Multiple sequence alignment - TraesCS3A01G002900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G002900 chr3A 100.000 3875 0 0 1 3875 1710620 1706746 0.000000e+00 7156.0
1 TraesCS3A01G002900 chr3A 96.330 218 6 2 1999 2215 1708572 1708356 1.320000e-94 357.0
2 TraesCS3A01G002900 chr3A 96.330 218 6 2 2049 2265 1708622 1708406 1.320000e-94 357.0
3 TraesCS3A01G002900 chr3A 97.605 167 2 2 1999 2164 1708521 1708356 6.340000e-73 285.0
4 TraesCS3A01G002900 chr3A 97.605 167 2 2 2100 2265 1708622 1708457 6.340000e-73 285.0
5 TraesCS3A01G002900 chr3A 94.828 116 4 2 1999 2113 1708470 1708356 3.080000e-41 180.0
6 TraesCS3A01G002900 chr3A 94.828 116 4 2 2151 2265 1708622 1708508 3.080000e-41 180.0
7 TraesCS3A01G002900 chr3A 93.846 65 2 2 1999 2062 1708419 1708356 3.190000e-16 97.1
8 TraesCS3A01G002900 chr3A 93.846 65 2 2 2202 2265 1708622 1708559 3.190000e-16 97.1
9 TraesCS3A01G002900 chr3D 96.425 1007 26 3 2771 3771 2403159 2404161 0.000000e+00 1652.0
10 TraesCS3A01G002900 chr3D 96.757 771 11 5 1198 1960 2401834 2402598 0.000000e+00 1273.0
11 TraesCS3A01G002900 chr3D 80.540 1223 141 45 1 1160 2310352 2311540 0.000000e+00 850.0
12 TraesCS3A01G002900 chr3D 95.813 406 12 3 2375 2775 2402643 2403048 0.000000e+00 651.0
13 TraesCS3A01G002900 chr3D 88.444 450 40 4 1647 2090 2342037 2341594 2.050000e-147 532.0
14 TraesCS3A01G002900 chr3D 86.373 477 33 20 2373 2822 2313784 2314255 3.480000e-135 492.0
15 TraesCS3A01G002900 chr3D 93.972 282 17 0 1314 1595 2342328 2342047 9.950000e-116 427.0
16 TraesCS3A01G002900 chr3D 87.430 358 31 12 2411 2755 2341289 2340933 2.170000e-107 399.0
17 TraesCS3A01G002900 chr3D 90.572 297 16 4 1670 1960 2313445 2313735 2.180000e-102 383.0
18 TraesCS3A01G002900 chr3D 91.209 273 24 0 1353 1625 2313160 2313432 4.730000e-99 372.0
19 TraesCS3A01G002900 chr3D 87.500 88 11 0 2105 2192 2341681 2341594 6.850000e-18 102.0
20 TraesCS3A01G002900 chr3B 88.960 779 55 13 1313 2087 4559689 4560440 0.000000e+00 933.0
21 TraesCS3A01G002900 chr3B 90.128 547 32 13 2247 2771 4560557 4561103 0.000000e+00 691.0
22 TraesCS3A01G002900 chr3B 85.463 454 44 9 1647 2090 4600900 4600459 1.640000e-123 453.0
23 TraesCS3A01G002900 chr3B 93.617 282 18 0 1314 1595 4601191 4600910 4.630000e-114 422.0
24 TraesCS3A01G002900 chr3B 86.479 355 38 9 2410 2755 4600154 4599801 7.860000e-102 381.0
25 TraesCS3A01G002900 chr3B 88.889 72 5 3 1251 1319 201508565 201508494 6.900000e-13 86.1
26 TraesCS3A01G002900 chrUn 100.000 110 0 0 3766 3875 444344013 444344122 1.830000e-48 204.0
27 TraesCS3A01G002900 chrUn 94.545 55 3 0 1251 1305 444994220 444994166 6.900000e-13 86.1
28 TraesCS3A01G002900 chr7B 100.000 110 0 0 3766 3875 743080818 743080927 1.830000e-48 204.0
29 TraesCS3A01G002900 chr7A 100.000 110 0 0 3766 3875 4954479 4954588 1.830000e-48 204.0
30 TraesCS3A01G002900 chr7A 100.000 110 0 0 3766 3875 120911193 120911084 1.830000e-48 204.0
31 TraesCS3A01G002900 chr7A 100.000 110 0 0 3766 3875 734951295 734951186 1.830000e-48 204.0
32 TraesCS3A01G002900 chr6B 100.000 110 0 0 3766 3875 394505990 394506099 1.830000e-48 204.0
33 TraesCS3A01G002900 chr6B 96.429 56 2 0 1251 1306 485868835 485868780 4.120000e-15 93.5
34 TraesCS3A01G002900 chr6A 100.000 110 0 0 3766 3875 289123263 289123372 1.830000e-48 204.0
35 TraesCS3A01G002900 chr6A 100.000 110 0 0 3766 3875 289157636 289157745 1.830000e-48 204.0
36 TraesCS3A01G002900 chr4D 100.000 110 0 0 3766 3875 483698410 483698519 1.830000e-48 204.0
37 TraesCS3A01G002900 chr1D 80.992 121 21 2 526 645 7983452 7983571 1.150000e-15 95.3
38 TraesCS3A01G002900 chr1D 94.545 55 3 0 1251 1305 254491651 254491597 6.900000e-13 86.1
39 TraesCS3A01G002900 chr1D 94.545 55 3 0 1251 1305 394180905 394180851 6.900000e-13 86.1
40 TraesCS3A01G002900 chr5D 96.364 55 2 0 1251 1305 449153716 449153770 1.480000e-14 91.6
41 TraesCS3A01G002900 chr6D 94.545 55 3 0 1251 1305 336838848 336838902 6.900000e-13 86.1
42 TraesCS3A01G002900 chr6D 94.545 55 3 0 1251 1305 431402014 431401960 6.900000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G002900 chr3A 1706746 1710620 3874 True 999.355556 7156 96.135333 1 3875 9 chr3A.!!$R1 3874
