAGAGTTAATAGGGTTGA | 59.501 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
189 | 199 | 4.833390 | AGAGTTAATAGGGTTGAGTGTGC | 58.167 | 43.478 | 0.00 | 0.00 | 0.00 | 4.57 |
206 | 216 | 1.602605 | GCTGTGGTTTTAGCCCCGT | 60.603 | 57.895 | 0.00 | 0.00 | 33.89 | 5.28 |
207 | 217 | 0.321830 | GCTGTGGTTTTAGCCCCGTA | 60.322 | 55.000 | 0.00 | 0.00 | 33.89 | 4.02 |
208 | 218 | 1.734163 | CTGTGGTTTTAGCCCCGTAG | 58.266 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
209 | 219 | 1.276989 | CTGTGGTTTTAGCCCCGTAGA | 59.723 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
210 | 220 | 1.698532 | TGTGGTTTTAGCCCCGTAGAA | 59.301 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
211 | 221 | 2.289819 | TGTGGTTTTAGCCCCGTAGAAG | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
212 | 222 | 2.027837 | GTGGTTTTAGCCCCGTAGAAGA | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
213 | 223 | 2.841881 | TGGTTTTAGCCCCGTAGAAGAT | 59.158 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
214 | 224 | 3.264964 | TGGTTTTAGCCCCGTAGAAGATT | 59.735 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
215 | 225 | 4.263594 | TGGTTTTAGCCCCGTAGAAGATTT | 60.264 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
216 | 226 | 4.334759 | GGTTTTAGCCCCGTAGAAGATTTC | 59.665 | 45.833 | 0.00 | 0.00 | 0.00 | 2.17 |
217 | 227 | 3.832615 | TTAGCCCCGTAGAAGATTTCC | 57.167 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
218 | 228 | 1.580059 | AGCCCCGTAGAAGATTTCCA | 58.420 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
219 | 229 | 2.127708 | AGCCCCGTAGAAGATTTCCAT | 58.872 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
220 | 230 | 2.158755 | AGCCCCGTAGAAGATTTCCATG | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.66 |
221 | 231 | 2.222027 | CCCCGTAGAAGATTTCCATGC | 58.778 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
222 | 232 | 2.158755 | CCCCGTAGAAGATTTCCATGCT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
223 | 233 | 2.874701 | CCCGTAGAAGATTTCCATGCTG | 59.125 | 50.000 | 0.00 | 0.00 | 0.00 | 4.41 |
224 | 234 | 3.535561 | CCGTAGAAGATTTCCATGCTGT | 58.464 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
225 | 235 | 3.941483 | CCGTAGAAGATTTCCATGCTGTT | 59.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
226 | 236 | 4.396166 | CCGTAGAAGATTTCCATGCTGTTT | 59.604 | 41.667 | 0.00 | 0.00 | 0.00 | 2.83 |
227 | 237 | 5.106157 | CCGTAGAAGATTTCCATGCTGTTTT | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
228 | 238 | 6.024049 | CGTAGAAGATTTCCATGCTGTTTTC | 58.976 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
229 | 239 | 6.348458 | CGTAGAAGATTTCCATGCTGTTTTCA | 60.348 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
230 | 240 | 6.409524 | AGAAGATTTCCATGCTGTTTTCAA | 57.590 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
231 | 241 | 7.001099 | AGAAGATTTCCATGCTGTTTTCAAT | 57.999 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
232 | 242 | 7.447594 | AGAAGATTTCCATGCTGTTTTCAATT | 58.552 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
233 | 243 | 7.601508 | AGAAGATTTCCATGCTGTTTTCAATTC | 59.398 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
234 | 244 | 7.001099 | AGATTTCCATGCTGTTTTCAATTCT | 57.999 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
235 | 245 | 8.125978 | AGATTTCCATGCTGTTTTCAATTCTA | 57.874 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
236 | 246 | 8.755977 | AGATTTCCATGCTGTTTTCAATTCTAT | 58.244 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
237 | 247 | 9.374838 | GATTTCCATGCTGTTTTCAATTCTATT | 57.625 | 29.630 | 0.00 | 0.00 | 0.00 | 1.73 |
241 | 251 | 9.859427 | TCCATGCTGTTTTCAATTCTATTAAAG | 57.141 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
242 | 252 | 8.598075 | CCATGCTGTTTTCAATTCTATTAAAGC | 58.402 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
243 | 253 | 7.795431 | TGCTGTTTTCAATTCTATTAAAGCG | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 4.68 |
244 | 254 | 7.367285 | TGCTGTTTTCAATTCTATTAAAGCGT | 58.633 | 30.769 | 0.00 | 0.00 | 0.00 | 5.07 |
245 | 255 | 7.537306 | TGCTGTTTTCAATTCTATTAAAGCGTC | 59.463 | 33.333 | 0.00 | 0.00 | 0.00 | 5.19 |
246 | 256 | 7.008357 | GCTGTTTTCAATTCTATTAAAGCGTCC | 59.992 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
247 | 257 | 7.309920 | TGTTTTCAATTCTATTAAAGCGTCCC | 58.690 | 34.615 | 0.00 | 0.00 | 0.00 | 4.46 |
248 | 258 | 6.445357 | TTTCAATTCTATTAAAGCGTCCCC | 57.555 | 37.500 | 0.00 | 0.00 | 0.00 | 4.81 |
249 | 259 | 5.105567 | TCAATTCTATTAAAGCGTCCCCA | 57.894 | 39.130 | 0.00 | 0.00 | 0.00 | 4.96 |
250 | 260 | 5.502079 | TCAATTCTATTAAAGCGTCCCCAA | 58.498 | 37.500 | 0.00 | 0.00 | 0.00 | 4.12 |
251 | 261 | 5.588648 | TCAATTCTATTAAAGCGTCCCCAAG | 59.411 | 40.000 | 0.00 | 0.00 | 0.00 | 3.61 |
252 | 262 | 4.563140 | TTCTATTAAAGCGTCCCCAAGT | 57.437 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
253 | 263 | 4.563140 | TCTATTAAAGCGTCCCCAAGTT | 57.437 | 40.909 | 0.00 | 0.00 | 0.00 | 2.66 |
254 | 264 | 4.258543 | TCTATTAAAGCGTCCCCAAGTTG | 58.741 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
255 | 265 | 2.351706 | TTAAAGCGTCCCCAAGTTGT | 57.648 | 45.000 | 1.45 | 0.00 | 0.00 | 3.32 |
256 | 266 | 3.488778 | TTAAAGCGTCCCCAAGTTGTA | 57.511 | 42.857 | 1.45 | 0.00 | 0.00 | 2.41 |
257 | 267 | 2.579410 | AAAGCGTCCCCAAGTTGTAT | 57.421 | 45.000 | 1.45 | 0.00 | 0.00 | 2.29 |
258 | 268 | 2.109425 | AAGCGTCCCCAAGTTGTATC | 57.891 | 50.000 | 1.45 | 0.00 | 0.00 | 2.24 |
259 | 269 | 0.981183 | AGCGTCCCCAAGTTGTATCA | 59.019 | 50.000 | 1.45 | 0.00 | 0.00 | 2.15 |
260 | 270 | 1.349688 | AGCGTCCCCAAGTTGTATCAA | 59.650 | 47.619 | 1.45 | 0.00 | 0.00 | 2.57 |
261 | 271 | 2.156098 | GCGTCCCCAAGTTGTATCAAA | 58.844 | 47.619 | 1.45 | 0.00 | 0.00 | 2.69 |
262 | 272 | 2.095415 | GCGTCCCCAAGTTGTATCAAAC | 60.095 | 50.000 | 1.45 | 0.00 | 0.00 | 2.93 |
263 | 273 | 3.142951 | CGTCCCCAAGTTGTATCAAACA | 58.857 | 45.455 | 1.45 | 0.00 | 35.88 | 2.83 |
264 | 274 | 3.756434 | CGTCCCCAAGTTGTATCAAACAT | 59.244 | 43.478 | 1.45 | 0.00 | 38.10 | 2.71 |
265 | 275 | 4.217550 | CGTCCCCAAGTTGTATCAAACATT | 59.782 | 41.667 | 1.45 | 0.00 | 38.10 | 2.71 |
266 | 276 | 5.278758 | CGTCCCCAAGTTGTATCAAACATTT | 60.279 | 40.000 | 1.45 | 0.00 | 38.10 | 2.32 |
267 | 277 | 6.521162 | GTCCCCAAGTTGTATCAAACATTTT | 58.479 | 36.000 | 1.45 | 0.00 | 38.10 | 1.82 |
268 | 278 | 6.989759 | GTCCCCAAGTTGTATCAAACATTTTT | 59.010 | 34.615 | 1.45 | 0.00 | 38.10 | 1.94 |
305 | 315 | 8.931385 | ACTTTATATGTACGGTAAATTGTCGT | 57.069 | 30.769 | 0.00 | 6.31 | 40.40 | 4.34 |
315 | 325 | 7.281991 | ACGGTAAATTGTCGTACATCTTTAC | 57.718 | 36.000 | 15.61 | 15.61 | 36.68 | 2.01 |
316 | 326 | 7.092716 | ACGGTAAATTGTCGTACATCTTTACT | 58.907 | 34.615 | 18.97 | 9.06 | 37.09 | 2.24 |
317 | 327 | 8.243426 | ACGGTAAATTGTCGTACATCTTTACTA | 58.757 | 33.333 | 18.97 | 0.00 | 37.09 | 1.82 |
318 | 328 | 8.526681 | CGGTAAATTGTCGTACATCTTTACTAC | 58.473 | 37.037 | 18.97 | 11.30 | 37.09 | 2.73 |
319 | 329 | 8.811378 | GGTAAATTGTCGTACATCTTTACTACC | 58.189 | 37.037 | 18.97 | 11.14 | 37.09 | 3.18 |
320 | 330 | 9.357652 | GTAAATTGTCGTACATCTTTACTACCA | 57.642 | 33.333 | 16.08 | 0.00 | 35.70 | 3.25 |
322 | 332 | 9.444600 | AAATTGTCGTACATCTTTACTACCATT | 57.555 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
324 | 334 | 8.915871 | TTGTCGTACATCTTTACTACCATTAC | 57.084 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
325 | 335 | 7.483307 | TGTCGTACATCTTTACTACCATTACC | 58.517 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
326 | 336 | 6.920210 | GTCGTACATCTTTACTACCATTACCC | 59.080 | 42.308 | 0.00 | 0.00 | 0.00 | 3.69 |
327 | 337 | 5.916883 | CGTACATCTTTACTACCATTACCCG | 59.083 | 44.000 | 0.00 | 0.00 | 0.00 | 5.28 |
328 | 338 | 4.700700 | ACATCTTTACTACCATTACCCGC | 58.299 | 43.478 | 0.00 | 0.00 | 0.00 | 6.13 |
329 | 339 | 4.162698 | ACATCTTTACTACCATTACCCGCA | 59.837 | 41.667 | 0.00 | 0.00 | 0.00 | 5.69 |
330 | 340 | 5.163237 | ACATCTTTACTACCATTACCCGCAT | 60.163 | 40.000 | 0.00 | 0.00 | 0.00 | 4.73 |
331 | 341 | 5.362105 | TCTTTACTACCATTACCCGCATT | 57.638 | 39.130 | 0.00 | 0.00 | 0.00 | 3.56 |
332 | 342 | 5.120399 | TCTTTACTACCATTACCCGCATTG | 58.880 | 41.667 | 0.00 | 0.00 | 0.00 | 2.82 |
333 | 343 | 1.675552 | ACTACCATTACCCGCATTGC | 58.324 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
334 | 344 | 1.065053 | ACTACCATTACCCGCATTGCA | 60.065 | 47.619 | 9.69 | 0.00 | 0.00 | 4.08 |
335 | 345 | 2.229792 | CTACCATTACCCGCATTGCAT | 58.770 | 47.619 | 9.69 | 0.00 | 0.00 | 3.96 |
336 | 346 | 2.356665 | ACCATTACCCGCATTGCATA | 57.643 | 45.000 | 9.69 | 0.00 | 0.00 | 3.14 |
