Multiple sequence alignment - TraesCS3A01G008100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G008100 chr3A 100.000 4446 0 0 999 5444 7948592 7953037 0.000000e+00 8211.0
1 TraesCS3A01G008100 chr3A 100.000 622 0 0 1 622 7947594 7948215 0.000000e+00 1149.0
2 TraesCS3A01G008100 chr3A 93.385 257 11 2 5082 5338 7958472 7958722 5.150000e-100 375.0
3 TraesCS3A01G008100 chr3D 96.714 4352 110 11 999 5338 1256698 1252368 0.000000e+00 7214.0
4 TraesCS3A01G008100 chr3D 98.225 169 3 0 340 508 1257295 1257127 4.120000e-76 296.0
5 TraesCS3A01G008100 chr3D 94.915 59 3 0 546 604 1257046 1256988 5.810000e-15 93.5
6 TraesCS3A01G008100 chrUn 92.823 1672 64 28 2923 4564 34304610 34302965 0.000000e+00 2372.0
7 TraesCS3A01G008100 chrUn 96.194 1156 28 7 999 2147 429470992 429469846 0.000000e+00 1877.0
8 TraesCS3A01G008100 chrUn 94.330 776 26 3 2149 2921 467335986 467335226 0.000000e+00 1173.0
9 TraesCS3A01G008100 chrUn 97.041 169 5 0 340 508 333461004 333461172 8.920000e-73 285.0
10 TraesCS3A01G008100 chrUn 95.556 90 4 0 516 605 333461235 333461324 1.580000e-30 145.0
11 TraesCS3A01G008100 chrUn 90.588 85 8 0 4595 4679 34302971 34302887 4.460000e-21 113.0
12 TraesCS3A01G008100 chr7B 96.142 337 12 1 2 337 164152462 164152126 2.870000e-152 549.0
13 TraesCS3A01G008100 chr2B 93.913 345 12 2 2 337 766228518 766228862 3.760000e-141 512.0
14 TraesCS3A01G008100 chr3B 94.065 337 18 2 2 337 187798623 187798958 1.350000e-140 510.0
15 TraesCS3A01G008100 chr5A 84.814 349 34 11 2 333 651908696 651908350 3.140000e-87 333.0
16 TraesCS3A01G008100 chr5A 82.249 338 50 6 2 333 393036058 393035725 3.210000e-72 283.0
17 TraesCS3A01G008100 chr6D 81.792 346 39 10 2 332 214552724 214552388 8.990000e-68 268.0
18 TraesCS3A01G008100 chr5B 94.737 38 1 1 5143 5179 429415366 429415403 2.120000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G008100 chr3A 7947594 7953037 5443 False 4680.0 8211 100.0000 1 5444 2 chr3A.!!$F2 5443
1 TraesCS3A01G008100 chr3D 1252368 1257295 4927 True 2534.5 7214 96.6180 340 5338 3 chr3D.!!$R1 4998
2 TraesCS3A01G008100 chrUn 429469846 429470992 1146 True 1877.0 1877 96.1940 999 2147 1 chrUn.!!$R1 1148
3 TraesCS3A01G008100 chrUn 34302887 34304610 1723 True 1242.5 2372 91.7055 2923 4679 2 chrUn.!!$R3 1756
4 TraesCS3A01G008100 chrUn 467335226 467335986 760 True 1173.0 1173 94.3300 2149 2921 1 chrUn.!!$R2 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
618 677 0.104120 GTTGTGTTGACTTTGGGGGC 59.896 55.000 0.00 0.00 0.00 5.80 F
619 678 0.324738 TTGTGTTGACTTTGGGGGCA 60.325 50.000 0.00 0.00 0.00 5.36 F
620 679 0.754957 TGTGTTGACTTTGGGGGCAG 60.755 55.000 0.00 0.00 0.00 4.85 F
1145 1204 1.134159 CAGCTTTGCTAGGCAGAGGAT 60.134 52.381 4.93 0.00 40.46 3.24 F
1263 1322 3.081804 GGACGATGTGGAGGAACAAATT 58.918 45.455 0.00 0.00 32.81 1.82 F
2896 2965 0.727122 GTGATGTCAAGCGCTTGCAC 60.727 55.000 38.89 33.68 42.66 4.57 F
3063 3132 1.102978 CCAGAATTTAAGGGCACGGG 58.897 55.000 0.00 0.00 0.00 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1484 1543 0.108804 CTTACGCCGCTCTTCTTGGA 60.109 55.000 0.00 0.0 0.00 3.53 R
1569 1628 1.073897 GCTGAACTGCCCTTGGAGT 59.926 57.895 0.00 0.0 0.00 3.85 R
2501 2567 1.416401 ACCCGTCGGCTCATCATTATT 59.584 47.619 5.50 0.0 0.00 1.40 R
2887 2956 0.024873 GTTGTTTGTTGTGCAAGCGC 59.975 50.000 0.00 0.0 40.56 5.92 R
3062 3131 0.175531 AGCAAACACACCAACTTGCC 59.824 50.000 2.22 0.0 44.14 4.52 R
4204 4291 0.964358 GCTATGATGCTGGATGCCCC 60.964 60.000 0.00 0.0 42.00 5.80 R
5039 5143 0.527817 CCCTCGCAACCGATCACTAC 60.528 60.000 0.00 0.0 43.47 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.267974 CCTCAACTCGGCTTTGCC 58.732 61.111 0.00 0.00 46.75 4.52
27 28 3.308705 GCTTTGCCAGCCTTGCCT 61.309 61.111 0.00 0.00 43.65 4.75
28 29 2.654877 CTTTGCCAGCCTTGCCTG 59.345 61.111 0.00 0.00 0.00 4.85
37 38 3.379445 CCTTGCCTGGGCTGCTTG 61.379 66.667 13.05 0.00 42.51 4.01
38 39 2.599578 CTTGCCTGGGCTGCTTGT 60.600 61.111 13.05 0.00 42.51 3.16
39 40 2.123338 TTGCCTGGGCTGCTTGTT 60.123 55.556 13.05 0.00 42.51 2.83
40 41 1.751349 CTTGCCTGGGCTGCTTGTTT 61.751 55.000 13.05 0.00 42.51 2.83
41 42 2.030490 TTGCCTGGGCTGCTTGTTTG 62.030 55.000 13.05 0.00 42.51 2.93
42 43 3.053828 CCTGGGCTGCTTGTTTGG 58.946 61.111 0.00 0.00 0.00 3.28
43 44 1.833934 CCTGGGCTGCTTGTTTGGT 60.834 57.895 0.00 0.00 0.00 3.67
44 45 1.402107 CCTGGGCTGCTTGTTTGGTT 61.402 55.000 0.00 0.00 0.00 3.67
45 46 1.327303 CTGGGCTGCTTGTTTGGTTA 58.673 50.000 0.00 0.00 0.00 2.85
46 47 1.895131 CTGGGCTGCTTGTTTGGTTAT 59.105 47.619 0.00 0.00 0.00 1.89
47 48 2.299867 CTGGGCTGCTTGTTTGGTTATT 59.700 45.455 0.00 0.00 0.00 1.40
48 49 2.703007 TGGGCTGCTTGTTTGGTTATTT 59.297 40.909 0.00 0.00 0.00 1.40
49 50 3.135530 TGGGCTGCTTGTTTGGTTATTTT 59.864 39.130 0.00 0.00 0.00 1.82
50 51 3.745975 GGGCTGCTTGTTTGGTTATTTTC 59.254 43.478 0.00 0.00 0.00 2.29
51 52 4.503123 GGGCTGCTTGTTTGGTTATTTTCT 60.503 41.667 0.00 0.00 0.00 2.52
52 53 5.056480 GGCTGCTTGTTTGGTTATTTTCTT 58.944 37.500 0.00 0.00 0.00 2.52
53 54 5.527214 GGCTGCTTGTTTGGTTATTTTCTTT 59.473 36.000 0.00 0.00 0.00 2.52
54 55 6.038161 GGCTGCTTGTTTGGTTATTTTCTTTT 59.962 34.615 0.00 0.00 0.00 2.27
55 56 6.906678 GCTGCTTGTTTGGTTATTTTCTTTTG 59.093 34.615 0.00 0.00 0.00 2.44
56 57 6.780127 TGCTTGTTTGGTTATTTTCTTTTGC 58.220 32.000 0.00 0.00 0.00 3.68
57 58 6.597280 TGCTTGTTTGGTTATTTTCTTTTGCT 59.403 30.769 0.00 0.00 0.00 3.91
58 59 6.906678 GCTTGTTTGGTTATTTTCTTTTGCTG 59.093 34.615 0.00 0.00 0.00 4.41
59 60 6.917217 TGTTTGGTTATTTTCTTTTGCTGG 57.083 33.333 0.00 0.00 0.00 4.85
60 61 6.644347 TGTTTGGTTATTTTCTTTTGCTGGA 58.356 32.000 0.00 0.00 0.00 3.86
61 62 6.760770 TGTTTGGTTATTTTCTTTTGCTGGAG 59.239 34.615 0.00 0.00 0.00 3.86
62 63 6.478512 TTGGTTATTTTCTTTTGCTGGAGT 57.521 33.333 0.00 0.00 0.00 3.85
63 64 7.589958 TTGGTTATTTTCTTTTGCTGGAGTA 57.410 32.000 0.00 0.00 0.00 2.59
64 65 7.775053 TGGTTATTTTCTTTTGCTGGAGTAT 57.225 32.000 0.00 0.00 0.00 2.12
65 66 8.871629 TGGTTATTTTCTTTTGCTGGAGTATA 57.128 30.769 0.00 0.00 0.00 1.47
66 67 9.303116 TGGTTATTTTCTTTTGCTGGAGTATAA 57.697 29.630 0.00 0.00 0.00 0.98
78 79 9.439500 TTTGCTGGAGTATAAAACTTAATACGT 57.561 29.630 0.00 0.00 39.07 3.57
80 81 9.520204 TGCTGGAGTATAAAACTTAATACGTAC 57.480 33.333 0.00 0.00 39.07 3.67
81 82 9.741647 GCTGGAGTATAAAACTTAATACGTACT 57.258 33.333 0.00 0.00 39.07 2.73
100 101 7.364970 ACGTACTTTCCATAACAAATCAAACC 58.635 34.615 0.00 0.00 0.00 3.27
101 102 6.521821 CGTACTTTCCATAACAAATCAAACCG 59.478 38.462 0.00 0.00 0.00 4.44
102 103 6.399639 ACTTTCCATAACAAATCAAACCGT 57.600 33.333 0.00 0.00 0.00 4.83
103 104 6.212955 ACTTTCCATAACAAATCAAACCGTG 58.787 36.000 0.00 0.00 0.00 4.94
104 105 4.167554 TCCATAACAAATCAAACCGTGC 57.832 40.909 0.00 0.00 0.00 5.34
105 106 3.057174 TCCATAACAAATCAAACCGTGCC 60.057 43.478 0.00 0.00 0.00 5.01
106 107 3.305676 CCATAACAAATCAAACCGTGCCA 60.306 43.478 0.00 0.00 0.00 4.92
107 108 4.493547 CATAACAAATCAAACCGTGCCAT 58.506 39.130 0.00 0.00 0.00 4.40
108 109 5.393569 CCATAACAAATCAAACCGTGCCATA 60.394 40.000 0.00 0.00 0.00 2.74
109 110 4.799564 AACAAATCAAACCGTGCCATAT 57.200 36.364 0.00 0.00 0.00 1.78
110 111 5.906113 AACAAATCAAACCGTGCCATATA 57.094 34.783 0.00 0.00 0.00 0.86
111 112 6.463995 AACAAATCAAACCGTGCCATATAT 57.536 33.333 0.00 0.00 0.00 0.86
112 113 7.575414 AACAAATCAAACCGTGCCATATATA 57.425 32.000 0.00 0.00 0.00 0.86
113 114 6.966021 ACAAATCAAACCGTGCCATATATAC 58.034 36.000 0.00 0.00 0.00 1.47
