Multiple sequence alignment - TraesCS3A01G008400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G008400 chr3A 100.000 2549 0 0 1 2549 8151210 8148662 0.000000e+00 4708.0
1 TraesCS3A01G008400 chr3A 87.205 297 34 4 291 587 8153316 8153608 4.060000e-88 335.0
2 TraesCS3A01G008400 chr3A 90.995 211 14 5 2102 2310 709970242 709970449 1.930000e-71 279.0
3 TraesCS3A01G008400 chr3A 85.306 245 27 4 6 241 8153070 8153314 7.040000e-61 244.0
4 TraesCS3A01G008400 chr3A 87.234 188 24 0 1922 2109 709969856 709970043 5.520000e-52 215.0
5 TraesCS3A01G008400 chr3D 86.994 1384 125 12 940 2310 1135488 1136829 0.000000e+00 1507.0
6 TraesCS3A01G008400 chr3D 86.861 959 82 21 589 1541 1132491 1131571 0.000000e+00 1033.0
7 TraesCS3A01G008400 chr3D 87.047 579 72 3 6 583 1130957 1130381 0.000000e+00 651.0
8 TraesCS3A01G008400 chr3D 84.424 321 25 9 590 896 1135177 1135486 2.480000e-75 292.0
9 TraesCS3A01G008400 chr3D 94.512 164 7 2 2367 2529 1137732 1137894 4.210000e-63 252.0
10 TraesCS3A01G008400 chr3D 95.238 42 0 2 792 833 1135404 1135443 5.890000e-07 65.8
11 TraesCS3A01G008400 chr1D 88.801 634 39 12 1561 2194 460739224 460739825 0.000000e+00 749.0
12 TraesCS3A01G008400 chr7D 88.644 634 40 12 1561 2194 632125898 632126499 0.000000e+00 743.0
13 TraesCS3A01G008400 chr7D 88.328 634 42 12 1561 2194 394262505 394261904 0.000000e+00 732.0
14 TraesCS3A01G008400 chr6D 88.328 634 42 12 1561 2194 466530504 466529903 0.000000e+00 732.0
15 TraesCS3A01G008400 chr6D 87.608 581 65 4 6 583 410167106 410167682 0.000000e+00 667.0
16 TraesCS3A01G008400 chr6D 88.144 194 16 6 2122 2310 451077582 451077391 9.180000e-55 224.0
17 TraesCS3A01G008400 chr7A 88.013 634 45 10 1561 2194 721733073 721732471 0.000000e+00 721.0
18 TraesCS3A01G008400 chr4A 88.013 634 45 9 1561 2194 618092436 618091834 0.000000e+00 721.0
19 TraesCS3A01G008400 chr4A 93.069 101 6 1 2102 2202 684071062 684071161 2.040000e-31 147.0
20 TraesCS3A01G008400 chr7B 87.855 634 46 11 1561 2194 706495824 706496426 0.000000e+00 715.0
21 TraesCS3A01G008400 chr7B 81.238 533 63 22 52 583 727897990 727897494 1.840000e-106 396.0
22 TraesCS3A01G008400 chr7B 80.827 532 66 21 52 583 727924793 727924298 3.980000e-103 385.0
23 TraesCS3A01G008400 chr3B 87.697 634 47 9 1561 2194 393318326 393317724 0.000000e+00 710.0
24 TraesCS3A01G008400 chr3B 93.069 101 6 1 2102 2202 771792141 771792240 2.040000e-31 147.0
25 TraesCS3A01G008400 chr6A 89.785 558 42 6 1561 2118 19305512 19306054 0.000000e+00 701.0
26 TraesCS3A01G008400 chr6A 90.000 530 37 9 1745 2272 60541245 60541760 0.000000e+00 671.0
27 TraesCS3A01G008400 chr6A 85.377 424 50 3 160 580 555663992 555664406 1.810000e-116 429.0
28 TraesCS3A01G008400 chr5A 87.224 634 50 9 1561 2194 104239161 104238559 0.000000e+00 693.0
29 TraesCS3A01G008400 chr2A 87.066 634 51 9 1561 2194 745587139 745587741 0.000000e+00 688.0
30 TraesCS3A01G008400 chr2A 90.047 211 17 4 2102 2310 765959395 765959603 1.160000e-68 270.0
31 TraesCS3A01G008400 chr6B 83.636 385 62 1 6 389 617094537 617094921 6.700000e-96 361.0
32 TraesCS3A01G008400 chr6B 87.402 127 13 2 383 509 617105258 617105381 2.640000e-30 143.0
33 TraesCS3A01G008400 chr4D 90.995 211 15 4 2102 2310 497909561 497909353 5.370000e-72 281.0
34 TraesCS3A01G008400 chr5B 92.000 100 7 1 2103 2202 3915960 3916058 3.420000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G008400 chr3A 8148662 8151210 2548 True 4708.0 4708 100.0000 1 2549 1 chr3A.!!$R1 2548
1 TraesCS3A01G008400 chr3A 8153070 8153608 538 False 289.5 335 86.2555 6 587 2 chr3A.!!$F1 581
2 TraesCS3A01G008400 chr3A 709969856 709970449 593 False 247.0 279 89.1145 1922 2310 2 chr3A.!!$F2 388
3 TraesCS3A01G008400 chr3D 1130381 1132491 2110 True 842.0 1033 86.9540 6 1541 2 chr3D.!!$R1 1535
4 TraesCS3A01G008400 chr3D 1135177 1137894 2717 False 529.2 1507 90.2920 590 2529 4 chr3D.!!$F1 1939
5 TraesCS3A01G008400 chr1D 460739224 460739825 601 False 749.0 749 88.8010 1561 2194 1 chr1D.!!$F1 633
6 TraesCS3A01G008400 chr7D 632125898 632126499 601 False 743.0 743 88.6440 1561 2194 1 chr7D.!!$F1 633
7 TraesCS3A01G008400 chr7D 394261904 394262505 601 True 732.0 732 88.3280 1561 2194 1 chr7D.!!$R1 633
8 TraesCS3A01G008400 chr6D 466529903 466530504 601 True 732.0 732 88.3280 1561 2194 1 chr6D.!!$R2 633
9 TraesCS3A01G008400 chr6D 410167106 410167682 576 False 667.0 667 87.6080 6 583 1 chr6D.!!$F1 577
10 TraesCS3A01G008400 chr7A 721732471 721733073 602 True 721.0 721 88.0130 1561 2194 1 chr7A.!!$R1 633
11 TraesCS3A01G008400 chr4A 618091834 618092436 602 True 721.0 721 88.0130 1561 2194 1 chr4A.!!$R1 633
12 TraesCS3A01G008400 chr7B 706495824 706496426 602 False 715.0 715 87.8550 1561 2194 1 chr7B.!!$F1 633
13 TraesCS3A01G008400 chr3B 393317724 393318326 602 True 710.0 710 87.6970 1561 2194 1 chr3B.!!$R1 633
14 TraesCS3A01G008400 chr6A 19305512 19306054 542 False 701.0 701 89.7850 1561 2118 1 chr6A.!!$F1 557
15 TraesCS3A01G008400 chr6A 60541245 60541760 515 False 671.0 671 90.0000 1745 2272 1 chr6A.!!$F2 527
16 TraesCS3A01G008400 chr5A 104238559 104239161 602 True 693.0 693 87.2240 1561 2194 1 chr5A.!!$R1 633
17 TraesCS3A01G008400 chr2A 745587139 745587741 602 False 688.0 688 87.0660 1561 2194 1 chr2A.!!$F1 633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
693 705 0.306533 CGGTGTTGTTTTCCCTGACG 59.693 55.0 0.0 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1627 1833 0.764369 ACACCAAGGGCACTCTCTCA 60.764 55.0 0.0 0.0 0.0 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 5.473796 TTCACCTAACAACGAGTTGAAAC 57.526 39.130 21.14 0.00 42.93 2.78
34 35 4.569162 CACCTAACAACGAGTTGAAACTGA 59.431 41.667 21.14 0.99 42.93 3.41
39 40 4.451900 ACAACGAGTTGAAACTGAGGAAT 58.548 39.130 21.14 0.00 42.93 3.01
69 70 3.862267 CAGCAGACGATTTAGAAGACCTG 59.138 47.826 0.00 0.00 0.00 4.00
75 76 3.195825 ACGATTTAGAAGACCTGGACCTG 59.804 47.826 0.00 0.00 0.00 4.00
77 78 3.269592 TTTAGAAGACCTGGACCTGGA 57.730 47.619 23.36 0.00 0.00 3.86
91 92 2.264124 CTGGAAGGAGACGACCGAA 58.736 57.895 0.00 0.00 34.13 4.30
109 117 2.557317 GAAACAACAACGGAGGAGACA 58.443 47.619 0.00 0.00 0.00 3.41
115 123 1.760613 ACAACGGAGGAGACAGTTCAA 59.239 47.619 0.00 0.00 0.00 2.69
143 151 2.211250 AGTTCCGCACTCTAGTGGTA 57.789 50.000 11.86 0.00 45.72 3.25
146 154 2.426024 GTTCCGCACTCTAGTGGTATGA 59.574 50.000 11.86 0.00 45.72 2.15
183 191 6.499350 ACTTGGTGTAGAGTTAATAGGGTTGA 59.501 38.462 0.00 0.00 0.00 3.18
189 199 4.833390 AGAGTTAATAGGGTTGAGTGTGC 58.167 43.478 0.00 0.00 0.00 4.57
206 216 1.602605 GCTGTGGTTTTAGCCCCGT 60.603 57.895 0.00 0.00 33.89 5.28
207 217 0.321830 GCTGTGGTTTTAGCCCCGTA 60.322 55.000 0.00 0.00 33.89 4.02
208 218 1.734163 CTGTGGTTTTAGCCCCGTAG 58.266 55.000 0.00 0.00 0.00 3.51
209 219 1.276989 CTGTGGTTTTAGCCCCGTAGA 59.723 52.381 0.00 0.00 0.00 2.59
210 220 1.698532 TGTGGTTTTAGCCCCGTAGAA 59.301 47.619 0.00 0.00 0.00 2.10
211 221 2.289819 TGTGGTTTTAGCCCCGTAGAAG 60.290 50.000 0.00 0.00 0.00 2.85
212 222 2.027837 GTGGTTTTAGCCCCGTAGAAGA 60.028 50.000 0.00 0.00 0.00 2.87
213 223 2.841881 TGGTTTTAGCCCCGTAGAAGAT 59.158 45.455 0.00 0.00 0.00 2.40
214 224 3.264964 TGGTTTTAGCCCCGTAGAAGATT 59.735 43.478 0.00 0.00 0.00 2.40
215 225 4.263594 TGGTTTTAGCCCCGTAGAAGATTT 60.264 41.667 0.00 0.00 0.00 2.17
216 226 4.334759 GGTTTTAGCCCCGTAGAAGATTTC 59.665 45.833 0.00 0.00 0.00 2.17