337 | 347 | 2.875296 | ACCATTACCCGCATTGCATAT | 58.125 | 42.857 | 9.69 | 0.00 | 0.00 | 1.78 |
338 | 348 | 2.819608 | ACCATTACCCGCATTGCATATC | 59.180 | 45.455 | 9.69 | 0.00 | 0.00 | 1.63 |
339 | 349 | 3.084039 | CCATTACCCGCATTGCATATCT | 58.916 | 45.455 | 9.69 | 0.00 | 0.00 | 1.98 |
340 | 350 | 4.260985 | CCATTACCCGCATTGCATATCTA | 58.739 | 43.478 | 9.69 | 0.00 | 0.00 | 1.98 |
341 | 351 | 4.094887 | CCATTACCCGCATTGCATATCTAC | 59.905 | 45.833 | 9.69 | 0.00 | 0.00 | 2.59 |
342 | 352 | 2.928801 | ACCCGCATTGCATATCTACA | 57.071 | 45.000 | 9.69 | 0.00 | 0.00 | 2.74 |
343 | 353 | 3.423539 | ACCCGCATTGCATATCTACAT | 57.576 | 42.857 | 9.69 | 0.00 | 0.00 | 2.29 |
344 | 354 | 4.551702 | ACCCGCATTGCATATCTACATA | 57.448 | 40.909 | 9.69 | 0.00 | 0.00 | 2.29 |
345 | 355 | 5.102953 | ACCCGCATTGCATATCTACATAT | 57.897 | 39.130 | 9.69 | 0.00 | 0.00 | 1.78 |
346 | 356 | 6.233905 | ACCCGCATTGCATATCTACATATA | 57.766 | 37.500 | 9.69 | 0.00 | 0.00 | 0.86 |
347 | 357 | 6.830912 | ACCCGCATTGCATATCTACATATAT | 58.169 | 36.000 | 9.69 | 0.00 | 0.00 | 0.86 |
348 | 358 | 7.282585 | ACCCGCATTGCATATCTACATATATT | 58.717 | 34.615 | 9.69 | 0.00 | 0.00 | 1.28 |
349 | 359 | 7.775093 | ACCCGCATTGCATATCTACATATATTT | 59.225 | 33.333 | 9.69 | 0.00 | 0.00 | 1.40 |
350 | 360 | 8.623903 | CCCGCATTGCATATCTACATATATTTT | 58.376 | 33.333 | 9.69 | 0.00 | 0.00 | 1.82 |
372 | 382 | 8.845413 | TTTTTAATTATGCAGTCCATTGCTTT | 57.155 | 26.923 | 0.00 | 0.00 | 44.38 | 3.51 |
373 | 383 | 8.477984 | TTTTAATTATGCAGTCCATTGCTTTC | 57.522 | 30.769 | 0.00 | 0.00 | 44.38 | 2.62 |
374 | 384 | 5.927281 | AATTATGCAGTCCATTGCTTTCT | 57.073 | 34.783 | 0.00 | 0.00 | 44.38 | 2.52 |
375 | 385 | 8.518430 | TTAATTATGCAGTCCATTGCTTTCTA | 57.482 | 30.769 | 0.00 | 0.00 | 44.38 | 2.10 |
376 | 386 | 5.818136 | TTATGCAGTCCATTGCTTTCTAC | 57.182 | 39.130 | 0.00 | 0.00 | 44.38 | 2.59 |
377 | 387 | 3.138884 | TGCAGTCCATTGCTTTCTACA | 57.861 | 42.857 | 0.00 | 0.00 | 44.38 | 2.74 |
378 | 388 | 2.813754 | TGCAGTCCATTGCTTTCTACAC | 59.186 | 45.455 | 0.00 | 0.00 | 44.38 | 2.90 |
379 | 389 | 2.813754 | GCAGTCCATTGCTTTCTACACA | 59.186 | 45.455 | 0.00 | 0.00 | 40.89 | 3.72 |
380 | 390 | 3.120060 | GCAGTCCATTGCTTTCTACACAG | 60.120 | 47.826 | 0.00 | 0.00 | 40.89 | 3.66 |
381 | 391 | 4.318332 | CAGTCCATTGCTTTCTACACAGA | 58.682 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
382 | 392 | 4.756642 | CAGTCCATTGCTTTCTACACAGAA | 59.243 | 41.667 | 0.00 | 0.00 | 39.06 | 3.02 |
383 | 393 | 5.239306 | CAGTCCATTGCTTTCTACACAGAAA | 59.761 | 40.000 | 0.35 | 0.35 | 46.24 | 2.52 |
384 | 394 | 6.006449 | AGTCCATTGCTTTCTACACAGAAAT | 58.994 | 36.000 | 0.61 | 0.00 | 46.95 | 2.17 |
385 | 395 | 7.119699 | CAGTCCATTGCTTTCTACACAGAAATA | 59.880 | 37.037 | 0.61 | 0.00 | 46.95 | 1.40 |
386 | 396 | 7.665559 | AGTCCATTGCTTTCTACACAGAAATAA | 59.334 | 33.333 | 0.61 | 1.32 | 46.95 | 1.40 |
387 | 397 | 7.965107 | GTCCATTGCTTTCTACACAGAAATAAG | 59.035 | 37.037 | 0.61 | 0.00 | 46.95 | 1.73 |
388 | 398 | 7.665559 | TCCATTGCTTTCTACACAGAAATAAGT | 59.334 | 33.333 | 0.61 | 0.00 | 46.95 | 2.24 |
389 | 399 | 7.965107 | CCATTGCTTTCTACACAGAAATAAGTC | 59.035 | 37.037 | 0.61 | 0.00 | 46.95 | 3.01 |
390 | 400 | 8.725148 | CATTGCTTTCTACACAGAAATAAGTCT | 58.275 | 33.333 | 0.61 | 0.00 | 46.95 | 3.24 |
391 | 401 | 9.944376 | ATTGCTTTCTACACAGAAATAAGTCTA | 57.056 | 29.630 | 0.61 | 0.00 | 46.95 | 2.59 |
392 | 402 | 9.944376 | TTGCTTTCTACACAGAAATAAGTCTAT | 57.056 | 29.630 | 0.61 | 0.00 | 46.95 | 1.98 |
393 | 403 | 9.371136 | TGCTTTCTACACAGAAATAAGTCTATG | 57.629 | 33.333 | 0.61 | 0.00 | 46.95 | 2.23 |
394 | 404 | 9.587772 | GCTTTCTACACAGAAATAAGTCTATGA | 57.412 | 33.333 | 0.61 | 0.00 | 46.95 | 2.15 |
398 | 408 | 9.462606 | TCTACACAGAAATAAGTCTATGAGTGA | 57.537 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
399 | 409 | 9.509855 | CTACACAGAAATAAGTCTATGAGTGAC | 57.490 | 37.037 | 0.00 | 0.00 | 34.88 | 3.67 |
400 | 410 | 7.896811 | ACACAGAAATAAGTCTATGAGTGACA | 58.103 | 34.615 | 0.00 | 0.00 | 36.94 | 3.58 |
401 | 411 | 8.367911 | ACACAGAAATAAGTCTATGAGTGACAA | 58.632 | 33.333 | 0.00 | 0.00 | 36.94 | 3.18 |
402 | 412 | 9.208022 | CACAGAAATAAGTCTATGAGTGACAAA | 57.792 | 33.333 | 0.00 | 0.00 | 36.94 | 2.83 |
403 | 413 | 9.778741 | ACAGAAATAAGTCTATGAGTGACAAAA | 57.221 | 29.630 | 0.00 | 0.00 | 36.94 | 2.44 |
411 | 421 | 8.994429 | AGTCTATGAGTGACAAAATCTTGTAG | 57.006 | 34.615 | 0.00 | 0.00 | 45.98 | 2.74 |
412 | 422 | 8.589338 | AGTCTATGAGTGACAAAATCTTGTAGT | 58.411 | 33.333 | 0.00 | 0.00 | 45.98 | 2.73 |
413 | 423 | 8.865001 | GTCTATGAGTGACAAAATCTTGTAGTC | 58.135 | 37.037 | 0.00 | 0.00 | 45.98 | 2.59 |
414 | 424 | 8.035394 | TCTATGAGTGACAAAATCTTGTAGTCC | 58.965 | 37.037 | 0.00 | 0.00 | 45.98 | 3.85 |
415 | 425 | 6.174720 | TGAGTGACAAAATCTTGTAGTCCT | 57.825 | 37.500 | 0.00 | 0.00 | 45.98 | 3.85 |
416 | 426 | 6.591935 | TGAGTGACAAAATCTTGTAGTCCTT | 58.408 | 36.000 | 0.00 | 0.00 | 45.98 | 3.36 |
417 | 427 | 7.054124 | TGAGTGACAAAATCTTGTAGTCCTTT | 58.946 | 34.615 | 0.00 | 0.00 | 45.98 | 3.11 |
418 | 428 | 7.012327 | TGAGTGACAAAATCTTGTAGTCCTTTG | 59.988 | 37.037 | 0.00 | 0.00 | 45.98 | 2.77 |
419 | 429 | 7.054124 | AGTGACAAAATCTTGTAGTCCTTTGA | 58.946 | 34.615 | 0.00 | 0.00 | 45.98 | 2.69 |
420 | 430 | 7.721399 | AGTGACAAAATCTTGTAGTCCTTTGAT | 59.279 | 33.333 | 0.00 | 0.00 | 45.98 | 2.57 |
421 | 431 | 8.352942 | GTGACAAAATCTTGTAGTCCTTTGATT | 58.647 | 33.333 | 0.00 | 0.00 | 45.98 | 2.57 |
422 | 432 | 8.912988 | TGACAAAATCTTGTAGTCCTTTGATTT | 58.087 | 29.630 | 0.00 | 0.00 | 45.98 | 2.17 |
423 | 433 | 9.399403 | GACAAAATCTTGTAGTCCTTTGATTTC | 57.601 | 33.333 | 0.00 | 0.00 | 45.98 | 2.17 |
424 | 434 | 8.912988 | ACAAAATCTTGTAGTCCTTTGATTTCA | 58.087 | 29.630 | 0.00 | 0.00 | 44.14 | 2.69 |
425 | 435 | 9.918630 | CAAAATCTTGTAGTCCTTTGATTTCAT | 57.081 | 29.630 | 0.00 | 0.00 | 34.39 | 2.57 |
427 | 437 | 9.918630 | AAATCTTGTAGTCCTTTGATTTCATTG | 57.081 | 29.630 | 0.00 | 0.00 | 31.16 | 2.82 |
428 | 438 | 8.641498 | ATCTTGTAGTCCTTTGATTTCATTGT | 57.359 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
429 | 439 | 8.463930 | TCTTGTAGTCCTTTGATTTCATTGTT | 57.536 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
430 | 440 | 8.912988 | TCTTGTAGTCCTTTGATTTCATTGTTT | 58.087 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
432 | 442 | 9.959749 | TTGTAGTCCTTTGATTTCATTGTTTAC | 57.040 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
433 | 443 | 9.126151 | TGTAGTCCTTTGATTTCATTGTTTACA | 57.874 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
434 | 444 | 9.959749 | GTAGTCCTTTGATTTCATTGTTTACAA | 57.040 | 29.630 | 0.00 | 0.00 | 40.51 | 2.41 |
436 | 446 | 8.695456 | AGTCCTTTGATTTCATTGTTTACAAGT | 58.305 | 29.630 | 1.50 | 0.00 | 39.47 | 3.16 |
437 | 447 | 8.755018 | GTCCTTTGATTTCATTGTTTACAAGTG | 58.245 | 33.333 | 1.50 | 1.34 | 39.47 | 3.16 |
438 | 448 | 8.690884 | TCCTTTGATTTCATTGTTTACAAGTGA | 58.309 | 29.630 | 1.50 | 3.39 | 39.47 | 3.41 |
439 | 449 | 9.480053 | CCTTTGATTTCATTGTTTACAAGTGAT | 57.520 | 29.630 | 1.50 | 0.00 | 39.47 | 3.06 |
441 | 451 | 7.872163 | TGATTTCATTGTTTACAAGTGATGC | 57.128 | 32.000 | 1.50 | 0.00 | 39.47 | 3.91 |
442 | 452 | 7.432059 | TGATTTCATTGTTTACAAGTGATGCA | 58.568 | 30.769 | 1.50 | 0.00 | 39.47 | 3.96 |
443 | 453 | 7.595875 | TGATTTCATTGTTTACAAGTGATGCAG | 59.404 | 33.333 | 0.00 | 0.00 | 39.47 | 4.41 |
444 | 454 | 5.375417 | TCATTGTTTACAAGTGATGCAGG | 57.625 | 39.130 | 0.00 | 0.00 | 39.47 | 4.85 |
445 | 455 | 4.218200 | TCATTGTTTACAAGTGATGCAGGG | 59.782 | 41.667 | 0.00 | 0.00 | 39.47 | 4.45 |
446 | 456 | 2.513753 | TGTTTACAAGTGATGCAGGGG | 58.486 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
447 | 457 | 2.158534 | TGTTTACAAGTGATGCAGGGGT | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 4.95 |
448 | 458 | 2.890945 | GTTTACAAGTGATGCAGGGGTT | 59.109 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
449 | 459 | 2.198827 | TACAAGTGATGCAGGGGTTG | 57.801 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
458 | 468 | 3.860681 | CAGGGGTTGCTTTGCACT | 58.139 | 55.556 | 0.00 | 0.00 | 38.71 | 4.40 |
459 | 469 | 2.126951 | CAGGGGTTGCTTTGCACTT | 58.873 | 52.632 | 0.00 | 0.00 | 38.71 | 3.16 |
460 | 470 | 0.465287 | CAGGGGTTGCTTTGCACTTT | 59.535 | 50.000 | 0.00 | 0.00 | 38.71 | 2.66 |
461 | 471 | 1.134431 | CAGGGGTTGCTTTGCACTTTT | 60.134 | 47.619 | 0.00 | 0.00 | 38.71 | 2.27 |
462 | 472 | 1.138859 | AGGGGTTGCTTTGCACTTTTC | 59.861 | 47.619 | 0.00 | 0.00 | 38.71 | 2.29 |
463 | 473 | 1.138859 | GGGGTTGCTTTGCACTTTTCT | 59.861 | 47.619 | 0.00 | 0.00 | 38.71 | 2.52 |
464 | 474 | 2.419990 | GGGGTTGCTTTGCACTTTTCTT | 60.420 | 45.455 | 0.00 | 0.00 | 38.71 | 2.52 |