114 115 6.544197 ACAAATCAAACCGTGCCATATATACA 59.456 34.615 0.00 0.00 0.00 2.29
115 116 6.554334 AATCAAACCGTGCCATATATACAC 57.446 37.500 7.64 7.64 0.00 2.90
116 117 5.284861 TCAAACCGTGCCATATATACACT 57.715 39.130 13.36 0.00 32.07 3.55
117 118 5.294356 TCAAACCGTGCCATATATACACTC 58.706 41.667 13.36 0.00 32.07 3.51
118 119 3.955650 ACCGTGCCATATATACACTCC 57.044 47.619 13.36 0.00 32.07 3.85
119 120 2.230508 ACCGTGCCATATATACACTCCG 59.769 50.000 13.36 4.08 32.07 4.63
120 121 2.230508 CCGTGCCATATATACACTCCGT 59.769 50.000 13.36 0.00 32.07 4.69
121 122 3.441222 CCGTGCCATATATACACTCCGTA 59.559 47.826 13.36 0.00 32.07 4.02
122 123 4.082625 CCGTGCCATATATACACTCCGTAA 60.083 45.833 13.36 0.00 32.59 3.18
123 124 5.393787 CCGTGCCATATATACACTCCGTAAT 60.394 44.000 13.36 0.00 32.59 1.89
124 125 6.183360 CCGTGCCATATATACACTCCGTAATA 60.183 42.308 13.36 0.00 32.59 0.98
125 126 6.690098 CGTGCCATATATACACTCCGTAATAC 59.310 42.308 13.36 0.00 32.59 1.89
126 127 7.541162 GTGCCATATATACACTCCGTAATACA 58.459 38.462 9.69 0.00 32.59 2.29
127 128 8.195436 GTGCCATATATACACTCCGTAATACAT 58.805 37.037 9.69 0.00 32.59 2.29
128 129 8.194769 TGCCATATATACACTCCGTAATACATG 58.805 37.037 0.00 0.00 32.59 3.21
129 130 7.652105 GCCATATATACACTCCGTAATACATGG 59.348 40.741 0.00 0.00 34.97 3.66
130 131 8.909923 CCATATATACACTCCGTAATACATGGA 58.090 37.037 0.00 0.00 40.24 3.41
131 132 9.731819 CATATATACACTCCGTAATACATGGAC 57.268 37.037 0.00 0.00 37.41 4.02
132 133 9.696572 ATATATACACTCCGTAATACATGGACT 57.303 33.333 0.00 0.00 37.41 3.85
133 134 4.650754 ACACTCCGTAATACATGGACTC 57.349 45.455 0.00 0.00 37.41 3.36
134 135 4.279145 ACACTCCGTAATACATGGACTCT 58.721 43.478 0.00 0.00 37.41 3.24
135 136 4.710375 ACACTCCGTAATACATGGACTCTT 59.290 41.667 0.00 0.00 37.41 2.85
136 137 5.043903 CACTCCGTAATACATGGACTCTTG 58.956 45.833 0.00 0.00 37.41 3.02
137 138 4.051922 CTCCGTAATACATGGACTCTTGC 58.948 47.826 0.00 0.00 37.41 4.01
138 139 3.131396 CCGTAATACATGGACTCTTGCC 58.869 50.000 0.00 0.00 34.93 4.52
139 140 3.431626 CCGTAATACATGGACTCTTGCCA 60.432 47.826 0.00 0.00 40.24 4.92
140 141 4.380531 CGTAATACATGGACTCTTGCCAT 58.619 43.478 0.00 0.00 46.76 4.40
141 142 5.510690 CCGTAATACATGGACTCTTGCCATA 60.511 44.000 0.00 0.00 44.08 2.74
142 143 5.989168 CGTAATACATGGACTCTTGCCATAA 59.011 40.000 0.00 0.00 44.08 1.90
143 144 6.650807 CGTAATACATGGACTCTTGCCATAAT 59.349 38.462 0.00 0.00 44.08 1.28
144 145 7.173218 CGTAATACATGGACTCTTGCCATAATT 59.827 37.037 0.00 0.00 44.08 1.40
145 146 9.502091 GTAATACATGGACTCTTGCCATAATTA 57.498 33.333 0.00 0.00 44.08 1.40
147 148 8.798859 ATACATGGACTCTTGCCATAATTATC 57.201 34.615 0.00 0.00 44.08 1.75
148 149 5.702670 ACATGGACTCTTGCCATAATTATCG 59.297 40.000 0.00 0.00 44.08 2.92
149 150 4.641396 TGGACTCTTGCCATAATTATCGG 58.359 43.478 0.00 2.68 0.00 4.18
150 151 4.102524 TGGACTCTTGCCATAATTATCGGT 59.897 41.667 12.59 0.00 0.00 4.69
151 152 5.305902 TGGACTCTTGCCATAATTATCGGTA 59.694 40.000 12.59 7.71 0.00 4.02
152 153 5.869888 GGACTCTTGCCATAATTATCGGTAG 59.130 44.000 12.59 10.82 0.00 3.18
153 154 5.238583 ACTCTTGCCATAATTATCGGTAGC 58.761 41.667 12.59 5.43 0.00 3.58
154 155 4.242475 TCTTGCCATAATTATCGGTAGCG 58.758 43.478 8.29 8.29 0.00 4.26
155 156 3.945981 TGCCATAATTATCGGTAGCGA 57.054 42.857 20.51 20.51 0.00 4.93
156 157 4.465632 TGCCATAATTATCGGTAGCGAT 57.534 40.909 30.12 30.12 0.00 4.58
157 158 4.827692 TGCCATAATTATCGGTAGCGATT 58.172 39.130 32.04 19.02 0.00 3.34
158 159 4.868171 TGCCATAATTATCGGTAGCGATTC 59.132 41.667 32.04 13.03 0.00 2.52
159 160 5.109903 GCCATAATTATCGGTAGCGATTCT 58.890 41.667 32.04 19.34 0.00 2.40
160 161 5.581085 GCCATAATTATCGGTAGCGATTCTT 59.419 40.000 32.04 25.17 0.00 2.52
161 162 6.092259 GCCATAATTATCGGTAGCGATTCTTT 59.908 38.462 32.04 23.24 0.00 2.52
162 163 7.360946 GCCATAATTATCGGTAGCGATTCTTTT 60.361 37.037 32.04 21.22 0.00 2.27
163 164 8.169268 CCATAATTATCGGTAGCGATTCTTTTC 58.831 37.037 32.04 0.00 0.00 2.29
164 165 5.824243 ATTATCGGTAGCGATTCTTTTCG 57.176 39.130 32.04 0.00 41.99 3.46
165 166 2.642139 TCGGTAGCGATTCTTTTCGT 57.358 45.000 13.94 0.00 41.16 3.85
166 167 2.256174 TCGGTAGCGATTCTTTTCGTG 58.744 47.619 13.94 0.00 41.16 4.35
167 168 1.266891 CGGTAGCGATTCTTTTCGTGC 60.267 52.381 9.07 0.00 41.16 5.34
168 169 1.266891 GGTAGCGATTCTTTTCGTGCG 60.267 52.381 0.00 0.00 41.16 5.34
169 170 1.652124 GTAGCGATTCTTTTCGTGCGA 59.348 47.619 0.00 0.00 41.16 5.10
170 171 1.359848 AGCGATTCTTTTCGTGCGAT 58.640 45.000 0.00 0.00 41.16 4.58
171 172 1.061131 AGCGATTCTTTTCGTGCGATG 59.939 47.619 0.00 0.00 41.16 3.84
172 173 1.201921 GCGATTCTTTTCGTGCGATGT 60.202 47.619 0.00 0.00 41.16 3.06
173 174 2.421523 CGATTCTTTTCGTGCGATGTG 58.578 47.619 0.00 0.00 34.46 3.21
174 175 2.159841 CGATTCTTTTCGTGCGATGTGT 60.160 45.455 0.00 0.00 34.46 3.72
175 176 3.664276 CGATTCTTTTCGTGCGATGTGTT 60.664 43.478 0.00 0.00 34.46 3.32
176 177 3.684103 TTCTTTTCGTGCGATGTGTTT 57.316 38.095 0.00 0.00 0.00 2.83
177 178 3.684103 TCTTTTCGTGCGATGTGTTTT 57.316 38.095 0.00 0.00 0.00 2.43
178 179 3.358775 TCTTTTCGTGCGATGTGTTTTG 58.641 40.909 0.00 0.00 0.00 2.44
179 180 1.471964 TTTCGTGCGATGTGTTTTGC 58.528 45.000 0.00 0.00 0.00 3.68
180 181 0.317436 TTCGTGCGATGTGTTTTGCC 60.317 50.000 0.00 0.00 0.00 4.52
181 182 2.074353 CGTGCGATGTGTTTTGCCG 61.074 57.895 0.00 0.00 0.00 5.69
182 183 1.008995 GTGCGATGTGTTTTGCCGT 60.009 52.632 0.00 0.00 0.00 5.68
183 184 0.996727 GTGCGATGTGTTTTGCCGTC 60.997 55.000 0.00 0.00 0.00 4.79
184 185 1.792057 GCGATGTGTTTTGCCGTCG 60.792 57.895 0.00 0.00 41.73 5.12
185 186 1.856688 CGATGTGTTTTGCCGTCGA 59.143 52.632 0.00 0.00 41.42 4.20
186 187 0.179250 CGATGTGTTTTGCCGTCGAG 60.179 55.000 0.00 0.00 41.42 4.04
187 188 1.144969 GATGTGTTTTGCCGTCGAGA 58.855 50.000 0.00 0.00 0.00 4.04
188 189 1.126846 GATGTGTTTTGCCGTCGAGAG 59.873 52.381 0.00 0.00 0.00 3.20
189 190 1.204312 GTGTTTTGCCGTCGAGAGC 59.796 57.895 0.00 0.00 0.00 4.09
190 191 2.307309 TGTTTTGCCGTCGAGAGCG 61.307 57.895 0.00 0.00 39.35 5.03
191 192 2.019951 GTTTTGCCGTCGAGAGCGA 61.020 57.895 0.00 0.00 45.71 4.93
199 200 3.197614 TCGAGAGCGAGCCGAATT 58.802 55.556 0.00 0.00 42.51 2.17
200 201 1.226688 TCGAGAGCGAGCCGAATTG 60.227 57.895 0.00 0.00 42.51 2.32
201 202 2.233654 CGAGAGCGAGCCGAATTGG 61.234 63.158 0.00 0.00 40.82 3.16
210 211 4.547859 CCGAATTGGCTCTCCCTG 57.452 61.111 0.00 0.00 0.00 4.45
211 212 1.153086 CCGAATTGGCTCTCCCTGG 60.153 63.158 0.00 0.00 0.00 4.45
212 213 1.821332 CGAATTGGCTCTCCCTGGC 60.821 63.158 0.00 0.00 0.00 4.85
213 214 1.821332 GAATTGGCTCTCCCTGGCG 60.821 63.158 0.00 0.00 0.00 5.69
214 215 2.257409 GAATTGGCTCTCCCTGGCGA 62.257 60.000 0.00 0.00 0.00 5.54
215 216 2.262774 AATTGGCTCTCCCTGGCGAG 62.263 60.000 0.00 0.00 0.00 5.03
219 220 2.186384 CTCTCCCTGGCGAGCAAG 59.814 66.667 7.17 0.00 0.00 4.01
220 221 4.087892 TCTCCCTGGCGAGCAAGC 62.088 66.667 7.17 0.00 0.00 4.01
221 222 4.399395 CTCCCTGGCGAGCAAGCA 62.399 66.667 5.80 0.00 39.27 3.91
222 223 3.694058 CTCCCTGGCGAGCAAGCAT 62.694 63.158 5.80 0.00 39.27 3.79
223 224 2.753043 CCCTGGCGAGCAAGCATT 60.753 61.111 5.80 0.00 39.27 3.56
224 225 2.345760 CCCTGGCGAGCAAGCATTT 61.346 57.895 5.80 0.00 39.27 2.32
225 226 1.138247 CCTGGCGAGCAAGCATTTC 59.862 57.895 5.80 0.00 39.27 2.17
226 227 1.138247 CTGGCGAGCAAGCATTTCC 59.862 57.895 5.80 0.00 39.27 3.13
227 228 1.303561 TGGCGAGCAAGCATTTCCT 60.304 52.632 5.80 0.00 39.27 3.36