217 227 3.832615 TTAGCCCCGTAGAAGATTTCC 57.167 47.619 0.00 0.00 0.00 3.13
218 228 1.580059 AGCCCCGTAGAAGATTTCCA 58.420 50.000 0.00 0.00 0.00 3.53
219 229 2.127708 AGCCCCGTAGAAGATTTCCAT 58.872 47.619 0.00 0.00 0.00 3.41
220 230 2.158755 AGCCCCGTAGAAGATTTCCATG 60.159 50.000 0.00 0.00 0.00 3.66
221 231 2.222027 CCCCGTAGAAGATTTCCATGC 58.778 52.381 0.00 0.00 0.00 4.06
222 232 2.158755 CCCCGTAGAAGATTTCCATGCT 60.159 50.000 0.00 0.00 0.00 3.79
223 233 2.874701 CCCGTAGAAGATTTCCATGCTG 59.125 50.000 0.00 0.00 0.00 4.41
224 234 3.535561 CCGTAGAAGATTTCCATGCTGT 58.464 45.455 0.00 0.00 0.00 4.40
225 235 3.941483 CCGTAGAAGATTTCCATGCTGTT 59.059 43.478 0.00 0.00 0.00 3.16
226 236 4.396166 CCGTAGAAGATTTCCATGCTGTTT 59.604 41.667 0.00 0.00 0.00 2.83
227 237 5.106157 CCGTAGAAGATTTCCATGCTGTTTT 60.106 40.000 0.00 0.00 0.00 2.43
228 238 6.024049 CGTAGAAGATTTCCATGCTGTTTTC 58.976 40.000 0.00 0.00 0.00 2.29
229 239 6.348458 CGTAGAAGATTTCCATGCTGTTTTCA 60.348 38.462 0.00 0.00 0.00 2.69
230 240 6.409524 AGAAGATTTCCATGCTGTTTTCAA 57.590 33.333 0.00 0.00 0.00 2.69
231 241 7.001099 AGAAGATTTCCATGCTGTTTTCAAT 57.999 32.000 0.00 0.00 0.00 2.57
232 242 7.447594 AGAAGATTTCCATGCTGTTTTCAATT 58.552 30.769 0.00 0.00 0.00 2.32
233 243 7.601508 AGAAGATTTCCATGCTGTTTTCAATTC 59.398 33.333 0.00 0.00 0.00 2.17
234 244 7.001099 AGATTTCCATGCTGTTTTCAATTCT 57.999 32.000 0.00 0.00 0.00 2.40
235 245 8.125978 AGATTTCCATGCTGTTTTCAATTCTA 57.874 30.769 0.00 0.00 0.00 2.10
236 246 8.755977 AGATTTCCATGCTGTTTTCAATTCTAT 58.244 29.630 0.00 0.00 0.00 1.98
237 247 9.374838 GATTTCCATGCTGTTTTCAATTCTATT 57.625 29.630 0.00 0.00 0.00 1.73
241 251 9.859427 TCCATGCTGTTTTCAATTCTATTAAAG 57.141 29.630 0.00 0.00 0.00 1.85
242 252 8.598075 CCATGCTGTTTTCAATTCTATTAAAGC 58.402 33.333 0.00 0.00 0.00 3.51
243 253 7.795431 TGCTGTTTTCAATTCTATTAAAGCG 57.205 32.000 0.00 0.00 0.00 4.68
244 254 7.367285 TGCTGTTTTCAATTCTATTAAAGCGT 58.633 30.769 0.00 0.00 0.00 5.07
245 255 7.537306 TGCTGTTTTCAATTCTATTAAAGCGTC 59.463 33.333 0.00 0.00 0.00 5.19
246 256 7.008357 GCTGTTTTCAATTCTATTAAAGCGTCC 59.992 37.037 0.00 0.00 0.00 4.79
247 257 7.309920 TGTTTTCAATTCTATTAAAGCGTCCC 58.690 34.615 0.00 0.00 0.00 4.46
248 258 6.445357 TTTCAATTCTATTAAAGCGTCCCC 57.555 37.500 0.00 0.00 0.00 4.81
249 259 5.105567 TCAATTCTATTAAAGCGTCCCCA 57.894 39.130 0.00 0.00 0.00 4.96
250 260 5.502079 TCAATTCTATTAAAGCGTCCCCAA 58.498 37.500 0.00 0.00 0.00 4.12
251 261 5.588648 TCAATTCTATTAAAGCGTCCCCAAG 59.411 40.000 0.00 0.00 0.00 3.61
252 262 4.563140 TTCTATTAAAGCGTCCCCAAGT 57.437 40.909 0.00 0.00 0.00 3.16
253 263 4.563140 TCTATTAAAGCGTCCCCAAGTT 57.437 40.909 0.00 0.00 0.00 2.66
254 264 4.258543 TCTATTAAAGCGTCCCCAAGTTG 58.741 43.478 0.00 0.00 0.00 3.16
255 265 2.351706 TTAAAGCGTCCCCAAGTTGT 57.648 45.000 1.45 0.00 0.00 3.32
256 266 3.488778 TTAAAGCGTCCCCAAGTTGTA 57.511 42.857 1.45 0.00 0.00 2.41
257 267 2.579410 AAAGCGTCCCCAAGTTGTAT 57.421 45.000 1.45 0.00 0.00 2.29
258 268 2.109425 AAGCGTCCCCAAGTTGTATC 57.891 50.000 1.45 0.00 0.00 2.24
259 269 0.981183 AGCGTCCCCAAGTTGTATCA 59.019 50.000 1.45 0.00 0.00 2.15
260 270 1.349688 AGCGTCCCCAAGTTGTATCAA 59.650 47.619 1.45 0.00 0.00 2.57
261 271 2.156098 GCGTCCCCAAGTTGTATCAAA 58.844 47.619 1.45 0.00 0.00 2.69
262 272 2.095415 GCGTCCCCAAGTTGTATCAAAC 60.095 50.000 1.45 0.00 0.00 2.93
263 273 3.142951 CGTCCCCAAGTTGTATCAAACA 58.857 45.455 1.45 0.00 35.88 2.83
264 274 3.756434 CGTCCCCAAGTTGTATCAAACAT 59.244 43.478 1.45 0.00 38.10 2.71
265 275 4.217550 CGTCCCCAAGTTGTATCAAACATT 59.782 41.667 1.45 0.00 38.10 2.71
266 276 5.278758 CGTCCCCAAGTTGTATCAAACATTT 60.279 40.000 1.45 0.00 38.10 2.32
267 277 6.521162 GTCCCCAAGTTGTATCAAACATTTT 58.479 36.000 1.45 0.00 38.10 1.82
268 278 6.989759 GTCCCCAAGTTGTATCAAACATTTTT 59.010 34.615 1.45 0.00 38.10 1.94
305 315 8.931385 ACTTTATATGTACGGTAAATTGTCGT 57.069 30.769 0.00 6.31 40.40 4.34
315 325 7.281991 ACGGTAAATTGTCGTACATCTTTAC 57.718 36.000 15.61 15.61 36.68 2.01
316 326 7.092716 ACGGTAAATTGTCGTACATCTTTACT 58.907 34.615 18.97 9.06 37.09 2.24
317 327 8.243426 ACGGTAAATTGTCGTACATCTTTACTA 58.757 33.333 18.97 0.00 37.09 1.82
318 328 8.526681 CGGTAAATTGTCGTACATCTTTACTAC 58.473 37.037 18.97 11.30 37.09 2.73
319 329 8.811378 GGTAAATTGTCGTACATCTTTACTACC 58.189 37.037 18.97 11.14 37.09 3.18
320 330 9.357652 GTAAATTGTCGTACATCTTTACTACCA 57.642 33.333 16.08 0.00 35.70 3.25
322 332 9.444600 AAATTGTCGTACATCTTTACTACCATT 57.555 29.630 0.00 0.00 0.00 3.16
324 334 8.915871 TTGTCGTACATCTTTACTACCATTAC 57.084 34.615 0.00 0.00 0.00 1.89
325 335 7.483307 TGTCGTACATCTTTACTACCATTACC 58.517 38.462 0.00 0.00 0.00 2.85
326 336 6.920210 GTCGTACATCTTTACTACCATTACCC 59.080 42.308 0.00 0.00 0.00 3.69
327 337 5.916883 CGTACATCTTTACTACCATTACCCG 59.083 44.000 0.00 0.00 0.00 5.28
328 338 4.700700 ACATCTTTACTACCATTACCCGC 58.299 43.478 0.00 0.00 0.00 6.13
329 339 4.162698 ACATCTTTACTACCATTACCCGCA 59.837 41.667 0.00 0.00 0.00 5.69
330 340 5.163237 ACATCTTTACTACCATTACCCGCAT 60.163 40.000 0.00 0.00 0.00 4.73
331 341 5.362105 TCTTTACTACCATTACCCGCATT 57.638 39.130 0.00 0.00 0.00 3.56
332 342 5.120399 TCTTTACTACCATTACCCGCATTG 58.880 41.667 0.00 0.00 0.00 2.82
333 343 1.675552 ACTACCATTACCCGCATTGC 58.324 50.000 0.00 0.00 0.00 3.56
334 344 1.065053 ACTACCATTACCCGCATTGCA 60.065 47.619 9.69 0.00 0.00 4.08
335 345 2.229792 CTACCATTACCCGCATTGCAT 58.770 47.619 9.69 0.00 0.00 3.96
336 346 2.356665 ACCATTACCCGCATTGCATA 57.643 45.000 9.69 0.00 0.00 3.14
337 347 2.875296 ACCATTACCCGCATTGCATAT 58.125 42.857 9.69 0.00 0.00 1.78
338 348 2.819608 ACCATTACCCGCATTGCATATC 59.180 45.455 9.69 0.00 0.00 1.63
339 349 3.084039 CCATTACCCGCATTGCATATCT 58.916 45.455 9.69 0.00 0.00 1.98
340 350 4.260985 CCATTACCCGCATTGCATATCTA 58.739 43.478 9.69 0.00 0.00 1.98
341 351 4.094887 CCATTACCCGCATTGCATATCTAC 59.905 45.833 9.69 0.00 0.00 2.59
342 352 2.928801 ACCCGCATTGCATATCTACA 57.071 45.000 9.69 0.00 0.00 2.74
343 353 3.423539 ACCCGCATTGCATATCTACAT 57.576 42.857 9.69 0.00 0.00 2.29
344 354 4.551702 ACCCGCATTGCATATCTACATA 57.448 40.909 9.69 0.00 0.00 2.29
345 355 5.102953 ACCCGCATTGCATATCTACATAT 57.897 39.130 9.69 0.00 0.00 1.78
346 356 6.233905 ACCCGCATTGCATATCTACATATA 57.766 37.500 9.69 0.00 0.00 0.86
347 357 6.830912 ACCCGCATTGCATATCTACATATAT 58.169 36.000 9.69 0.00 0.00 0.86
348 358 7.282585 ACCCGCATTGCATATCTACATATATT 58.717 34.615 9.69 0.00 0.00 1.28
349 359 7.775093 ACCCGCATTGCATATCTACATATATTT 59.225 33.333 9.69 0.00 0.00 1.40
350 360 8.623903 CCCGCATTGCATATCTACATATATTTT 58.376 33.333 9.69 0.00 0.00 1.82
372 382 8.845413 TTTTTAATTATGCAGTCCATTGCTTT 57.155 26.923 0.00 0.00 44.38 3.51
373 383 8.477984 TTTTAATTATGCAGTCCATTGCTTTC 57.522 30.769 0.00 0.00 44.38 2.62
374 384 5.927281 AATTATGCAGTCCATTGCTTTCT 57.073 34.783 0.00 0.00 44.38 2.52
375 385 8.518430 TTAATTATGCAGTCCATTGCTTTCTA 57.482 30.769 0.00 0.00 44.38 2.10
376 386 5.818136 TTATGCAGTCCATTGCTTTCTAC 57.182 39.130 0.00 0.00 44.38 2.59
377 387 3.138884 TGCAGTCCATTGCTTTCTACA 57.861 42.857 0.00 0.00 44.38 2.74
378 388 2.813754 TGCAGTCCATTGCTTTCTACAC 59.186 45.455 0.00 0.00 44.38 2.90
379 389 2.813754 GCAGTCCATTGCTTTCTACACA 59.186 45.455 0.00 0.00 40.89 3.72
380 390 3.120060 GCAGTCCATTGCTTTCTACACAG 60.120 47.826 0.00 0.00 40.89 3.66
381 391 4.318332 CAGTCCATTGCTTTCTACACAGA 58.682 43.478 0.00 0.00 0.00 3.41
382 392 4.756642 CAGTCCATTGCTTTCTACACAGAA 59.243 41.667 0.00 0.00 39.06 3.02