1 TraesCS3A01G002900 chr3D 2401834 2404161 2327 False 1192.000000 1652 96.331667 1198 3771 3 chr3D.!!$F2 2573
2 TraesCS3A01G002900 chr3D 2310352 2314255 3903 False 524.250000 850 87.173500 1 2822 4 chr3D.!!$F1 2821
3 TraesCS3A01G002900 chr3D 2340933 2342328 1395 True 365.000000 532 89.336500 1314 2755 4 chr3D.!!$R1 1441
4 TraesCS3A01G002900 chr3B 4559689 4561103 1414 False 812.000000 933 89.544000 1313 2771 2 chr3B.!!$F1 1458
5 TraesCS3A01G002900 chr3B 4599801 4601191 1390 True 418.666667 453 88.519667 1314 2755 3 chr3B.!!$R2 1441

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
732 780 0.035439 ATCTATTAATGGGCCGGCCG 60.035 55.0 38.22 21.04 36.85 6.13 F
1205 2760 0.105194 TCAGGTCCCCAACTCACAGA 60.105 55.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1880 3443 0.967662 TCACCGTTAATCCACGTCCA 59.032 50.000 0.0 0.0 38.57 4.02 R
2955 4824 2.076863 GTAGCTTCATCGTGGCAAACT 58.923 47.619 0.0 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.351711 TCTCCACCAATCACATCTATTTGAG 58.648 40.000 0.00 0.00 0.00 3.02
25 26 6.065976 TCCACCAATCACATCTATTTGAGT 57.934 37.500 0.00 0.00 0.00 3.41
34 35 7.381766 TCACATCTATTTGAGTGGACAATTG 57.618 36.000 3.24 3.24 33.01 2.32
35 36 7.167535 TCACATCTATTTGAGTGGACAATTGA 58.832 34.615 13.59 0.00 33.01 2.57
47 48 7.502226 TGAGTGGACAATTGAAGAACAAAGTAT 59.498 33.333 13.59 0.00 42.03 2.12
51 52 6.345096 ACAATTGAAGAACAAAGTATGGGG 57.655 37.500 13.59 0.00 42.03 4.96
53 54 2.432444 TGAAGAACAAAGTATGGGGCG 58.568 47.619 0.00 0.00 0.00 6.13
81 82 1.913778 TGCATGCACAAATGGAGTCT 58.086 45.000 18.46 0.00 0.00 3.24
83 84 2.229543 TGCATGCACAAATGGAGTCTTC 59.770 45.455 18.46 0.00 0.00 2.87
85 86 3.672511 GCATGCACAAATGGAGTCTTCAG 60.673 47.826 14.21 0.00 0.00 3.02
95 96 3.242867 TGGAGTCTTCAGAAGGACATGT 58.757 45.455 10.42 0.00 35.18 3.21
109 110 0.687354 ACATGTCCAGACACTGACCC 59.313 55.000 1.88 0.00 45.05 4.46
110 111 0.686789 CATGTCCAGACACTGACCCA 59.313 55.000 1.88 0.00 45.05 4.51
112 113 0.758734 TGTCCAGACACTGACCCAAG 59.241 55.000 0.00 0.00 36.21 3.61
115 116 0.319900 CCAGACACTGACCCAAGACG 60.320 60.000 0.00 0.00 32.44 4.18
116 117 0.389391 CAGACACTGACCCAAGACGT 59.611 55.000 0.00 0.00 32.44 4.34
119 120 1.597663 GACACTGACCCAAGACGTTTG 59.402 52.381 0.00 0.00 0.00 2.93
121 122 1.867233 CACTGACCCAAGACGTTTGAG 59.133 52.381 10.71 2.39 0.00 3.02
125 126 0.544697 ACCCAAGACGTTTGAGGTGT 59.455 50.000 15.57 5.27 0.00 4.16
142 143 7.447374 TGAGGTGTCAAATTTACCTATTGTG 57.553 36.000 10.49 0.00 44.51 3.33
147 148 6.364976 GTGTCAAATTTACCTATTGTGGTTGC 59.635 38.462 0.00 0.00 41.22 4.17
172 174 5.539955 AGATGCCCAAACAACTAGTCAAAAT 59.460 36.000 0.00 0.00 0.00 1.82
188 190 0.251608 AAATGAAAGTCCCCCACCCG 60.252 55.000 0.00 0.00 0.00 5.28
202 204 4.641645 CCCGCCTGCACCTGTCAA 62.642 66.667 0.00 0.00 0.00 3.18
215 217 3.071023 CACCTGTCAAACCCTCTAACTCA 59.929 47.826 0.00 0.00 0.00 3.41
217 219 3.557264 CCTGTCAAACCCTCTAACTCACC 60.557 52.174 0.00 0.00 0.00 4.02
218 220 3.042682 TGTCAAACCCTCTAACTCACCA 58.957 45.455 0.00 0.00 0.00 4.17
219 221 3.650942 TGTCAAACCCTCTAACTCACCAT 59.349 43.478 0.00 0.00 0.00 3.55
221 223 5.176592 GTCAAACCCTCTAACTCACCATAC 58.823 45.833 0.00 0.00 0.00 2.39
224 226 2.758979 ACCCTCTAACTCACCATACACG 59.241 50.000 0.00 0.00 0.00 4.49
268 270 2.224161 GCATGTAGCAGAGGAACCCTAG 60.224 54.545 0.00 0.00 44.79 3.02
269 271 1.486211 TGTAGCAGAGGAACCCTAGC 58.514 55.000 0.00 0.00 35.73 3.42
288 290 2.972713 AGCTGTCAAACCCTCTAACTCA 59.027 45.455 0.00 0.00 0.00 3.41
290 292 3.665190 CTGTCAAACCCTCTAACTCACC 58.335 50.000 0.00 0.00 0.00 4.02
292 294 3.323979 TGTCAAACCCTCTAACTCACCTC 59.676 47.826 0.00 0.00 0.00 3.85
294 296 2.907042 CAAACCCTCTAACTCACCTCCT 59.093 50.000 0.00 0.00 0.00 3.69
300 302 1.359474 TCTAACTCACCTCCTCCAGCT 59.641 52.381 0.00 0.00 0.00 4.24
301 303 1.754226 CTAACTCACCTCCTCCAGCTC 59.246 57.143 0.00 0.00 0.00 4.09
302 304 0.178921 AACTCACCTCCTCCAGCTCA 60.179 55.000 0.00 0.00 0.00 4.26
303 305 0.902516 ACTCACCTCCTCCAGCTCAC 60.903 60.000 0.00 0.00 0.00 3.51
305 307 0.178921 TCACCTCCTCCAGCTCACTT 60.179 55.000 0.00 0.00 0.00 3.16
322 345 3.056107 TCACTTCCTATTTGGTGTCTCCG 60.056 47.826 0.00 0.00 39.52 4.63