465 | 475 | 3.181470 | GGGGTTGCTTTGCACTTTTCTTA | 60.181 | 43.478 | 0.00 | 0.00 | 38.71 | 2.10 |
466 | 476 | 4.503123 | GGGGTTGCTTTGCACTTTTCTTAT | 60.503 | 41.667 | 0.00 | 0.00 | 38.71 | 1.73 |
467 | 477 | 5.056480 | GGGTTGCTTTGCACTTTTCTTATT | 58.944 | 37.500 | 0.00 | 0.00 | 38.71 | 1.40 |
468 | 478 | 5.527214 | GGGTTGCTTTGCACTTTTCTTATTT | 59.473 | 36.000 | 0.00 | 0.00 | 38.71 | 1.40 |
469 | 479 | 6.292865 | GGGTTGCTTTGCACTTTTCTTATTTC | 60.293 | 38.462 | 0.00 | 0.00 | 38.71 | 2.17 |
470 | 480 | 6.257630 | GGTTGCTTTGCACTTTTCTTATTTCA | 59.742 | 34.615 | 0.00 | 0.00 | 38.71 | 2.69 |
471 | 481 | 7.041848 | GGTTGCTTTGCACTTTTCTTATTTCAT | 60.042 | 33.333 | 0.00 | 0.00 | 38.71 | 2.57 |
472 | 482 | 7.410800 | TGCTTTGCACTTTTCTTATTTCATG | 57.589 | 32.000 | 0.00 | 0.00 | 31.71 | 3.07 |
473 | 483 | 6.424509 | TGCTTTGCACTTTTCTTATTTCATGG | 59.575 | 34.615 | 0.00 | 0.00 | 31.71 | 3.66 |
474 | 484 | 6.646240 | GCTTTGCACTTTTCTTATTTCATGGA | 59.354 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
475 | 485 | 7.332678 | GCTTTGCACTTTTCTTATTTCATGGAT | 59.667 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
476 | 486 | 8.537049 | TTTGCACTTTTCTTATTTCATGGATG | 57.463 | 30.769 | 0.00 | 0.00 | 0.00 | 3.51 |
477 | 487 | 6.101332 | TGCACTTTTCTTATTTCATGGATGC | 58.899 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
478 | 488 | 6.071221 | TGCACTTTTCTTATTTCATGGATGCT | 60.071 | 34.615 | 0.00 | 0.00 | 0.00 | 3.79 |
479 | 489 | 7.122501 | TGCACTTTTCTTATTTCATGGATGCTA | 59.877 | 33.333 | 0.00 | 0.00 | 0.00 | 3.49 |
480 | 490 | 7.433425 | GCACTTTTCTTATTTCATGGATGCTAC | 59.567 | 37.037 | 0.00 | 0.00 | 0.00 | 3.58 |
481 | 491 | 7.917505 | CACTTTTCTTATTTCATGGATGCTACC | 59.082 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
482 | 492 | 7.836183 | ACTTTTCTTATTTCATGGATGCTACCT | 59.164 | 33.333 | 0.00 | 0.00 | 0.00 | 3.08 |
483 | 493 | 7.807977 | TTTCTTATTTCATGGATGCTACCTC | 57.192 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
484 | 494 | 6.753913 | TCTTATTTCATGGATGCTACCTCT | 57.246 | 37.500 | 0.00 | 0.00 | 0.00 | 3.69 |
485 | 495 | 7.855784 | TCTTATTTCATGGATGCTACCTCTA | 57.144 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
486 | 496 | 7.671302 | TCTTATTTCATGGATGCTACCTCTAC | 58.329 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
487 | 497 | 7.510685 | TCTTATTTCATGGATGCTACCTCTACT | 59.489 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
488 | 498 | 5.957771 | TTTCATGGATGCTACCTCTACTT | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
489 | 499 | 5.957771 | TTCATGGATGCTACCTCTACTTT | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
490 | 500 | 5.537300 | TCATGGATGCTACCTCTACTTTC | 57.463 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
491 | 501 | 4.038042 | TCATGGATGCTACCTCTACTTTCG | 59.962 | 45.833 | 0.00 | 0.00 | 0.00 | 3.46 |
492 | 502 | 3.628008 | TGGATGCTACCTCTACTTTCGA | 58.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
493 | 503 | 4.021229 | TGGATGCTACCTCTACTTTCGAA | 58.979 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
494 | 504 | 4.464951 | TGGATGCTACCTCTACTTTCGAAA | 59.535 | 41.667 | 10.71 | 10.71 | 0.00 | 3.46 |
495 | 505 | 5.044558 | GGATGCTACCTCTACTTTCGAAAG | 58.955 | 45.833 | 31.29 | 31.29 | 41.73 | 2.62 |
496 | 506 | 5.163540 | GGATGCTACCTCTACTTTCGAAAGA | 60.164 | 44.000 | 37.54 | 22.27 | 39.31 | 2.52 |
528 | 538 | 8.866970 | TTTTCTATACCTATTTCCGTTTGGTT | 57.133 | 30.769 | 0.00 | 0.00 | 36.30 | 3.67 |
529 | 539 | 8.866970 | TTTCTATACCTATTTCCGTTTGGTTT | 57.133 | 30.769 | 0.00 | 0.00 | 36.30 | 3.27 |
530 | 540 | 9.956640 | TTTCTATACCTATTTCCGTTTGGTTTA | 57.043 | 29.630 | 0.00 | 0.00 | 36.30 | 2.01 |
531 | 541 | 9.956640 | TTCTATACCTATTTCCGTTTGGTTTAA | 57.043 | 29.630 | 0.00 | 0.00 | 36.30 | 1.52 |
535 | 545 | 7.075674 | ACCTATTTCCGTTTGGTTTAATACG | 57.924 | 36.000 | 0.00 | 0.00 | 36.30 | 3.06 |
540 | 550 | 3.812656 | CCGTTTGGTTTAATACGGTGTG | 58.187 | 45.455 | 0.00 | 0.00 | 46.25 | 3.82 |
541 | 551 | 3.227948 | CGTTTGGTTTAATACGGTGTGC | 58.772 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
542 | 552 | 3.058777 | CGTTTGGTTTAATACGGTGTGCT | 60.059 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
543 | 553 | 4.555116 | CGTTTGGTTTAATACGGTGTGCTT | 60.555 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
544 | 554 | 4.752661 | TTGGTTTAATACGGTGTGCTTC | 57.247 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
545 | 555 | 3.741249 | TGGTTTAATACGGTGTGCTTCA | 58.259 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
546 | 556 | 4.135306 | TGGTTTAATACGGTGTGCTTCAA | 58.865 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
547 | 557 | 4.579340 | TGGTTTAATACGGTGTGCTTCAAA | 59.421 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
548 | 558 | 5.067413 | TGGTTTAATACGGTGTGCTTCAAAA | 59.933 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
549 | 559 | 5.978322 | GGTTTAATACGGTGTGCTTCAAAAA | 59.022 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
575 | 585 | 9.740710 | AATGAAGTTTCTAAGTGGCTTTATACT | 57.259 | 29.630 | 0.00 | 0.00 | 0.00 | 2.12 |
576 | 586 | 9.740710 | ATGAAGTTTCTAAGTGGCTTTATACTT | 57.259 | 29.630 | 0.00 | 0.00 | 40.09 | 2.24 |
577 | 587 | 9.569122 | TGAAGTTTCTAAGTGGCTTTATACTTT | 57.431 | 29.630 | 0.00 | 0.00 | 38.11 | 2.66 |
578 | 588 | 9.827411 | GAAGTTTCTAAGTGGCTTTATACTTTG | 57.173 | 33.333 | 0.00 | 0.00 | 38.11 | 2.77 |
579 | 589 | 8.336801 | AGTTTCTAAGTGGCTTTATACTTTGG | 57.663 | 34.615 | 0.00 | 0.00 | 38.11 | 3.28 |
580 | 590 | 7.393515 | AGTTTCTAAGTGGCTTTATACTTTGGG | 59.606 | 37.037 | 0.00 | 0.00 | 38.11 | 4.12 |
581 | 591 | 6.382919 | TCTAAGTGGCTTTATACTTTGGGT | 57.617 | 37.500 | 0.00 | 0.00 | 38.11 | 4.51 |
582 | 592 | 6.412214 | TCTAAGTGGCTTTATACTTTGGGTC | 58.588 | 40.000 | 0.00 | 0.00 | 38.11 | 4.46 |
583 | 593 | 4.650972 | AGTGGCTTTATACTTTGGGTCA | 57.349 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
584 | 594 | 4.589908 | AGTGGCTTTATACTTTGGGTCAG | 58.410 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
585 | 595 | 4.042934 | AGTGGCTTTATACTTTGGGTCAGT | 59.957 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
586 | 596 | 5.249852 | AGTGGCTTTATACTTTGGGTCAGTA | 59.750 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
587 | 597 | 6.069615 | AGTGGCTTTATACTTTGGGTCAGTAT | 60.070 | 38.462 | 0.00 | 0.00 | 40.07 | 2.12 |
588 | 598 | 7.126726 | AGTGGCTTTATACTTTGGGTCAGTATA | 59.873 | 37.037 | 0.00 | 0.00 | 38.26 | 1.47 |
635 | 645 | 1.988293 | TTGCGACCCATTTTTCTGGA | 58.012 | 45.000 | 0.00 | 0.00 | 38.69 | 3.86 |
674 | 684 | 6.930731 | TGGTAACATTCTTAAATTCCCAAGC | 58.069 | 36.000 | 0.00 | 0.00 | 46.17 | 4.01 |
675 | 685 | 6.033966 | GGTAACATTCTTAAATTCCCAAGCG | 58.966 | 40.000 | 0.00 | 0.00 | 0.00 | 4.68 |
693 | 705 | 0.306533 | CGGTGTTGTTTTCCCTGACG | 59.693 | 55.000 | 0.00 | 0.00 | 0.00 | 4.35 |
731 | 743 | 2.158813 | TCTTGGTTTCTTCCGAAGCAGT | 60.159 | 45.455 | 3.00 | 0.00 | 32.64 | 4.40 |
751 | 763 | 5.336451 | GCAGTAAACTTGGTTAATGAAGGGG | 60.336 | 44.000 | 9.62 | 0.00 | 32.18 | 4.79 |
761 | 773 | 0.693049 | AATGAAGGGGCTTGACGACT | 59.307 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
774 | 786 | 5.452077 | GGCTTGACGACTGAGGTCTAAATAT | 60.452 | 44.000 | 0.00 | 0.00 | 40.10 | 1.28 |
832 | 875 | 7.575414 | TGGCAAGTGAGTATTTTGTTAAGAA | 57.425 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
833 | 876 | 7.648142 | TGGCAAGTGAGTATTTTGTTAAGAAG | 58.352 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
834 | 877 | 7.284489 | TGGCAAGTGAGTATTTTGTTAAGAAGT | 59.716 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
835 | 878 | 7.591426 | GGCAAGTGAGTATTTTGTTAAGAAGTG | 59.409 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
836 | 879 | 8.342634 | GCAAGTGAGTATTTTGTTAAGAAGTGA | 58.657 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
837 | 880 | 9.869844 | CAAGTGAGTATTTTGTTAAGAAGTGAG | 57.130 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
838 | 881 | 9.614792 | AAGTGAGTATTTTGTTAAGAAGTGAGT | 57.385 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
909 | 952 | 0.326264 | ATGACCAGTTGACCTCTGCC | 59.674 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
927 | 970 | 4.216257 | TCTGCCAGTTAGCATTTTGAGAAC | 59.784 | 41.667 | 0.00 | 0.00 | 43.09 | 3.01 |
937 | 980 | 4.397417 | AGCATTTTGAGAACACTATCCTGC | 59.603 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
938 | 981 | 4.439289 | GCATTTTGAGAACACTATCCTGCC | 60.439 | 45.833 | 0.00 | 0.00 | 0.00 | 4.85 |
948 | 991 | 3.126831 | CACTATCCTGCCGATCAAGTTC | 58.873 | 50.000 | 0.00 | 0.00 | 31.92 | 3.01 |
959 | 1002 | 4.025313 | GCCGATCAAGTTCTTCTCTTATGC | 60.025 | 45.833 | 0.00 | 0.00 | 0.00 | 3.14 |