383 393 5.239306 CAGTCCATTGCTTTCTACACAGAAA 59.761 40.000 0.35 0.35 46.24 2.52
384 394 6.006449 AGTCCATTGCTTTCTACACAGAAAT 58.994 36.000 0.61 0.00 46.95 2.17
385 395 7.119699 CAGTCCATTGCTTTCTACACAGAAATA 59.880 37.037 0.61 0.00 46.95 1.40
386 396 7.665559 AGTCCATTGCTTTCTACACAGAAATAA 59.334 33.333 0.61 1.32 46.95 1.40
387 397 7.965107 GTCCATTGCTTTCTACACAGAAATAAG 59.035 37.037 0.61 0.00 46.95 1.73
388 398 7.665559 TCCATTGCTTTCTACACAGAAATAAGT 59.334 33.333 0.61 0.00 46.95 2.24
389 399 7.965107 CCATTGCTTTCTACACAGAAATAAGTC 59.035 37.037 0.61 0.00 46.95 3.01
390 400 8.725148 CATTGCTTTCTACACAGAAATAAGTCT 58.275 33.333 0.61 0.00 46.95 3.24
391 401 9.944376 ATTGCTTTCTACACAGAAATAAGTCTA 57.056 29.630 0.61 0.00 46.95 2.59
392 402 9.944376 TTGCTTTCTACACAGAAATAAGTCTAT 57.056 29.630 0.61 0.00 46.95 1.98
393 403 9.371136 TGCTTTCTACACAGAAATAAGTCTATG 57.629 33.333 0.61 0.00 46.95 2.23
394 404 9.587772 GCTTTCTACACAGAAATAAGTCTATGA 57.412 33.333 0.61 0.00 46.95 2.15
398 408 9.462606 TCTACACAGAAATAAGTCTATGAGTGA 57.537 33.333 0.00 0.00 0.00 3.41
399 409 9.509855 CTACACAGAAATAAGTCTATGAGTGAC 57.490 37.037 0.00 0.00 34.88 3.67
400 410 7.896811 ACACAGAAATAAGTCTATGAGTGACA 58.103 34.615 0.00 0.00 36.94 3.58
401 411 8.367911 ACACAGAAATAAGTCTATGAGTGACAA 58.632 33.333 0.00 0.00 36.94 3.18
402 412 9.208022 CACAGAAATAAGTCTATGAGTGACAAA 57.792 33.333 0.00 0.00 36.94 2.83
403 413 9.778741 ACAGAAATAAGTCTATGAGTGACAAAA 57.221 29.630 0.00 0.00 36.94 2.44
411 421 8.994429 AGTCTATGAGTGACAAAATCTTGTAG 57.006 34.615 0.00 0.00 45.98 2.74
412 422 8.589338 AGTCTATGAGTGACAAAATCTTGTAGT 58.411 33.333 0.00 0.00 45.98 2.73
413 423 8.865001 GTCTATGAGTGACAAAATCTTGTAGTC 58.135 37.037 0.00 0.00 45.98 2.59
414 424 8.035394 TCTATGAGTGACAAAATCTTGTAGTCC 58.965 37.037 0.00 0.00 45.98 3.85
415 425 6.174720 TGAGTGACAAAATCTTGTAGTCCT 57.825 37.500 0.00 0.00 45.98 3.85
416 426 6.591935 TGAGTGACAAAATCTTGTAGTCCTT 58.408 36.000 0.00 0.00 45.98 3.36
417 427 7.054124 TGAGTGACAAAATCTTGTAGTCCTTT 58.946 34.615 0.00 0.00 45.98 3.11
418 428 7.012327 TGAGTGACAAAATCTTGTAGTCCTTTG 59.988 37.037 0.00 0.00 45.98 2.77
419 429 7.054124 AGTGACAAAATCTTGTAGTCCTTTGA 58.946 34.615 0.00 0.00 45.98 2.69
420 430 7.721399 AGTGACAAAATCTTGTAGTCCTTTGAT 59.279 33.333 0.00 0.00 45.98 2.57
421 431 8.352942 GTGACAAAATCTTGTAGTCCTTTGATT 58.647 33.333 0.00 0.00 45.98 2.57
422 432 8.912988 TGACAAAATCTTGTAGTCCTTTGATTT 58.087 29.630 0.00 0.00 45.98 2.17
423 433 9.399403 GACAAAATCTTGTAGTCCTTTGATTTC 57.601 33.333 0.00 0.00 45.98 2.17
424 434 8.912988 ACAAAATCTTGTAGTCCTTTGATTTCA 58.087 29.630 0.00 0.00 44.14 2.69
425 435 9.918630 CAAAATCTTGTAGTCCTTTGATTTCAT 57.081 29.630 0.00 0.00 34.39 2.57
427 437 9.918630 AAATCTTGTAGTCCTTTGATTTCATTG 57.081 29.630 0.00 0.00 31.16 2.82
428 438 8.641498 ATCTTGTAGTCCTTTGATTTCATTGT 57.359 30.769 0.00 0.00 0.00 2.71
429 439 8.463930 TCTTGTAGTCCTTTGATTTCATTGTT 57.536 30.769 0.00 0.00 0.00 2.83
430 440 8.912988 TCTTGTAGTCCTTTGATTTCATTGTTT 58.087 29.630 0.00 0.00 0.00 2.83
432 442 9.959749 TTGTAGTCCTTTGATTTCATTGTTTAC 57.040 29.630 0.00 0.00 0.00 2.01
433 443 9.126151 TGTAGTCCTTTGATTTCATTGTTTACA 57.874 29.630 0.00 0.00 0.00 2.41
434 444 9.959749 GTAGTCCTTTGATTTCATTGTTTACAA 57.040 29.630 0.00 0.00 40.51 2.41
436 446 8.695456 AGTCCTTTGATTTCATTGTTTACAAGT 58.305 29.630 1.50 0.00 39.47 3.16
437 447 8.755018 GTCCTTTGATTTCATTGTTTACAAGTG 58.245 33.333 1.50 1.34 39.47 3.16
438 448 8.690884 TCCTTTGATTTCATTGTTTACAAGTGA 58.309 29.630 1.50 3.39 39.47 3.41
439 449 9.480053 CCTTTGATTTCATTGTTTACAAGTGAT 57.520 29.630 1.50 0.00 39.47 3.06
441 451 7.872163 TGATTTCATTGTTTACAAGTGATGC 57.128 32.000 1.50 0.00 39.47 3.91
442 452 7.432059 TGATTTCATTGTTTACAAGTGATGCA 58.568 30.769 1.50 0.00 39.47 3.96
443 453 7.595875 TGATTTCATTGTTTACAAGTGATGCAG 59.404 33.333 0.00 0.00 39.47 4.41
444 454 5.375417 TCATTGTTTACAAGTGATGCAGG 57.625 39.130 0.00 0.00 39.47 4.85
445 455 4.218200 TCATTGTTTACAAGTGATGCAGGG 59.782 41.667 0.00 0.00 39.47 4.45
446 456 2.513753 TGTTTACAAGTGATGCAGGGG 58.486 47.619 0.00 0.00 0.00 4.79
447 457 2.158534 TGTTTACAAGTGATGCAGGGGT 60.159 45.455 0.00 0.00 0.00 4.95
448 458 2.890945 GTTTACAAGTGATGCAGGGGTT 59.109 45.455 0.00 0.00 0.00 4.11
449 459 2.198827 TACAAGTGATGCAGGGGTTG 57.801 50.000 0.00 0.00 0.00 3.77
458 468 3.860681 CAGGGGTTGCTTTGCACT 58.139 55.556 0.00 0.00 38.71 4.40
459 469 2.126951 CAGGGGTTGCTTTGCACTT 58.873 52.632 0.00 0.00 38.71 3.16
460 470 0.465287 CAGGGGTTGCTTTGCACTTT 59.535 50.000 0.00 0.00 38.71 2.66
461 471 1.134431 CAGGGGTTGCTTTGCACTTTT 60.134 47.619 0.00 0.00 38.71 2.27
462 472 1.138859 AGGGGTTGCTTTGCACTTTTC 59.861 47.619 0.00 0.00 38.71 2.29
463 473 1.138859 GGGGTTGCTTTGCACTTTTCT 59.861 47.619 0.00 0.00 38.71 2.52
464 474 2.419990 GGGGTTGCTTTGCACTTTTCTT 60.420 45.455 0.00 0.00 38.71 2.52
465 475 3.181470 GGGGTTGCTTTGCACTTTTCTTA 60.181 43.478 0.00 0.00 38.71 2.10
466 476 4.503123 GGGGTTGCTTTGCACTTTTCTTAT 60.503 41.667 0.00 0.00 38.71 1.73
467 477 5.056480 GGGTTGCTTTGCACTTTTCTTATT 58.944 37.500 0.00 0.00 38.71 1.40
468 478 5.527214 GGGTTGCTTTGCACTTTTCTTATTT 59.473 36.000 0.00 0.00 38.71 1.40
469 479 6.292865 GGGTTGCTTTGCACTTTTCTTATTTC 60.293 38.462 0.00 0.00 38.71 2.17
470 480 6.257630 GGTTGCTTTGCACTTTTCTTATTTCA 59.742 34.615 0.00 0.00 38.71 2.69
471 481 7.041848 GGTTGCTTTGCACTTTTCTTATTTCAT 60.042 33.333 0.00 0.00 38.71 2.57
472 482 7.410800 TGCTTTGCACTTTTCTTATTTCATG 57.589 32.000 0.00 0.00 31.71 3.07
473 483 6.424509 TGCTTTGCACTTTTCTTATTTCATGG 59.575 34.615 0.00 0.00 31.71 3.66
474 484 6.646240 GCTTTGCACTTTTCTTATTTCATGGA 59.354 34.615 0.00 0.00 0.00 3.41
475 485 7.332678 GCTTTGCACTTTTCTTATTTCATGGAT 59.667 33.333 0.00 0.00 0.00 3.41
476 486 8.537049 TTTGCACTTTTCTTATTTCATGGATG 57.463 30.769 0.00 0.00 0.00 3.51
477 487 6.101332 TGCACTTTTCTTATTTCATGGATGC 58.899 36.000 0.00 0.00 0.00 3.91
478 488 6.071221 TGCACTTTTCTTATTTCATGGATGCT 60.071 34.615 0.00 0.00 0.00 3.79
479 489 7.122501 TGCACTTTTCTTATTTCATGGATGCTA 59.877 33.333 0.00 0.00 0.00 3.49
480 490 7.433425 GCACTTTTCTTATTTCATGGATGCTAC 59.567 37.037 0.00 0.00 0.00 3.58
481 491 7.917505 CACTTTTCTTATTTCATGGATGCTACC 59.082 37.037 0.00 0.00 0.00 3.18
482 492 7.836183 ACTTTTCTTATTTCATGGATGCTACCT 59.164 33.333 0.00 0.00 0.00 3.08
483 493 7.807977 TTTCTTATTTCATGGATGCTACCTC 57.192 36.000 0.00 0.00 0.00 3.85
484 494 6.753913 TCTTATTTCATGGATGCTACCTCT 57.246 37.500 0.00 0.00 0.00 3.69
485 495 7.855784 TCTTATTTCATGGATGCTACCTCTA 57.144 36.000 0.00 0.00 0.00 2.43
486 496 7.671302 TCTTATTTCATGGATGCTACCTCTAC 58.329 38.462 0.00 0.00 0.00 2.59
487 497 7.510685 TCTTATTTCATGGATGCTACCTCTACT 59.489 37.037 0.00 0.00 0.00 2.57
488 498 5.957771 TTTCATGGATGCTACCTCTACTT 57.042 39.130 0.00 0.00 0.00 2.24
489 499 5.957771 TTCATGGATGCTACCTCTACTTT 57.042 39.130 0.00 0.00 0.00 2.66
490 500 5.537300 TCATGGATGCTACCTCTACTTTC 57.463 43.478 0.00 0.00 0.00 2.62
491 501 4.038042 TCATGGATGCTACCTCTACTTTCG 59.962 45.833 0.00 0.00 0.00 3.46
492 502 3.628008 TGGATGCTACCTCTACTTTCGA 58.372 45.455 0.00 0.00 0.00 3.71
493 503 4.021229 TGGATGCTACCTCTACTTTCGAA 58.979 43.478 0.00 0.00 0.00 3.71
494 504 4.464951 TGGATGCTACCTCTACTTTCGAAA 59.535 41.667 10.71 10.71 0.00 3.46
495 505 5.044558 GGATGCTACCTCTACTTTCGAAAG 58.955 45.833 31.29 31.29 41.73 2.62
496 506 5.163540 GGATGCTACCTCTACTTTCGAAAGA 60.164 44.000 37.54 22.27 39.31 2.52