228 229 1.138247 GGCGAGCAAGCATTTCCTG 59.862 57.895 5.80 0.00 39.27 3.86
229 230 1.138247 GCGAGCAAGCATTTCCTGG 59.862 57.895 0.00 0.00 37.05 4.45
230 231 1.138247 CGAGCAAGCATTTCCTGGC 59.862 57.895 0.00 0.00 31.69 4.85
231 232 1.514553 GAGCAAGCATTTCCTGGCC 59.485 57.895 0.00 0.00 31.92 5.36
232 233 1.228956 AGCAAGCATTTCCTGGCCA 60.229 52.632 4.71 4.71 31.92 5.36
233 234 0.832983 AGCAAGCATTTCCTGGCCAA 60.833 50.000 7.01 0.00 31.92 4.52
234 235 0.390735 GCAAGCATTTCCTGGCCAAG 60.391 55.000 7.01 0.00 0.00 3.61
235 236 0.390735 CAAGCATTTCCTGGCCAAGC 60.391 55.000 7.01 4.33 0.00 4.01
236 237 1.880819 AAGCATTTCCTGGCCAAGCG 61.881 55.000 7.01 0.00 0.00 4.68
237 238 2.342650 GCATTTCCTGGCCAAGCGA 61.343 57.895 7.01 0.00 0.00 4.93
238 239 1.805254 CATTTCCTGGCCAAGCGAG 59.195 57.895 7.01 0.00 34.22 5.03
247 248 4.766970 CCAAGCGAGGCTATCTGG 57.233 61.111 0.00 0.00 38.25 3.86
248 249 1.596477 CCAAGCGAGGCTATCTGGC 60.596 63.158 0.00 0.00 45.89 4.85
255 256 3.660724 GGCTATCTGGCCCTCCAA 58.339 61.111 0.00 0.00 45.92 3.53
256 257 1.922821 GGCTATCTGGCCCTCCAAA 59.077 57.895 0.00 0.00 45.92 3.28
257 258 0.179006 GGCTATCTGGCCCTCCAAAG 60.179 60.000 0.00 0.00 45.92 2.77
258 259 0.821301 GCTATCTGGCCCTCCAAAGC 60.821 60.000 0.00 0.00 42.91 3.51
259 260 0.533755 CTATCTGGCCCTCCAAAGCG 60.534 60.000 0.00 0.00 42.91 4.68
260 261 0.980754 TATCTGGCCCTCCAAAGCGA 60.981 55.000 0.00 0.00 42.91 4.93
261 262 2.262774 ATCTGGCCCTCCAAAGCGAG 62.263 60.000 0.00 0.00 42.91 5.03
262 263 3.249189 TGGCCCTCCAAAGCGAGT 61.249 61.111 0.00 0.00 39.99 4.18
263 264 2.034221 GGCCCTCCAAAGCGAGTT 59.966 61.111 0.00 0.00 0.00 3.01
264 265 1.603739 GGCCCTCCAAAGCGAGTTT 60.604 57.895 0.00 0.00 0.00 2.66
265 266 0.322187 GGCCCTCCAAAGCGAGTTTA 60.322 55.000 0.00 0.00 0.00 2.01
266 267 1.682087 GGCCCTCCAAAGCGAGTTTAT 60.682 52.381 0.00 0.00 0.00 1.40
267 268 2.092323 GCCCTCCAAAGCGAGTTTATT 58.908 47.619 0.00 0.00 0.00 1.40
268 269 2.492088 GCCCTCCAAAGCGAGTTTATTT 59.508 45.455 0.00 0.00 0.00 1.40
269 270 3.056821 GCCCTCCAAAGCGAGTTTATTTT 60.057 43.478 0.00 0.00 0.00 1.82
270 271 4.157105 GCCCTCCAAAGCGAGTTTATTTTA 59.843 41.667 0.00 0.00 0.00 1.52
271 272 5.676331 GCCCTCCAAAGCGAGTTTATTTTAG 60.676 44.000 0.00 0.00 0.00 1.85
272 273 5.163652 CCCTCCAAAGCGAGTTTATTTTAGG 60.164 44.000 0.00 0.00 0.00 2.69
273 274 5.163652 CCTCCAAAGCGAGTTTATTTTAGGG 60.164 44.000 0.00 0.00 0.00 3.53
274 275 5.562635 TCCAAAGCGAGTTTATTTTAGGGA 58.437 37.500 0.00 0.00 0.00 4.20
275 276 6.005198 TCCAAAGCGAGTTTATTTTAGGGAA 58.995 36.000 0.00 0.00 0.00 3.97
276 277 6.490721 TCCAAAGCGAGTTTATTTTAGGGAAA 59.509 34.615 0.00 0.00 0.00 3.13
277 278 6.584942 CCAAAGCGAGTTTATTTTAGGGAAAC 59.415 38.462 0.00 0.00 34.05 2.78
294 295 3.373130 GGAAACCAAACACGTATCCTAGC 59.627 47.826 0.00 0.00 0.00 3.42
295 296 2.685850 ACCAAACACGTATCCTAGCC 57.314 50.000 0.00 0.00 0.00 3.93
296 297 1.208776 ACCAAACACGTATCCTAGCCC 59.791 52.381 0.00 0.00 0.00 5.19
297 298 1.208535 CCAAACACGTATCCTAGCCCA 59.791 52.381 0.00 0.00 0.00 5.36
298 299 2.550978 CAAACACGTATCCTAGCCCAG 58.449 52.381 0.00 0.00 0.00 4.45
299 300 0.464452 AACACGTATCCTAGCCCAGC 59.536 55.000 0.00 0.00 0.00 4.85
300 301 1.007271 CACGTATCCTAGCCCAGCG 60.007 63.158 0.00 0.00 0.00 5.18
301 302 1.152819 ACGTATCCTAGCCCAGCGA 60.153 57.895 0.00 0.00 0.00 4.93
302 303 1.173444 ACGTATCCTAGCCCAGCGAG 61.173 60.000 0.00 0.00 0.00 5.03
312 313 1.006102 CCCAGCGAGGCTATAACCG 60.006 63.158 0.00 0.00 36.40 4.44
313 314 1.740285 CCAGCGAGGCTATAACCGT 59.260 57.895 0.00 0.00 36.40 4.83
314 315 0.104304 CCAGCGAGGCTATAACCGTT 59.896 55.000 0.00 0.00 36.40 4.44
315 316 1.472728 CCAGCGAGGCTATAACCGTTT 60.473 52.381 0.00 0.00 36.40 3.60
316 317 2.277084 CAGCGAGGCTATAACCGTTTT 58.723 47.619 0.00 0.00 36.40 2.43
317 318 2.676342 CAGCGAGGCTATAACCGTTTTT 59.324 45.455 0.00 0.00 36.40 1.94
318 319 2.676342 AGCGAGGCTATAACCGTTTTTG 59.324 45.455 0.00 0.00 36.99 2.44
319 320 2.674357 GCGAGGCTATAACCGTTTTTGA 59.326 45.455 0.00 0.00 33.69 2.69
320 321 3.484721 GCGAGGCTATAACCGTTTTTGAC 60.485 47.826 0.00 0.00 33.69 3.18
332 333 4.220382 CGTTTTTGACGTGAAACCAAAC 57.780 40.909 0.00 1.73 46.49 2.93
333 334 3.241084 CGTTTTTGACGTGAAACCAAACG 60.241 43.478 17.11 17.11 46.49 3.60
416 417 0.824759 GGGGTCGTATGTGAGAAGCT 59.175 55.000 0.00 0.00 0.00 3.74
429 430 5.186198 TGTGAGAAGCTAGAAATTAAGCCC 58.814 41.667 0.00 0.00 39.64 5.19
468 469 2.527442 CGAGGCATCGTTTCCTTTTC 57.473 50.000 13.51 0.00 44.09 2.29
508 509 2.056223 GCACAGCATGGCTCCCATT 61.056 57.895 0.00 0.00 42.23 3.16
509 510 1.610554 GCACAGCATGGCTCCCATTT 61.611 55.000 0.00 0.00 42.23 2.32
510 511 0.174845 CACAGCATGGCTCCCATTTG 59.825 55.000 0.00 0.00 42.23 2.32
511 512 1.143183 CAGCATGGCTCCCATTTGC 59.857 57.895 0.00 2.42 42.23 3.68
541 600 3.640257 CTGCTGCCCATGGTGAGCT 62.640 63.158 25.08 0.00 33.46 4.09
542 601 2.827642 GCTGCCCATGGTGAGCTC 60.828 66.667 20.17 6.82 30.90 4.09
543 602 2.996395 CTGCCCATGGTGAGCTCT 59.004 61.111 16.19 0.00 0.00 4.09
544 603 1.302285 CTGCCCATGGTGAGCTCTT 59.698 57.895 16.19 0.00 0.00 2.85
545 604 0.747283 CTGCCCATGGTGAGCTCTTC 60.747 60.000 16.19 8.05 0.00 2.87
546 605 1.452833 GCCCATGGTGAGCTCTTCC 60.453 63.158 16.19 16.97 0.00 3.46
547 606 1.993653 CCCATGGTGAGCTCTTCCA 59.006 57.895 25.11 25.11 35.64 3.53
548 607 0.549950 CCCATGGTGAGCTCTTCCAT 59.450 55.000 26.63 26.63 41.88 3.41
551 610 0.549950 ATGGTGAGCTCTTCCATGGG 59.450 55.000 29.38 0.00 40.00 4.00
552 611 0.842030 TGGTGAGCTCTTCCATGGGT 60.842 55.000 21.27 0.00 0.00 4.51
553 612 1.204146 GGTGAGCTCTTCCATGGGTA 58.796 55.000 16.19 0.00 0.00 3.69
554 613 1.134371 GGTGAGCTCTTCCATGGGTAC 60.134 57.143 16.19 0.00 0.00 3.34
604 663 1.757574 CCAGTTTGTGCATCGTTGTG 58.242 50.000 0.00 0.00 0.00 3.33
605 664 1.065401 CCAGTTTGTGCATCGTTGTGT 59.935 47.619 0.00 0.00 0.00 3.72
606 665 2.479389 CCAGTTTGTGCATCGTTGTGTT 60.479 45.455 0.00 0.00 0.00 3.32
607 666 2.531103 CAGTTTGTGCATCGTTGTGTTG 59.469 45.455 0.00 0.00 0.00 3.33
608 667 2.421775 AGTTTGTGCATCGTTGTGTTGA 59.578 40.909 0.00 0.00 0.00 3.18
609 668 2.466870 TTGTGCATCGTTGTGTTGAC 57.533 45.000 0.00 0.00 0.00 3.18
610 669 1.662517 TGTGCATCGTTGTGTTGACT 58.337 45.000 0.00 0.00 0.00 3.41
611 670 2.013400 TGTGCATCGTTGTGTTGACTT 58.987 42.857 0.00 0.00 0.00 3.01
612 671 2.421775 TGTGCATCGTTGTGTTGACTTT 59.578 40.909 0.00 0.00 0.00 2.66
613 672 2.783284 GTGCATCGTTGTGTTGACTTTG 59.217 45.455 0.00 0.00 0.00 2.77
614 673 2.223456 TGCATCGTTGTGTTGACTTTGG 60.223 45.455 0.00 0.00 0.00 3.28
615 674 2.858260 GCATCGTTGTGTTGACTTTGGG 60.858 50.000 0.00 0.00 0.00 4.12
616 675 1.384525 TCGTTGTGTTGACTTTGGGG 58.615 50.000 0.00 0.00 0.00 4.96
617 676 0.383949 CGTTGTGTTGACTTTGGGGG 59.616 55.000 0.00 0.00 0.00 5.40
618 677 0.104120 GTTGTGTTGACTTTGGGGGC 59.896 55.000 0.00 0.00 0.00 5.80
619 678 0.324738 TTGTGTTGACTTTGGGGGCA 60.325 50.000 0.00 0.00 0.00 5.36
620 679 0.754957 TGTGTTGACTTTGGGGGCAG 60.755 55.000 0.00 0.00 0.00 4.85
621 680 1.152567 TGTTGACTTTGGGGGCAGG 60.153 57.895 0.00 0.00 0.00 4.85
1101 1160 3.518998 GGCGTGCGAGAGAGCCTA 61.519 66.667 0.00 0.00 41.95 3.93
1145 1204 1.134159 CAGCTTTGCTAGGCAGAGGAT 60.134 52.381 4.93 0.00 40.46 3.24
1263 1322 3.081804 GGACGATGTGGAGGAACAAATT 58.918 45.455 0.00 0.00 32.81 1.82
1357 1416 6.045955 ACGCCTAGTACTAGTACTACTTGTC 58.954 44.000 30.50 15.51 43.98 3.18
1474 1533 6.605594 TGAACCAAGGAATGTTCTTGTTAACT 59.394 34.615 7.22 0.00 41.10 2.24