1001 | 1044 | 1.352352 | GAGCCTGGCCACCATATACAT | 59.648 | 52.381 | 16.57 | 0.00 | 30.82 | 2.29 |
1023 | 1066 | 2.149578 | CCTGAAGGTGCAGAAAGTGAG | 58.850 | 52.381 | 0.00 | 0.00 | 38.14 | 3.51 |
1032 | 1075 | 2.965831 | TGCAGAAAGTGAGACTACCACT | 59.034 | 45.455 | 0.00 | 0.00 | 45.88 | 4.00 |
1062 | 1105 | 6.608405 | TCCTTATGGATTCACTGAATTTGCAT | 59.392 | 34.615 | 5.73 | 5.39 | 37.46 | 3.96 |
1075 | 1118 | 6.071221 | ACTGAATTTGCATGATCCAAAAGCTA | 60.071 | 34.615 | 0.00 | 0.00 | 35.97 | 3.32 |
1076 | 1119 | 6.101332 | TGAATTTGCATGATCCAAAAGCTAC | 58.899 | 36.000 | 0.00 | 0.00 | 35.97 | 3.58 |
1118 | 1161 | 5.189145 | GGTAACTATTCCCAAGAGTCAGGAA | 59.811 | 44.000 | 10.63 | 10.63 | 43.56 | 3.36 |
1144 | 1187 | 0.711670 | GCATCTGCACATGTTTTGCG | 59.288 | 50.000 | 3.80 | 0.00 | 43.34 | 4.85 |
1153 | 1196 | 1.269448 | ACATGTTTTGCGGGCTAAGTG | 59.731 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1158 | 1201 | 3.068873 | TGTTTTGCGGGCTAAGTGAAAAT | 59.931 | 39.130 | 0.00 | 0.00 | 0.00 | 1.82 |
1185 | 1228 | 6.618287 | TTTGAACCTTTCTGTGATACACTG | 57.382 | 37.500 | 0.00 | 0.00 | 35.11 | 3.66 |
1239 | 1283 | 4.970711 | AGAGAAATGCTGGATATCCACAG | 58.029 | 43.478 | 20.98 | 13.11 | 42.01 | 3.66 |
1248 | 1292 | 4.395625 | CTGGATATCCACAGTGCAATCAT | 58.604 | 43.478 | 20.98 | 0.00 | 42.01 | 2.45 |
1272 | 1323 | 9.994432 | CATGATGAAAGAAGTTGAGGTAAATAC | 57.006 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
1302 | 1356 | 4.080129 | TCAGCTTTCTCAATAGAATGGGCT | 60.080 | 41.667 | 0.00 | 0.00 | 41.36 | 5.19 |
1323 | 1377 | 1.067354 | GTTCTCCTGCCTTGCATTTGG | 60.067 | 52.381 | 0.00 | 0.00 | 38.13 | 3.28 |
1353 | 1407 | 7.199766 | TCAAAATTATATGATTGGTGGTTCGC | 58.800 | 34.615 | 0.00 | 0.00 | 0.00 | 4.70 |
1358 | 1412 | 0.950836 | TGATTGGTGGTTCGCTGTTG | 59.049 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
1366 | 1420 | 2.088423 | TGGTTCGCTGTTGTTCAGTTT | 58.912 | 42.857 | 0.00 | 0.00 | 45.23 | 2.66 |
1388 | 1442 | 9.052759 | AGTTTGATATTGTTATTAGCCTTACGG | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
1403 | 1457 | 5.716703 | AGCCTTACGGTCTTACCTTTTACTA | 59.283 | 40.000 | 0.00 | 0.00 | 35.66 | 1.82 |
1412 | 1466 | 7.363617 | CGGTCTTACCTTTTACTATCAGGTTCT | 60.364 | 40.741 | 0.00 | 0.00 | 41.42 | 3.01 |
1427 | 1481 | 3.515502 | CAGGTTCTACATCAGGGAGACAA | 59.484 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
1428 | 1482 | 4.163078 | CAGGTTCTACATCAGGGAGACAAT | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 2.71 |
1485 | 1541 | 8.675705 | TTCAGAAAATCATTACACAAGTCAGA | 57.324 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
1496 | 1552 | 3.577848 | ACACAAGTCAGAGATGAGCTTCT | 59.422 | 43.478 | 0.00 | 0.00 | 0.00 | 2.85 |
1498 | 1554 | 2.931325 | CAAGTCAGAGATGAGCTTCTGC | 59.069 | 50.000 | 8.07 | 4.46 | 40.05 | 4.26 |
1533 | 1589 | 2.703536 | TCAGGTTTTGTCTGCTAGACCA | 59.296 | 45.455 | 11.99 | 1.22 | 44.44 | 4.02 |
1558 | 1614 | 6.959639 | TTTCTGGCCCATAGAAATATGTTC | 57.040 | 37.500 | 11.66 | 0.00 | 38.76 | 3.18 |
1627 | 1833 | 0.839946 | AAGAGCAGGACAACCACACT | 59.160 | 50.000 | 0.00 | 0.00 | 38.94 | 3.55 |
1680 | 1886 | 4.576873 | TCGGTTTCATCAAAGTGCTTTACA | 59.423 | 37.500 | 0.00 | 0.00 | 0.00 | 2.41 |
1681 | 1887 | 5.066634 | TCGGTTTCATCAAAGTGCTTTACAA | 59.933 | 36.000 | 0.00 | 0.00 | 0.00 | 2.41 |
1724 | 1930 | 0.971386 | ACAAACGTCCTCCGGTATGT | 59.029 | 50.000 | 0.00 | 0.00 | 42.24 | 2.29 |
1741 | 1947 | 5.163591 | CGGTATGTATTTTCCTTGTTTCCCC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 4.81 |
1746 | 1952 | 7.475137 | TGTATTTTCCTTGTTTCCCCTTATG | 57.525 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
1815 | 2164 | 4.142513 | CCCTAAGTAGAACTCGTACGCTTT | 60.143 | 45.833 | 11.24 | 5.59 | 0.00 | 3.51 |
1838 | 2198 | 6.942532 | TGTTCTCACTTTTAAATGTCTGCT | 57.057 | 33.333 | 3.86 | 0.00 | 0.00 | 4.24 |
1849 | 2209 | 2.768253 | ATGTCTGCTTGACCATCGAA | 57.232 | 45.000 | 0.00 | 0.00 | 44.75 | 3.71 |
1861 | 2221 | 3.004419 | TGACCATCGAATCGTACTCCATC | 59.996 | 47.826 | 1.52 | 0.00 | 0.00 | 3.51 |
1906 | 2266 | 1.544093 | CCAGCCATGCCGTTATCATCT | 60.544 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
1907 | 2267 | 1.534163 | CAGCCATGCCGTTATCATCTG | 59.466 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
1908 | 2268 | 1.141657 | AGCCATGCCGTTATCATCTGT | 59.858 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1909 | 2269 | 2.368548 | AGCCATGCCGTTATCATCTGTA | 59.631 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
1910 | 2270 | 3.138304 | GCCATGCCGTTATCATCTGTAA | 58.862 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
1911 | 2271 | 3.058914 | GCCATGCCGTTATCATCTGTAAC | 60.059 | 47.826 | 0.00 | 0.00 | 0.00 | 2.50 |
1913 | 2273 | 4.212004 | CCATGCCGTTATCATCTGTAACTG | 59.788 | 45.833 | 0.00 | 0.00 | 31.47 | 3.16 |
1914 | 2274 | 4.729227 | TGCCGTTATCATCTGTAACTGA | 57.271 | 40.909 | 0.00 | 0.00 | 31.47 | 3.41 |
1915 | 2275 | 5.276461 | TGCCGTTATCATCTGTAACTGAT | 57.724 | 39.130 | 0.00 | 0.00 | 36.19 | 2.90 |
1916 | 2276 | 6.399639 | TGCCGTTATCATCTGTAACTGATA | 57.600 | 37.500 | 0.00 | 0.00 | 34.14 | 2.15 |
1923 | 2283 | 5.079689 | TCATCTGTAACTGATAACGGCAA | 57.920 | 39.130 | 0.00 | 0.00 | 0.00 | 4.52 |
2037 | 2532 | 7.831753 | TCTGTAACTGAACTAAGAATCTCTGG | 58.168 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
2060 | 2555 | 8.455903 | TGGCATCCTTATTAATTTTCTGAGAG | 57.544 | 34.615 | 0.00 | 0.00 | 0.00 | 3.20 |
2075 | 2570 | 2.630580 | CTGAGAGGCCTACAATCCTACC | 59.369 | 54.545 | 4.42 | 0.00 | 31.71 | 3.18 |
2119 | 2820 | 6.859420 | TCGTTTTCATGTTCTGAGAAATCA | 57.141 | 33.333 | 0.00 | 0.00 | 34.68 | 2.57 |
2167 | 2868 | 9.538508 | AAGTTCTTGTAAGAAGTAACACGTATT | 57.461 | 29.630 | 13.45 | 0.00 | 45.43 | 1.89 |
2239 | 2940 | 1.818674 | GTACAAACCCTTGGATGCCAG | 59.181 | 52.381 | 0.00 | 0.00 | 36.82 | 4.85 |
2253 | 2954 | 7.255906 | CCTTGGATGCCAGCATAATTTATTGTA | 60.256 | 37.037 | 4.85 | 0.00 | 36.70 | 2.41 |
2277 | 2978 | 6.399639 | TGTTCTCACACACACTACTATTCA | 57.600 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2279 | 2980 | 8.117813 | TGTTCTCACACACACTACTATTCATA | 57.882 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
2302 | 3003 | 9.270640 | CATAGGTAGGAAAAATGAGAAGATCTG | 57.729 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
2306 | 3007 | 8.454894 | GGTAGGAAAAATGAGAAGATCTGAAAC | 58.545 | 37.037 | 0.00 | 0.00 | 0.00 | 2.78 |
2308 | 3009 | 7.237255 | AGGAAAAATGAGAAGATCTGAAACCT | 58.763 | 34.615 | 0.00 | 0.00 | 0.00 | 3.50 |
2309 | 3010 | 7.392953 | AGGAAAAATGAGAAGATCTGAAACCTC | 59.607 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
2350 | 3464 | 7.880059 | ACGATATGTGTCATTACATGATCTG | 57.120 | 36.000 | 0.00 | 0.00 | 41.18 | 2.90 |
2352 | 3466 | 7.383300 | ACGATATGTGTCATTACATGATCTGTG | 59.617 | 37.037 | 0.00 | 3.29 | 41.18 | 3.66 |
2353 | 3467 | 7.383300 | CGATATGTGTCATTACATGATCTGTGT | 59.617 | 37.037 | 0.00 | 8.89 | 41.18 | 3.72 |
2354 | 3468 | 9.696917 | GATATGTGTCATTACATGATCTGTGTA | 57.303 | 33.333 | 0.00 | 7.24 | 41.18 | 2.90 |
2356 | 3470 | 8.969260 | ATGTGTCATTACATGATCTGTGTATT | 57.031 | 30.769 | 0.00 | 6.45 | 42.04 | 1.89 |
2358 | 3472 | 9.313118 | TGTGTCATTACATGATCTGTGTATTAC | 57.687 | 33.333 | 0.00 | 9.95 | 42.04 | 1.89 |
2359 | 3473 | 9.313118 | GTGTCATTACATGATCTGTGTATTACA | 57.687 | 33.333 | 0.00 | 11.61 | 42.04 | 2.41 |
2360 | 3474 | 9.533253 | TGTCATTACATGATCTGTGTATTACAG | 57.467 | 33.333 | 0.00 | 0.75 | 45.10 | 2.74 |
2361 | 3475 | 9.534565 | GTCATTACATGATCTGTGTATTACAGT | 57.465 | 33.333 | 0.00 | 0.00 | 45.08 | 3.55 |
2387 | 3935 | 7.934457 | ACTATTCTGTTGGCATTTACATCATC | 58.066 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
2418 | 3966 | 1.612950 | TGTCGGTACCAGTTAAGCGAA | 59.387 | 47.619 | 13.54 | 0.00 | 45.85 | 4.70 |
2419 | 3967 | 1.988467 | GTCGGTACCAGTTAAGCGAAC | 59.012 | 52.381 | 13.54 | 0.00 | 45.85 | 3.95 |
2420 | 3968 | 1.612950 | TCGGTACCAGTTAAGCGAACA | 59.387 | 47.619 | 13.54 | 0.00 | 42.04 | 3.18 |
2421 | 3969 | 1.990563 | CGGTACCAGTTAAGCGAACAG | 59.009 | 52.381 | 13.54 | 0.00 | 40.86 | 3.16 |
2427 | 3975 | 2.159653 | CCAGTTAAGCGAACAGATGTGC | 60.160 | 50.000 | 7.21 | 0.00 | 40.86 | 4.57 |
2530 | 4078 | 2.224646 | TGCACCTGTGTTGTTATGCCTA | 60.225 | 45.455 | 0.00 | 0.00 | 32.02 | 3.93 |
2531 | 4079 | 3.016736 | GCACCTGTGTTGTTATGCCTAT | 58.983 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2532 | 4080 | 3.443681 | GCACCTGTGTTGTTATGCCTATT | 59.556 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
2534 | 4082 | 5.401550 | CACCTGTGTTGTTATGCCTATTTG | 58.598 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