528 538 8.866970 TTTTCTATACCTATTTCCGTTTGGTT 57.133 30.769 0.00 0.00 36.30 3.67
529 539 8.866970 TTTCTATACCTATTTCCGTTTGGTTT 57.133 30.769 0.00 0.00 36.30 3.27
530 540 9.956640 TTTCTATACCTATTTCCGTTTGGTTTA 57.043 29.630 0.00 0.00 36.30 2.01
531 541 9.956640 TTCTATACCTATTTCCGTTTGGTTTAA 57.043 29.630 0.00 0.00 36.30 1.52
535 545 7.075674 ACCTATTTCCGTTTGGTTTAATACG 57.924 36.000 0.00 0.00 36.30 3.06
540 550 3.812656 CCGTTTGGTTTAATACGGTGTG 58.187 45.455 0.00 0.00 46.25 3.82
541 551 3.227948 CGTTTGGTTTAATACGGTGTGC 58.772 45.455 0.00 0.00 0.00 4.57
542 552 3.058777 CGTTTGGTTTAATACGGTGTGCT 60.059 43.478 0.00 0.00 0.00 4.40
543 553 4.555116 CGTTTGGTTTAATACGGTGTGCTT 60.555 41.667 0.00 0.00 0.00 3.91
544 554 4.752661 TTGGTTTAATACGGTGTGCTTC 57.247 40.909 0.00 0.00 0.00 3.86
545 555 3.741249 TGGTTTAATACGGTGTGCTTCA 58.259 40.909 0.00 0.00 0.00 3.02
546 556 4.135306 TGGTTTAATACGGTGTGCTTCAA 58.865 39.130 0.00 0.00 0.00 2.69
547 557 4.579340 TGGTTTAATACGGTGTGCTTCAAA 59.421 37.500 0.00 0.00 0.00 2.69
548 558 5.067413 TGGTTTAATACGGTGTGCTTCAAAA 59.933 36.000 0.00 0.00 0.00 2.44
549 559 5.978322 GGTTTAATACGGTGTGCTTCAAAAA 59.022 36.000 0.00 0.00 0.00 1.94
575 585 9.740710 AATGAAGTTTCTAAGTGGCTTTATACT 57.259 29.630 0.00 0.00 0.00 2.12
576 586 9.740710 ATGAAGTTTCTAAGTGGCTTTATACTT 57.259 29.630 0.00 0.00 40.09 2.24
577 587 9.569122 TGAAGTTTCTAAGTGGCTTTATACTTT 57.431 29.630 0.00 0.00 38.11 2.66
578 588 9.827411 GAAGTTTCTAAGTGGCTTTATACTTTG 57.173 33.333 0.00 0.00 38.11 2.77
579 589 8.336801 AGTTTCTAAGTGGCTTTATACTTTGG 57.663 34.615 0.00 0.00 38.11 3.28
580 590 7.393515 AGTTTCTAAGTGGCTTTATACTTTGGG 59.606 37.037 0.00 0.00 38.11 4.12
581 591 6.382919 TCTAAGTGGCTTTATACTTTGGGT 57.617 37.500 0.00 0.00 38.11 4.51
582 592 6.412214 TCTAAGTGGCTTTATACTTTGGGTC 58.588 40.000 0.00 0.00 38.11 4.46
583 593 4.650972 AGTGGCTTTATACTTTGGGTCA 57.349 40.909 0.00 0.00 0.00 4.02
584 594 4.589908 AGTGGCTTTATACTTTGGGTCAG 58.410 43.478 0.00 0.00 0.00 3.51
585 595 4.042934 AGTGGCTTTATACTTTGGGTCAGT 59.957 41.667 0.00 0.00 0.00 3.41
586 596 5.249852 AGTGGCTTTATACTTTGGGTCAGTA 59.750 40.000 0.00 0.00 0.00 2.74
587 597 6.069615 AGTGGCTTTATACTTTGGGTCAGTAT 60.070 38.462 0.00 0.00 40.07 2.12
588 598 7.126726 AGTGGCTTTATACTTTGGGTCAGTATA 59.873 37.037 0.00 0.00 38.26 1.47
635 645 1.988293 TTGCGACCCATTTTTCTGGA 58.012 45.000 0.00 0.00 38.69 3.86
674 684 6.930731 TGGTAACATTCTTAAATTCCCAAGC 58.069 36.000 0.00 0.00 46.17 4.01
675 685 6.033966 GGTAACATTCTTAAATTCCCAAGCG 58.966 40.000 0.00 0.00 0.00 4.68
693 705 0.306533 CGGTGTTGTTTTCCCTGACG 59.693 55.000 0.00 0.00 0.00 4.35
731 743 2.158813 TCTTGGTTTCTTCCGAAGCAGT 60.159 45.455 3.00 0.00 32.64 4.40
751 763 5.336451 GCAGTAAACTTGGTTAATGAAGGGG 60.336 44.000 9.62 0.00 32.18 4.79
761 773 0.693049 AATGAAGGGGCTTGACGACT 59.307 50.000 0.00 0.00 0.00 4.18
774 786 5.452077 GGCTTGACGACTGAGGTCTAAATAT 60.452 44.000 0.00 0.00 40.10 1.28
832 875 7.575414 TGGCAAGTGAGTATTTTGTTAAGAA 57.425 32.000 0.00 0.00 0.00 2.52
833 876 7.648142 TGGCAAGTGAGTATTTTGTTAAGAAG 58.352 34.615 0.00 0.00 0.00 2.85
834 877 7.284489 TGGCAAGTGAGTATTTTGTTAAGAAGT 59.716 33.333 0.00 0.00 0.00 3.01
835 878 7.591426 GGCAAGTGAGTATTTTGTTAAGAAGTG 59.409 37.037 0.00 0.00 0.00 3.16
836 879 8.342634 GCAAGTGAGTATTTTGTTAAGAAGTGA 58.657 33.333 0.00 0.00 0.00 3.41
837 880 9.869844 CAAGTGAGTATTTTGTTAAGAAGTGAG 57.130 33.333 0.00 0.00 0.00 3.51
838 881 9.614792 AAGTGAGTATTTTGTTAAGAAGTGAGT 57.385 29.630 0.00 0.00 0.00 3.41
909 952 0.326264 ATGACCAGTTGACCTCTGCC 59.674 55.000 0.00 0.00 0.00 4.85
927 970 4.216257 TCTGCCAGTTAGCATTTTGAGAAC 59.784 41.667 0.00 0.00 43.09 3.01
937 980 4.397417 AGCATTTTGAGAACACTATCCTGC 59.603 41.667 0.00 0.00 0.00 4.85
938 981 4.439289 GCATTTTGAGAACACTATCCTGCC 60.439 45.833 0.00 0.00 0.00 4.85
948 991 3.126831 CACTATCCTGCCGATCAAGTTC 58.873 50.000 0.00 0.00 31.92 3.01
959 1002 4.025313 GCCGATCAAGTTCTTCTCTTATGC 60.025 45.833 0.00 0.00 0.00 3.14
1001 1044 1.352352 GAGCCTGGCCACCATATACAT 59.648 52.381 16.57 0.00 30.82 2.29
1023 1066 2.149578 CCTGAAGGTGCAGAAAGTGAG 58.850 52.381 0.00 0.00 38.14 3.51
1032 1075 2.965831 TGCAGAAAGTGAGACTACCACT 59.034 45.455 0.00 0.00 45.88 4.00
1062 1105 6.608405 TCCTTATGGATTCACTGAATTTGCAT 59.392 34.615 5.73 5.39 37.46 3.96
1075 1118 6.071221 ACTGAATTTGCATGATCCAAAAGCTA 60.071 34.615 0.00 0.00 35.97 3.32
1076 1119 6.101332 TGAATTTGCATGATCCAAAAGCTAC 58.899 36.000 0.00 0.00 35.97 3.58
1118 1161 5.189145 GGTAACTATTCCCAAGAGTCAGGAA 59.811 44.000 10.63 10.63 43.56 3.36
1144 1187 0.711670 GCATCTGCACATGTTTTGCG 59.288 50.000 3.80 0.00 43.34 4.85
1153 1196 1.269448 ACATGTTTTGCGGGCTAAGTG 59.731 47.619 0.00 0.00 0.00 3.16
1158 1201 3.068873 TGTTTTGCGGGCTAAGTGAAAAT 59.931 39.130 0.00 0.00 0.00 1.82
1185 1228 6.618287 TTTGAACCTTTCTGTGATACACTG 57.382 37.500 0.00 0.00 35.11 3.66
1239 1283 4.970711 AGAGAAATGCTGGATATCCACAG 58.029 43.478 20.98 13.11 42.01 3.66
1248 1292 4.395625 CTGGATATCCACAGTGCAATCAT 58.604 43.478 20.98 0.00 42.01 2.45
1272 1323 9.994432 CATGATGAAAGAAGTTGAGGTAAATAC 57.006 33.333 0.00 0.00 0.00 1.89
1302 1356 4.080129 TCAGCTTTCTCAATAGAATGGGCT 60.080 41.667 0.00 0.00 41.36 5.19
1323 1377 1.067354 GTTCTCCTGCCTTGCATTTGG 60.067 52.381 0.00 0.00 38.13 3.28
1353 1407 7.199766 TCAAAATTATATGATTGGTGGTTCGC 58.800 34.615 0.00 0.00 0.00 4.70
1358 1412 0.950836 TGATTGGTGGTTCGCTGTTG 59.049 50.000 0.00 0.00 0.00 3.33
1366 1420 2.088423 TGGTTCGCTGTTGTTCAGTTT 58.912 42.857 0.00 0.00 45.23 2.66
1388 1442 9.052759 AGTTTGATATTGTTATTAGCCTTACGG 57.947 33.333 0.00 0.00 0.00 4.02
1403 1457 5.716703 AGCCTTACGGTCTTACCTTTTACTA 59.283 40.000 0.00 0.00 35.66 1.82
1412 1466 7.363617 CGGTCTTACCTTTTACTATCAGGTTCT 60.364 40.741 0.00 0.00 41.42 3.01
1427 1481 3.515502 CAGGTTCTACATCAGGGAGACAA 59.484 47.826 0.00 0.00 0.00 3.18
1428 1482 4.163078 CAGGTTCTACATCAGGGAGACAAT 59.837 45.833 0.00 0.00 0.00 2.71
1485 1541 8.675705 TTCAGAAAATCATTACACAAGTCAGA 57.324 30.769 0.00 0.00 0.00 3.27
1496 1552 3.577848 ACACAAGTCAGAGATGAGCTTCT 59.422 43.478 0.00 0.00 0.00 2.85
1498 1554 2.931325 CAAGTCAGAGATGAGCTTCTGC 59.069 50.000 8.07 4.46 40.05 4.26
1533 1589 2.703536 TCAGGTTTTGTCTGCTAGACCA 59.296 45.455 11.99 1.22 44.44 4.02
1558 1614 6.959639 TTTCTGGCCCATAGAAATATGTTC 57.040 37.500 11.66 0.00 38.76 3.18
1627 1833 0.839946 AAGAGCAGGACAACCACACT 59.160 50.000 0.00 0.00 38.94 3.55
1680 1886 4.576873 TCGGTTTCATCAAAGTGCTTTACA 59.423 37.500 0.00 0.00 0.00 2.41
1681 1887 5.066634 TCGGTTTCATCAAAGTGCTTTACAA 59.933 36.000 0.00 0.00 0.00 2.41
1724 1930 0.971386 ACAAACGTCCTCCGGTATGT 59.029 50.000 0.00 0.00 42.24 2.29
1741 1947 5.163591 CGGTATGTATTTTCCTTGTTTCCCC 60.164 44.000 0.00 0.00 0.00 4.81
1746 1952 7.475137 TGTATTTTCCTTGTTTCCCCTTATG 57.525 36.000 0.00 0.00 0.00 1.90
1815 2164 4.142513 CCCTAAGTAGAACTCGTACGCTTT 60.143 45.833 11.24 5.59 0.00 3.51
1838 2198 6.942532 TGTTCTCACTTTTAAATGTCTGCT 57.057 33.333 3.86 0.00 0.00 4.24
1849 2209 2.768253 ATGTCTGCTTGACCATCGAA 57.232 45.000 0.00 0.00 44.75 3.71
1861 2221 3.004419 TGACCATCGAATCGTACTCCATC 59.996 47.826 1.52 0.00 0.00 3.51
1906 2266 1.544093 CCAGCCATGCCGTTATCATCT 60.544 52.381 0.00 0.00 0.00 2.90
1907 2267 1.534163 CAGCCATGCCGTTATCATCTG 59.466 52.381 0.00 0.00 0.00 2.90
1908 2268 1.141657 AGCCATGCCGTTATCATCTGT 59.858 47.619 0.00 0.00 0.00 3.41
1909 2269 2.368548 AGCCATGCCGTTATCATCTGTA 59.631 45.455 0.00 0.00 0.00 2.74