323 346 2.280628 CTTCCTATTTGGTGTCTCCGC 58.719 52.381 0.00 0.00 39.52 5.54
324 347 1.271856 TCCTATTTGGTGTCTCCGCA 58.728 50.000 0.00 0.00 39.52 5.69
340 363 3.429141 CACCTTGCTGGCGCTCAG 61.429 66.667 18.16 18.16 46.03 3.35
349 372 4.500116 GGCGCTCAGTCTCGGGAC 62.500 72.222 7.56 7.56 42.41 4.46
371 394 1.844687 GGGCTTTGCTCCTTTCTCAT 58.155 50.000 0.00 0.00 0.00 2.90
374 397 3.347216 GGCTTTGCTCCTTTCTCATACA 58.653 45.455 0.00 0.00 0.00 2.29
379 402 4.727507 TGCTCCTTTCTCATACAGAGTC 57.272 45.455 0.00 0.00 44.98 3.36
380 403 3.129462 TGCTCCTTTCTCATACAGAGTCG 59.871 47.826 0.00 0.00 44.98 4.18
384 407 4.396478 TCCTTTCTCATACAGAGTCGACTG 59.604 45.833 25.58 13.34 44.98 3.51
385 408 4.439426 CCTTTCTCATACAGAGTCGACTGG 60.439 50.000 25.58 17.16 44.98 4.00
386 409 2.017782 TCTCATACAGAGTCGACTGGC 58.982 52.381 25.58 9.74 44.98 4.85
387 410 0.733150 TCATACAGAGTCGACTGGCG 59.267 55.000 25.58 13.16 41.59 5.69
391 414 1.442857 CAGAGTCGACTGGCGTGAC 60.443 63.158 25.58 6.42 41.80 3.67
393 416 2.955402 AGTCGACTGGCGTGACTC 59.045 61.111 19.30 0.00 38.55 3.36
400 423 2.674177 CGACTGGCGTGACTCCTATTTT 60.674 50.000 0.00 0.00 34.64 1.82
405 428 5.186409 ACTGGCGTGACTCCTATTTTAGTTA 59.814 40.000 0.00 0.00 0.00 2.24
407 430 4.807834 GGCGTGACTCCTATTTTAGTTACC 59.192 45.833 0.00 0.00 30.65 2.85
410 433 6.040878 CGTGACTCCTATTTTAGTTACCTGG 58.959 44.000 0.00 0.00 30.65 4.45
411 434 6.346896 GTGACTCCTATTTTAGTTACCTGGG 58.653 44.000 0.00 0.00 0.00 4.45
416 439 7.853003 ACTCCTATTTTAGTTACCTGGGGATTA 59.147 37.037 0.00 0.00 0.00 1.75
422 445 4.668138 AGTTACCTGGGGATTAGCAAAA 57.332 40.909 0.00 0.00 0.00 2.44
424 447 4.044191 AGTTACCTGGGGATTAGCAAAACT 59.956 41.667 0.00 0.00 0.00 2.66
433 456 6.070309 TGGGGATTAGCAAAACTGCATAAATT 60.070 34.615 0.00 0.00 37.25 1.82
434 457 6.823182 GGGGATTAGCAAAACTGCATAAATTT 59.177 34.615 0.00 0.00 37.25 1.82
447 470 5.229423 TGCATAAATTTTGGCTGAGTCAAC 58.771 37.500 0.00 0.00 0.00 3.18
450 473 4.751767 AAATTTTGGCTGAGTCAACCAA 57.248 36.364 21.53 21.53 37.75 3.67
451 474 4.961438 AATTTTGGCTGAGTCAACCAAT 57.039 36.364 24.91 11.39 39.01 3.16
495 518 1.339644 TTTAGCCCCGGCCGTAGATT 61.340 55.000 26.12 8.02 43.17 2.40
503 526 2.199236 CCGGCCGTAGATTAAGTTGAC 58.801 52.381 26.12 0.00 0.00 3.18
517 540 8.870879 AGATTAAGTTGACGTTATTACTTGCTC 58.129 33.333 7.46 4.82 33.28 4.26
518 541 7.949903 TTAAGTTGACGTTATTACTTGCTCA 57.050 32.000 7.46 0.00 33.28 4.26
519 542 8.542497 TTAAGTTGACGTTATTACTTGCTCAT 57.458 30.769 7.46 0.00 33.28 2.90
522 545 5.696260 TGACGTTATTACTTGCTCATTCG 57.304 39.130 0.00 0.00 0.00 3.34
523 546 5.165676 TGACGTTATTACTTGCTCATTCGT 58.834 37.500 0.00 0.00 0.00 3.85
524 547 6.324042 TGACGTTATTACTTGCTCATTCGTA 58.676 36.000 0.00 0.00 0.00 3.43
528 553 8.114290 ACGTTATTACTTGCTCATTCGTATTTG 58.886 33.333 0.00 0.00 0.00 2.32
589 615 8.712285 TGAGGTATATGCTACAAAAAGTGTAC 57.288 34.615 0.00 0.00 41.98 2.90
591 617 7.626390 AGGTATATGCTACAAAAAGTGTACCA 58.374 34.615 0.00 0.00 41.98 3.25
594 620 9.590451 GTATATGCTACAAAAAGTGTACCACTA 57.410 33.333 0.00 0.00 44.62 2.74
638 664 8.842280 GGTTTCCCACGATATAATATTTGTGAA 58.158 33.333 0.00 0.00 0.00 3.18
729 777 6.834168 AAAATGTATCTATTAATGGGCCGG 57.166 37.500 0.00 0.00 0.00 6.13
730 778 3.343941 TGTATCTATTAATGGGCCGGC 57.656 47.619 21.18 21.18 0.00 6.13
731 779 2.026636 TGTATCTATTAATGGGCCGGCC 60.027 50.000 38.57 38.57 0.00 6.13
732 780 0.035439 ATCTATTAATGGGCCGGCCG 60.035 55.000 38.22 21.04 36.85 6.13
733 781 1.072505 CTATTAATGGGCCGGCCGT 59.927 57.895 38.22 26.81 36.85 5.68
734 782 0.536460 CTATTAATGGGCCGGCCGTT 60.536 55.000 38.22 33.50 36.85 4.44
735 783 0.535553 TATTAATGGGCCGGCCGTTC 60.536 55.000 38.22 25.38 36.85 3.95
736 784 3.866230 TATTAATGGGCCGGCCGTTCC 62.866 57.143 38.22 25.00 36.85 3.62
814 862 2.032071 CGCTCCCCAAACGGACTT 59.968 61.111 0.00 0.00 0.00 3.01
827 885 3.984241 GACTTGCGAGTCGGATCG 58.016 61.111 18.28 8.40 42.60 3.69
851 909 6.640907 CGACATGCATACAAATACTAGTAGCA 59.359 38.462 8.85 10.48 32.85 3.49
852 910 7.358435 CGACATGCATACAAATACTAGTAGCAC 60.358 40.741 8.85 0.00 31.91 4.40
853 911 7.272244 ACATGCATACAAATACTAGTAGCACA 58.728 34.615 8.85 0.00 31.91 4.57
854 912 7.439356 ACATGCATACAAATACTAGTAGCACAG 59.561 37.037 8.85 9.02 31.91 3.66