1848 1914 4.378770 CGCATTGTGATATCAAGCCATACC 60.379 45.833 7.07 0.00 0.00 2.73
1849 1915 4.520111 GCATTGTGATATCAAGCCATACCA 59.480 41.667 7.07 0.00 0.00 3.25
1850 1916 5.335426 GCATTGTGATATCAAGCCATACCAG 60.335 44.000 7.07 0.00 0.00 4.00
1873 1939 5.126545 AGCCAATACGTACTGATGTTCACTA 59.873 40.000 5.43 0.00 0.00 2.74
1876 1942 7.114529 GCCAATACGTACTGATGTTCACTATAC 59.885 40.741 5.43 0.00 0.00 1.47
1979 2045 6.072508 TGCTTTGCCTAATAAAGACAAGTCTG 60.073 38.462 3.08 0.00 40.36 3.51
2210 2276 6.348540 GGCCATAACTATTACAGCTGCATTAC 60.349 42.308 15.27 0.00 0.00 1.89
2372 2438 6.538742 TGGAAATCGTACCATCAAGAAAGATC 59.461 38.462 0.00 0.00 0.00 2.75
2373 2439 6.538742 GGAAATCGTACCATCAAGAAAGATCA 59.461 38.462 0.00 0.00 0.00 2.92
2501 2567 4.886489 TGATTCAACCGGCATTTGATGATA 59.114 37.500 0.00 0.00 33.03 2.15
2551 2617 6.638610 TGTTCATGGTGTTGTTCTTGATTTT 58.361 32.000 0.00 0.00 0.00 1.82
2564 2630 8.648698 TGTTCTTGATTTTATGGAATCCTTGA 57.351 30.769 0.00 0.00 35.61 3.02
2875 2944 3.097614 ACTTGTACGGGTGCTAGATCTT 58.902 45.455 0.00 0.00 0.00 2.40
2887 2956 5.982516 GGTGCTAGATCTTAGTGATGTCAAG 59.017 44.000 0.00 0.00 35.14 3.02
2888 2957 5.461737 GTGCTAGATCTTAGTGATGTCAAGC 59.538 44.000 0.00 0.00 35.14 4.01
2896 2965 0.727122 GTGATGTCAAGCGCTTGCAC 60.727 55.000 38.89 33.68 42.66 4.57
3062 3131 1.834188 ACCAGAATTTAAGGGCACGG 58.166 50.000 0.00 0.00 0.00 4.94
3063 3132 1.102978 CCAGAATTTAAGGGCACGGG 58.897 55.000 0.00 0.00 0.00 5.28
3340 3409 6.018751 GGAAATCAAACTTGCAGTTCCTTTTC 60.019 38.462 10.90 9.93 37.47 2.29
3536 3605 5.422012 TCAATAGTAGATGCAGAAGGTGTCA 59.578 40.000 0.00 0.00 0.00 3.58
3577 3646 6.780522 TGCCAAAGTTAGTCCTCCTAAAATTT 59.219 34.615 0.00 0.00 37.39 1.82
3927 4008 5.189180 GGTATCCAGCATTTCTCTTGTCTT 58.811 41.667 0.00 0.00 0.00 3.01
4050 4134 4.702131 CCCCTACTGGAATTCAACAGAAAG 59.298 45.833 15.93 12.29 38.09 2.62
4230 4317 1.696336 TCCAGCATCATAGCTCCCTTC 59.304 52.381 0.00 0.00 44.54 3.46
4250 4337 1.129998 CTTTGCTCATCTCGCCAACAG 59.870 52.381 0.00 0.00 0.00 3.16
4458 4545 1.490693 AATGATACGGCGCTTGCTCG 61.491 55.000 6.90 4.04 39.13 5.03
4474 4561 0.249120 CTCGCCCCGGCATTCATATA 59.751 55.000 6.52 0.00 42.06 0.86
4720 4823 5.391736 CCTCCTCTATGCTACGTATAAACCG 60.392 48.000 0.00 0.00 0.00 4.44
4844 4948 6.420903 TCGCTCATATACATCTGTTTTGTAGC 59.579 38.462 0.00 0.00 33.36 3.58
4847 4951 9.261180 GCTCATATACATCTGTTTTGTAGCTAA 57.739 33.333 0.00 0.00 33.36 3.09
4894 4998 7.254932 CGGTTCATCTGATATATATCTCGCTCA 60.255 40.741 20.74 3.31 33.88 4.26
4919 5023 5.675684 TGCATCTGTACAGACTTGGATAA 57.324 39.130 27.41 2.50 40.75 1.75
4940 5044 4.248691 AGAAGCCTCAAATGCAGTTTTC 57.751 40.909 0.00 0.00 0.00 2.29
4945 5049 3.668656 GCCTCAAATGCAGTTTTCGTAAC 59.331 43.478 0.00 0.00 0.00 2.50
4988 5092 7.531857 ACATCTCTTCTCTGACTGTTTTCTA 57.468 36.000 0.00 0.00 0.00 2.10
5022 5126 0.657840 GCATGTTGTGTAGATCGCCC 59.342 55.000 0.00 0.00 0.00 6.13
5058 5162 0.527817 GTAGTGATCGGTTGCGAGGG 60.528 60.000 0.00 0.00 0.00 4.30
5063 5169 0.446616 GATCGGTTGCGAGGGTTTTC 59.553 55.000 0.00 0.00 0.00 2.29
5066 5172 0.666374 CGGTTGCGAGGGTTTTCTTT 59.334 50.000 0.00 0.00 0.00 2.52
5130 5236 1.012486 GCCGAACAGAATTCGACCGT 61.012 55.000 10.46 0.00 43.97 4.83
5132 5238 1.667756 CCGAACAGAATTCGACCGTGA 60.668 52.381 10.46 0.00 43.97 4.35
5137 5243 3.724374 ACAGAATTCGACCGTGAAAGAA 58.276 40.909 0.00 0.00 0.00 2.52
5170 5276 0.105913 AAGGGAAACTGGGCCGAAAA 60.106 50.000 0.00 0.00 0.00 2.29
5237 5343 7.140304 AGGTAGGGTTATGAGGTCTAGAAAAT 58.860 38.462 0.00 0.00 0.00 1.82
5239 5345 8.931568 GGTAGGGTTATGAGGTCTAGAAAATTA 58.068 37.037 0.00 0.00 0.00 1.40
5240 5346 9.984190 GTAGGGTTATGAGGTCTAGAAAATTAG 57.016 37.037 0.00 0.00 0.00 1.73
5241 5347 7.510407 AGGGTTATGAGGTCTAGAAAATTAGC 58.490 38.462 0.00 0.00 0.00 3.09
5242 5348 7.127339 AGGGTTATGAGGTCTAGAAAATTAGCA 59.873 37.037 0.00 0.00 0.00 3.49
5287 5393 4.019858 TCATCTGATCCAGAAACGAGAGT 58.980 43.478 0.43 0.00 44.04 3.24
5308 5414 2.940158 ACCCAAACCCAAAGTCACTAC 58.060 47.619 0.00 0.00 0.00 2.73
5338 5444 3.064207 TCTCAAATACGACCTGCACAAC 58.936 45.455 0.00 0.00 0.00 3.32
5339 5445 2.805671 CTCAAATACGACCTGCACAACA 59.194 45.455 0.00 0.00 0.00 3.33
5340 5446 2.805671 TCAAATACGACCTGCACAACAG 59.194 45.455 0.00 0.00 46.77 3.16
5356 5462 2.191128 ACAGAAAGTTGCAGCCTAGG 57.809 50.000 3.67 3.67 0.00 3.02
5357 5463 1.699634 ACAGAAAGTTGCAGCCTAGGA 59.300 47.619 14.75 0.00 0.00 2.94
5358 5464 2.079925 CAGAAAGTTGCAGCCTAGGAC 58.920 52.381 14.75 3.76 0.00 3.85
5359 5465 1.079503 GAAAGTTGCAGCCTAGGACG 58.920 55.000 14.75 2.80 0.00 4.79
5360 5466 0.685097 AAAGTTGCAGCCTAGGACGA 59.315 50.000 14.75 0.00 0.00 4.20
5361 5467 0.247736 AAGTTGCAGCCTAGGACGAG 59.752 55.000 14.75 3.88 0.00 4.18
5362 5468 1.811679 GTTGCAGCCTAGGACGAGC 60.812 63.158 14.75 13.52 0.00 5.03
5363 5469 1.984570 TTGCAGCCTAGGACGAGCT 60.985 57.895 14.75 0.00 37.32 4.09
5364 5470 0.683179 TTGCAGCCTAGGACGAGCTA 60.683 55.000 14.75 8.08 34.38 3.32
5365 5471 1.360911 GCAGCCTAGGACGAGCTAC 59.639 63.158 14.75 0.00 34.38 3.58
5367 5473 2.188161 AGCCTAGGACGAGCTACGC 61.188 63.158 14.75 0.00 46.94 4.42
5368 5474 2.632541 CCTAGGACGAGCTACGCG 59.367 66.667 1.05 3.53 46.94 6.01
5369 5475 2.632541 CTAGGACGAGCTACGCGG 59.367 66.667 12.47 0.00 46.94 6.46
5370 5476 2.124983 TAGGACGAGCTACGCGGT 60.125 61.111 12.47 0.00 46.94 5.68
5371 5477 0.877649 CTAGGACGAGCTACGCGGTA 60.878 60.000 12.47 0.00 46.94 4.02
5372 5478 1.154205 TAGGACGAGCTACGCGGTAC 61.154 60.000 12.47 0.00 46.94 3.34
5373 5479 2.023882 GACGAGCTACGCGGTACC 59.976 66.667 12.47 0.16 46.94 3.34
5374 5480 3.460854 GACGAGCTACGCGGTACCC 62.461 68.421 12.47 0.00 46.94 3.69
5385 5491 3.953201 CGGTACCCGTTATCCAGAC 57.047 57.895 6.25 0.00 42.73 3.51
5386 5492 0.386838 CGGTACCCGTTATCCAGACC 59.613 60.000 6.25 0.00 42.73 3.85
5387 5493 0.386838 GGTACCCGTTATCCAGACCG 59.613 60.000 0.00 0.00 0.00 4.79
5388 5494 1.106285 GTACCCGTTATCCAGACCGT 58.894 55.000 0.00 0.00 0.00 4.83
5389 5495 1.478105 GTACCCGTTATCCAGACCGTT 59.522 52.381 0.00 0.00 0.00 4.44
5390 5496 0.533951 ACCCGTTATCCAGACCGTTC 59.466 55.000 0.00 0.00 0.00 3.95
5391 5497 0.179092 CCCGTTATCCAGACCGTTCC 60.179 60.000 0.00 0.00 0.00 3.62
5392 5498 0.179092 CCGTTATCCAGACCGTTCCC 60.179 60.000 0.00 0.00 0.00 3.97
5393 5499 0.822164 CGTTATCCAGACCGTTCCCT 59.178 55.000 0.00 0.00 0.00 4.20
5394 5500 1.202382 CGTTATCCAGACCGTTCCCTC 60.202 57.143 0.00 0.00 0.00 4.30
5395 5501 1.108776 TTATCCAGACCGTTCCCTCG 58.891 55.000 0.00 0.00 0.00 4.63
5396 5502 1.389609 TATCCAGACCGTTCCCTCGC 61.390 60.000 0.00 0.00 0.00 5.03
5397 5503 4.796231 CCAGACCGTTCCCTCGCG 62.796 72.222 0.00 0.00 0.00 5.87
5398 5504 4.052229 CAGACCGTTCCCTCGCGT 62.052 66.667 5.77 0.00 0.00 6.01
5399 5505 3.745803 AGACCGTTCCCTCGCGTC 61.746 66.667 5.77 0.00 34.13 5.19
5403 5509 4.394078 CGTTCCCTCGCGTCGTGA 62.394 66.667 5.77 8.42 0.00 4.35
5404 5510 2.181021 GTTCCCTCGCGTCGTGAT 59.819 61.111 9.25 0.00 0.00 3.06
5405 5511 1.872679 GTTCCCTCGCGTCGTGATC 60.873 63.158 9.25 0.00 0.00 2.92
5406 5512 3.060020 TTCCCTCGCGTCGTGATCC 62.060 63.158 9.25 0.00 0.00 3.36
5407 5513 4.907034 CCCTCGCGTCGTGATCCG 62.907 72.222 9.25 0.00 38.13 4.18
5408 5514 4.175489 CCTCGCGTCGTGATCCGT 62.175 66.667 9.25 0.00 37.94 4.69
5409 5515 2.944557 CTCGCGTCGTGATCCGTG 60.945 66.667 9.25 0.00 37.94 4.94
5413 5519 2.803670 CGTCGTGATCCGTGCGTT 60.804 61.111 3.97 0.00 37.94 4.84
5414 5520 2.769617 GTCGTGATCCGTGCGTTG 59.230 61.111 3.97 0.00 37.94 4.10