1910 2270 3.138304 GCCATGCCGTTATCATCTGTAA 58.862 45.455 0.00 0.00 0.00 2.41
1911 2271 3.058914 GCCATGCCGTTATCATCTGTAAC 60.059 47.826 0.00 0.00 0.00 2.50
1913 2273 4.212004 CCATGCCGTTATCATCTGTAACTG 59.788 45.833 0.00 0.00 31.47 3.16
1914 2274 4.729227 TGCCGTTATCATCTGTAACTGA 57.271 40.909 0.00 0.00 31.47 3.41
1915 2275 5.276461 TGCCGTTATCATCTGTAACTGAT 57.724 39.130 0.00 0.00 36.19 2.90
1916 2276 6.399639 TGCCGTTATCATCTGTAACTGATA 57.600 37.500 0.00 0.00 34.14 2.15
1923 2283 5.079689 TCATCTGTAACTGATAACGGCAA 57.920 39.130 0.00 0.00 0.00 4.52
2037 2532 7.831753 TCTGTAACTGAACTAAGAATCTCTGG 58.168 38.462 0.00 0.00 0.00 3.86
2060 2555 8.455903 TGGCATCCTTATTAATTTTCTGAGAG 57.544 34.615 0.00 0.00 0.00 3.20
2075 2570 2.630580 CTGAGAGGCCTACAATCCTACC 59.369 54.545 4.42 0.00 31.71 3.18
2119 2820 6.859420 TCGTTTTCATGTTCTGAGAAATCA 57.141 33.333 0.00 0.00 34.68 2.57
2167 2868 9.538508 AAGTTCTTGTAAGAAGTAACACGTATT 57.461 29.630 13.45 0.00 45.43 1.89
2239 2940 1.818674 GTACAAACCCTTGGATGCCAG 59.181 52.381 0.00 0.00 36.82 4.85
2253 2954 7.255906 CCTTGGATGCCAGCATAATTTATTGTA 60.256 37.037 4.85 0.00 36.70 2.41
2277 2978 6.399639 TGTTCTCACACACACTACTATTCA 57.600 37.500 0.00 0.00 0.00 2.57
2279 2980 8.117813 TGTTCTCACACACACTACTATTCATA 57.882 34.615 0.00 0.00 0.00 2.15
2302 3003 9.270640 CATAGGTAGGAAAAATGAGAAGATCTG 57.729 37.037 0.00 0.00 0.00 2.90
2306 3007 8.454894 GGTAGGAAAAATGAGAAGATCTGAAAC 58.545 37.037 0.00 0.00 0.00 2.78
2308 3009 7.237255 AGGAAAAATGAGAAGATCTGAAACCT 58.763 34.615 0.00 0.00 0.00 3.50
2309 3010 7.392953 AGGAAAAATGAGAAGATCTGAAACCTC 59.607 37.037 0.00 0.00 0.00 3.85
2350 3464 7.880059 ACGATATGTGTCATTACATGATCTG 57.120 36.000 0.00 0.00 41.18 2.90
2352 3466 7.383300 ACGATATGTGTCATTACATGATCTGTG 59.617 37.037 0.00 3.29 41.18 3.66
2353 3467 7.383300 CGATATGTGTCATTACATGATCTGTGT 59.617 37.037 0.00 8.89 41.18 3.72
2354 3468 9.696917 GATATGTGTCATTACATGATCTGTGTA 57.303 33.333 0.00 7.24 41.18 2.90
2356 3470 8.969260 ATGTGTCATTACATGATCTGTGTATT 57.031 30.769 0.00 6.45 42.04 1.89
2358 3472 9.313118 TGTGTCATTACATGATCTGTGTATTAC 57.687 33.333 0.00 9.95 42.04 1.89
2359 3473 9.313118 GTGTCATTACATGATCTGTGTATTACA 57.687 33.333 0.00 11.61 42.04 2.41
2360 3474 9.533253 TGTCATTACATGATCTGTGTATTACAG 57.467 33.333 0.00 0.75 45.10 2.74
2361 3475 9.534565 GTCATTACATGATCTGTGTATTACAGT 57.465 33.333 0.00 0.00 45.08 3.55
2387 3935 7.934457 ACTATTCTGTTGGCATTTACATCATC 58.066 34.615 0.00 0.00 0.00 2.92
2418 3966 1.612950 TGTCGGTACCAGTTAAGCGAA 59.387 47.619 13.54 0.00 45.85 4.70
2419 3967 1.988467 GTCGGTACCAGTTAAGCGAAC 59.012 52.381 13.54 0.00 45.85 3.95
2420 3968 1.612950 TCGGTACCAGTTAAGCGAACA 59.387 47.619 13.54 0.00 42.04 3.18
2421 3969 1.990563 CGGTACCAGTTAAGCGAACAG 59.009 52.381 13.54 0.00 40.86 3.16
2427 3975 2.159653 CCAGTTAAGCGAACAGATGTGC 60.160 50.000 7.21 0.00 40.86 4.57
2530 4078 2.224646 TGCACCTGTGTTGTTATGCCTA 60.225 45.455 0.00 0.00 32.02 3.93
2531 4079 3.016736 GCACCTGTGTTGTTATGCCTAT 58.983 45.455 0.00 0.00 0.00 2.57
2532 4080 3.443681 GCACCTGTGTTGTTATGCCTATT 59.556 43.478 0.00 0.00 0.00 1.73
2534 4082 5.401550 CACCTGTGTTGTTATGCCTATTTG 58.598 41.667 0.00 0.00 0.00 2.32
2535 4083 5.182950 CACCTGTGTTGTTATGCCTATTTGA 59.817 40.000 0.00 0.00 0.00 2.69
2536 4084 5.951747 ACCTGTGTTGTTATGCCTATTTGAT 59.048 36.000 0.00 0.00 0.00 2.57
2537 4085 6.095440 ACCTGTGTTGTTATGCCTATTTGATC 59.905 38.462 0.00 0.00 0.00 2.92
2538 4086 6.095300 CCTGTGTTGTTATGCCTATTTGATCA 59.905 38.462 0.00 0.00 0.00 2.92
2539 4087 7.362834 CCTGTGTTGTTATGCCTATTTGATCAA 60.363 37.037 3.38 3.38 0.00 2.57
2540 4088 7.537715 TGTGTTGTTATGCCTATTTGATCAAG 58.462 34.615 8.41 0.00 0.00 3.02
2541 4089 7.176515 TGTGTTGTTATGCCTATTTGATCAAGT 59.823 33.333 8.41 8.52 0.00 3.16
2543 4091 7.392953 TGTTGTTATGCCTATTTGATCAAGTCA 59.607 33.333 6.74 0.20 34.25 3.41
2544 4092 7.936496 TGTTATGCCTATTTGATCAAGTCAA 57.064 32.000 6.74 0.00 44.87 3.18
2545 4093 8.523915 TGTTATGCCTATTTGATCAAGTCAAT 57.476 30.769 6.74 1.22 45.77 2.57
2546 4094 8.970020 TGTTATGCCTATTTGATCAAGTCAATT 58.030 29.630 6.74 0.00 45.77 2.32
2547 4095 9.807649 GTTATGCCTATTTGATCAAGTCAATTT 57.192 29.630 6.74 0.00 45.77 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.762187 TCAACTCGTTGTTAGGTGAATTTACA 59.238 34.615 9.38 0.00 37.73 2.41
4 5 7.181143 TCAACTCGTTGTTAGGTGAATTTAC 57.819 36.000 9.38 0.00 37.73 2.01
16 17 3.869065 TCCTCAGTTTCAACTCGTTGTT 58.131 40.909 9.38 0.00 41.16 2.83
31 32 0.529378 GCTGGTTTGGCATTCCTCAG 59.471 55.000 9.30 5.19 0.00 3.35
34 35 0.112995 TCTGCTGGTTTGGCATTCCT 59.887 50.000 9.30 0.00 39.07 3.36
39 40 0.537143 AATCGTCTGCTGGTTTGGCA 60.537 50.000 0.00 0.00 38.10 4.92
69 70 1.605971 GGTCGTCTCCTTCCAGGTCC 61.606 65.000 0.00 0.00 36.53 4.46
75 76 0.316204 TGTTTCGGTCGTCTCCTTCC 59.684 55.000 0.00 0.00 0.00 3.46
77 78 1.137479 TGTTGTTTCGGTCGTCTCCTT 59.863 47.619 0.00 0.00 0.00 3.36
88 89 1.525619 GTCTCCTCCGTTGTTGTTTCG 59.474 52.381 0.00 0.00 0.00 3.46
91 92 1.485066 ACTGTCTCCTCCGTTGTTGTT 59.515 47.619 0.00 0.00 0.00 2.83
101 102 2.814919 TCGTCTCTTGAACTGTCTCCTC 59.185 50.000 0.00 0.00 0.00 3.71
109 117 3.427773 GCGGAACTATCGTCTCTTGAACT 60.428 47.826 0.00 0.00 0.00 3.01
115 123 1.671845 GAGTGCGGAACTATCGTCTCT 59.328 52.381 0.00 0.00 40.07 3.10
135 143 6.150307 AGTCTAGCATCGAATCATACCACTAG 59.850 42.308 0.00 0.00 0.00 2.57
143 151 4.141846 ACACCAAGTCTAGCATCGAATCAT 60.142 41.667 0.00 0.00 0.00 2.45
146 154 3.895232 ACACCAAGTCTAGCATCGAAT 57.105 42.857 0.00 0.00 0.00 3.34
183 191 1.318576 GGCTAAAACCACAGCACACT 58.681 50.000 0.00 0.00 39.63 3.55
189 199 1.276989 TCTACGGGGCTAAAACCACAG 59.723 52.381 0.00 0.00 29.74 3.66
206 216 7.523293 TTGAAAACAGCATGGAAATCTTCTA 57.477 32.000 0.00 0.00 43.62 2.10
207 217 6.409524 TTGAAAACAGCATGGAAATCTTCT 57.590 33.333 0.00 0.00 43.62 2.85
208 218 7.601508 AGAATTGAAAACAGCATGGAAATCTTC 59.398 33.333 0.00 0.00 43.62 2.87
209 219 7.447594 AGAATTGAAAACAGCATGGAAATCTT 58.552 30.769 0.00 0.00 43.62 2.40
210 220 7.001099 AGAATTGAAAACAGCATGGAAATCT 57.999 32.000 0.00 0.00 43.62 2.40
211 221 8.937634 ATAGAATTGAAAACAGCATGGAAATC 57.062 30.769 0.00 0.00 43.62 2.17
215 225 9.859427 CTTTAATAGAATTGAAAACAGCATGGA 57.141 29.630 0.00 0.00 43.62 3.41
216 226 8.598075 GCTTTAATAGAATTGAAAACAGCATGG 58.402 33.333 0.00 0.00 43.62 3.66
217 227 8.316046 CGCTTTAATAGAATTGAAAACAGCATG 58.684 33.333 0.00 0.00 46.00 4.06
218 228 8.028938 ACGCTTTAATAGAATTGAAAACAGCAT 58.971 29.630 0.00 0.00 0.00 3.79
219 229 7.367285 ACGCTTTAATAGAATTGAAAACAGCA 58.633 30.769 0.00 0.00 0.00 4.41
220 230 7.008357 GGACGCTTTAATAGAATTGAAAACAGC 59.992 37.037 0.00 0.00 0.00 4.40
221 231 7.484959 GGGACGCTTTAATAGAATTGAAAACAG 59.515 37.037 0.00 0.00 0.00 3.16
222 232 7.309920 GGGACGCTTTAATAGAATTGAAAACA 58.690 34.615 0.00 0.00 0.00 2.83
223 233 6.750501 GGGGACGCTTTAATAGAATTGAAAAC 59.249 38.462 0.00 0.00 0.00 2.43
224 234 6.434652 TGGGGACGCTTTAATAGAATTGAAAA 59.565 34.615 0.00 0.00 0.00 2.29
225 235 5.946972 TGGGGACGCTTTAATAGAATTGAAA 59.053 36.000 0.00 0.00 0.00 2.69
226 236 5.502079 TGGGGACGCTTTAATAGAATTGAA 58.498 37.500 0.00 0.00 0.00 2.69
227 237 5.105567 TGGGGACGCTTTAATAGAATTGA 57.894 39.130 0.00 0.00 0.00 2.57
228 238 5.357032 ACTTGGGGACGCTTTAATAGAATTG 59.643 40.000 0.00 0.00 0.00 2.32
229 239 5.506708 ACTTGGGGACGCTTTAATAGAATT 58.493 37.500 0.00 0.00 0.00 2.17
230 240 5.112129 ACTTGGGGACGCTTTAATAGAAT 57.888 39.130 0.00 0.00 0.00 2.40