855 913 7.107639 TGCATACAAATACTAGTAGCACAGA 57.892 36.000 8.85 0.00 0.00 3.41
856 914 7.552459 TGCATACAAATACTAGTAGCACAGAA 58.448 34.615 8.85 0.00 0.00 3.02
857 915 7.491372 TGCATACAAATACTAGTAGCACAGAAC 59.509 37.037 8.85 0.00 0.00 3.01
858 916 7.042658 GCATACAAATACTAGTAGCACAGAACC 60.043 40.741 8.85 0.00 0.00 3.62
859 917 5.408356 ACAAATACTAGTAGCACAGAACCG 58.592 41.667 8.85 0.00 0.00 4.44
860 918 5.047519 ACAAATACTAGTAGCACAGAACCGT 60.048 40.000 8.85 0.00 0.00 4.83
861 919 5.656213 AATACTAGTAGCACAGAACCGTT 57.344 39.130 8.85 0.00 0.00 4.44
862 920 3.572604 ACTAGTAGCACAGAACCGTTC 57.427 47.619 2.81 2.81 0.00 3.95
903 961 0.472471 TAATCGTTCCCAGGCCATCC 59.528 55.000 5.01 0.00 0.00 3.51
904 962 2.608970 AATCGTTCCCAGGCCATCCG 62.609 60.000 5.01 0.00 37.47 4.18
905 963 3.781307 CGTTCCCAGGCCATCCGA 61.781 66.667 5.01 0.00 37.47 4.55
906 964 2.190578 GTTCCCAGGCCATCCGAG 59.809 66.667 5.01 0.00 37.47 4.63
907 965 3.797353 TTCCCAGGCCATCCGAGC 61.797 66.667 5.01 0.00 37.47 5.03
959 1017 2.718747 TTTGACGTTCCCATCGCCGT 62.719 55.000 0.00 0.00 36.04 5.68
960 1018 2.433664 GACGTTCCCATCGCCGTT 60.434 61.111 0.00 0.00 33.03 4.44
982 1040 2.171870 GGGGGTGAGATTATTTCCGTCA 59.828 50.000 0.00 0.00 0.00 4.35
985 1043 4.275936 GGGGTGAGATTATTTCCGTCAATG 59.724 45.833 0.00 0.00 0.00 2.82
1011 1069 1.648467 GGGAACACATGAAGAGCGGC 61.648 60.000 0.00 0.00 0.00 6.53
1062 1120 5.068636 AGGTACTCGACAGACAGTCTTTAA 58.931 41.667 0.00 0.00 45.32 1.52
1063 1121 5.048852 AGGTACTCGACAGACAGTCTTTAAC 60.049 44.000 0.00 0.00 45.32 2.01
1064 1122 3.886549 ACTCGACAGACAGTCTTTAACG 58.113 45.455 0.00 4.90 45.32 3.18
1066 1124 4.201990 ACTCGACAGACAGTCTTTAACGTT 60.202 41.667 5.88 5.88 45.32 3.99
1067 1125 4.285292 TCGACAGACAGTCTTTAACGTTC 58.715 43.478 2.82 0.00 45.32 3.95
1068 1126 4.036027 TCGACAGACAGTCTTTAACGTTCT 59.964 41.667 2.82 0.00 45.32 3.01
1069 1127 4.146616 CGACAGACAGTCTTTAACGTTCTG 59.853 45.833 2.82 8.30 45.32 3.02
1070 1128 5.007385 ACAGACAGTCTTTAACGTTCTGT 57.993 39.130 16.72 16.72 43.97 3.41
1071 1129 4.804139 ACAGACAGTCTTTAACGTTCTGTG 59.196 41.667 20.39 11.72 45.54 3.66
1072 1130 5.041287 CAGACAGTCTTTAACGTTCTGTGA 58.959 41.667 20.39 6.69 39.08 3.58
1079 1137 6.421202 AGTCTTTAACGTTCTGTGATTCTGTC 59.579 38.462 2.82 0.00 0.00 3.51
1089 1147 6.298441 TCTGTGATTCTGTCAATGTGGATA 57.702 37.500 0.00 0.00 38.90 2.59
1090 1148 6.343703 TCTGTGATTCTGTCAATGTGGATAG 58.656 40.000 0.00 0.00 38.90 2.08
1091 1149 4.877823 TGTGATTCTGTCAATGTGGATAGC 59.122 41.667 0.00 0.00 38.90 2.97
1092 1150 4.877823 GTGATTCTGTCAATGTGGATAGCA 59.122 41.667 0.00 0.00 38.90 3.49
1093 1151 4.877823 TGATTCTGTCAATGTGGATAGCAC 59.122 41.667 0.00 0.00 32.78 4.40
1094 1152 3.266510 TCTGTCAATGTGGATAGCACC 57.733 47.619 0.00 0.00 0.00 5.01
1095 1153 2.571202 TCTGTCAATGTGGATAGCACCA 59.429 45.455 0.00 0.00 37.63 4.17
1132 1208 7.623770 TGTATTAAATCAGCGTTCGGAAATAC 58.376 34.615 0.00 0.00 0.00 1.89
1205 2760 0.105194 TCAGGTCCCCAACTCACAGA 60.105 55.000 0.00 0.00 0.00 3.41
1208 2763 0.693049 GGTCCCCAACTCACAGACAT 59.307 55.000 0.00 0.00 0.00 3.06
1278 2838 7.557358 AGCAAAGATTTTGGTTTGAAATCCTTT 59.443 29.630 0.78 0.00 41.97 3.11
1563 3123 2.168936 TGGTGGACATGTATAACGACCC 59.831 50.000 12.08 2.26 31.80 4.46
1654 3214 8.294341 TGTATTGCGTCTTATACTCTTATTGC 57.706 34.615 0.00 0.00 0.00 3.56
1754 3317 4.189188 CTGCATGGCAAGCCGCTC 62.189 66.667 12.67 0.00 38.41 5.03
1859 3422 4.021981 GGCAACCTATTCTTTGCTGAAGTT 60.022 41.667 6.29 0.00 46.11 2.66
1879 3442 1.202348 TGCATATACGCGAGGAGATGG 59.798 52.381 15.93 0.00 43.79 3.51
1880 3443 1.202582 GCATATACGCGAGGAGATGGT 59.797 52.381 15.93 0.00 43.79 3.55
1881 3444 2.868662 CATATACGCGAGGAGATGGTG 58.131 52.381 15.93 0.00 39.95 4.17
1882 3445 1.244816 TATACGCGAGGAGATGGTGG 58.755 55.000 15.93 0.00 0.00 4.61
1883 3446 0.467474 ATACGCGAGGAGATGGTGGA 60.467 55.000 15.93 0.00 0.00 4.02
1884 3447 1.381928 TACGCGAGGAGATGGTGGAC 61.382 60.000 15.93 0.00 0.00 4.02
1885 3448 2.105128 GCGAGGAGATGGTGGACG 59.895 66.667 0.00 0.00 0.00 4.79
1991 3557 7.962373 TGAAATATAAGCACTTTGTGATTGACG 59.038 33.333 10.84 0.00 42.25 4.35
2001 3567 3.313012 TGTGATTGACGGTAACCTGAG 57.687 47.619 0.00 0.00 0.00 3.35