5415 5521 2.019951 GTCGTGATCCGTGCGTTGT 61.020 57.895 3.97 0.00 37.94 3.32
5416 5522 1.300311 TCGTGATCCGTGCGTTGTT 60.300 52.632 3.97 0.00 37.94 2.83
5417 5523 0.876777 TCGTGATCCGTGCGTTGTTT 60.877 50.000 3.97 0.00 37.94 2.83
5418 5524 0.721155 CGTGATCCGTGCGTTGTTTG 60.721 55.000 0.00 0.00 0.00 2.93
5419 5525 0.584396 GTGATCCGTGCGTTGTTTGA 59.416 50.000 0.00 0.00 0.00 2.69
5420 5526 0.584396 TGATCCGTGCGTTGTTTGAC 59.416 50.000 0.00 0.00 0.00 3.18
5421 5527 0.110373 GATCCGTGCGTTGTTTGACC 60.110 55.000 0.00 0.00 0.00 4.02
5422 5528 1.837538 ATCCGTGCGTTGTTTGACCG 61.838 55.000 0.00 0.00 0.00 4.79
5423 5529 2.526993 CCGTGCGTTGTTTGACCGA 61.527 57.895 0.00 0.00 0.00 4.69
5424 5530 1.367195 CGTGCGTTGTTTGACCGAC 60.367 57.895 0.00 0.00 0.00 4.79
5425 5531 1.716760 GTGCGTTGTTTGACCGACA 59.283 52.632 0.00 0.00 0.00 4.35
5426 5532 0.097325 GTGCGTTGTTTGACCGACAA 59.903 50.000 0.00 0.00 34.83 3.18
5429 5535 2.849521 GTTGTTTGACCGACAACGC 58.150 52.632 4.60 0.00 44.91 4.84
5430 5536 0.097325 GTTGTTTGACCGACAACGCA 59.903 50.000 4.60 0.00 44.91 5.24
5431 5537 1.018148 TTGTTTGACCGACAACGCAT 58.982 45.000 0.00 0.00 38.29 4.73
5432 5538 0.306228 TGTTTGACCGACAACGCATG 59.694 50.000 0.00 0.00 38.29 4.06
5433 5539 5.849635 GTTGTTTGACCGACAACGCATGT 62.850 47.826 4.60 0.00 44.91 3.21
5434 5540 0.306228 TTTGACCGACAACGCATGTG 59.694 50.000 4.30 4.30 44.12 3.21
5435 5541 2.111932 TTGACCGACAACGCATGTGC 62.112 55.000 6.08 0.00 44.12 4.57
5436 5542 2.590291 ACCGACAACGCATGTGCA 60.590 55.556 6.08 0.00 44.12 4.57
5437 5543 1.911293 GACCGACAACGCATGTGCAT 61.911 55.000 6.08 0.00 44.12 3.96
5438 5544 1.512522 CCGACAACGCATGTGCATG 60.513 57.895 6.08 8.58 44.12 4.06
5439 5545 1.207339 CGACAACGCATGTGCATGT 59.793 52.632 15.72 15.72 44.12 3.21
5440 5546 0.790495 CGACAACGCATGTGCATGTC 60.790 55.000 24.93 24.93 44.12 3.06
5441 5547 0.454957 GACAACGCATGTGCATGTCC 60.455 55.000 24.61 13.21 44.71 4.02
5442 5548 1.171549 ACAACGCATGTGCATGTCCA 61.172 50.000 6.08 0.00 41.93 4.02
5443 5549 0.730155 CAACGCATGTGCATGTCCAC 60.730 55.000 6.08 0.00 42.21 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.267974 GGCAAAGCCGAGTTGAGG 58.732 61.111 0.00 0.00 39.62 3.86
20 21 3.379445 CAAGCAGCCCAGGCAAGG 61.379 66.667 12.03 0.96 44.88 3.61
21 22 1.751349 AAACAAGCAGCCCAGGCAAG 61.751 55.000 12.03 4.06 44.88 4.01
22 23 1.761667 AAACAAGCAGCCCAGGCAA 60.762 52.632 12.03 0.00 44.88 4.52
23 24 2.123338 AAACAAGCAGCCCAGGCA 60.123 55.556 12.03 0.00 44.88 4.75
24 25 2.341176 CAAACAAGCAGCCCAGGC 59.659 61.111 0.00 0.00 42.33 4.85
25 26 1.402107 AACCAAACAAGCAGCCCAGG 61.402 55.000 0.00 0.00 0.00 4.45
26 27 1.327303 TAACCAAACAAGCAGCCCAG 58.673 50.000 0.00 0.00 0.00 4.45
27 28 2.008242 ATAACCAAACAAGCAGCCCA 57.992 45.000 0.00 0.00 0.00 5.36
28 29 3.401033 AAATAACCAAACAAGCAGCCC 57.599 42.857 0.00 0.00 0.00 5.19
29 30 4.631131 AGAAAATAACCAAACAAGCAGCC 58.369 39.130 0.00 0.00 0.00 4.85
30 31 6.603237 AAAGAAAATAACCAAACAAGCAGC 57.397 33.333 0.00 0.00 0.00 5.25
31 32 6.906678 GCAAAAGAAAATAACCAAACAAGCAG 59.093 34.615 0.00 0.00 0.00 4.24
32 33 6.597280 AGCAAAAGAAAATAACCAAACAAGCA 59.403 30.769 0.00 0.00 0.00 3.91
33 34 6.906678 CAGCAAAAGAAAATAACCAAACAAGC 59.093 34.615 0.00 0.00 0.00 4.01
34 35 7.279758 TCCAGCAAAAGAAAATAACCAAACAAG 59.720 33.333 0.00 0.00 0.00 3.16
35 36 7.106239 TCCAGCAAAAGAAAATAACCAAACAA 58.894 30.769 0.00 0.00 0.00 2.83
36 37 6.644347 TCCAGCAAAAGAAAATAACCAAACA 58.356 32.000 0.00 0.00 0.00 2.83
37 38 6.761242 ACTCCAGCAAAAGAAAATAACCAAAC 59.239 34.615 0.00 0.00 0.00 2.93
38 39 6.883744 ACTCCAGCAAAAGAAAATAACCAAA 58.116 32.000 0.00 0.00 0.00 3.28
39 40 6.478512 ACTCCAGCAAAAGAAAATAACCAA 57.521 33.333 0.00 0.00 0.00 3.67
40 41 7.775053 ATACTCCAGCAAAAGAAAATAACCA 57.225 32.000 0.00 0.00 0.00 3.67
52 53 9.439500 ACGTATTAAGTTTTATACTCCAGCAAA 57.561 29.630 0.00 0.00 35.54 3.68
54 55 9.520204 GTACGTATTAAGTTTTATACTCCAGCA 57.480 33.333 0.00 0.00 35.54 4.41
55 56 9.741647 AGTACGTATTAAGTTTTATACTCCAGC 57.258 33.333 0.00 0.00 35.54 4.85
74 75 8.505625 GGTTTGATTTGTTATGGAAAGTACGTA 58.494 33.333 0.00 0.00 0.00 3.57
75 76 7.364970 GGTTTGATTTGTTATGGAAAGTACGT 58.635 34.615 0.00 0.00 0.00 3.57
76 77 6.521821 CGGTTTGATTTGTTATGGAAAGTACG 59.478 38.462 0.00 0.00 0.00 3.67
77 78 7.325097 CACGGTTTGATTTGTTATGGAAAGTAC 59.675 37.037 0.00 0.00 0.00 2.73
78 79 7.364200 CACGGTTTGATTTGTTATGGAAAGTA 58.636 34.615 0.00 0.00 0.00 2.24
79 80 6.212955 CACGGTTTGATTTGTTATGGAAAGT 58.787 36.000 0.00 0.00 0.00 2.66
80 81 5.118510 GCACGGTTTGATTTGTTATGGAAAG 59.881 40.000 0.00 0.00 0.00 2.62
81 82 4.985409 GCACGGTTTGATTTGTTATGGAAA 59.015 37.500 0.00 0.00 0.00 3.13
82 83 4.551388 GCACGGTTTGATTTGTTATGGAA 58.449 39.130 0.00 0.00 0.00 3.53
83 84 3.057174 GGCACGGTTTGATTTGTTATGGA 60.057 43.478 0.00 0.00 0.00 3.41
84 85 3.249917 GGCACGGTTTGATTTGTTATGG 58.750 45.455 0.00 0.00 0.00 2.74
85 86 3.906998 TGGCACGGTTTGATTTGTTATG 58.093 40.909 0.00 0.00 0.00 1.90
86 87 4.799564 ATGGCACGGTTTGATTTGTTAT 57.200 36.364 0.00 0.00 0.00 1.89
87 88 5.906113 ATATGGCACGGTTTGATTTGTTA 57.094 34.783 0.00 0.00 0.00 2.41
88 89 4.799564 ATATGGCACGGTTTGATTTGTT 57.200 36.364 0.00 0.00 0.00 2.83
89 90 6.544197 TGTATATATGGCACGGTTTGATTTGT 59.456 34.615 0.00 0.00 0.00 2.83
90 91 6.855914 GTGTATATATGGCACGGTTTGATTTG 59.144 38.462 0.00 0.00 0.00 2.32
91 92 6.770785 AGTGTATATATGGCACGGTTTGATTT 59.229 34.615 13.17 0.00 38.10 2.17
92 93 6.296026 AGTGTATATATGGCACGGTTTGATT 58.704 36.000 13.17 0.00 38.10 2.57
93 94 5.865085 AGTGTATATATGGCACGGTTTGAT 58.135 37.500 13.17 0.00 38.10 2.57
94 95 5.284861 AGTGTATATATGGCACGGTTTGA 57.715 39.130 13.17 0.00 38.10 2.69
95 96 4.451096 GGAGTGTATATATGGCACGGTTTG 59.549 45.833 13.17 0.00 38.10 2.93
96 97 4.638304 GGAGTGTATATATGGCACGGTTT 58.362 43.478 13.17 1.31 38.10 3.27
97 98 3.305813 CGGAGTGTATATATGGCACGGTT 60.306 47.826 13.17 1.57 38.10 4.44
98 99 2.230508 CGGAGTGTATATATGGCACGGT 59.769 50.000 13.17 2.09 38.10 4.83
99 100 2.230508 ACGGAGTGTATATATGGCACGG 59.769 50.000 13.17 10.44 42.51 4.94
100 101 3.570926 ACGGAGTGTATATATGGCACG 57.429 47.619 13.17 7.40 42.51 5.34
101 102 7.541162 TGTATTACGGAGTGTATATATGGCAC 58.459 38.462 11.86 11.86 45.73 5.01
102 103 7.706100 TGTATTACGGAGTGTATATATGGCA 57.294 36.000 0.00 0.00 45.73 4.92
103 104 7.652105 CCATGTATTACGGAGTGTATATATGGC 59.348 40.741 13.87 0.00 43.41 4.40
104 105 8.909923 TCCATGTATTACGGAGTGTATATATGG 58.090 37.037 16.94 16.94 46.45 2.74
105 106 9.731819 GTCCATGTATTACGGAGTGTATATATG 57.268 37.037 0.00 0.00 45.73 1.78
106 107 9.696572 AGTCCATGTATTACGGAGTGTATATAT 57.303 33.333 0.00 0.00 45.73 0.86
107 108 9.170734 GAGTCCATGTATTACGGAGTGTATATA 57.829 37.037 3.60 0.00 45.73 0.86
108 109 7.889073 AGAGTCCATGTATTACGGAGTGTATAT 59.111 37.037 3.60 0.00 45.73 0.86
109 110 7.229308 AGAGTCCATGTATTACGGAGTGTATA 58.771 38.462 3.60 0.00 45.73 1.47
110 111 6.069331 AGAGTCCATGTATTACGGAGTGTAT 58.931 40.000 3.60 0.00 45.73 2.29
111 112 5.443283 AGAGTCCATGTATTACGGAGTGTA 58.557 41.667 3.60 0.00 45.73 2.90
112 113 4.279145 AGAGTCCATGTATTACGGAGTGT 58.721 43.478 3.60 0.00 45.73 3.55
113 114 4.920640 AGAGTCCATGTATTACGGAGTG 57.079 45.455 3.60 0.00 45.73 3.51
115 116 4.051922 GCAAGAGTCCATGTATTACGGAG 58.948 47.826 0.00 0.00 0.00 4.63
116 117 3.181469 GGCAAGAGTCCATGTATTACGGA 60.181 47.826 0.00 0.00 0.00 4.69
117 118 3.131396 GGCAAGAGTCCATGTATTACGG 58.869 50.000 0.00 0.00 0.00 4.02