2535 | 4083 | 5.182950 | CACCTGTGTTGTTATGCCTATTTGA | 59.817 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2536 | 4084 | 5.951747 | ACCTGTGTTGTTATGCCTATTTGAT | 59.048 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2537 | 4085 | 6.095440 | ACCTGTGTTGTTATGCCTATTTGATC | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
2538 | 4086 | 6.095300 | CCTGTGTTGTTATGCCTATTTGATCA | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
2539 | 4087 | 7.362834 | CCTGTGTTGTTATGCCTATTTGATCAA | 60.363 | 37.037 | 3.38 | 3.38 | 0.00 | 2.57 |
2540 | 4088 | 7.537715 | TGTGTTGTTATGCCTATTTGATCAAG | 58.462 | 34.615 | 8.41 | 0.00 | 0.00 | 3.02 |
2541 | 4089 | 7.176515 | TGTGTTGTTATGCCTATTTGATCAAGT | 59.823 | 33.333 | 8.41 | 8.52 | 0.00 | 3.16 |
2543 | 4091 | 7.392953 | TGTTGTTATGCCTATTTGATCAAGTCA | 59.607 | 33.333 | 6.74 | 0.20 | 34.25 | 3.41 |
2544 | 4092 | 7.936496 | TGTTATGCCTATTTGATCAAGTCAA | 57.064 | 32.000 | 6.74 | 0.00 | 44.87 | 3.18 |
2545 | 4093 | 8.523915 | TGTTATGCCTATTTGATCAAGTCAAT | 57.476 | 30.769 | 6.74 | 1.22 | 45.77 | 2.57 |
2546 | 4094 | 8.970020 | TGTTATGCCTATTTGATCAAGTCAATT | 58.030 | 29.630 | 6.74 | 0.00 | 45.77 | 2.32 |
2547 | 4095 | 9.807649 | GTTATGCCTATTTGATCAAGTCAATTT | 57.192 | 29.630 | 6.74 | 0.00 | 45.77 | 1.82 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
3 | 4 | 6.762187 | TCAACTCGTTGTTAGGTGAATTTACA | 59.238 | 34.615 | 9.38 | 0.00 | 37.73 | 2.41 |
4 | 5 | 7.181143 | TCAACTCGTTGTTAGGTGAATTTAC | 57.819 | 36.000 | 9.38 | 0.00 | 37.73 | 2.01 |
16 | 17 | 3.869065 | TCCTCAGTTTCAACTCGTTGTT | 58.131 | 40.909 | 9.38 | 0.00 | 41.16 | 2.83 |
31 | 32 | 0.529378 | GCTGGTTTGGCATTCCTCAG | 59.471 | 55.000 | 9.30 | 5.19 | 0.00 | 3.35 |
34 | 35 | 0.112995 | TCTGCTGGTTTGGCATTCCT | 59.887 | 50.000 | 9.30 | 0.00 | 39.07 | 3.36 |
39 | 40 | 0.537143 | AATCGTCTGCTGGTTTGGCA | 60.537 | 50.000 | 0.00 | 0.00 | 38.10 | 4.92 |
69 | 70 | 1.605971 | GGTCGTCTCCTTCCAGGTCC | 61.606 | 65.000 | 0.00 | 0.00 | 36.53 | 4.46 |
75 | 76 | 0.316204 | TGTTTCGGTCGTCTCCTTCC | 59.684 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
77 | 78 | 1.137479 | TGTTGTTTCGGTCGTCTCCTT | 59.863 | 47.619 | 0.00 | 0.00 | 0.00 | 3.36 |
88 | 89 | 1.525619 | GTCTCCTCCGTTGTTGTTTCG | 59.474 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
91 | 92 | 1.485066 | ACTGTCTCCTCCGTTGTTGTT | 59.515 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
101 | 102 | 2.814919 | TCGTCTCTTGAACTGTCTCCTC | 59.185 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
109 | 117 | 3.427773 | GCGGAACTATCGTCTCTTGAACT | 60.428 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
115 | 123 | 1.671845 | GAGTGCGGAACTATCGTCTCT | 59.328 | 52.381 | 0.00 | 0.00 | 40.07 | 3.10 |
135 | 143 | 6.150307 | AGTCTAGCATCGAATCATACCACTAG | 59.850 | 42.308 | 0.00 | 0.00 | 0.00 | 2.57 |
143 | 151 | 4.141846 | ACACCAAGTCTAGCATCGAATCAT | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
146 | 154 | 3.895232 | ACACCAAGTCTAGCATCGAAT | 57.105 | 42.857 | 0.00 | 0.00 | 0.00 | 3.34 |
183 | 191 | 1.318576 | GGCTAAAACCACAGCACACT | 58.681 | 50.000 | 0.00 | 0.00 | 39.63 | 3.55 |
189 | 199 | 1.276989 | TCTACGGGGCTAAAACCACAG | 59.723 | 52.381 | 0.00 | 0.00 | 29.74 | 3.66 |
206 | 216 | 7.523293 | TTGAAAACAGCATGGAAATCTTCTA | 57.477 | 32.000 | 0.00 | 0.00 | 43.62 | 2.10 |
207 | 217 | 6.409524 | TTGAAAACAGCATGGAAATCTTCT | 57.590 | 33.333 | 0.00 | 0.00 | 43.62 | 2.85 |
208 | 218 | 7.601508 | AGAATTGAAAACAGCATGGAAATCTTC | 59.398 | 33.333 | 0.00 | 0.00 | 43.62 | 2.87 |
209 | 219 | 7.447594 | AGAATTGAAAACAGCATGGAAATCTT | 58.552 | 30.769 | 0.00 | 0.00 | 43.62 | 2.40 |
210 | 220 | 7.001099 | AGAATTGAAAACAGCATGGAAATCT | 57.999 | 32.000 | 0.00 | 0.00 | 43.62 | 2.40 |
211 | 221 | 8.937634 | ATAGAATTGAAAACAGCATGGAAATC | 57.062 | 30.769 | 0.00 | 0.00 | 43.62 | 2.17 |
215 | 225 | 9.859427 | CTTTAATAGAATTGAAAACAGCATGGA | 57.141 | 29.630 | 0.00 | 0.00 | 43.62 | 3.41 |
216 | 226 | 8.598075 | GCTTTAATAGAATTGAAAACAGCATGG | 58.402 | 33.333 | 0.00 | 0.00 | 43.62 | 3.66 |
217 | 227 | 8.316046 | CGCTTTAATAGAATTGAAAACAGCATG | 58.684 | 33.333 | 0.00 | 0.00 | 46.00 | 4.06 |
218 | 228 | 8.028938 | ACGCTTTAATAGAATTGAAAACAGCAT | 58.971 | 29.630 | 0.00 | 0.00 | 0.00 | 3.79 |
219 | 229 | 7.367285 | ACGCTTTAATAGAATTGAAAACAGCA | 58.633 | 30.769 | 0.00 | 0.00 | 0.00 | 4.41 |
220 | 230 | 7.008357 | GGACGCTTTAATAGAATTGAAAACAGC | 59.992 | 37.037 | 0.00 | 0.00 | 0.00 | 4.40 |
221 | 231 | 7.484959 | GGGACGCTTTAATAGAATTGAAAACAG | 59.515 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
222 | 232 | 7.309920 | GGGACGCTTTAATAGAATTGAAAACA | 58.690 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
223 | 233 | 6.750501 | GGGGACGCTTTAATAGAATTGAAAAC | 59.249 | 38.462 | 0.00 | 0.00 | 0.00 | 2.43 |
224 | 234 | 6.434652 | TGGGGACGCTTTAATAGAATTGAAAA | 59.565 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
225 | 235 | 5.946972 | TGGGGACGCTTTAATAGAATTGAAA | 59.053 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
226 | 236 | 5.502079 | TGGGGACGCTTTAATAGAATTGAA | 58.498 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
227 | 237 | 5.105567 | TGGGGACGCTTTAATAGAATTGA | 57.894 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
228 | 238 | 5.357032 | ACTTGGGGACGCTTTAATAGAATTG | 59.643 | 40.000 | 0.00 | 0.00 | 0.00 | 2.32 |
229 | 239 | 5.506708 | ACTTGGGGACGCTTTAATAGAATT | 58.493 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
230 | 240 | 5.112129 | ACTTGGGGACGCTTTAATAGAAT | 57.888 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
231 | 241 | 4.563140 | ACTTGGGGACGCTTTAATAGAA | 57.437 | 40.909 | 0.00 | 0.00 | 0.00 | 2.10 |
232 | 242 | 4.258543 | CAACTTGGGGACGCTTTAATAGA | 58.741 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
233 | 243 | 4.007659 | ACAACTTGGGGACGCTTTAATAG | 58.992 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
234 | 244 | 4.023726 | ACAACTTGGGGACGCTTTAATA | 57.976 | 40.909 | 0.00 | 0.00 | 0.00 | 0.98 |
235 | 245 | 2.871453 | ACAACTTGGGGACGCTTTAAT | 58.129 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
236 | 246 | 2.351706 | ACAACTTGGGGACGCTTTAA | 57.648 | 45.000 | 0.00 | 0.00 | 0.00 | 1.52 |
237 | 247 | 3.008157 | TGATACAACTTGGGGACGCTTTA | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
238 | 248 | 2.224670 | TGATACAACTTGGGGACGCTTT | 60.225 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
239 | 249 | 1.349688 | TGATACAACTTGGGGACGCTT | 59.650 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
240 | 250 | 0.981183 | TGATACAACTTGGGGACGCT | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 5.07 |
241 | 251 | 1.816074 | TTGATACAACTTGGGGACGC | 58.184 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
242 | 252 | 3.142951 | TGTTTGATACAACTTGGGGACG | 58.857 | 45.455 | 0.00 | 0.00 | 32.64 | 4.79 |
243 | 253 | 5.722021 | AATGTTTGATACAACTTGGGGAC | 57.278 | 39.130 | 0.00 | 0.00 | 40.89 | 4.46 |
244 | 254 | 6.739331 | AAAATGTTTGATACAACTTGGGGA | 57.261 | 33.333 | 0.00 | 0.00 | 40.89 | 4.81 |
280 | 290 | 8.931385 | ACGACAATTTACCGTACATATAAAGT | 57.069 | 30.769 | 0.00 | 0.00 | 34.52 | 2.66 |
290 | 300 | 8.243426 | AGTAAAGATGTACGACAATTTACCGTA | 58.757 | 33.333 | 20.24 | 0.00 | 40.91 | 4.02 |
291 | 301 | 7.092716 | AGTAAAGATGTACGACAATTTACCGT | 58.907 | 34.615 | 20.24 | 0.00 | 40.91 | 4.83 |
292 | 302 | 7.515957 | AGTAAAGATGTACGACAATTTACCG | 57.484 | 36.000 | 20.24 | 0.00 | 40.91 | 4.02 |
293 | 303 | 8.811378 | GGTAGTAAAGATGTACGACAATTTACC | 58.189 | 37.037 | 20.24 | 13.03 | 40.91 | 2.85 |
294 | 304 | 9.357652 | TGGTAGTAAAGATGTACGACAATTTAC | 57.642 | 33.333 | 18.48 | 18.48 | 40.64 | 2.01 |
296 | 306 | 9.444600 | AATGGTAGTAAAGATGTACGACAATTT | 57.555 | 29.630 | 0.00 | 0.00 | 32.44 | 1.82 |
298 | 308 | 9.525409 | GTAATGGTAGTAAAGATGTACGACAAT | 57.475 | 33.333 | 0.00 | 0.00 | 32.90 | 2.71 |
299 | 309 | 7.975616 | GGTAATGGTAGTAAAGATGTACGACAA | 59.024 | 37.037 | 0.00 | 0.00 | 32.90 | 3.18 |
300 | 310 | 7.416664 | GGGTAATGGTAGTAAAGATGTACGACA | 60.417 | 40.741 | 0.00 | 0.00 | 32.90 | 4.35 |
301 | 311 | 6.920210 | GGGTAATGGTAGTAAAGATGTACGAC | 59.080 | 42.308 | 0.00 | 0.00 | 0.00 | 4.34 |
302 | 312 | 6.238731 | CGGGTAATGGTAGTAAAGATGTACGA | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 3.43 |
303 | 313 | 5.916883 | CGGGTAATGGTAGTAAAGATGTACG | 59.083 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
304 | 314 | 5.693555 | GCGGGTAATGGTAGTAAAGATGTAC | 59.306 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
305 | 315 | 5.363292 | TGCGGGTAATGGTAGTAAAGATGTA | 59.637 | 40.000 | 0.00 | 0.00 | 0.00 | 2.29 |
306 | 316 | 4.162698 | TGCGGGTAATGGTAGTAAAGATGT | 59.837 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