2028 3594 8.621532 TTATCTGTTAGACAGCTTTGTGAATT 57.378 30.769 3.26 0.00 45.54 2.17
2069 3640 9.081997 GTATATGATGCTTATCTGTTAGACAGC 57.918 37.037 3.26 0.00 45.54 4.40
2071 3642 5.982356 TGATGCTTATCTGTTAGACAGCTT 58.018 37.500 3.26 6.65 45.54 3.74
2079 3650 8.621532 TTATCTGTTAGACAGCTTTGTGAATT 57.378 30.769 3.26 0.00 45.54 2.17
2087 3658 6.038356 AGACAGCTTTGTGAATTTGTTTCTG 58.962 36.000 0.00 0.00 35.23 3.02
2090 3661 6.038356 CAGCTTTGTGAATTTGTTTCTGTCT 58.962 36.000 0.00 0.00 35.23 3.41
2091 3662 6.197842 CAGCTTTGTGAATTTGTTTCTGTCTC 59.802 38.462 0.00 0.00 35.23 3.36
2092 3663 6.096001 AGCTTTGTGAATTTGTTTCTGTCTCT 59.904 34.615 0.00 0.00 35.23 3.10
2093 3664 6.197842 GCTTTGTGAATTTGTTTCTGTCTCTG 59.802 38.462 0.00 0.00 35.23 3.35
2094 3665 5.756195 TGTGAATTTGTTTCTGTCTCTGG 57.244 39.130 0.00 0.00 35.23 3.86
2095 3666 5.192927 TGTGAATTTGTTTCTGTCTCTGGT 58.807 37.500 0.00 0.00 35.23 4.00
2096 3667 6.353323 TGTGAATTTGTTTCTGTCTCTGGTA 58.647 36.000 0.00 0.00 35.23 3.25
2097 3668 6.998074 TGTGAATTTGTTTCTGTCTCTGGTAT 59.002 34.615 0.00 0.00 35.23 2.73
2098 3669 8.154203 TGTGAATTTGTTTCTGTCTCTGGTATA 58.846 33.333 0.00 0.00 35.23 1.47
2099 3670 9.167311 GTGAATTTGTTTCTGTCTCTGGTATAT 57.833 33.333 0.00 0.00 35.23 0.86
2100 3671 9.166173 TGAATTTGTTTCTGTCTCTGGTATATG 57.834 33.333 0.00 0.00 35.23 1.78
2101 3672 9.383519 GAATTTGTTTCTGTCTCTGGTATATGA 57.616 33.333 0.00 0.00 0.00 2.15
2102 3673 9.911788 AATTTGTTTCTGTCTCTGGTATATGAT 57.088 29.630 0.00 0.00 0.00 2.45
2103 3674 8.722480 TTTGTTTCTGTCTCTGGTATATGATG 57.278 34.615 0.00 0.00 0.00 3.07
2104 3675 6.283694 TGTTTCTGTCTCTGGTATATGATGC 58.716 40.000 0.00 0.00 0.00 3.91
2105 3676 6.098838 TGTTTCTGTCTCTGGTATATGATGCT 59.901 38.462 0.00 0.00 0.00 3.79
2106 3677 6.737720 TTCTGTCTCTGGTATATGATGCTT 57.262 37.500 0.00 0.00 0.00 3.91
2107 3678 7.839680 TTCTGTCTCTGGTATATGATGCTTA 57.160 36.000 0.00 0.00 0.00 3.09
2108 3679 8.427902 TTCTGTCTCTGGTATATGATGCTTAT 57.572 34.615 0.00 0.00 0.00 1.73
2109 3680 8.060931 TCTGTCTCTGGTATATGATGCTTATC 57.939 38.462 0.00 0.00 0.00 1.75
2110 3681 7.892771 TCTGTCTCTGGTATATGATGCTTATCT 59.107 37.037 0.00 0.00 0.00 1.98
2111 3682 7.834803 TGTCTCTGGTATATGATGCTTATCTG 58.165 38.462 0.00 0.00 0.00 2.90
2112 3683 7.452813 TGTCTCTGGTATATGATGCTTATCTGT 59.547 37.037 0.00 0.00 0.00 3.41
2113 3684 8.310382 GTCTCTGGTATATGATGCTTATCTGTT 58.690 37.037 0.00 0.00 0.00 3.16
2114 3685 9.533831 TCTCTGGTATATGATGCTTATCTGTTA 57.466 33.333 0.00 0.00 0.00 2.41
2115 3686 9.800433 CTCTGGTATATGATGCTTATCTGTTAG 57.200 37.037 0.00 0.00 0.00 2.34
2116 3687 9.533831 TCTGGTATATGATGCTTATCTGTTAGA 57.466 33.333 0.00 0.00 0.00 2.10
2117 3688 9.579768 CTGGTATATGATGCTTATCTGTTAGAC 57.420 37.037 0.00 0.00 0.00 2.59
2118 3689 9.088987 TGGTATATGATGCTTATCTGTTAGACA 57.911 33.333 0.00 0.00 0.00 3.41
2120 3691 9.081997 GTATATGATGCTTATCTGTTAGACAGC 57.918 37.037 3.26 0.00 45.54 4.40
2121 3692 5.604758 TGATGCTTATCTGTTAGACAGCT 57.395 39.130 3.26 0.00 45.54 4.24
2122 3693 5.982356 TGATGCTTATCTGTTAGACAGCTT 58.018 37.500 3.26 6.65 45.54 3.74
2123 3694 6.409704 TGATGCTTATCTGTTAGACAGCTTT 58.590 36.000 3.26 0.00 45.54 3.51
2124 3695 6.314648 TGATGCTTATCTGTTAGACAGCTTTG 59.685 38.462 3.26 0.00 45.54 2.77
2125 3696 5.551233 TGCTTATCTGTTAGACAGCTTTGT 58.449 37.500 3.26 0.00 45.54 2.83
2126 3697 5.409520 TGCTTATCTGTTAGACAGCTTTGTG 59.590 40.000 3.26 0.00 45.54 3.33
2127 3698 5.639506 GCTTATCTGTTAGACAGCTTTGTGA 59.360 40.000 3.26 0.00 45.54 3.58
2128 3699 6.147821 GCTTATCTGTTAGACAGCTTTGTGAA 59.852 38.462 3.26 0.00 45.54 3.18
2129 3700 7.148340 GCTTATCTGTTAGACAGCTTTGTGAAT 60.148 37.037 3.26 0.00 45.54 2.57
2130 3701 8.621532 TTATCTGTTAGACAGCTTTGTGAATT 57.378 30.769 3.26 0.00 45.54 2.17
2131 3702 6.942532 TCTGTTAGACAGCTTTGTGAATTT 57.057 33.333 3.26 0.00 45.54 1.82
2132 3703 6.728200 TCTGTTAGACAGCTTTGTGAATTTG 58.272 36.000 3.26 0.00 45.54 2.32
2133 3704 6.318648 TCTGTTAGACAGCTTTGTGAATTTGT 59.681 34.615 3.26 0.00 45.54 2.83
2134 3705 6.862209 TGTTAGACAGCTTTGTGAATTTGTT 58.138 32.000 0.00 0.00 0.00 2.83
2148 3719 9.778741 TTGTGAATTTGTTTCTGTCTCTAGTAT 57.221 29.630 0.00 0.00 35.23 2.12
2155 3726 9.534565 TTTGTTTCTGTCTCTAGTATATGATGC 57.465 33.333 0.00 0.00 0.00 3.91