118 119 3.792401 TGGCAAGAGTCCATGTATTACG 58.208 45.455 0.00 0.00 0.00 3.18
119 120 7.986085 ATTATGGCAAGAGTCCATGTATTAC 57.014 36.000 4.88 0.00 43.67 1.89
121 122 9.236006 GATAATTATGGCAAGAGTCCATGTATT 57.764 33.333 1.78 6.97 43.67 1.89
122 123 7.550551 CGATAATTATGGCAAGAGTCCATGTAT 59.449 37.037 1.78 1.09 43.67 2.29
123 124 6.873605 CGATAATTATGGCAAGAGTCCATGTA 59.126 38.462 1.78 0.00 43.67 2.29
124 125 5.702670 CGATAATTATGGCAAGAGTCCATGT 59.297 40.000 1.78 0.00 43.67 3.21
125 126 5.122869 CCGATAATTATGGCAAGAGTCCATG 59.877 44.000 1.78 0.00 43.67 3.66
126 127 5.221925 ACCGATAATTATGGCAAGAGTCCAT 60.222 40.000 1.78 0.00 45.60 3.41
127 128 4.102524 ACCGATAATTATGGCAAGAGTCCA 59.897 41.667 1.78 0.00 38.09 4.02
128 129 4.642429 ACCGATAATTATGGCAAGAGTCC 58.358 43.478 1.78 0.00 0.00 3.85
129 130 5.348997 GCTACCGATAATTATGGCAAGAGTC 59.651 44.000 1.78 0.00 0.00 3.36
130 131 5.238583 GCTACCGATAATTATGGCAAGAGT 58.761 41.667 1.78 0.00 0.00 3.24
131 132 4.327357 CGCTACCGATAATTATGGCAAGAG 59.673 45.833 1.78 4.99 36.29 2.85
132 133 4.021807 TCGCTACCGATAATTATGGCAAGA 60.022 41.667 1.78 1.72 38.82 3.02
133 134 4.242475 TCGCTACCGATAATTATGGCAAG 58.758 43.478 1.78 7.37 38.82 4.01
134 135 4.260139 TCGCTACCGATAATTATGGCAA 57.740 40.909 1.78 0.00 38.82 4.52
135 136 3.945981 TCGCTACCGATAATTATGGCA 57.054 42.857 1.78 0.00 38.82 4.92
146 147 2.256174 CACGAAAAGAATCGCTACCGA 58.744 47.619 0.00 0.00 46.51 4.69
147 148 1.266891 GCACGAAAAGAATCGCTACCG 60.267 52.381 0.00 0.00 46.51 4.02
148 149 1.266891 CGCACGAAAAGAATCGCTACC 60.267 52.381 0.00 0.00 46.51 3.18
149 150 1.652124 TCGCACGAAAAGAATCGCTAC 59.348 47.619 0.00 0.00 46.51 3.58
150 151 1.985334 TCGCACGAAAAGAATCGCTA 58.015 45.000 0.00 0.00 46.51 4.26
151 152 1.061131 CATCGCACGAAAAGAATCGCT 59.939 47.619 0.00 0.00 46.51 4.93
152 153 1.201921 ACATCGCACGAAAAGAATCGC 60.202 47.619 0.00 0.00 46.51 4.58
154 155 3.455619 ACACATCGCACGAAAAGAATC 57.544 42.857 0.00 0.00 0.00 2.52
155 156 3.896648 AACACATCGCACGAAAAGAAT 57.103 38.095 0.00 0.00 0.00 2.40
156 157 3.684103 AAACACATCGCACGAAAAGAA 57.316 38.095 0.00 0.00 0.00 2.52
157 158 3.358775 CAAAACACATCGCACGAAAAGA 58.641 40.909 0.00 0.00 0.00 2.52
158 159 2.097925 GCAAAACACATCGCACGAAAAG 60.098 45.455 0.00 0.00 0.00 2.27
159 160 1.849219 GCAAAACACATCGCACGAAAA 59.151 42.857 0.00 0.00 0.00 2.29
160 161 1.471964 GCAAAACACATCGCACGAAA 58.528 45.000 0.00 0.00 0.00 3.46
161 162 0.317436 GGCAAAACACATCGCACGAA 60.317 50.000 0.00 0.00 0.00 3.85
162 163 1.281353 GGCAAAACACATCGCACGA 59.719 52.632 0.00 0.00 0.00 4.35
163 164 2.074353 CGGCAAAACACATCGCACG 61.074 57.895 0.00 0.00 0.00 5.34
164 165 0.996727 GACGGCAAAACACATCGCAC 60.997 55.000 0.00 0.00 0.00 5.34
165 166 1.281353 GACGGCAAAACACATCGCA 59.719 52.632 0.00 0.00 0.00 5.10
166 167 1.792057 CGACGGCAAAACACATCGC 60.792 57.895 0.00 0.00 0.00 4.58
167 168 0.179250 CTCGACGGCAAAACACATCG 60.179 55.000 0.00 0.00 0.00 3.84
168 169 1.126846 CTCTCGACGGCAAAACACATC 59.873 52.381 0.00 0.00 0.00 3.06
169 170 1.148310 CTCTCGACGGCAAAACACAT 58.852 50.000 0.00 0.00 0.00 3.21
170 171 1.495584 GCTCTCGACGGCAAAACACA 61.496 55.000 0.00 0.00 0.00 3.72
171 172 1.204312 GCTCTCGACGGCAAAACAC 59.796 57.895 0.00 0.00 0.00 3.32
172 173 2.307309 CGCTCTCGACGGCAAAACA 61.307 57.895 0.00 0.00 38.10 2.83
173 174 1.945776 CTCGCTCTCGACGGCAAAAC 61.946 60.000 0.00 0.00 40.21 2.43
174 175 1.733041 CTCGCTCTCGACGGCAAAA 60.733 57.895 0.00 0.00 40.21 2.44
175 176 2.126463 CTCGCTCTCGACGGCAAA 60.126 61.111 0.00 0.00 40.21 3.68
176 177 4.778415 GCTCGCTCTCGACGGCAA 62.778 66.667 0.00 0.00 40.21 4.52
180 181 2.921538 AATTCGGCTCGCTCTCGACG 62.922 60.000 0.00 0.00 40.21 5.12
181 182 1.226717 AATTCGGCTCGCTCTCGAC 60.227 57.895 0.00 0.00 40.21 4.20
182 183 1.226688 CAATTCGGCTCGCTCTCGA 60.227 57.895 0.00 0.00 43.28 4.04
183 184 2.233654 CCAATTCGGCTCGCTCTCG 61.234 63.158 0.00 0.00 0.00 4.04
184 185 3.711348 CCAATTCGGCTCGCTCTC 58.289 61.111 0.00 0.00 0.00 3.20
193 194 1.153086 CCAGGGAGAGCCAATTCGG 60.153 63.158 0.00 0.00 35.15 4.30
194 195 1.821332 GCCAGGGAGAGCCAATTCG 60.821 63.158 0.00 0.00 35.15 3.34
195 196 1.821332 CGCCAGGGAGAGCCAATTC 60.821 63.158 0.00 0.00 35.15 2.17
196 197 2.262774 CTCGCCAGGGAGAGCCAATT 62.263 60.000 6.14 0.00 35.47 2.32
197 198 2.688666 TCGCCAGGGAGAGCCAAT 60.689 61.111 0.00 0.00 35.15 3.16
198 199 3.393970 CTCGCCAGGGAGAGCCAA 61.394 66.667 6.14 0.00 35.47 4.52
202 203 2.186384 CTTGCTCGCCAGGGAGAG 59.814 66.667 15.23 13.93 43.37 3.20
203 204 4.087892 GCTTGCTCGCCAGGGAGA 62.088 66.667 15.23 1.33 36.08 3.71
204 205 3.694058 ATGCTTGCTCGCCAGGGAG 62.694 63.158 7.33 7.33 37.11 4.30
205 206 2.769652 AAATGCTTGCTCGCCAGGGA 62.770 55.000 0.00 0.00 0.00 4.20
206 207 2.275547 GAAATGCTTGCTCGCCAGGG 62.276 60.000 0.00 0.00 0.00 4.45
207 208 1.138247 GAAATGCTTGCTCGCCAGG 59.862 57.895 0.00 0.00 0.00 4.45
208 209 1.138247 GGAAATGCTTGCTCGCCAG 59.862 57.895 0.00 0.00 0.00 4.85
209 210 1.303561 AGGAAATGCTTGCTCGCCA 60.304 52.632 0.00 0.00 0.00 5.69
210 211 1.138247 CAGGAAATGCTTGCTCGCC 59.862 57.895 0.00 0.00 29.36 5.54
211 212 1.138247 CCAGGAAATGCTTGCTCGC 59.862 57.895 0.00 0.00 29.36 5.03
212 213 1.138247 GCCAGGAAATGCTTGCTCG 59.862 57.895 0.00 0.00 29.36 5.03
213 214 1.252904 TGGCCAGGAAATGCTTGCTC 61.253 55.000 0.00 0.00 29.36 4.26
214 215 0.832983 TTGGCCAGGAAATGCTTGCT 60.833 50.000 5.11 0.00 32.62 3.91
215 216 0.390735 CTTGGCCAGGAAATGCTTGC 60.391 55.000 9.80 0.00 0.00 4.01
216 217 0.390735 GCTTGGCCAGGAAATGCTTG 60.391 55.000 20.85 0.00 0.00 4.01
217 218 1.880819 CGCTTGGCCAGGAAATGCTT 61.881 55.000 20.85 0.00 0.00 3.91
218 219 2.345760 CGCTTGGCCAGGAAATGCT 61.346 57.895 20.85 0.00 0.00 3.79
219 220 2.182537 CGCTTGGCCAGGAAATGC 59.817 61.111 20.85 10.50 0.00 3.56
220 221 1.660560 CCTCGCTTGGCCAGGAAATG 61.661 60.000 20.85 4.77 0.00 2.32
221 222 1.379044 CCTCGCTTGGCCAGGAAAT 60.379 57.895 20.85 0.00 0.00 2.17
222 223 2.034066 CCTCGCTTGGCCAGGAAA 59.966 61.111 20.85 4.12 0.00 3.13
223 224 4.722700 GCCTCGCTTGGCCAGGAA 62.723 66.667 20.85 4.52 46.82 3.36
230 231 1.596477 GCCAGATAGCCTCGCTTGG 60.596 63.158 0.00 0.00 40.44 3.61
231 232 4.040068 GCCAGATAGCCTCGCTTG 57.960 61.111 0.00 0.00 40.44 4.01
239 240 0.821301 GCTTTGGAGGGCCAGATAGC 60.821 60.000 6.18 4.00 46.91 2.97
240 241 0.533755 CGCTTTGGAGGGCCAGATAG 60.534 60.000 6.18 0.00 46.91 2.08
241 242 0.980754 TCGCTTTGGAGGGCCAGATA 60.981 55.000 6.18 0.00 46.91 1.98
242 243 2.262774 CTCGCTTTGGAGGGCCAGAT 62.263 60.000 6.18 0.00 46.91 2.90
243 244 2.927856 TCGCTTTGGAGGGCCAGA 60.928 61.111 6.18 0.00 46.91 3.86
244 245 2.437359 CTCGCTTTGGAGGGCCAG 60.437 66.667 6.18 0.00 46.91 4.85
245 246 2.351924 AAACTCGCTTTGGAGGGCCA 62.352 55.000 6.18 0.00 44.17 5.36
246 247 0.322187 TAAACTCGCTTTGGAGGGCC 60.322 55.000 0.00 0.00 38.39 5.80
247 248 1.751437 ATAAACTCGCTTTGGAGGGC 58.249 50.000 0.00 0.00 38.39 5.19
248 249 4.783764 AAAATAAACTCGCTTTGGAGGG 57.216 40.909 0.00 0.00 38.39 4.30
249 250 5.163652 CCCTAAAATAAACTCGCTTTGGAGG 60.164 44.000 0.00 0.00 38.39 4.30
250 251 5.646360 TCCCTAAAATAAACTCGCTTTGGAG 59.354 40.000 0.00 0.00 39.97 3.86
251 252 5.562635 TCCCTAAAATAAACTCGCTTTGGA 58.437 37.500 0.00 0.00 0.00 3.53
252 253 5.890424 TCCCTAAAATAAACTCGCTTTGG 57.110 39.130 0.00 0.00 0.00 3.28
253 254 6.584942 GGTTTCCCTAAAATAAACTCGCTTTG 59.415 38.462 0.00 0.00 34.34 2.77
254 255 6.265876 TGGTTTCCCTAAAATAAACTCGCTTT 59.734 34.615 0.00 0.00 34.34 3.51