231 241 4.563140 ACTTGGGGACGCTTTAATAGAA 57.437 40.909 0.00 0.00 0.00 2.10
232 242 4.258543 CAACTTGGGGACGCTTTAATAGA 58.741 43.478 0.00 0.00 0.00 1.98
233 243 4.007659 ACAACTTGGGGACGCTTTAATAG 58.992 43.478 0.00 0.00 0.00 1.73
234 244 4.023726 ACAACTTGGGGACGCTTTAATA 57.976 40.909 0.00 0.00 0.00 0.98
235 245 2.871453 ACAACTTGGGGACGCTTTAAT 58.129 42.857 0.00 0.00 0.00 1.40
236 246 2.351706 ACAACTTGGGGACGCTTTAA 57.648 45.000 0.00 0.00 0.00 1.52
237 247 3.008157 TGATACAACTTGGGGACGCTTTA 59.992 43.478 0.00 0.00 0.00 1.85
238 248 2.224670 TGATACAACTTGGGGACGCTTT 60.225 45.455 0.00 0.00 0.00 3.51
239 249 1.349688 TGATACAACTTGGGGACGCTT 59.650 47.619 0.00 0.00 0.00 4.68
240 250 0.981183 TGATACAACTTGGGGACGCT 59.019 50.000 0.00 0.00 0.00 5.07
241 251 1.816074 TTGATACAACTTGGGGACGC 58.184 50.000 0.00 0.00 0.00 5.19
242 252 3.142951 TGTTTGATACAACTTGGGGACG 58.857 45.455 0.00 0.00 32.64 4.79
243 253 5.722021 AATGTTTGATACAACTTGGGGAC 57.278 39.130 0.00 0.00 40.89 4.46
244 254 6.739331 AAAATGTTTGATACAACTTGGGGA 57.261 33.333 0.00 0.00 40.89 4.81
280 290 8.931385 ACGACAATTTACCGTACATATAAAGT 57.069 30.769 0.00 0.00 34.52 2.66
290 300 8.243426 AGTAAAGATGTACGACAATTTACCGTA 58.757 33.333 20.24 0.00 40.91 4.02
291 301 7.092716 AGTAAAGATGTACGACAATTTACCGT 58.907 34.615 20.24 0.00 40.91 4.83
292 302 7.515957 AGTAAAGATGTACGACAATTTACCG 57.484 36.000 20.24 0.00 40.91 4.02
293 303 8.811378 GGTAGTAAAGATGTACGACAATTTACC 58.189 37.037 20.24 13.03 40.91 2.85
294 304 9.357652 TGGTAGTAAAGATGTACGACAATTTAC 57.642 33.333 18.48 18.48 40.64 2.01
296 306 9.444600 AATGGTAGTAAAGATGTACGACAATTT 57.555 29.630 0.00 0.00 32.44 1.82
298 308 9.525409 GTAATGGTAGTAAAGATGTACGACAAT 57.475 33.333 0.00 0.00 32.90 2.71
299 309 7.975616 GGTAATGGTAGTAAAGATGTACGACAA 59.024 37.037 0.00 0.00 32.90 3.18
300 310 7.416664 GGGTAATGGTAGTAAAGATGTACGACA 60.417 40.741 0.00 0.00 32.90 4.35
301 311 6.920210 GGGTAATGGTAGTAAAGATGTACGAC 59.080 42.308 0.00 0.00 0.00 4.34
302 312 6.238731 CGGGTAATGGTAGTAAAGATGTACGA 60.239 42.308 0.00 0.00 0.00 3.43
303 313 5.916883 CGGGTAATGGTAGTAAAGATGTACG 59.083 44.000 0.00 0.00 0.00 3.67
304 314 5.693555 GCGGGTAATGGTAGTAAAGATGTAC 59.306 44.000 0.00 0.00 0.00 2.90
305 315 5.363292 TGCGGGTAATGGTAGTAAAGATGTA 59.637 40.000 0.00 0.00 0.00 2.29
306 316 4.162698 TGCGGGTAATGGTAGTAAAGATGT 59.837 41.667 0.00 0.00 0.00 3.06
307 317 4.699637 TGCGGGTAATGGTAGTAAAGATG 58.300 43.478 0.00 0.00 0.00 2.90
308 318 5.562298 ATGCGGGTAATGGTAGTAAAGAT 57.438 39.130 0.00 0.00 0.00 2.40
309 319 5.120399 CAATGCGGGTAATGGTAGTAAAGA 58.880 41.667 0.00 0.00 0.00 2.52
310 320 4.261031 GCAATGCGGGTAATGGTAGTAAAG 60.261 45.833 0.00 0.00 0.00 1.85
311 321 3.628487 GCAATGCGGGTAATGGTAGTAAA 59.372 43.478 0.00 0.00 0.00 2.01
312 322 3.207778 GCAATGCGGGTAATGGTAGTAA 58.792 45.455 0.00 0.00 0.00 2.24
313 323 2.170817 TGCAATGCGGGTAATGGTAGTA 59.829 45.455 0.00 0.00 0.00 1.82
314 324 1.065053 TGCAATGCGGGTAATGGTAGT 60.065 47.619 0.00 0.00 0.00 2.73
315 325 1.674359 TGCAATGCGGGTAATGGTAG 58.326 50.000 0.00 0.00 0.00 3.18
316 326 2.356665 ATGCAATGCGGGTAATGGTA 57.643 45.000 0.00 0.00 0.00 3.25
317 327 2.356665 TATGCAATGCGGGTAATGGT 57.643 45.000 0.00 0.00 0.00 3.55
318 328 3.084039 AGATATGCAATGCGGGTAATGG 58.916 45.455 0.00 0.00 0.00 3.16
319 329 4.694982 TGTAGATATGCAATGCGGGTAATG 59.305 41.667 0.00 0.00 0.00 1.90
320 330 4.905429 TGTAGATATGCAATGCGGGTAAT 58.095 39.130 0.00 0.00 0.00 1.89
321 331 4.344359 TGTAGATATGCAATGCGGGTAA 57.656 40.909 0.00 0.00 0.00 2.85
322 332 4.551702 ATGTAGATATGCAATGCGGGTA 57.448 40.909 0.00 0.00 0.00 3.69
323 333 2.928801 TGTAGATATGCAATGCGGGT 57.071 45.000 0.00 0.00 0.00 5.28
324 334 7.734924 AATATATGTAGATATGCAATGCGGG 57.265 36.000 0.00 0.00 0.00 6.13
346 356 9.452287 AAAGCAATGGACTGCATAATTAAAAAT 57.548 25.926 0.00 0.00 45.18 1.82
347 357 8.845413 AAAGCAATGGACTGCATAATTAAAAA 57.155 26.923 0.00 0.00 45.18 1.94
348 358 8.313292 AGAAAGCAATGGACTGCATAATTAAAA 58.687 29.630 0.00 0.00 45.18 1.52
349 359 7.839907 AGAAAGCAATGGACTGCATAATTAAA 58.160 30.769 0.00 0.00 45.18 1.52
350 360 7.408756 AGAAAGCAATGGACTGCATAATTAA 57.591 32.000 0.00 0.00 45.18 1.40
351 361 7.555914 TGTAGAAAGCAATGGACTGCATAATTA 59.444 33.333 0.00 0.00 45.18 1.40
352 362 5.927281 AGAAAGCAATGGACTGCATAATT 57.073 34.783 0.00 0.00 45.18 1.40
353 363 5.887598 TGTAGAAAGCAATGGACTGCATAAT 59.112 36.000 0.00 0.00 45.18 1.28
354 364 5.123820 GTGTAGAAAGCAATGGACTGCATAA 59.876 40.000 0.00 0.00 45.18 1.90
355 365 4.635765 GTGTAGAAAGCAATGGACTGCATA 59.364 41.667 0.00 0.00 45.18 3.14
356 366 3.441572 GTGTAGAAAGCAATGGACTGCAT 59.558 43.478 0.00 0.00 45.18 3.96
357 367 2.813754 GTGTAGAAAGCAATGGACTGCA 59.186 45.455 0.00 0.00 45.18 4.41
358 368 2.813754 TGTGTAGAAAGCAATGGACTGC 59.186 45.455 0.00 0.00 42.97 4.40
359 369 4.318332 TCTGTGTAGAAAGCAATGGACTG 58.682 43.478 0.00 0.00 0.00 3.51
360 370 4.623932 TCTGTGTAGAAAGCAATGGACT 57.376 40.909 0.00 0.00 0.00 3.85
361 371 5.689383 TTTCTGTGTAGAAAGCAATGGAC 57.311 39.130 0.00 0.00 45.46 4.02
372 382 9.462606 TCACTCATAGACTTATTTCTGTGTAGA 57.537 33.333 0.00 0.00 36.42 2.59
373 383 9.509855 GTCACTCATAGACTTATTTCTGTGTAG 57.490 37.037 0.00 0.00 36.42 2.74
374 384 9.020731 TGTCACTCATAGACTTATTTCTGTGTA 57.979 33.333 0.00 0.00 36.42 2.90
375 385 7.896811 TGTCACTCATAGACTTATTTCTGTGT 58.103 34.615 0.00 0.00 36.42 3.72
376 386 8.763049 TTGTCACTCATAGACTTATTTCTGTG 57.237 34.615 0.00 0.00 36.37 3.66
377 387 9.778741 TTTTGTCACTCATAGACTTATTTCTGT 57.221 29.630 0.00 0.00 36.94 3.41
383 393 9.950496 ACAAGATTTTGTCACTCATAGACTTAT 57.050 29.630 0.00 0.00 44.00 1.73
385 395 9.429359 CTACAAGATTTTGTCACTCATAGACTT 57.571 33.333 4.66 0.00 44.00 3.01
386 396 8.589338 ACTACAAGATTTTGTCACTCATAGACT 58.411 33.333 4.66 0.00 44.00 3.24
387 397 8.764524 ACTACAAGATTTTGTCACTCATAGAC 57.235 34.615 4.66 0.00 44.00 2.59
388 398 8.035394 GGACTACAAGATTTTGTCACTCATAGA 58.965 37.037 4.66 0.00 44.00 1.98
389 399 8.037758 AGGACTACAAGATTTTGTCACTCATAG 58.962 37.037 4.66 0.00 44.00 2.23
390 400 7.907389 AGGACTACAAGATTTTGTCACTCATA 58.093 34.615 4.66 0.00 44.00 2.15
391 401 6.773638 AGGACTACAAGATTTTGTCACTCAT 58.226 36.000 4.66 0.00 44.00 2.90
392 402 6.174720 AGGACTACAAGATTTTGTCACTCA 57.825 37.500 4.66 0.00 44.00 3.41
393 403 7.226720 TCAAAGGACTACAAGATTTTGTCACTC 59.773 37.037 4.66 0.00 44.00 3.51
394 404 7.054124 TCAAAGGACTACAAGATTTTGTCACT 58.946 34.615 4.66 0.00 44.00 3.41
395 405 7.259290 TCAAAGGACTACAAGATTTTGTCAC 57.741 36.000 4.66 0.00 44.00 3.67
396 406 8.463930 AATCAAAGGACTACAAGATTTTGTCA 57.536 30.769 4.66 0.00 44.00 3.58
397 407 9.399403 GAAATCAAAGGACTACAAGATTTTGTC 57.601 33.333 4.66 0.00 44.00 3.18
399 409 9.918630 ATGAAATCAAAGGACTACAAGATTTTG 57.081 29.630 0.00 0.00 36.25 2.44
401 411 9.918630 CAATGAAATCAAAGGACTACAAGATTT 57.081 29.630 0.00 0.00 38.11 2.17
402 412 9.082313 ACAATGAAATCAAAGGACTACAAGATT 57.918 29.630 0.00 0.00 0.00 2.40
403 413 8.641498 ACAATGAAATCAAAGGACTACAAGAT 57.359 30.769 0.00 0.00 0.00 2.40
404 414 8.463930 AACAATGAAATCAAAGGACTACAAGA 57.536 30.769 0.00 0.00 0.00 3.02
406 416 9.959749 GTAAACAATGAAATCAAAGGACTACAA 57.040 29.630 0.00 0.00 0.00 2.41
407 417 9.126151 TGTAAACAATGAAATCAAAGGACTACA 57.874 29.630 0.00 0.00 0.00 2.74
408 418 9.959749 TTGTAAACAATGAAATCAAAGGACTAC 57.040 29.630 0.00 0.00 0.00 2.73
410 420 8.695456 ACTTGTAAACAATGAAATCAAAGGACT 58.305 29.630 0.00 0.00 35.02 3.85