2156 3727 8.470657 TGTTTCTGTCTCTAGTATATGATGCT 57.529 34.615 0.00 0.00 0.00 3.79
2163 3734 9.746457 TGTCTCTAGTATATGATGCTTATCTGT 57.254 33.333 0.00 0.00 0.00 3.41
2171 3742 9.081997 GTATATGATGCTTATCTGTTAGACAGC 57.918 37.037 3.26 0.00 45.54 4.40
2172 3743 5.604758 TGATGCTTATCTGTTAGACAGCT 57.395 39.130 3.26 0.00 45.54 4.24
2173 3744 5.982356 TGATGCTTATCTGTTAGACAGCTT 58.018 37.500 3.26 6.65 45.54 3.74
2174 3745 6.409704 TGATGCTTATCTGTTAGACAGCTTT 58.590 36.000 3.26 0.00 45.54 3.51
2175 3746 6.314648 TGATGCTTATCTGTTAGACAGCTTTG 59.685 38.462 3.26 0.00 45.54 2.77
2176 3747 5.551233 TGCTTATCTGTTAGACAGCTTTGT 58.449 37.500 3.26 0.00 45.54 2.83
2181 3752 8.621532 TTATCTGTTAGACAGCTTTGTGAATT 57.378 30.769 3.26 0.00 45.54 2.17
2182 3753 6.942532 TCTGTTAGACAGCTTTGTGAATTT 57.057 33.333 3.26 0.00 45.54 1.82
2183 3754 6.728200 TCTGTTAGACAGCTTTGTGAATTTG 58.272 36.000 3.26 0.00 45.54 2.32
2185 3756 6.862209 TGTTAGACAGCTTTGTGAATTTGTT 58.138 32.000 0.00 0.00 0.00 2.83
2187 3758 7.487829 TGTTAGACAGCTTTGTGAATTTGTTTC 59.512 33.333 0.00 0.00 34.72 2.78
2189 3760 6.038356 AGACAGCTTTGTGAATTTGTTTCTG 58.962 36.000 0.00 0.00 35.23 3.02
2192 3763 6.038356 CAGCTTTGTGAATTTGTTTCTGTCT 58.962 36.000 0.00 0.00 35.23 3.41
2193 3764 6.197842 CAGCTTTGTGAATTTGTTTCTGTCTC 59.802 38.462 0.00 0.00 35.23 3.36
2194 3765 6.096001 AGCTTTGTGAATTTGTTTCTGTCTCT 59.904 34.615 0.00 0.00 35.23 3.10
2196 3767 5.756195 TGTGAATTTGTTTCTGTCTCTGG 57.244 39.130 0.00 0.00 35.23 3.86
2197 3768 5.192927 TGTGAATTTGTTTCTGTCTCTGGT 58.807 37.500 0.00 0.00 35.23 4.00
2198 3769 6.353323 TGTGAATTTGTTTCTGTCTCTGGTA 58.647 36.000 0.00 0.00 35.23 3.25
2200 3771 8.154203 TGTGAATTTGTTTCTGTCTCTGGTATA 58.846 33.333 0.00 0.00 35.23 1.47
2202 3773 9.166173 TGAATTTGTTTCTGTCTCTGGTATATG 57.834 33.333 0.00 0.00 35.23 1.78
2203 3774 9.383519 GAATTTGTTTCTGTCTCTGGTATATGA 57.616 33.333 0.00 0.00 0.00 2.15
2204 3775 9.911788 AATTTGTTTCTGTCTCTGGTATATGAT 57.088 29.630 0.00 0.00 0.00 2.45
2205 3776 8.722480 TTTGTTTCTGTCTCTGGTATATGATG 57.278 34.615 0.00 0.00 0.00 3.07
2208 3779 6.737720 TTCTGTCTCTGGTATATGATGCTT 57.262 37.500 0.00 0.00 0.00 3.91
2210 3781 8.427902 TTCTGTCTCTGGTATATGATGCTTAT 57.572 34.615 0.00 0.00 0.00 1.73
2211 3782 8.060931 TCTGTCTCTGGTATATGATGCTTATC 57.939 38.462 0.00 0.00 0.00 1.75
2213 3784 7.834803 TGTCTCTGGTATATGATGCTTATCTG 58.165 38.462 0.00 0.00 0.00 2.90
2214 3785 7.452813 TGTCTCTGGTATATGATGCTTATCTGT 59.547 37.037 0.00 0.00 0.00 3.41
2215 3786 8.310382 GTCTCTGGTATATGATGCTTATCTGTT 58.690 37.037 0.00 0.00 0.00 3.16
2216 3787 9.533831 TCTCTGGTATATGATGCTTATCTGTTA 57.466 33.333 0.00 0.00 0.00 2.41
2217 3788 9.800433 CTCTGGTATATGATGCTTATCTGTTAG 57.200 37.037 0.00 0.00 0.00 2.34
2218 3789 9.533831 TCTGGTATATGATGCTTATCTGTTAGA 57.466 33.333 0.00 0.00 0.00 2.10
2219 3790 9.579768 CTGGTATATGATGCTTATCTGTTAGAC 57.420 37.037 0.00 0.00 0.00 2.59
2220 3791 9.088987 TGGTATATGATGCTTATCTGTTAGACA 57.911 33.333 0.00 0.00 0.00 3.41
2222 3793 9.081997 GTATATGATGCTTATCTGTTAGACAGC 57.918 37.037 3.26 0.00 45.54 4.40
2223 3794 5.604758 TGATGCTTATCTGTTAGACAGCT 57.395 39.130 3.26 0.00 45.54 4.24
2224 3795 5.982356 TGATGCTTATCTGTTAGACAGCTT 58.018 37.500 3.26 6.65 45.54 3.74
2225 3796 6.409704 TGATGCTTATCTGTTAGACAGCTTT 58.590 36.000 3.26 0.00 45.54 3.51
2226 3797 6.314648 TGATGCTTATCTGTTAGACAGCTTTG 59.685 38.462 3.26 0.00 45.54 2.77
2227 3798 5.551233 TGCTTATCTGTTAGACAGCTTTGT 58.449 37.500 3.26 0.00 45.54 2.83
2228 3799 5.409520 TGCTTATCTGTTAGACAGCTTTGTG 59.590 40.000 3.26 0.00 45.54 3.33
2230 3801 6.147821 GCTTATCTGTTAGACAGCTTTGTGAA 59.852 38.462 3.26 0.00 45.54 3.18
2232 3803 8.621532 TTATCTGTTAGACAGCTTTGTGAATT 57.378 30.769 3.26 0.00 45.54 2.17
2233 3804 6.942532 TCTGTTAGACAGCTTTGTGAATTT 57.057 33.333 3.26 0.00 45.54 1.82
2234 3805 6.728200 TCTGTTAGACAGCTTTGTGAATTTG 58.272 36.000 3.26 0.00 45.54 2.32
2235 3806 6.318648 TCTGTTAGACAGCTTTGTGAATTTGT 59.681 34.615 3.26 0.00 45.54 2.83
2236 3807 6.862209 TGTTAGACAGCTTTGTGAATTTGTT 58.138 32.000 0.00 0.00 0.00 2.83
2237 3808 7.319646 TGTTAGACAGCTTTGTGAATTTGTTT 58.680 30.769 0.00 0.00 0.00 2.83