307 | 317 | 4.699637 | TGCGGGTAATGGTAGTAAAGATG | 58.300 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
308 | 318 | 5.562298 | ATGCGGGTAATGGTAGTAAAGAT | 57.438 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
309 | 319 | 5.120399 | CAATGCGGGTAATGGTAGTAAAGA | 58.880 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
310 | 320 | 4.261031 | GCAATGCGGGTAATGGTAGTAAAG | 60.261 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
311 | 321 | 3.628487 | GCAATGCGGGTAATGGTAGTAAA | 59.372 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
312 | 322 | 3.207778 | GCAATGCGGGTAATGGTAGTAA | 58.792 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
313 | 323 | 2.170817 | TGCAATGCGGGTAATGGTAGTA | 59.829 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
314 | 324 | 1.065053 | TGCAATGCGGGTAATGGTAGT | 60.065 | 47.619 | 0.00 | 0.00 | 0.00 | 2.73 |
315 | 325 | 1.674359 | TGCAATGCGGGTAATGGTAG | 58.326 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
316 | 326 | 2.356665 | ATGCAATGCGGGTAATGGTA | 57.643 | 45.000 | 0.00 | 0.00 | 0.00 | 3.25 |
317 | 327 | 2.356665 | TATGCAATGCGGGTAATGGT | 57.643 | 45.000 | 0.00 | 0.00 | 0.00 | 3.55 |
318 | 328 | 3.084039 | AGATATGCAATGCGGGTAATGG | 58.916 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
319 | 329 | 4.694982 | TGTAGATATGCAATGCGGGTAATG | 59.305 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
320 | 330 | 4.905429 | TGTAGATATGCAATGCGGGTAAT | 58.095 | 39.130 | 0.00 | 0.00 | 0.00 | 1.89 |
321 | 331 | 4.344359 | TGTAGATATGCAATGCGGGTAA | 57.656 | 40.909 | 0.00 | 0.00 | 0.00 | 2.85 |
322 | 332 | 4.551702 | ATGTAGATATGCAATGCGGGTA | 57.448 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
323 | 333 | 2.928801 | TGTAGATATGCAATGCGGGT | 57.071 | 45.000 | 0.00 | 0.00 | 0.00 | 5.28 |
324 | 334 | 7.734924 | AATATATGTAGATATGCAATGCGGG | 57.265 | 36.000 | 0.00 | 0.00 | 0.00 | 6.13 |
346 | 356 | 9.452287 | AAAGCAATGGACTGCATAATTAAAAAT | 57.548 | 25.926 | 0.00 | 0.00 | 45.18 | 1.82 |
347 | 357 | 8.845413 | AAAGCAATGGACTGCATAATTAAAAA | 57.155 | 26.923 | 0.00 | 0.00 | 45.18 | 1.94 |
348 | 358 | 8.313292 | AGAAAGCAATGGACTGCATAATTAAAA | 58.687 | 29.630 | 0.00 | 0.00 | 45.18 | 1.52 |
349 | 359 | 7.839907 | AGAAAGCAATGGACTGCATAATTAAA | 58.160 | 30.769 | 0.00 | 0.00 | 45.18 | 1.52 |
350 | 360 | 7.408756 | AGAAAGCAATGGACTGCATAATTAA | 57.591 | 32.000 | 0.00 | 0.00 | 45.18 | 1.40 |
351 | 361 | 7.555914 | TGTAGAAAGCAATGGACTGCATAATTA | 59.444 | 33.333 | 0.00 | 0.00 | 45.18 | 1.40 |
352 | 362 | 5.927281 | AGAAAGCAATGGACTGCATAATT | 57.073 | 34.783 | 0.00 | 0.00 | 45.18 | 1.40 |
353 | 363 | 5.887598 | TGTAGAAAGCAATGGACTGCATAAT | 59.112 | 36.000 | 0.00 | 0.00 | 45.18 | 1.28 |
354 | 364 | 5.123820 | GTGTAGAAAGCAATGGACTGCATAA | 59.876 | 40.000 | 0.00 | 0.00 | 45.18 | 1.90 |
355 | 365 | 4.635765 | GTGTAGAAAGCAATGGACTGCATA | 59.364 | 41.667 | 0.00 | 0.00 | 45.18 | 3.14 |
356 | 366 | 3.441572 | GTGTAGAAAGCAATGGACTGCAT | 59.558 | 43.478 | 0.00 | 0.00 | 45.18 | 3.96 |
357 | 367 | 2.813754 | GTGTAGAAAGCAATGGACTGCA | 59.186 | 45.455 | 0.00 | 0.00 | 45.18 | 4.41 |
358 | 368 | 2.813754 | TGTGTAGAAAGCAATGGACTGC | 59.186 | 45.455 | 0.00 | 0.00 | 42.97 | 4.40 |
359 | 369 | 4.318332 | TCTGTGTAGAAAGCAATGGACTG | 58.682 | 43.478 | 0.00 | 0.00 | 0.00 | 3.51 |
360 | 370 | 4.623932 | TCTGTGTAGAAAGCAATGGACT | 57.376 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
361 | 371 | 5.689383 | TTTCTGTGTAGAAAGCAATGGAC | 57.311 | 39.130 | 0.00 | 0.00 | 45.46 | 4.02 |
372 | 382 | 9.462606 | TCACTCATAGACTTATTTCTGTGTAGA | 57.537 | 33.333 | 0.00 | 0.00 | 36.42 | 2.59 |
373 | 383 | 9.509855 | GTCACTCATAGACTTATTTCTGTGTAG | 57.490 | 37.037 | 0.00 | 0.00 | 36.42 | 2.74 |
374 | 384 | 9.020731 | TGTCACTCATAGACTTATTTCTGTGTA | 57.979 | 33.333 | 0.00 | 0.00 | 36.42 | 2.90 |
375 | 385 | 7.896811 | TGTCACTCATAGACTTATTTCTGTGT | 58.103 | 34.615 | 0.00 | 0.00 | 36.42 | 3.72 |
376 | 386 | 8.763049 | TTGTCACTCATAGACTTATTTCTGTG | 57.237 | 34.615 | 0.00 | 0.00 | 36.37 | 3.66 |
377 | 387 | 9.778741 | TTTTGTCACTCATAGACTTATTTCTGT | 57.221 | 29.630 | 0.00 | 0.00 | 36.94 | 3.41 |
383 | 393 | 9.950496 | ACAAGATTTTGTCACTCATAGACTTAT | 57.050 | 29.630 | 0.00 | 0.00 | 44.00 | 1.73 |
385 | 395 | 9.429359 | CTACAAGATTTTGTCACTCATAGACTT | 57.571 | 33.333 | 4.66 | 0.00 | 44.00 | 3.01 |
386 | 396 | 8.589338 | ACTACAAGATTTTGTCACTCATAGACT | 58.411 | 33.333 | 4.66 | 0.00 | 44.00 | 3.24 |
387 | 397 | 8.764524 | ACTACAAGATTTTGTCACTCATAGAC | 57.235 | 34.615 | 4.66 | 0.00 | 44.00 | 2.59 |
388 | 398 | 8.035394 | GGACTACAAGATTTTGTCACTCATAGA | 58.965 | 37.037 | 4.66 | 0.00 | 44.00 | 1.98 |
389 | 399 | 8.037758 | AGGACTACAAGATTTTGTCACTCATAG | 58.962 | 37.037 | 4.66 | 0.00 | 44.00 | 2.23 |
390 | 400 | 7.907389 | AGGACTACAAGATTTTGTCACTCATA | 58.093 | 34.615 | 4.66 | 0.00 | 44.00 | 2.15 |
391 | 401 | 6.773638 | AGGACTACAAGATTTTGTCACTCAT | 58.226 | 36.000 | 4.66 | 0.00 | 44.00 | 2.90 |
392 | 402 | 6.174720 | AGGACTACAAGATTTTGTCACTCA | 57.825 | 37.500 | 4.66 | 0.00 | 44.00 | 3.41 |
393 | 403 | 7.226720 | TCAAAGGACTACAAGATTTTGTCACTC | 59.773 | 37.037 | 4.66 | 0.00 | 44.00 | 3.51 |
394 | 404 | 7.054124 | TCAAAGGACTACAAGATTTTGTCACT | 58.946 | 34.615 | 4.66 | 0.00 | 44.00 | 3.41 |
395 | 405 | 7.259290 | TCAAAGGACTACAAGATTTTGTCAC | 57.741 | 36.000 | 4.66 | 0.00 | 44.00 | 3.67 |
396 | 406 | 8.463930 | AATCAAAGGACTACAAGATTTTGTCA | 57.536 | 30.769 | 4.66 | 0.00 | 44.00 | 3.58 |
397 | 407 | 9.399403 | GAAATCAAAGGACTACAAGATTTTGTC | 57.601 | 33.333 | 4.66 | 0.00 | 44.00 | 3.18 |
399 | 409 | 9.918630 | ATGAAATCAAAGGACTACAAGATTTTG | 57.081 | 29.630 | 0.00 | 0.00 | 36.25 | 2.44 |
401 | 411 | 9.918630 | CAATGAAATCAAAGGACTACAAGATTT | 57.081 | 29.630 | 0.00 | 0.00 | 38.11 | 2.17 |
402 | 412 | 9.082313 | ACAATGAAATCAAAGGACTACAAGATT | 57.918 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
403 | 413 | 8.641498 | ACAATGAAATCAAAGGACTACAAGAT | 57.359 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
404 | 414 | 8.463930 | AACAATGAAATCAAAGGACTACAAGA | 57.536 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
406 | 416 | 9.959749 | GTAAACAATGAAATCAAAGGACTACAA | 57.040 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
407 | 417 | 9.126151 | TGTAAACAATGAAATCAAAGGACTACA | 57.874 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
408 | 418 | 9.959749 | TTGTAAACAATGAAATCAAAGGACTAC | 57.040 | 29.630 | 0.00 | 0.00 | 0.00 | 2.73 |
410 | 420 | 8.695456 | ACTTGTAAACAATGAAATCAAAGGACT | 58.305 | 29.630 | 0.00 | 0.00 | 35.02 | 3.85 |
411 | 421 | 8.755018 | CACTTGTAAACAATGAAATCAAAGGAC | 58.245 | 33.333 | 0.00 | 0.00 | 35.02 | 3.85 |
412 | 422 | 8.690884 | TCACTTGTAAACAATGAAATCAAAGGA | 58.309 | 29.630 | 0.00 | 0.00 | 35.02 | 3.36 |
413 | 423 | 8.870160 | TCACTTGTAAACAATGAAATCAAAGG | 57.130 | 30.769 | 0.00 | 0.00 | 35.02 | 3.11 |
415 | 425 | 8.763356 | GCATCACTTGTAAACAATGAAATCAAA | 58.237 | 29.630 | 10.09 | 0.00 | 35.02 | 2.69 |
416 | 426 | 7.924947 | TGCATCACTTGTAAACAATGAAATCAA | 59.075 | 29.630 | 10.09 | 0.00 | 35.02 | 2.57 |
417 | 427 | 7.432059 | TGCATCACTTGTAAACAATGAAATCA | 58.568 | 30.769 | 10.09 | 0.00 | 35.02 | 2.57 |
418 | 428 | 7.062605 | CCTGCATCACTTGTAAACAATGAAATC | 59.937 | 37.037 | 10.09 | 5.67 | 35.02 | 2.17 |
419 | 429 | 6.869913 | CCTGCATCACTTGTAAACAATGAAAT | 59.130 | 34.615 | 10.09 | 0.00 | 35.02 | 2.17 |
420 | 430 | 6.215121 | CCTGCATCACTTGTAAACAATGAAA | 58.785 | 36.000 | 10.09 | 2.89 | 35.02 | 2.69 |
421 | 431 | 5.278907 | CCCTGCATCACTTGTAAACAATGAA | 60.279 | 40.000 | 10.09 | 0.00 | 35.02 | 2.57 |
422 | 432 | 4.218200 | CCCTGCATCACTTGTAAACAATGA | 59.782 | 41.667 | 0.00 | 3.80 | 35.02 | 2.57 |
423 | 433 | 4.487948 | CCCTGCATCACTTGTAAACAATG | 58.512 | 43.478 | 0.00 | 0.00 | 35.02 | 2.82 |
424 | 434 | 3.511146 | CCCCTGCATCACTTGTAAACAAT | 59.489 | 43.478 | 0.00 | 0.00 | 35.02 | 2.71 |
425 | 435 | 2.890311 | CCCCTGCATCACTTGTAAACAA | 59.110 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
426 | 436 | 2.158534 | ACCCCTGCATCACTTGTAAACA | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
427 | 437 | 2.514803 | ACCCCTGCATCACTTGTAAAC | 58.485 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
428 | 438 | 2.890311 | CAACCCCTGCATCACTTGTAAA | 59.110 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
429 | 439 | 2.513753 | CAACCCCTGCATCACTTGTAA | 58.486 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
430 | 440 | 2.198827 | CAACCCCTGCATCACTTGTA | 57.801 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
431 | 441 | 3.040965 | CAACCCCTGCATCACTTGT | 57.959 | 52.632 | 0.00 | 0.00 | 0.00 | 3.16 |
441 | 451 | 0.465287 | AAAGTGCAAAGCAACCCCTG | 59.535 | 50.000 | 0.00 | 0.00 | 41.47 | 4.45 |