411 421 8.755018 CACTTGTAAACAATGAAATCAAAGGAC 58.245 33.333 0.00 0.00 35.02 3.85
412 422 8.690884 TCACTTGTAAACAATGAAATCAAAGGA 58.309 29.630 0.00 0.00 35.02 3.36
413 423 8.870160 TCACTTGTAAACAATGAAATCAAAGG 57.130 30.769 0.00 0.00 35.02 3.11
415 425 8.763356 GCATCACTTGTAAACAATGAAATCAAA 58.237 29.630 10.09 0.00 35.02 2.69
416 426 7.924947 TGCATCACTTGTAAACAATGAAATCAA 59.075 29.630 10.09 0.00 35.02 2.57
417 427 7.432059 TGCATCACTTGTAAACAATGAAATCA 58.568 30.769 10.09 0.00 35.02 2.57
418 428 7.062605 CCTGCATCACTTGTAAACAATGAAATC 59.937 37.037 10.09 5.67 35.02 2.17
419 429 6.869913 CCTGCATCACTTGTAAACAATGAAAT 59.130 34.615 10.09 0.00 35.02 2.17
420 430 6.215121 CCTGCATCACTTGTAAACAATGAAA 58.785 36.000 10.09 2.89 35.02 2.69
421 431 5.278907 CCCTGCATCACTTGTAAACAATGAA 60.279 40.000 10.09 0.00 35.02 2.57
422 432 4.218200 CCCTGCATCACTTGTAAACAATGA 59.782 41.667 0.00 3.80 35.02 2.57
423 433 4.487948 CCCTGCATCACTTGTAAACAATG 58.512 43.478 0.00 0.00 35.02 2.82
424 434 3.511146 CCCCTGCATCACTTGTAAACAAT 59.489 43.478 0.00 0.00 35.02 2.71
425 435 2.890311 CCCCTGCATCACTTGTAAACAA 59.110 45.455 0.00 0.00 0.00 2.83
426 436 2.158534 ACCCCTGCATCACTTGTAAACA 60.159 45.455 0.00 0.00 0.00 2.83
427 437 2.514803 ACCCCTGCATCACTTGTAAAC 58.485 47.619 0.00 0.00 0.00 2.01
428 438 2.890311 CAACCCCTGCATCACTTGTAAA 59.110 45.455 0.00 0.00 0.00 2.01
429 439 2.513753 CAACCCCTGCATCACTTGTAA 58.486 47.619 0.00 0.00 0.00 2.41
430 440 2.198827 CAACCCCTGCATCACTTGTA 57.801 50.000 0.00 0.00 0.00 2.41
431 441 3.040965 CAACCCCTGCATCACTTGT 57.959 52.632 0.00 0.00 0.00 3.16
441 451 0.465287 AAAGTGCAAAGCAACCCCTG 59.535 50.000 0.00 0.00 41.47 4.45
442 452 1.138859 GAAAAGTGCAAAGCAACCCCT 59.861 47.619 0.00 0.00 41.47 4.79
443 453 1.138859 AGAAAAGTGCAAAGCAACCCC 59.861 47.619 0.00 0.00 41.47 4.95
444 454 2.602257 AGAAAAGTGCAAAGCAACCC 57.398 45.000 0.00 0.00 41.47 4.11
445 455 6.257630 TGAAATAAGAAAAGTGCAAAGCAACC 59.742 34.615 0.00 0.00 41.47 3.77
446 456 7.232945 TGAAATAAGAAAAGTGCAAAGCAAC 57.767 32.000 0.00 0.00 41.47 4.17
447 457 7.041916 CCATGAAATAAGAAAAGTGCAAAGCAA 60.042 33.333 0.00 0.00 41.47 3.91
448 458 6.424509 CCATGAAATAAGAAAAGTGCAAAGCA 59.575 34.615 0.00 0.00 35.60 3.91
449 459 6.646240 TCCATGAAATAAGAAAAGTGCAAAGC 59.354 34.615 0.00 0.00 0.00 3.51
450 460 8.653338 CATCCATGAAATAAGAAAAGTGCAAAG 58.347 33.333 0.00 0.00 0.00 2.77
451 461 7.118101 GCATCCATGAAATAAGAAAAGTGCAAA 59.882 33.333 0.00 0.00 0.00 3.68
452 462 6.591062 GCATCCATGAAATAAGAAAAGTGCAA 59.409 34.615 0.00 0.00 0.00 4.08
453 463 6.071221 AGCATCCATGAAATAAGAAAAGTGCA 60.071 34.615 0.00 0.00 0.00 4.57
454 464 6.335777 AGCATCCATGAAATAAGAAAAGTGC 58.664 36.000 0.00 0.00 0.00 4.40
455 465 7.917505 GGTAGCATCCATGAAATAAGAAAAGTG 59.082 37.037 0.00 0.00 0.00 3.16
456 466 7.836183 AGGTAGCATCCATGAAATAAGAAAAGT 59.164 33.333 0.00 0.00 0.00 2.66
457 467 8.230472 AGGTAGCATCCATGAAATAAGAAAAG 57.770 34.615 0.00 0.00 0.00 2.27
458 468 8.055181 AGAGGTAGCATCCATGAAATAAGAAAA 58.945 33.333 0.00 0.00 0.00 2.29
459 469 7.577303 AGAGGTAGCATCCATGAAATAAGAAA 58.423 34.615 0.00 0.00 0.00 2.52
460 470 7.141758 AGAGGTAGCATCCATGAAATAAGAA 57.858 36.000 0.00 0.00 0.00 2.52
461 471 6.753913 AGAGGTAGCATCCATGAAATAAGA 57.246 37.500 0.00 0.00 0.00 2.10
462 472 7.675062 AGTAGAGGTAGCATCCATGAAATAAG 58.325 38.462 0.00 0.00 0.00 1.73
463 473 7.618019 AGTAGAGGTAGCATCCATGAAATAA 57.382 36.000 0.00 0.00 0.00 1.40
464 474 7.618019 AAGTAGAGGTAGCATCCATGAAATA 57.382 36.000 0.00 0.00 0.00 1.40
465 475 6.506538 AAGTAGAGGTAGCATCCATGAAAT 57.493 37.500 0.00 0.00 0.00 2.17
466 476 5.957771 AAGTAGAGGTAGCATCCATGAAA 57.042 39.130 0.00 0.00 0.00 2.69
467 477 5.451937 CGAAAGTAGAGGTAGCATCCATGAA 60.452 44.000 0.00 0.00 0.00 2.57
468 478 4.038042 CGAAAGTAGAGGTAGCATCCATGA 59.962 45.833 0.00 0.00 0.00 3.07
469 479 4.038042 TCGAAAGTAGAGGTAGCATCCATG 59.962 45.833 0.00 0.00 0.00 3.66
470 480 4.215908 TCGAAAGTAGAGGTAGCATCCAT 58.784 43.478 0.00 0.00 0.00 3.41
471 481 3.628008 TCGAAAGTAGAGGTAGCATCCA 58.372 45.455 0.00 0.00 0.00 3.41
472 482 4.650754 TTCGAAAGTAGAGGTAGCATCC 57.349 45.455 0.00 0.00 0.00 3.51
473 483 5.892568 TCTTTCGAAAGTAGAGGTAGCATC 58.107 41.667 31.29 0.00 37.31 3.91
474 484 5.916661 TCTTTCGAAAGTAGAGGTAGCAT 57.083 39.130 31.29 0.00 37.31 3.79
475 485 5.243283 ACTTCTTTCGAAAGTAGAGGTAGCA 59.757 40.000 36.34 15.47 37.03 3.49
476 486 5.573669 CACTTCTTTCGAAAGTAGAGGTAGC 59.426 44.000 36.34 0.00 37.03 3.58
477 487 6.679843 ACACTTCTTTCGAAAGTAGAGGTAG 58.320 40.000 36.34 24.83 37.03 3.18
478 488 6.645790 ACACTTCTTTCGAAAGTAGAGGTA 57.354 37.500 36.34 17.32 37.03 3.08
479 489 5.532664 ACACTTCTTTCGAAAGTAGAGGT 57.467 39.130 36.34 30.19 37.03 3.85
480 490 8.535690 AAATACACTTCTTTCGAAAGTAGAGG 57.464 34.615 36.34 29.73 37.03 3.69
482 492 9.760077 AGAAAATACACTTCTTTCGAAAGTAGA 57.240 29.630 36.34 22.29 37.03 2.59
502 512 9.470399 AACCAAACGGAAATAGGTATAGAAAAT 57.530 29.630 0.00 0.00 31.10 1.82
503 513 8.866970 AACCAAACGGAAATAGGTATAGAAAA 57.133 30.769 0.00 0.00 31.10 2.29
504 514 8.866970 AAACCAAACGGAAATAGGTATAGAAA 57.133 30.769 0.00 0.00 31.10 2.52
505 515 9.956640 TTAAACCAAACGGAAATAGGTATAGAA 57.043 29.630 0.00 0.00 31.10 2.10
509 519 8.829612 CGTATTAAACCAAACGGAAATAGGTAT 58.170 33.333 0.00 0.00 31.10 2.73
510 520 8.195617 CGTATTAAACCAAACGGAAATAGGTA 57.804 34.615 0.00 0.00 31.10 3.08
511 521 7.075674 CGTATTAAACCAAACGGAAATAGGT 57.924 36.000 0.00 0.00 0.00 3.08
520 530 3.058777 AGCACACCGTATTAAACCAAACG 60.059 43.478 0.00 0.00 35.20 3.60
521 531 4.492791 AGCACACCGTATTAAACCAAAC 57.507 40.909 0.00 0.00 0.00 2.93
522 532 4.579340 TGAAGCACACCGTATTAAACCAAA 59.421 37.500 0.00 0.00 0.00 3.28
523 533 4.135306 TGAAGCACACCGTATTAAACCAA 58.865 39.130 0.00 0.00 0.00 3.67
524 534 3.741249 TGAAGCACACCGTATTAAACCA 58.259 40.909 0.00 0.00 0.00 3.67
525 535 4.752661 TTGAAGCACACCGTATTAAACC 57.247 40.909 0.00 0.00 0.00 3.27
549 559 9.740710 AGTATAAAGCCACTTAGAAACTTCATT 57.259 29.630 0.00 0.00 0.00 2.57
550 560 9.740710 AAGTATAAAGCCACTTAGAAACTTCAT 57.259 29.630 0.00 0.00 33.29 2.57
551 561 9.569122 AAAGTATAAAGCCACTTAGAAACTTCA 57.431 29.630 0.00 0.00 33.92 3.02
552 562 9.827411 CAAAGTATAAAGCCACTTAGAAACTTC 57.173 33.333 0.00 0.00 33.92 3.01
553 563 8.793592 CCAAAGTATAAAGCCACTTAGAAACTT 58.206 33.333 0.00 0.00 33.92 2.66
554 564 7.393515 CCCAAAGTATAAAGCCACTTAGAAACT 59.606 37.037 0.00 0.00 33.92 2.66
555 565 7.176165 ACCCAAAGTATAAAGCCACTTAGAAAC 59.824 37.037 0.00 0.00 33.92 2.78
556 566 7.235804 ACCCAAAGTATAAAGCCACTTAGAAA 58.764 34.615 0.00 0.00 33.92 2.52
557 567 6.786122 ACCCAAAGTATAAAGCCACTTAGAA 58.214 36.000 0.00 0.00 33.92 2.10
558 568 6.013206 TGACCCAAAGTATAAAGCCACTTAGA 60.013 38.462 0.00 0.00 33.92 2.10
559 569 6.177610 TGACCCAAAGTATAAAGCCACTTAG 58.822 40.000 0.00 0.00 33.92 2.18
560 570 6.129414 TGACCCAAAGTATAAAGCCACTTA 57.871 37.500 0.00 0.00 33.92 2.24
561 571 4.993028 TGACCCAAAGTATAAAGCCACTT 58.007 39.130 0.00 0.00 36.56 3.16
562 572 4.042934 ACTGACCCAAAGTATAAAGCCACT 59.957 41.667 0.00 0.00 0.00 4.00
563 573 4.332828 ACTGACCCAAAGTATAAAGCCAC 58.667 43.478 0.00 0.00 0.00 5.01
564 574 4.650972 ACTGACCCAAAGTATAAAGCCA 57.349 40.909 0.00 0.00 0.00 4.75
565 575 9.433153 GTATATACTGACCCAAAGTATAAAGCC 57.567 37.037 5.58 0.00 43.08 4.35
577 587 9.931698 CCCTGTATATTAGTATATACTGACCCA 57.068 37.037 23.09 11.76 44.89 4.51
578 588 8.858094 GCCCTGTATATTAGTATATACTGACCC 58.142 40.741 23.09 8.38 44.89 4.46