255 256 5.771165 TGGTTTCCCTAAAATAAACTCGCTT 59.229 36.000 0.00 0.00 34.34 4.68
256 257 5.318630 TGGTTTCCCTAAAATAAACTCGCT 58.681 37.500 0.00 0.00 34.34 4.93
257 258 5.632244 TGGTTTCCCTAAAATAAACTCGC 57.368 39.130 0.00 0.00 34.34 5.03
258 259 7.380333 GTGTTTGGTTTCCCTAAAATAAACTCG 59.620 37.037 0.00 0.00 37.50 4.18
259 260 7.380333 CGTGTTTGGTTTCCCTAAAATAAACTC 59.620 37.037 0.00 0.00 37.50 3.01
260 261 7.147863 ACGTGTTTGGTTTCCCTAAAATAAACT 60.148 33.333 0.00 0.00 37.50 2.66
261 262 6.979817 ACGTGTTTGGTTTCCCTAAAATAAAC 59.020 34.615 0.00 0.00 37.33 2.01
262 263 7.110043 ACGTGTTTGGTTTCCCTAAAATAAA 57.890 32.000 0.00 0.00 0.00 1.40
263 264 6.712179 ACGTGTTTGGTTTCCCTAAAATAA 57.288 33.333 0.00 0.00 0.00 1.40
264 265 7.121020 GGATACGTGTTTGGTTTCCCTAAAATA 59.879 37.037 0.00 0.00 31.67 1.40
265 266 6.071784 GGATACGTGTTTGGTTTCCCTAAAAT 60.072 38.462 0.00 0.00 31.67 1.82
266 267 5.241285 GGATACGTGTTTGGTTTCCCTAAAA 59.759 40.000 0.00 0.00 31.67 1.52
267 268 4.761227 GGATACGTGTTTGGTTTCCCTAAA 59.239 41.667 0.00 0.00 31.67 1.85
268 269 4.041938 AGGATACGTGTTTGGTTTCCCTAA 59.958 41.667 0.00 0.00 46.39 2.69
269 270 3.583966 AGGATACGTGTTTGGTTTCCCTA 59.416 43.478 0.00 0.00 46.39 3.53
270 271 2.374170 AGGATACGTGTTTGGTTTCCCT 59.626 45.455 0.00 0.00 46.39 4.20
271 272 2.786777 AGGATACGTGTTTGGTTTCCC 58.213 47.619 0.00 0.00 46.39 3.97
272 273 3.373130 GCTAGGATACGTGTTTGGTTTCC 59.627 47.826 0.00 0.00 46.39 3.13
273 274 3.373130 GGCTAGGATACGTGTTTGGTTTC 59.627 47.826 0.00 0.00 46.39 2.78
274 275 3.340928 GGCTAGGATACGTGTTTGGTTT 58.659 45.455 0.00 0.00 46.39 3.27
275 276 2.355412 GGGCTAGGATACGTGTTTGGTT 60.355 50.000 0.00 0.00 46.39 3.67
276 277 1.208776 GGGCTAGGATACGTGTTTGGT 59.791 52.381 0.00 0.00 46.39 3.67
277 278 1.208535 TGGGCTAGGATACGTGTTTGG 59.791 52.381 0.00 0.00 46.39 3.28
278 279 2.550978 CTGGGCTAGGATACGTGTTTG 58.449 52.381 0.00 0.00 46.39 2.93
279 280 1.134491 GCTGGGCTAGGATACGTGTTT 60.134 52.381 0.00 0.00 46.39 2.83
280 281 0.464452 GCTGGGCTAGGATACGTGTT 59.536 55.000 0.00 0.00 46.39 3.32
281 282 1.735376 CGCTGGGCTAGGATACGTGT 61.735 60.000 0.00 0.00 46.39 4.49
282 283 1.007271 CGCTGGGCTAGGATACGTG 60.007 63.158 0.00 0.00 46.39 4.49
283 284 1.152819 TCGCTGGGCTAGGATACGT 60.153 57.895 0.00 0.00 46.39 3.57
284 285 1.581954 CTCGCTGGGCTAGGATACG 59.418 63.158 0.00 0.00 46.39 3.06
285 286 1.968310 CCTCGCTGGGCTAGGATAC 59.032 63.158 4.37 0.00 43.08 2.24
286 287 1.908793 GCCTCGCTGGGCTAGGATA 60.909 63.158 13.15 0.00 43.08 2.59
287 288 3.237741 GCCTCGCTGGGCTAGGAT 61.238 66.667 13.15 0.00 43.08 3.24
294 295 1.006102 CGGTTATAGCCTCGCTGGG 60.006 63.158 3.94 0.00 40.10 4.45
295 296 0.104304 AACGGTTATAGCCTCGCTGG 59.896 55.000 3.94 0.00 40.10 4.85
296 297 1.935933 AAACGGTTATAGCCTCGCTG 58.064 50.000 3.94 0.00 40.10 5.18
297 298 2.676342 CAAAAACGGTTATAGCCTCGCT 59.324 45.455 3.94 0.00 43.41 4.93
298 299 2.674357 TCAAAAACGGTTATAGCCTCGC 59.326 45.455 3.94 0.00 0.00 5.03
299 300 4.254745 GTCAAAAACGGTTATAGCCTCG 57.745 45.455 3.94 0.00 0.00 4.63
312 313 3.669588 ACGTTTGGTTTCACGTCAAAAAC 59.330 39.130 8.50 8.50 46.52 2.43
313 314 3.898529 ACGTTTGGTTTCACGTCAAAAA 58.101 36.364 1.41 0.00 46.52 1.94
314 315 3.555917 ACGTTTGGTTTCACGTCAAAA 57.444 38.095 1.41 0.00 46.52 2.44
315 316 3.683822 AGTACGTTTGGTTTCACGTCAAA 59.316 39.130 0.00 0.00 46.52 2.69
316 317 3.260740 AGTACGTTTGGTTTCACGTCAA 58.739 40.909 0.00 0.00 46.52 3.18
317 318 2.891112 AGTACGTTTGGTTTCACGTCA 58.109 42.857 0.00 0.00 46.52 4.35
318 319 4.044426 ACTAGTACGTTTGGTTTCACGTC 58.956 43.478 0.00 0.00 46.52 4.34
320 321 4.293415 AGACTAGTACGTTTGGTTTCACG 58.707 43.478 0.00 0.00 42.29 4.35
321 322 4.683320 GGAGACTAGTACGTTTGGTTTCAC 59.317 45.833 0.00 0.00 0.00 3.18
322 323 4.262164 GGGAGACTAGTACGTTTGGTTTCA 60.262 45.833 0.00 0.00 0.00 2.69
323 324 4.021632 AGGGAGACTAGTACGTTTGGTTTC 60.022 45.833 0.00 0.00 0.00 2.78
324 325 3.899980 AGGGAGACTAGTACGTTTGGTTT 59.100 43.478 0.00 0.00 0.00 3.27
325 326 3.504375 AGGGAGACTAGTACGTTTGGTT 58.496 45.455 0.00 0.00 0.00 3.67
326 327 3.166560 AGGGAGACTAGTACGTTTGGT 57.833 47.619 0.00 0.00 0.00 3.67
327 328 3.846360 CAAGGGAGACTAGTACGTTTGG 58.154 50.000 0.00 0.00 0.00 3.28
328 329 3.251571 GCAAGGGAGACTAGTACGTTTG 58.748 50.000 0.00 0.00 0.00 2.93
329 330 2.233186 GGCAAGGGAGACTAGTACGTTT 59.767 50.000 0.00 0.00 0.00 3.60
330 331 1.823610 GGCAAGGGAGACTAGTACGTT 59.176 52.381 0.00 0.00 0.00 3.99
331 332 1.472188 GGCAAGGGAGACTAGTACGT 58.528 55.000 0.00 0.00 0.00 3.57
332 333 0.745468 GGGCAAGGGAGACTAGTACG 59.255 60.000 0.00 0.00 0.00 3.67
333 334 1.757699 CTGGGCAAGGGAGACTAGTAC 59.242 57.143 0.00 0.00 0.00 2.73
334 335 1.965318 GCTGGGCAAGGGAGACTAGTA 60.965 57.143 0.00 0.00 0.00 1.82
335 336 1.268283 GCTGGGCAAGGGAGACTAGT 61.268 60.000 0.00 0.00 0.00 2.57
336 337 0.980231 AGCTGGGCAAGGGAGACTAG 60.980 60.000 0.00 0.00 0.00 2.57
337 338 0.547712 AAGCTGGGCAAGGGAGACTA 60.548 55.000 0.00 0.00 0.00 2.59
338 339 1.846712 GAAGCTGGGCAAGGGAGACT 61.847 60.000 0.00 0.00 0.00 3.24
416 417 8.134895 CGCATAATCTTTTGGGCTTAATTTCTA 58.865 33.333 0.00 0.00 0.00 2.10
429 430 3.093574 CGCACTCACGCATAATCTTTTG 58.906 45.455 0.00 0.00 0.00 2.44
551 610 1.564207 GCGAATGGAACTACGGGTAC 58.436 55.000 0.00 0.00 0.00 3.34
552 611 0.461135 GGCGAATGGAACTACGGGTA 59.539 55.000 0.00 0.00 0.00 3.69
553 612 1.219935 GGCGAATGGAACTACGGGT 59.780 57.895 0.00 0.00 0.00 5.28
554 613 0.529992 GAGGCGAATGGAACTACGGG 60.530 60.000 0.00 0.00 0.00 5.28
555 614 0.460311 AGAGGCGAATGGAACTACGG 59.540 55.000 0.00 0.00 0.00 4.02
604 663 3.777556 CCTGCCCCCAAAGTCAAC 58.222 61.111 0.00 0.00 0.00 3.18
1101 1160 3.201290 CAAGACATCGCTTAGGCTCATT 58.799 45.455 0.00 0.00 36.09 2.57
1194 1253 1.763968 TCCAGTCCTCCATGTCGTAG 58.236 55.000 0.00 0.00 0.00 3.51
1263 1322 3.624777 GATCTGGGCCTTGAATTCTTCA 58.375 45.455 4.53 0.00 38.04 3.02
1357 1416 4.095483 GGTTTCAGCATCATCTTGTAGTGG 59.905 45.833 0.00 0.00 0.00 4.00
1484 1543 0.108804 CTTACGCCGCTCTTCTTGGA 60.109 55.000 0.00 0.00 0.00 3.53
1569 1628 1.073897 GCTGAACTGCCCTTGGAGT 59.926 57.895 0.00 0.00 0.00 3.85
1848 1914 4.032900 GTGAACATCAGTACGTATTGGCTG 59.967 45.833 16.90 15.86 0.00 4.85
1849 1915 4.081642 AGTGAACATCAGTACGTATTGGCT 60.082 41.667 16.90 3.69 0.00 4.75
1850 1916 4.181578 AGTGAACATCAGTACGTATTGGC 58.818 43.478 16.90 0.00 0.00 4.52
1979 2045 9.277783 ACAAGTTGTAATCAATATCCTATCAGC 57.722 33.333 6.75 0.00 35.92 4.26
2210 2276 6.483385 CAAGCATGCAGATTTCCTAGATAG 57.517 41.667 21.98 0.00 0.00 2.08
2372 2438 6.544931 TCAGCTTCCCATCTTCTTATCAAATG 59.455 38.462 0.00 0.00 0.00 2.32
2373 2439 6.666678 TCAGCTTCCCATCTTCTTATCAAAT 58.333 36.000 0.00 0.00 0.00 2.32
2501 2567 1.416401 ACCCGTCGGCTCATCATTATT 59.584 47.619 5.50 0.00 0.00 1.40
2551 2617 2.115427 TCGGCTGTCAAGGATTCCATA 58.885 47.619 5.29 0.00 0.00 2.74
2564 2630 5.465724 CAGTAGTAAAGTTTTCTTCGGCTGT 59.534 40.000 0.00 0.00 39.48 4.40
2706 2772 1.071699 CCTCCCGACTCTTTTGTTCCA 59.928 52.381 0.00 0.00 0.00 3.53
2736 2802 3.629398 ACAAACTGAGCTTTCTTCACTGG 59.371 43.478 0.00 0.00 0.00 4.00
2807 2873 2.969628 TCCAACATCCCCACAAAATGT 58.030 42.857 0.00 0.00 35.20 2.71
2875 2944 1.078709 GCAAGCGCTTGACATCACTA 58.921 50.000 45.25 0.00 42.93 2.74
2887 2956 0.024873 GTTGTTTGTTGTGCAAGCGC 59.975 50.000 0.00 0.00 40.56 5.92
2888 2957 1.321148 CAGTTGTTTGTTGTGCAAGCG 59.679 47.619 0.00 0.00 40.56 4.68
2896 2965 2.957491 TGCTTCCCAGTTGTTTGTTG 57.043 45.000 0.00 0.00 0.00 3.33