442 | 452 | 1.138859 | GAAAAGTGCAAAGCAACCCCT | 59.861 | 47.619 | 0.00 | 0.00 | 41.47 | 4.79 |
443 | 453 | 1.138859 | AGAAAAGTGCAAAGCAACCCC | 59.861 | 47.619 | 0.00 | 0.00 | 41.47 | 4.95 |
444 | 454 | 2.602257 | AGAAAAGTGCAAAGCAACCC | 57.398 | 45.000 | 0.00 | 0.00 | 41.47 | 4.11 |
445 | 455 | 6.257630 | TGAAATAAGAAAAGTGCAAAGCAACC | 59.742 | 34.615 | 0.00 | 0.00 | 41.47 | 3.77 |
446 | 456 | 7.232945 | TGAAATAAGAAAAGTGCAAAGCAAC | 57.767 | 32.000 | 0.00 | 0.00 | 41.47 | 4.17 |
447 | 457 | 7.041916 | CCATGAAATAAGAAAAGTGCAAAGCAA | 60.042 | 33.333 | 0.00 | 0.00 | 41.47 | 3.91 |
448 | 458 | 6.424509 | CCATGAAATAAGAAAAGTGCAAAGCA | 59.575 | 34.615 | 0.00 | 0.00 | 35.60 | 3.91 |
449 | 459 | 6.646240 | TCCATGAAATAAGAAAAGTGCAAAGC | 59.354 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
450 | 460 | 8.653338 | CATCCATGAAATAAGAAAAGTGCAAAG | 58.347 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
451 | 461 | 7.118101 | GCATCCATGAAATAAGAAAAGTGCAAA | 59.882 | 33.333 | 0.00 | 0.00 | 0.00 | 3.68 |
452 | 462 | 6.591062 | GCATCCATGAAATAAGAAAAGTGCAA | 59.409 | 34.615 | 0.00 | 0.00 | 0.00 | 4.08 |
453 | 463 | 6.071221 | AGCATCCATGAAATAAGAAAAGTGCA | 60.071 | 34.615 | 0.00 | 0.00 | 0.00 | 4.57 |
454 | 464 | 6.335777 | AGCATCCATGAAATAAGAAAAGTGC | 58.664 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
455 | 465 | 7.917505 | GGTAGCATCCATGAAATAAGAAAAGTG | 59.082 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
456 | 466 | 7.836183 | AGGTAGCATCCATGAAATAAGAAAAGT | 59.164 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
457 | 467 | 8.230472 | AGGTAGCATCCATGAAATAAGAAAAG | 57.770 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
458 | 468 | 8.055181 | AGAGGTAGCATCCATGAAATAAGAAAA | 58.945 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
459 | 469 | 7.577303 | AGAGGTAGCATCCATGAAATAAGAAA | 58.423 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
460 | 470 | 7.141758 | AGAGGTAGCATCCATGAAATAAGAA | 57.858 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
461 | 471 | 6.753913 | AGAGGTAGCATCCATGAAATAAGA | 57.246 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
462 | 472 | 7.675062 | AGTAGAGGTAGCATCCATGAAATAAG | 58.325 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
463 | 473 | 7.618019 | AGTAGAGGTAGCATCCATGAAATAA | 57.382 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
464 | 474 | 7.618019 | AAGTAGAGGTAGCATCCATGAAATA | 57.382 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
465 | 475 | 6.506538 | AAGTAGAGGTAGCATCCATGAAAT | 57.493 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
466 | 476 | 5.957771 | AAGTAGAGGTAGCATCCATGAAA | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
467 | 477 | 5.451937 | CGAAAGTAGAGGTAGCATCCATGAA | 60.452 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
468 | 478 | 4.038042 | CGAAAGTAGAGGTAGCATCCATGA | 59.962 | 45.833 | 0.00 | 0.00 | 0.00 | 3.07 |
469 | 479 | 4.038042 | TCGAAAGTAGAGGTAGCATCCATG | 59.962 | 45.833 | 0.00 | 0.00 | 0.00 | 3.66 |
470 | 480 | 4.215908 | TCGAAAGTAGAGGTAGCATCCAT | 58.784 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
471 | 481 | 3.628008 | TCGAAAGTAGAGGTAGCATCCA | 58.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
472 | 482 | 4.650754 | TTCGAAAGTAGAGGTAGCATCC | 57.349 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
473 | 483 | 5.892568 | TCTTTCGAAAGTAGAGGTAGCATC | 58.107 | 41.667 | 31.29 | 0.00 | 37.31 | 3.91 |
474 | 484 | 5.916661 | TCTTTCGAAAGTAGAGGTAGCAT | 57.083 | 39.130 | 31.29 | 0.00 | 37.31 | 3.79 |
475 | 485 | 5.243283 | ACTTCTTTCGAAAGTAGAGGTAGCA | 59.757 | 40.000 | 36.34 | 15.47 | 37.03 | 3.49 |
476 | 486 | 5.573669 | CACTTCTTTCGAAAGTAGAGGTAGC | 59.426 | 44.000 | 36.34 | 0.00 | 37.03 | 3.58 |
477 | 487 | 6.679843 | ACACTTCTTTCGAAAGTAGAGGTAG | 58.320 | 40.000 | 36.34 | 24.83 | 37.03 | 3.18 |
478 | 488 | 6.645790 | ACACTTCTTTCGAAAGTAGAGGTA | 57.354 | 37.500 | 36.34 | 17.32 | 37.03 | 3.08 |
479 | 489 | 5.532664 | ACACTTCTTTCGAAAGTAGAGGT | 57.467 | 39.130 | 36.34 | 30.19 | 37.03 | 3.85 |
480 | 490 | 8.535690 | AAATACACTTCTTTCGAAAGTAGAGG | 57.464 | 34.615 | 36.34 | 29.73 | 37.03 | 3.69 |
482 | 492 | 9.760077 | AGAAAATACACTTCTTTCGAAAGTAGA | 57.240 | 29.630 | 36.34 | 22.29 | 37.03 | 2.59 |
502 | 512 | 9.470399 | AACCAAACGGAAATAGGTATAGAAAAT | 57.530 | 29.630 | 0.00 | 0.00 | 31.10 | 1.82 |
503 | 513 | 8.866970 | AACCAAACGGAAATAGGTATAGAAAA | 57.133 | 30.769 | 0.00 | 0.00 | 31.10 | 2.29 |
504 | 514 | 8.866970 | AAACCAAACGGAAATAGGTATAGAAA | 57.133 | 30.769 | 0.00 | 0.00 | 31.10 | 2.52 |
505 | 515 | 9.956640 | TTAAACCAAACGGAAATAGGTATAGAA | 57.043 | 29.630 | 0.00 | 0.00 | 31.10 | 2.10 |
509 | 519 | 8.829612 | CGTATTAAACCAAACGGAAATAGGTAT | 58.170 | 33.333 | 0.00 | 0.00 | 31.10 | 2.73 |
510 | 520 | 8.195617 | CGTATTAAACCAAACGGAAATAGGTA | 57.804 | 34.615 | 0.00 | 0.00 | 31.10 | 3.08 |
511 | 521 | 7.075674 | CGTATTAAACCAAACGGAAATAGGT | 57.924 | 36.000 | 0.00 | 0.00 | 0.00 | 3.08 |
520 | 530 | 3.058777 | AGCACACCGTATTAAACCAAACG | 60.059 | 43.478 | 0.00 | 0.00 | 35.20 | 3.60 |
521 | 531 | 4.492791 | AGCACACCGTATTAAACCAAAC | 57.507 | 40.909 | 0.00 | 0.00 | 0.00 | 2.93 |
522 | 532 | 4.579340 | TGAAGCACACCGTATTAAACCAAA | 59.421 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
523 | 533 | 4.135306 | TGAAGCACACCGTATTAAACCAA | 58.865 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
524 | 534 | 3.741249 | TGAAGCACACCGTATTAAACCA | 58.259 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
525 | 535 | 4.752661 | TTGAAGCACACCGTATTAAACC | 57.247 | 40.909 | 0.00 | 0.00 | 0.00 | 3.27 |
549 | 559 | 9.740710 | AGTATAAAGCCACTTAGAAACTTCATT | 57.259 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
550 | 560 | 9.740710 | AAGTATAAAGCCACTTAGAAACTTCAT | 57.259 | 29.630 | 0.00 | 0.00 | 33.29 | 2.57 |
551 | 561 | 9.569122 | AAAGTATAAAGCCACTTAGAAACTTCA | 57.431 | 29.630 | 0.00 | 0.00 | 33.92 | 3.02 |
552 | 562 | 9.827411 | CAAAGTATAAAGCCACTTAGAAACTTC | 57.173 | 33.333 | 0.00 | 0.00 | 33.92 | 3.01 |
553 | 563 | 8.793592 | CCAAAGTATAAAGCCACTTAGAAACTT | 58.206 | 33.333 | 0.00 | 0.00 | 33.92 | 2.66 |
554 | 564 | 7.393515 | CCCAAAGTATAAAGCCACTTAGAAACT | 59.606 | 37.037 | 0.00 | 0.00 | 33.92 | 2.66 |
555 | 565 | 7.176165 | ACCCAAAGTATAAAGCCACTTAGAAAC | 59.824 | 37.037 | 0.00 | 0.00 | 33.92 | 2.78 |
556 | 566 | 7.235804 | ACCCAAAGTATAAAGCCACTTAGAAA | 58.764 | 34.615 | 0.00 | 0.00 | 33.92 | 2.52 |
557 | 567 | 6.786122 | ACCCAAAGTATAAAGCCACTTAGAA | 58.214 | 36.000 | 0.00 | 0.00 | 33.92 | 2.10 |
558 | 568 | 6.013206 | TGACCCAAAGTATAAAGCCACTTAGA | 60.013 | 38.462 | 0.00 | 0.00 | 33.92 | 2.10 |
559 | 569 | 6.177610 | TGACCCAAAGTATAAAGCCACTTAG | 58.822 | 40.000 | 0.00 | 0.00 | 33.92 | 2.18 |
560 | 570 | 6.129414 | TGACCCAAAGTATAAAGCCACTTA | 57.871 | 37.500 | 0.00 | 0.00 | 33.92 | 2.24 |
561 | 571 | 4.993028 | TGACCCAAAGTATAAAGCCACTT | 58.007 | 39.130 | 0.00 | 0.00 | 36.56 | 3.16 |
562 | 572 | 4.042934 | ACTGACCCAAAGTATAAAGCCACT | 59.957 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
563 | 573 | 4.332828 | ACTGACCCAAAGTATAAAGCCAC | 58.667 | 43.478 | 0.00 | 0.00 | 0.00 | 5.01 |
564 | 574 | 4.650972 | ACTGACCCAAAGTATAAAGCCA | 57.349 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
565 | 575 | 9.433153 | GTATATACTGACCCAAAGTATAAAGCC | 57.567 | 37.037 | 5.58 | 0.00 | 43.08 | 4.35 |
577 | 587 | 9.931698 | CCCTGTATATTAGTATATACTGACCCA | 57.068 | 37.037 | 23.09 | 11.76 | 44.89 | 4.51 |
578 | 588 | 8.858094 | GCCCTGTATATTAGTATATACTGACCC | 58.142 | 40.741 | 23.09 | 8.38 | 44.89 | 4.46 |
579 | 589 | 8.858094 | GGCCCTGTATATTAGTATATACTGACC | 58.142 | 40.741 | 23.09 | 7.36 | 44.89 | 4.02 |
580 | 590 | 9.417561 | TGGCCCTGTATATTAGTATATACTGAC | 57.582 | 37.037 | 23.09 | 13.54 | 44.89 | 3.51 |
607 | 617 | 9.912634 | CAGAAAAATGGGTCGCAAATATAATAT | 57.087 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
643 | 653 | 8.793592 | GGAATTTAAGAATGTTACCACTGAACT | 58.206 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
644 | 654 | 8.027189 | GGGAATTTAAGAATGTTACCACTGAAC | 58.973 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
645 | 655 | 7.726291 | TGGGAATTTAAGAATGTTACCACTGAA | 59.274 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
646 | 656 | 7.235079 | TGGGAATTTAAGAATGTTACCACTGA | 58.765 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
647 | 657 | 7.461182 | TGGGAATTTAAGAATGTTACCACTG | 57.539 | 36.000 | 0.00 | 0.00 | 0.00 | 3.66 |
672 | 682 | 0.106918 | TCAGGGAAAACAACACCGCT | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
674 | 684 | 0.306533 | CGTCAGGGAAAACAACACCG | 59.693 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