2238 3809 7.487829 TGTTAGACAGCTTTGTGAATTTGTTTC 59.512 33.333 0.00 0.00 34.72 2.78
2239 3810 6.212888 AGACAGCTTTGTGAATTTGTTTCT 57.787 33.333 0.00 0.00 35.23 2.52
2241 3812 7.945134 AGACAGCTTTGTGAATTTGTTTCTAT 58.055 30.769 0.00 0.00 35.23 1.98
2242 3813 8.078596 AGACAGCTTTGTGAATTTGTTTCTATC 58.921 33.333 0.00 0.00 35.23 2.08
2244 3815 8.078596 ACAGCTTTGTGAATTTGTTTCTATCTC 58.921 33.333 0.00 0.00 35.23 2.75
2267 3852 9.389755 TCTCTAGTATATGATGCTGACTGTATC 57.610 37.037 3.88 3.88 38.12 2.24
2291 3879 4.165180 AGCCCATTTGTTTTACCCTGTTTT 59.835 37.500 0.00 0.00 0.00 2.43
2352 3940 9.893305 GTATTTTTAACAACTCTGTGCACTTAT 57.107 29.630 19.41 0.00 35.37 1.73
2368 3956 9.791801 TGTGCACTTATATCCATATGTAATGTT 57.208 29.630 19.41 0.00 0.00 2.71
2389 3978 5.164954 GTTTGCACAGACACAACCTTTTAA 58.835 37.500 0.00 0.00 0.00 1.52
2462 4189 5.394115 GGCAGTTAAATGACAATTACCCCTG 60.394 44.000 7.18 0.00 0.00 4.45
2624 4352 1.027357 GGACCGCTATTACGAGGACA 58.973 55.000 0.00 0.00 34.06 4.02
2625 4353 1.268948 GGACCGCTATTACGAGGACAC 60.269 57.143 0.00 0.00 34.06 3.67
2794 4663 4.553330 ACCATCTATTCGTTGGTCACTT 57.447 40.909 0.00 0.00 40.86 3.16
2826 4695 7.944729 ATTATTCTTTGCTTGTGTGTAGGAT 57.055 32.000 0.00 0.00 0.00 3.24
2944 4813 6.881065 CCCTCTTGTAATTTCTTGATGACTCA 59.119 38.462 0.00 0.00 0.00 3.41
3013 4882 7.224297 AGTTCCAAGTTTGAGCTATTTCTACA 58.776 34.615 0.00 0.00 0.00 2.74
3020 4889 7.093992 AGTTTGAGCTATTTCTACACTGAGAC 58.906 38.462 0.00 0.00 0.00 3.36
3034 4903 9.706691 TCTACACTGAGACTAAAGTAAATTTGG 57.293 33.333 0.00 0.00 35.59 3.28
3115 4984 2.830923 TGTTTCTGGCATGGGTATTTGG 59.169 45.455 0.00 0.00 0.00 3.28
3170 5039 6.818644 TGAAAACAAAAATCCATTCGTCCAAA 59.181 30.769 0.00 0.00 0.00 3.28
3173 5042 6.642707 ACAAAAATCCATTCGTCCAAAGTA 57.357 33.333 0.00 0.00 0.00 2.24
3231 5100 5.633830 AACTTGCCATGTTAGATTCACAG 57.366 39.130 0.00 0.00 0.00 3.66
3270 5145 9.713740 GCTACTTTTGTCATGAATAAATCAGAG 57.286 33.333 0.00 0.00 42.53 3.35
3361 5236 9.349713 ACTGTATATCTCTATATGCTCTAAGGC 57.650 37.037 0.00 0.00 33.27 4.35
3400 5275 8.763356 TGTTGATTTGTTGCAGAAAATATTGTC 58.237 29.630 8.24 0.00 0.00 3.18
3407 5282 2.791004 GCAGAAAATATTGTCGCCATGC 59.209 45.455 9.84 6.54 0.00 4.06
3456 5331 1.518903 AAGAGAAGGCGGCTTTGCAC 61.519 55.000 26.25 12.75 36.28 4.57
3526 5401 4.336993 ACTTGTTGTTTTATCGCAGTGGAA 59.663 37.500 0.00 0.00 0.00 3.53
3527 5402 4.902443 TGTTGTTTTATCGCAGTGGAAA 57.098 36.364 0.00 0.00 0.00 3.13
3528 5403 5.250235 TGTTGTTTTATCGCAGTGGAAAA 57.750 34.783 0.00 0.00 0.00 2.29
3565 5440 1.167851 ATCATTTGTGCCACTGACCG 58.832 50.000 0.00 0.00 0.00 4.79
3566 5441 0.179032 TCATTTGTGCCACTGACCGT 60.179 50.000 0.00 0.00 0.00 4.83
3604 5479 3.587797 ATAATCACAGTCGTCGGTTGT 57.412 42.857 0.00 0.00 0.00 3.32
3687 5562 8.480066 GCTCTGAAAATTTAACAAACTAGCAAC 58.520 33.333 0.00 0.00 0.00 4.17
3688 5563 9.515020 CTCTGAAAATTTAACAAACTAGCAACA 57.485 29.630 0.00 0.00 0.00 3.33
3748 5623 3.555917 ACAAGGCGTATAGAGCGATAC 57.444 47.619 0.00 0.00 35.00 2.24
3771 5646 5.014123 ACATGTCCCATTTTCTTGTCCTCTA 59.986 40.000 0.00 0.00 0.00 2.43
3772 5647 5.576563 TGTCCCATTTTCTTGTCCTCTAA 57.423 39.130 0.00 0.00 0.00 2.10
3773 5648 6.139679 TGTCCCATTTTCTTGTCCTCTAAT 57.860 37.500 0.00 0.00 0.00 1.73
3774 5649 6.552008 TGTCCCATTTTCTTGTCCTCTAATT 58.448 36.000 0.00 0.00 0.00 1.40
3775 5650 6.659242 TGTCCCATTTTCTTGTCCTCTAATTC 59.341 38.462 0.00 0.00 0.00 2.17
3776 5651 6.095580 GTCCCATTTTCTTGTCCTCTAATTCC 59.904 42.308 0.00 0.00 0.00 3.01
3777 5652 6.011628 TCCCATTTTCTTGTCCTCTAATTCCT 60.012 38.462 0.00 0.00 0.00 3.36
3778 5653 6.319911 CCCATTTTCTTGTCCTCTAATTCCTC 59.680 42.308 0.00 0.00 0.00 3.71
3779 5654 6.886459 CCATTTTCTTGTCCTCTAATTCCTCA 59.114 38.462 0.00 0.00 0.00 3.86
3780 5655 7.066766 CCATTTTCTTGTCCTCTAATTCCTCAG 59.933 40.741 0.00 0.00 0.00 3.35
3781 5656 4.744795 TCTTGTCCTCTAATTCCTCAGC 57.255 45.455 0.00 0.00 0.00 4.26
3782 5657 3.452627 TCTTGTCCTCTAATTCCTCAGCC 59.547 47.826 0.00 0.00 0.00 4.85
3783 5658 2.832838 TGTCCTCTAATTCCTCAGCCA 58.167 47.619 0.00 0.00 0.00 4.75
3784 5659 2.768527 TGTCCTCTAATTCCTCAGCCAG 59.231 50.000 0.00 0.00 0.00 4.85
3785 5660 3.034635 GTCCTCTAATTCCTCAGCCAGA 58.965 50.000 0.00 0.00 0.00 3.86