579 589 8.858094 GGCCCTGTATATTAGTATATACTGACC 58.142 40.741 23.09 7.36 44.89 4.02
580 590 9.417561 TGGCCCTGTATATTAGTATATACTGAC 57.582 37.037 23.09 13.54 44.89 3.51
607 617 9.912634 CAGAAAAATGGGTCGCAAATATAATAT 57.087 29.630 0.00 0.00 0.00 1.28
643 653 8.793592 GGAATTTAAGAATGTTACCACTGAACT 58.206 33.333 0.00 0.00 0.00 3.01
644 654 8.027189 GGGAATTTAAGAATGTTACCACTGAAC 58.973 37.037 0.00 0.00 0.00 3.18
645 655 7.726291 TGGGAATTTAAGAATGTTACCACTGAA 59.274 33.333 0.00 0.00 0.00 3.02
646 656 7.235079 TGGGAATTTAAGAATGTTACCACTGA 58.765 34.615 0.00 0.00 0.00 3.41
647 657 7.461182 TGGGAATTTAAGAATGTTACCACTG 57.539 36.000 0.00 0.00 0.00 3.66
672 682 0.106918 TCAGGGAAAACAACACCGCT 60.107 50.000 0.00 0.00 0.00 5.52
674 684 0.306533 CGTCAGGGAAAACAACACCG 59.693 55.000 0.00 0.00 0.00 4.94
675 685 0.030235 GCGTCAGGGAAAACAACACC 59.970 55.000 0.00 0.00 0.00 4.16
693 705 3.008330 CAAGATATATGAGGCAGGCAGC 58.992 50.000 0.00 0.00 44.65 5.25
731 743 5.005628 AGCCCCTTCATTAACCAAGTTTA 57.994 39.130 0.00 0.00 0.00 2.01
888 931 1.808945 GCAGAGGTCAACTGGTCATTG 59.191 52.381 0.00 0.00 36.09 2.82
896 939 1.002544 GCTAACTGGCAGAGGTCAACT 59.997 52.381 23.66 0.00 0.00 3.16
909 952 7.335422 AGGATAGTGTTCTCAAAATGCTAACTG 59.665 37.037 0.00 0.00 0.00 3.16
927 970 2.898729 ACTTGATCGGCAGGATAGTG 57.101 50.000 0.00 0.00 34.82 2.74
937 980 4.509600 GGCATAAGAGAAGAACTTGATCGG 59.490 45.833 0.00 0.00 0.00 4.18
938 981 4.509600 GGGCATAAGAGAAGAACTTGATCG 59.490 45.833 0.00 0.00 0.00 3.69
948 991 5.826737 ACTGATCAATTGGGCATAAGAGAAG 59.173 40.000 5.42 0.00 0.00 2.85
959 1002 3.693085 CCAGTGAGAACTGATCAATTGGG 59.307 47.826 5.42 0.00 39.99 4.12
1001 1044 0.183492 ACTTTCTGCACCTTCAGGCA 59.817 50.000 0.00 0.00 39.32 4.75
1023 1066 6.726490 TCCATAAGGAATACAGTGGTAGTC 57.274 41.667 0.00 0.00 42.23 2.59
1075 1118 6.828785 AGTTACCTTTGAGTGTGATCAAAAGT 59.171 34.615 13.25 8.13 45.80 2.66
1076 1119 7.264373 AGTTACCTTTGAGTGTGATCAAAAG 57.736 36.000 0.00 3.33 45.80 2.27
1118 1161 5.395682 AAACATGTGCAGATGCTAAATGT 57.604 34.783 22.79 9.84 42.66 2.71
1144 1187 8.094548 AGGTTCAAATTTATTTTCACTTAGCCC 58.905 33.333 0.00 0.00 0.00 5.19
1158 1201 9.349713 AGTGTATCACAGAAAGGTTCAAATTTA 57.650 29.630 2.80 0.00 36.74 1.40
1239 1283 6.384224 TCAACTTCTTTCATCATGATTGCAC 58.616 36.000 5.16 0.00 0.00 4.57
1248 1292 9.793259 AAGTATTTACCTCAACTTCTTTCATCA 57.207 29.630 0.00 0.00 0.00 3.07
1272 1323 7.621428 TTCTATTGAGAAAGCTGAATGGAAG 57.379 36.000 0.00 0.00 39.16 3.46
1275 1326 6.736123 CCATTCTATTGAGAAAGCTGAATGG 58.264 40.000 17.30 17.30 46.79 3.16
1302 1356 1.614903 CAAATGCAAGGCAGGAGAACA 59.385 47.619 0.00 0.00 43.65 3.18
1341 1395 1.336755 GAACAACAGCGAACCACCAAT 59.663 47.619 0.00 0.00 0.00 3.16
1345 1399 3.825812 CTGAACAACAGCGAACCAC 57.174 52.632 0.00 0.00 39.86 4.16
1388 1442 9.800433 GTAGAACCTGATAGTAAAAGGTAAGAC 57.200 37.037 7.40 3.56 43.62 3.01
1403 1457 3.964031 GTCTCCCTGATGTAGAACCTGAT 59.036 47.826 0.00 0.00 0.00 2.90
1412 1466 3.197766 GTCCACATTGTCTCCCTGATGTA 59.802 47.826 0.00 0.00 31.92 2.29
1427 1481 4.718961 ACTAAAAAGAGCACAGTCCACAT 58.281 39.130 0.00 0.00 0.00 3.21
1428 1482 4.150897 ACTAAAAAGAGCACAGTCCACA 57.849 40.909 0.00 0.00 0.00 4.17
1496 1552 6.916360 AAACCTGAATAATTTCTTCCAGCA 57.084 33.333 0.00 0.00 32.78 4.41
1498 1554 8.579863 AGACAAAACCTGAATAATTTCTTCCAG 58.420 33.333 0.00 0.00 32.78 3.86
1533 1589 7.786464 AGAACATATTTCTATGGGCCAGAAAAT 59.214 33.333 20.69 20.59 43.30 1.82
1558 1614 6.264518 ACTGGGTTGTGGTTTGTAAAGAATAG 59.735 38.462 0.00 0.00 0.00 1.73
1627 1833 0.764369 ACACCAAGGGCACTCTCTCA 60.764 55.000 0.00 0.00 0.00 3.27
1681 1887 2.420022 GCTGCAAACAAGGATATCGTGT 59.580 45.455 0.00 1.88 39.70 4.49
1724 1930 8.499288 AAACATAAGGGGAAACAAGGAAAATA 57.501 30.769 0.00 0.00 0.00 1.40
1741 1947 4.878397 AGAAAGGGCGATCTGAAACATAAG 59.122 41.667 0.00 0.00 0.00 1.73
1746 1952 4.000988 TGTTAGAAAGGGCGATCTGAAAC 58.999 43.478 0.00 0.00 0.00 2.78
1815 2164 6.942532 AGCAGACATTTAAAAGTGAGAACA 57.057 33.333 0.00 0.00 0.00 3.18
1838 2198 2.756207 TGGAGTACGATTCGATGGTCAA 59.244 45.455 13.95 0.00 0.00 3.18
1849 2209 8.127150 TGATAGATGAATTGATGGAGTACGAT 57.873 34.615 0.00 0.00 0.00 3.73
1906 2266 6.038382 TGTTTCTTTTGCCGTTATCAGTTACA 59.962 34.615 0.00 0.00 0.00 2.41
1907 2267 6.432107 TGTTTCTTTTGCCGTTATCAGTTAC 58.568 36.000 0.00 0.00 0.00 2.50
1908 2268 6.621316 TGTTTCTTTTGCCGTTATCAGTTA 57.379 33.333 0.00 0.00 0.00 2.24
1909 2269 5.508200 TGTTTCTTTTGCCGTTATCAGTT 57.492 34.783 0.00 0.00 0.00 3.16
1910 2270 4.556699 GCTGTTTCTTTTGCCGTTATCAGT 60.557 41.667 0.00 0.00 0.00 3.41
1911 2271 3.914364 GCTGTTTCTTTTGCCGTTATCAG 59.086 43.478 0.00 0.00 0.00 2.90
1913 2273 3.896122 TGCTGTTTCTTTTGCCGTTATC 58.104 40.909 0.00 0.00 0.00 1.75
1914 2274 4.314740 TTGCTGTTTCTTTTGCCGTTAT 57.685 36.364 0.00 0.00 0.00 1.89
1915 2275 3.784701 TTGCTGTTTCTTTTGCCGTTA 57.215 38.095 0.00 0.00 0.00 3.18
1916 2276 2.663826 TTGCTGTTTCTTTTGCCGTT 57.336 40.000 0.00 0.00 0.00 4.44
1918 2278 2.670414 TGTTTTGCTGTTTCTTTTGCCG 59.330 40.909 0.00 0.00 0.00 5.69
1920 2280 5.220557 ACATGTTTTGCTGTTTCTTTTGC 57.779 34.783 0.00 0.00 0.00 3.68
1923 2283 9.762933 ATATGTAACATGTTTTGCTGTTTCTTT 57.237 25.926 17.78 0.00 36.92 2.52
2037 2532 7.366513 GCCTCTCAGAAAATTAATAAGGATGC 58.633 38.462 0.00 0.00 0.00 3.91
2060 2555 1.752833 CCCGGTAGGATTGTAGGCC 59.247 63.158 0.00 0.00 41.02 5.19
2075 2570 4.153475 CGATGGGTTAAATTACTATGCCCG 59.847 45.833 0.00 0.00 37.49 6.13
2119 2820 7.718525 ACTTAATACGGTTGTTTGAAAACCAT 58.281 30.769 6.19 0.00 46.24 3.55
2253 2954 6.993079 TGAATAGTAGTGTGTGTGAGAACAT 58.007 36.000 0.00 0.00 31.49 2.71
2277 2978 9.218525 TCAGATCTTCTCATTTTTCCTACCTAT 57.781 33.333 0.00 0.00 0.00 2.57
2279 2980 7.502060 TCAGATCTTCTCATTTTTCCTACCT 57.498 36.000 0.00 0.00 0.00 3.08
2333 3447 9.313118 TGTAATACACAGATCATGTAATGACAC 57.687 33.333 12.34 7.80 44.01 3.67
2350 3464 7.762615 TGCCAACAGAATAGTACTGTAATACAC 59.237 37.037 5.39 0.00 46.01 2.90
2352 3466 8.888579 ATGCCAACAGAATAGTACTGTAATAC 57.111 34.615 5.39 0.00 46.01 1.89
2353 3467 9.899661 AAATGCCAACAGAATAGTACTGTAATA 57.100 29.630 5.39 0.00 46.01 0.98
2354 3468 8.807948 AAATGCCAACAGAATAGTACTGTAAT 57.192 30.769 5.39 0.00 46.01 1.89
2356 3470 8.315482 TGTAAATGCCAACAGAATAGTACTGTA 58.685 33.333 5.39 0.00 46.01 2.74
2358 3472 7.609760 TGTAAATGCCAACAGAATAGTACTG 57.390 36.000 5.39 0.00 40.68 2.74
2359 3473 8.046708 TGATGTAAATGCCAACAGAATAGTACT 58.953 33.333 0.00 0.00 0.00 2.73
2360 3474 8.208718 TGATGTAAATGCCAACAGAATAGTAC 57.791 34.615 0.00 0.00 0.00 2.73
2361 3475 8.978874 ATGATGTAAATGCCAACAGAATAGTA 57.021 30.769 0.00 0.00 0.00 1.82
2362 3476 7.557358 TGATGATGTAAATGCCAACAGAATAGT 59.443 33.333 0.00 0.00 0.00 2.12
2363 3477 7.859377 GTGATGATGTAAATGCCAACAGAATAG 59.141 37.037 0.00 0.00 0.00 1.73
2364 3478 7.338957 TGTGATGATGTAAATGCCAACAGAATA 59.661 33.333 0.00 0.00 0.00 1.75
2365 3479 6.153170 TGTGATGATGTAAATGCCAACAGAAT 59.847 34.615 0.00 0.00 0.00 2.40
2402 3950 3.308438 TCTGTTCGCTTAACTGGTACC 57.692 47.619 4.43 4.43 38.99 3.34
2403 3951 4.091509 CACATCTGTTCGCTTAACTGGTAC 59.908 45.833 6.06 0.00 38.99 3.34
2421 3969 7.273381 ATACAAAAAGTATTGCTTTCGCACATC 59.727 33.333 0.00 0.00 45.91 3.06
2459 4007 7.988028 CCTTTAGGCTAACTGCTACTAGAAAAT 59.012 37.037 6.43 0.00 42.39 1.82
2469 4017 5.045578 TGAAATCTCCTTTAGGCTAACTGCT 60.046 40.000 6.43 0.00 42.39 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.