3062 3131 0.175531 AGCAAACACACCAACTTGCC 59.824 50.000 2.22 0.00 44.14 4.52
3063 3132 1.660104 CAAGCAAACACACCAACTTGC 59.340 47.619 0.00 0.00 43.56 4.01
3577 3646 1.228094 TTGTGGCCGCAGTGAATGA 60.228 52.632 20.15 0.00 0.00 2.57
3632 3701 6.801377 TGCATGCGATAAAGAAAACACTTTAG 59.199 34.615 14.09 0.00 42.80 1.85
3813 3891 1.613836 CTTCTTCAAACTGCAGCCCT 58.386 50.000 15.27 0.00 0.00 5.19
3927 4008 4.927782 GTGGCACGGACCTGCACA 62.928 66.667 0.00 9.35 39.08 4.57
4204 4291 0.964358 GCTATGATGCTGGATGCCCC 60.964 60.000 0.00 0.00 42.00 5.80
4217 4304 2.840038 TGAGCAAAGAAGGGAGCTATGA 59.160 45.455 0.00 0.00 37.48 2.15
4230 4317 1.129998 CTGTTGGCGAGATGAGCAAAG 59.870 52.381 0.00 0.00 36.08 2.77
4250 4337 4.498241 GAGAAAAATGGCATCTGGAAACC 58.502 43.478 0.00 0.00 0.00 3.27
4315 4402 1.369091 ATCGGCGCACCATCAACTTC 61.369 55.000 10.83 0.00 34.57 3.01
4458 4545 1.812571 CAAGTATATGAATGCCGGGGC 59.187 52.381 2.18 1.86 42.35 5.80
4588 4691 5.127682 ACATTGTAAGGAATCAAATGGCCTC 59.872 40.000 3.32 0.00 0.00 4.70
4594 4697 7.231317 ACTGACACACATTGTAAGGAATCAAAT 59.769 33.333 0.00 0.00 40.82 2.32
4702 4805 4.610122 CACGACGGTTTATACGTAGCATAG 59.390 45.833 0.08 0.00 45.68 2.23
4720 4823 2.930040 AGCAGTACAACATATGCACGAC 59.070 45.455 1.58 0.00 41.14 4.34
4801 4905 1.202533 CGAGGGGCGAATTCTGTACAT 60.203 52.381 3.52 0.00 44.57 2.29
4868 4972 6.964908 AGCGAGATATATATCAGATGAACCG 58.035 40.000 21.95 12.85 35.17 4.44
4890 4994 4.880759 AGTCTGTACAGATGCATATGAGC 58.119 43.478 27.54 17.91 39.97 4.26
4894 4998 5.876651 TCCAAGTCTGTACAGATGCATAT 57.123 39.130 27.54 8.66 39.97 1.78
4919 5023 3.304928 CGAAAACTGCATTTGAGGCTTCT 60.305 43.478 0.00 0.00 0.00 2.85
4945 5049 6.216569 AGATGTTGTATAGTGCTCATTACGG 58.783 40.000 0.00 0.00 0.00 4.02
4988 5092 6.158598 CACAACATGCCAAATAGTTTTAGCT 58.841 36.000 0.00 0.00 31.68 3.32
5022 5126 5.597806 TCACTACGGTTTATTGATGCCTAG 58.402 41.667 0.00 0.00 0.00 3.02
5039 5143 0.527817 CCCTCGCAACCGATCACTAC 60.528 60.000 0.00 0.00 43.47 2.73
5066 5172 4.283678 CGCTAATGGTTGTTTCGTCAAAA 58.716 39.130 0.00 0.00 0.00 2.44
5130 5236 2.642154 TAAACGGGCCACTTCTTTCA 57.358 45.000 4.39 0.00 0.00 2.69
5132 5238 4.014406 CCTTATAAACGGGCCACTTCTTT 58.986 43.478 4.39 0.00 0.00 2.52
5137 5243 1.587066 TCCCTTATAAACGGGCCACT 58.413 50.000 4.39 0.00 40.41 4.00
5197 5303 2.624557 CCTACCTCCTAGCTCTGGTGTT 60.625 54.545 0.00 0.00 34.33 3.32
5198 5304 1.063567 CCTACCTCCTAGCTCTGGTGT 60.064 57.143 0.00 0.00 34.33 4.16
5200 5306 0.558712 CCCTACCTCCTAGCTCTGGT 59.441 60.000 0.00 0.00 36.66 4.00
5201 5307 0.558712 ACCCTACCTCCTAGCTCTGG 59.441 60.000 0.00 0.00 0.00 3.86
5202 5308 2.463047 AACCCTACCTCCTAGCTCTG 57.537 55.000 0.00 0.00 0.00 3.35
5203 5309 3.727923 TCATAACCCTACCTCCTAGCTCT 59.272 47.826 0.00 0.00 0.00 4.09
5209 5315 2.866454 AGACCTCATAACCCTACCTCCT 59.134 50.000 0.00 0.00 0.00 3.69
5260 5366 7.730084 TCTCGTTTCTGGATCAGATGATATTT 58.270 34.615 0.00 0.00 40.39 1.40
5263 5369 5.830457 ACTCTCGTTTCTGGATCAGATGATA 59.170 40.000 0.00 0.00 40.39 2.15
5287 5393 3.458857 TGTAGTGACTTTGGGTTTGGGTA 59.541 43.478 0.00 0.00 0.00 3.69
5308 5414 3.002656 GGTCGTATTTGAGATGCACCATG 59.997 47.826 0.00 0.00 0.00 3.66
5338 5444 2.079925 GTCCTAGGCTGCAACTTTCTG 58.920 52.381 2.96 0.00 0.00 3.02
5339 5445 1.338200 CGTCCTAGGCTGCAACTTTCT 60.338 52.381 2.96 0.00 0.00 2.52
5340 5446 1.079503 CGTCCTAGGCTGCAACTTTC 58.920 55.000 2.96 0.00 0.00 2.62
5341 5447 0.685097 TCGTCCTAGGCTGCAACTTT 59.315 50.000 2.96 0.00 0.00 2.66
5342 5448 0.247736 CTCGTCCTAGGCTGCAACTT 59.752 55.000 2.96 0.00 0.00 2.66
5343 5449 1.893786 CTCGTCCTAGGCTGCAACT 59.106 57.895 2.96 0.00 0.00 3.16
5344 5450 1.811679 GCTCGTCCTAGGCTGCAAC 60.812 63.158 2.96 0.00 0.00 4.17
5345 5451 0.683179 TAGCTCGTCCTAGGCTGCAA 60.683 55.000 2.96 0.00 37.50 4.08
5346 5452 1.076995 TAGCTCGTCCTAGGCTGCA 60.077 57.895 2.96 0.00 37.50 4.41
5347 5453 1.360911 GTAGCTCGTCCTAGGCTGC 59.639 63.158 2.96 5.50 37.50 5.25
5348 5454 1.649815 CGTAGCTCGTCCTAGGCTG 59.350 63.158 2.96 0.00 37.50 4.85
5349 5455 4.144418 CGTAGCTCGTCCTAGGCT 57.856 61.111 2.96 0.00 39.74 4.58
5369 5475 1.106285 ACGGTCTGGATAACGGGTAC 58.894 55.000 0.00 0.00 0.00 3.34
5370 5476 1.750778 GAACGGTCTGGATAACGGGTA 59.249 52.381 0.00 0.00 0.00 3.69
5371 5477 0.533951 GAACGGTCTGGATAACGGGT 59.466 55.000 0.00 0.00 0.00 5.28
5372 5478 0.179092 GGAACGGTCTGGATAACGGG 60.179 60.000 0.00 0.00 0.00 5.28
5373 5479 0.179092 GGGAACGGTCTGGATAACGG 60.179 60.000 0.00 0.00 0.00 4.44
5374 5480 0.822164 AGGGAACGGTCTGGATAACG 59.178 55.000 0.00 0.00 0.00 3.18
5375 5481 1.202382 CGAGGGAACGGTCTGGATAAC 60.202 57.143 0.00 0.00 0.00 1.89
5376 5482 1.108776 CGAGGGAACGGTCTGGATAA 58.891 55.000 0.00 0.00 0.00 1.75
5377 5483 1.389609 GCGAGGGAACGGTCTGGATA 61.390 60.000 0.00 0.00 0.00 2.59
5378 5484 2.722201 GCGAGGGAACGGTCTGGAT 61.722 63.158 0.00 0.00 0.00 3.41
5379 5485 3.379445 GCGAGGGAACGGTCTGGA 61.379 66.667 0.00 0.00 0.00 3.86
5380 5486 4.796231 CGCGAGGGAACGGTCTGG 62.796 72.222 0.00 0.00 0.00 3.86
5381 5487 3.966026 GACGCGAGGGAACGGTCTG 62.966 68.421 15.93 0.00 33.87 3.51
5382 5488 3.745803 GACGCGAGGGAACGGTCT 61.746 66.667 15.93 0.00 33.87 3.85
5386 5492 3.678717 ATCACGACGCGAGGGAACG 62.679 63.158 15.93 10.76 0.00 3.95
5387 5493 1.872679 GATCACGACGCGAGGGAAC 60.873 63.158 15.93 8.18 0.00 3.62
5388 5494 2.488355 GATCACGACGCGAGGGAA 59.512 61.111 15.93 0.00 0.00 3.97
5389 5495 3.515286 GGATCACGACGCGAGGGA 61.515 66.667 15.93 14.03 0.00 4.20
5400 5506 0.584396 TCAAACAACGCACGGATCAC 59.416 50.000 0.00 0.00 0.00 3.06
5401 5507 0.584396 GTCAAACAACGCACGGATCA 59.416 50.000 0.00 0.00 0.00 2.92
5402 5508 0.110373 GGTCAAACAACGCACGGATC 60.110 55.000 0.00 0.00 0.00 3.36
5403 5509 1.837538 CGGTCAAACAACGCACGGAT 61.838 55.000 0.00 0.00 0.00 4.18
5404 5510 2.526993 CGGTCAAACAACGCACGGA 61.527 57.895 0.00 0.00 0.00 4.69
5405 5511 2.052590 CGGTCAAACAACGCACGG 60.053 61.111 0.00 0.00 0.00 4.94
5406 5512 1.367195 GTCGGTCAAACAACGCACG 60.367 57.895 0.00 0.00 0.00 5.34
5407 5513 0.097325 TTGTCGGTCAAACAACGCAC 59.903 50.000 0.00 0.00 31.90 5.34
5408 5514 0.097325 GTTGTCGGTCAAACAACGCA 59.903 50.000 3.66 0.00 44.82 5.24
5409 5515 2.849521 GTTGTCGGTCAAACAACGC 58.150 52.632 3.66 0.00 44.82 4.84
5412 5518 1.018148 ATGCGTTGTCGGTCAAACAA 58.982 45.000 0.00 0.00 37.81 2.83
5413 5519 0.306228 CATGCGTTGTCGGTCAAACA 59.694 50.000 0.00 0.00 37.81 2.83
5414 5520 0.306533 ACATGCGTTGTCGGTCAAAC 59.693 50.000 0.00 0.00 37.81 2.93
5415 5521 0.306228 CACATGCGTTGTCGGTCAAA 59.694 50.000 0.00 0.00 36.00 2.69
5416 5522 1.938125 CACATGCGTTGTCGGTCAA 59.062 52.632 0.00 0.00 36.00 3.18
5417 5523 2.603247 GCACATGCGTTGTCGGTCA 61.603 57.895 0.00 0.00 36.00 4.02
5418 5524 1.911293 ATGCACATGCGTTGTCGGTC 61.911 55.000 0.00 0.00 45.83 4.79
5419 5525 1.965930 ATGCACATGCGTTGTCGGT 60.966 52.632 0.00 0.00 45.83 4.69
5420 5526 1.512522 CATGCACATGCGTTGTCGG 60.513 57.895 0.00 0.00 45.83 4.79
5421 5527 0.790495 GACATGCACATGCGTTGTCG 60.790 55.000 18.27 2.78 42.56 4.35
5422 5528 0.454957 GGACATGCACATGCGTTGTC 60.455 55.000 22.14 22.14 46.76 3.18
5423 5529 1.171549 TGGACATGCACATGCGTTGT 61.172 50.000 10.50 10.88 45.83 3.32
5424 5530 0.730155 GTGGACATGCACATGCGTTG 60.730 55.000 10.50 0.60 45.83 4.10
5425 5531 1.580942 GTGGACATGCACATGCGTT 59.419 52.632 10.50 0.00 45.83 4.84
5426 5532 3.266964 GTGGACATGCACATGCGT 58.733 55.556 10.50 0.00 45.83 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.