675 | 685 | 0.030235 | GCGTCAGGGAAAACAACACC | 59.970 | 55.000 | 0.00 | 0.00 | 0.00 | 4.16 |
693 | 705 | 3.008330 | CAAGATATATGAGGCAGGCAGC | 58.992 | 50.000 | 0.00 | 0.00 | 44.65 | 5.25 |
731 | 743 | 5.005628 | AGCCCCTTCATTAACCAAGTTTA | 57.994 | 39.130 | 0.00 | 0.00 | 0.00 | 2.01 |
888 | 931 | 1.808945 | GCAGAGGTCAACTGGTCATTG | 59.191 | 52.381 | 0.00 | 0.00 | 36.09 | 2.82 |
896 | 939 | 1.002544 | GCTAACTGGCAGAGGTCAACT | 59.997 | 52.381 | 23.66 | 0.00 | 0.00 | 3.16 |
909 | 952 | 7.335422 | AGGATAGTGTTCTCAAAATGCTAACTG | 59.665 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
927 | 970 | 2.898729 | ACTTGATCGGCAGGATAGTG | 57.101 | 50.000 | 0.00 | 0.00 | 34.82 | 2.74 |
937 | 980 | 4.509600 | GGCATAAGAGAAGAACTTGATCGG | 59.490 | 45.833 | 0.00 | 0.00 | 0.00 | 4.18 |
938 | 981 | 4.509600 | GGGCATAAGAGAAGAACTTGATCG | 59.490 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
948 | 991 | 5.826737 | ACTGATCAATTGGGCATAAGAGAAG | 59.173 | 40.000 | 5.42 | 0.00 | 0.00 | 2.85 |
959 | 1002 | 3.693085 | CCAGTGAGAACTGATCAATTGGG | 59.307 | 47.826 | 5.42 | 0.00 | 39.99 | 4.12 |
1001 | 1044 | 0.183492 | ACTTTCTGCACCTTCAGGCA | 59.817 | 50.000 | 0.00 | 0.00 | 39.32 | 4.75 |
1023 | 1066 | 6.726490 | TCCATAAGGAATACAGTGGTAGTC | 57.274 | 41.667 | 0.00 | 0.00 | 42.23 | 2.59 |
1075 | 1118 | 6.828785 | AGTTACCTTTGAGTGTGATCAAAAGT | 59.171 | 34.615 | 13.25 | 8.13 | 45.80 | 2.66 |
1076 | 1119 | 7.264373 | AGTTACCTTTGAGTGTGATCAAAAG | 57.736 | 36.000 | 0.00 | 3.33 | 45.80 | 2.27 |
1118 | 1161 | 5.395682 | AAACATGTGCAGATGCTAAATGT | 57.604 | 34.783 | 22.79 | 9.84 | 42.66 | 2.71 |
1144 | 1187 | 8.094548 | AGGTTCAAATTTATTTTCACTTAGCCC | 58.905 | 33.333 | 0.00 | 0.00 | 0.00 | 5.19 |
1158 | 1201 | 9.349713 | AGTGTATCACAGAAAGGTTCAAATTTA | 57.650 | 29.630 | 2.80 | 0.00 | 36.74 | 1.40 |
1239 | 1283 | 6.384224 | TCAACTTCTTTCATCATGATTGCAC | 58.616 | 36.000 | 5.16 | 0.00 | 0.00 | 4.57 |
1248 | 1292 | 9.793259 | AAGTATTTACCTCAACTTCTTTCATCA | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
1272 | 1323 | 7.621428 | TTCTATTGAGAAAGCTGAATGGAAG | 57.379 | 36.000 | 0.00 | 0.00 | 39.16 | 3.46 |
1275 | 1326 | 6.736123 | CCATTCTATTGAGAAAGCTGAATGG | 58.264 | 40.000 | 17.30 | 17.30 | 46.79 | 3.16 |
1302 | 1356 | 1.614903 | CAAATGCAAGGCAGGAGAACA | 59.385 | 47.619 | 0.00 | 0.00 | 43.65 | 3.18 |
1341 | 1395 | 1.336755 | GAACAACAGCGAACCACCAAT | 59.663 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1345 | 1399 | 3.825812 | CTGAACAACAGCGAACCAC | 57.174 | 52.632 | 0.00 | 0.00 | 39.86 | 4.16 |
1388 | 1442 | 9.800433 | GTAGAACCTGATAGTAAAAGGTAAGAC | 57.200 | 37.037 | 7.40 | 3.56 | 43.62 | 3.01 |
1403 | 1457 | 3.964031 | GTCTCCCTGATGTAGAACCTGAT | 59.036 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
1412 | 1466 | 3.197766 | GTCCACATTGTCTCCCTGATGTA | 59.802 | 47.826 | 0.00 | 0.00 | 31.92 | 2.29 |
1427 | 1481 | 4.718961 | ACTAAAAAGAGCACAGTCCACAT | 58.281 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
1428 | 1482 | 4.150897 | ACTAAAAAGAGCACAGTCCACA | 57.849 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
1496 | 1552 | 6.916360 | AAACCTGAATAATTTCTTCCAGCA | 57.084 | 33.333 | 0.00 | 0.00 | 32.78 | 4.41 |
1498 | 1554 | 8.579863 | AGACAAAACCTGAATAATTTCTTCCAG | 58.420 | 33.333 | 0.00 | 0.00 | 32.78 | 3.86 |
1533 | 1589 | 7.786464 | AGAACATATTTCTATGGGCCAGAAAAT | 59.214 | 33.333 | 20.69 | 20.59 | 43.30 | 1.82 |
1558 | 1614 | 6.264518 | ACTGGGTTGTGGTTTGTAAAGAATAG | 59.735 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
1627 | 1833 | 0.764369 | ACACCAAGGGCACTCTCTCA | 60.764 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
1681 | 1887 | 2.420022 | GCTGCAAACAAGGATATCGTGT | 59.580 | 45.455 | 0.00 | 1.88 | 39.70 | 4.49 |
1724 | 1930 | 8.499288 | AAACATAAGGGGAAACAAGGAAAATA | 57.501 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
1741 | 1947 | 4.878397 | AGAAAGGGCGATCTGAAACATAAG | 59.122 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
1746 | 1952 | 4.000988 | TGTTAGAAAGGGCGATCTGAAAC | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 2.78 |
1815 | 2164 | 6.942532 | AGCAGACATTTAAAAGTGAGAACA | 57.057 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
1838 | 2198 | 2.756207 | TGGAGTACGATTCGATGGTCAA | 59.244 | 45.455 | 13.95 | 0.00 | 0.00 | 3.18 |
1849 | 2209 | 8.127150 | TGATAGATGAATTGATGGAGTACGAT | 57.873 | 34.615 | 0.00 | 0.00 | 0.00 | 3.73 |
1906 | 2266 | 6.038382 | TGTTTCTTTTGCCGTTATCAGTTACA | 59.962 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
1907 | 2267 | 6.432107 | TGTTTCTTTTGCCGTTATCAGTTAC | 58.568 | 36.000 | 0.00 | 0.00 | 0.00 | 2.50 |
1908 | 2268 | 6.621316 | TGTTTCTTTTGCCGTTATCAGTTA | 57.379 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
1909 | 2269 | 5.508200 | TGTTTCTTTTGCCGTTATCAGTT | 57.492 | 34.783 | 0.00 | 0.00 | 0.00 | 3.16 |
1910 | 2270 | 4.556699 | GCTGTTTCTTTTGCCGTTATCAGT | 60.557 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
1911 | 2271 | 3.914364 | GCTGTTTCTTTTGCCGTTATCAG | 59.086 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
1913 | 2273 | 3.896122 | TGCTGTTTCTTTTGCCGTTATC | 58.104 | 40.909 | 0.00 | 0.00 | 0.00 | 1.75 |
1914 | 2274 | 4.314740 | TTGCTGTTTCTTTTGCCGTTAT | 57.685 | 36.364 | 0.00 | 0.00 | 0.00 | 1.89 |
1915 | 2275 | 3.784701 | TTGCTGTTTCTTTTGCCGTTA | 57.215 | 38.095 | 0.00 | 0.00 | 0.00 | 3.18 |
1916 | 2276 | 2.663826 | TTGCTGTTTCTTTTGCCGTT | 57.336 | 40.000 | 0.00 | 0.00 | 0.00 | 4.44 |
1918 | 2278 | 2.670414 | TGTTTTGCTGTTTCTTTTGCCG | 59.330 | 40.909 | 0.00 | 0.00 | 0.00 | 5.69 |
1920 | 2280 | 5.220557 | ACATGTTTTGCTGTTTCTTTTGC | 57.779 | 34.783 | 0.00 | 0.00 | 0.00 | 3.68 |
1923 | 2283 | 9.762933 | ATATGTAACATGTTTTGCTGTTTCTTT | 57.237 | 25.926 | 17.78 | 0.00 | 36.92 | 2.52 |
2037 | 2532 | 7.366513 | GCCTCTCAGAAAATTAATAAGGATGC | 58.633 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
2060 | 2555 | 1.752833 | CCCGGTAGGATTGTAGGCC | 59.247 | 63.158 | 0.00 | 0.00 | 41.02 | 5.19 |
2075 | 2570 | 4.153475 | CGATGGGTTAAATTACTATGCCCG | 59.847 | 45.833 | 0.00 | 0.00 | 37.49 | 6.13 |
2119 | 2820 | 7.718525 | ACTTAATACGGTTGTTTGAAAACCAT | 58.281 | 30.769 | 6.19 | 0.00 | 46.24 | 3.55 |
2253 | 2954 | 6.993079 | TGAATAGTAGTGTGTGTGAGAACAT | 58.007 | 36.000 | 0.00 | 0.00 | 31.49 | 2.71 |
2277 | 2978 | 9.218525 | TCAGATCTTCTCATTTTTCCTACCTAT | 57.781 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2279 | 2980 | 7.502060 | TCAGATCTTCTCATTTTTCCTACCT | 57.498 | 36.000 | 0.00 | 0.00 | 0.00 | 3.08 |
2333 | 3447 | 9.313118 | TGTAATACACAGATCATGTAATGACAC | 57.687 | 33.333 | 12.34 | 7.80 | 44.01 | 3.67 |
2350 | 3464 | 7.762615 | TGCCAACAGAATAGTACTGTAATACAC | 59.237 | 37.037 | 5.39 | 0.00 | 46.01 | 2.90 |
2352 | 3466 | 8.888579 | ATGCCAACAGAATAGTACTGTAATAC | 57.111 | 34.615 | 5.39 | 0.00 | 46.01 | 1.89 |
2353 | 3467 | 9.899661 | AAATGCCAACAGAATAGTACTGTAATA | 57.100 | 29.630 | 5.39 | 0.00 | 46.01 | 0.98 |
2354 | 3468 | 8.807948 | AAATGCCAACAGAATAGTACTGTAAT | 57.192 | 30.769 | 5.39 | 0.00 | 46.01 | 1.89 |
2356 | 3470 | 8.315482 | TGTAAATGCCAACAGAATAGTACTGTA | 58.685 | 33.333 | 5.39 | 0.00 | 46.01 | 2.74 |
2358 | 3472 | 7.609760 | TGTAAATGCCAACAGAATAGTACTG | 57.390 | 36.000 | 5.39 | 0.00 | 40.68 | 2.74 |
2359 | 3473 | 8.046708 | TGATGTAAATGCCAACAGAATAGTACT | 58.953 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
2360 | 3474 | 8.208718 | TGATGTAAATGCCAACAGAATAGTAC | 57.791 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
2361 | 3475 | 8.978874 | ATGATGTAAATGCCAACAGAATAGTA | 57.021 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
2362 | 3476 | 7.557358 | TGATGATGTAAATGCCAACAGAATAGT | 59.443 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
2363 | 3477 | 7.859377 | GTGATGATGTAAATGCCAACAGAATAG | 59.141 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
2364 | 3478 | 7.338957 | TGTGATGATGTAAATGCCAACAGAATA | 59.661 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
2365 | 3479 | 6.153170 | TGTGATGATGTAAATGCCAACAGAAT | 59.847 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2402 | 3950 | 3.308438 | TCTGTTCGCTTAACTGGTACC | 57.692 | 47.619 | 4.43 | 4.43 | 38.99 | 3.34 |
2403 | 3951 | 4.091509 | CACATCTGTTCGCTTAACTGGTAC | 59.908 | 45.833 | 6.06 | 0.00 | 38.99 | 3.34 |
2421 | 3969 | 7.273381 | ATACAAAAAGTATTGCTTTCGCACATC | 59.727 | 33.333 | 0.00 | 0.00 | 45.91 | 3.06 |
2459 | 4007 | 7.988028 | CCTTTAGGCTAACTGCTACTAGAAAAT | 59.012 | 37.037 | 6.43 | 0.00 | 42.39 | 1.82 |
2469 | 4017 | 5.045578 | TGAAATCTCCTTTAGGCTAACTGCT | 60.046 | 40.000 | 6.43 | 0.00 | 42.39 | 4.24 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.