3786 5661 3.645687 GTCCTCTAATTCCTCAGCCAGAT 59.354 47.826 0.00 0.00 0.00 2.90
3787 5662 4.835615 GTCCTCTAATTCCTCAGCCAGATA 59.164 45.833 0.00 0.00 0.00 1.98
3788 5663 5.483583 GTCCTCTAATTCCTCAGCCAGATAT 59.516 44.000 0.00 0.00 0.00 1.63
3789 5664 6.013812 GTCCTCTAATTCCTCAGCCAGATATT 60.014 42.308 0.00 0.00 0.00 1.28
3790 5665 6.560304 TCCTCTAATTCCTCAGCCAGATATTT 59.440 38.462 0.00 0.00 0.00 1.40
3791 5666 6.878389 CCTCTAATTCCTCAGCCAGATATTTC 59.122 42.308 0.00 0.00 0.00 2.17
3792 5667 6.773638 TCTAATTCCTCAGCCAGATATTTCC 58.226 40.000 0.00 0.00 0.00 3.13
3793 5668 3.864789 TTCCTCAGCCAGATATTTCCC 57.135 47.619 0.00 0.00 0.00 3.97
3794 5669 3.066208 TCCTCAGCCAGATATTTCCCT 57.934 47.619 0.00 0.00 0.00 4.20
3795 5670 3.397527 TCCTCAGCCAGATATTTCCCTT 58.602 45.455 0.00 0.00 0.00 3.95
3796 5671 3.137176 TCCTCAGCCAGATATTTCCCTTG 59.863 47.826 0.00 0.00 0.00 3.61
3797 5672 2.883386 CTCAGCCAGATATTTCCCTTGC 59.117 50.000 0.00 0.00 0.00 4.01
3798 5673 1.959282 CAGCCAGATATTTCCCTTGCC 59.041 52.381 0.00 0.00 0.00 4.52
3799 5674 1.570501 AGCCAGATATTTCCCTTGCCA 59.429 47.619 0.00 0.00 0.00 4.92
3800 5675 1.959282 GCCAGATATTTCCCTTGCCAG 59.041 52.381 0.00 0.00 0.00 4.85
3801 5676 2.423373 GCCAGATATTTCCCTTGCCAGA 60.423 50.000 0.00 0.00 0.00 3.86
3802 5677 3.217626 CCAGATATTTCCCTTGCCAGAC 58.782 50.000 0.00 0.00 0.00 3.51
3803 5678 3.117738 CCAGATATTTCCCTTGCCAGACT 60.118 47.826 0.00 0.00 0.00 3.24
3804 5679 4.530875 CAGATATTTCCCTTGCCAGACTT 58.469 43.478 0.00 0.00 0.00 3.01
3805 5680 4.952335 CAGATATTTCCCTTGCCAGACTTT 59.048 41.667 0.00 0.00 0.00 2.66
3806 5681 5.067023 CAGATATTTCCCTTGCCAGACTTTC 59.933 44.000 0.00 0.00 0.00 2.62
3807 5682 1.995376 TTTCCCTTGCCAGACTTTCC 58.005 50.000 0.00 0.00 0.00 3.13
3808 5683 0.112412 TTCCCTTGCCAGACTTTCCC 59.888 55.000 0.00 0.00 0.00 3.97
3809 5684 1.675641 CCCTTGCCAGACTTTCCCG 60.676 63.158 0.00 0.00 0.00 5.14
3810 5685 1.374947 CCTTGCCAGACTTTCCCGA 59.625 57.895 0.00 0.00 0.00 5.14
3811 5686 0.035056 CCTTGCCAGACTTTCCCGAT 60.035 55.000 0.00 0.00 0.00 4.18
3812 5687 1.209504 CCTTGCCAGACTTTCCCGATA 59.790 52.381 0.00 0.00 0.00 2.92
3813 5688 2.555199 CTTGCCAGACTTTCCCGATAG 58.445 52.381 0.00 0.00 0.00 2.08
3814 5689 0.178068 TGCCAGACTTTCCCGATAGC 59.822 55.000 0.00 0.00 0.00 2.97
3815 5690 0.876342 GCCAGACTTTCCCGATAGCG 60.876 60.000 0.00 0.00 37.24 4.26
3840 5715 2.292569 TCGATAGATGTTACCACGGAGC 59.707 50.000 0.00 0.00 42.67 4.70
3841 5716 2.662700 GATAGATGTTACCACGGAGCG 58.337 52.381 0.00 0.00 0.00 5.03
3842 5717 0.742505 TAGATGTTACCACGGAGCGG 59.257 55.000 0.00 0.00 34.73 5.52
3844 5719 0.457035 GATGTTACCACGGAGCGGTA 59.543 55.000 0.00 0.00 43.53 4.02
3845 5720 0.174162 ATGTTACCACGGAGCGGTAC 59.826 55.000 0.00 0.00 45.72 3.34
3846 5721 1.153765 GTTACCACGGAGCGGTACC 60.154 63.158 0.16 0.16 45.72 3.34
3847 5722 1.304381 TTACCACGGAGCGGTACCT 60.304 57.895 10.90 0.00 45.72 3.08
3848 5723 0.034574 TTACCACGGAGCGGTACCTA 60.035 55.000 10.90 0.00 45.72 3.08
3849 5724 0.464373 TACCACGGAGCGGTACCTAG 60.464 60.000 10.90 0.00 43.53 3.02
3850 5725 2.412112 CACGGAGCGGTACCTAGC 59.588 66.667 10.90 7.03 0.00 3.42
3851 5726 2.044650 ACGGAGCGGTACCTAGCA 60.045 61.111 10.90 0.00 35.48 3.49
3852 5727 1.679977 ACGGAGCGGTACCTAGCAA 60.680 57.895 10.90 0.00 35.48 3.91
3853 5728 1.226888 CGGAGCGGTACCTAGCAAC 60.227 63.158 10.90 5.54 35.48 4.17
3854 5729 1.143401 GGAGCGGTACCTAGCAACC 59.857 63.158 10.90 10.59 35.48 3.77
3855 5730 1.328430 GGAGCGGTACCTAGCAACCT 61.328 60.000 10.90 0.00 33.34 3.50
3856 5731 0.535797 GAGCGGTACCTAGCAACCTT 59.464 55.000 10.90 0.00 33.34 3.50
3857 5732 0.535797 AGCGGTACCTAGCAACCTTC 59.464 55.000 10.90 2.87 33.34 3.46
3858 5733 0.248289 GCGGTACCTAGCAACCTTCA 59.752 55.000 10.90 0.00 33.34 3.02
3859 5734 1.134491 GCGGTACCTAGCAACCTTCAT 60.134 52.381 10.90 0.00 33.34 2.57
3860 5735 2.679930 GCGGTACCTAGCAACCTTCATT 60.680 50.000 10.90 0.00 33.34 2.57
3861 5736 3.195661 CGGTACCTAGCAACCTTCATTC 58.804 50.000 10.90 0.00 33.34 2.67
3862 5737 3.542648 GGTACCTAGCAACCTTCATTCC 58.457 50.000 4.06 0.00 32.72 3.01
3863 5738 3.200165 GGTACCTAGCAACCTTCATTCCT 59.800 47.826 4.06 0.00 32.72 3.36
3864 5739 3.356529 ACCTAGCAACCTTCATTCCTG 57.643 47.619 0.00 0.00 0.00 3.86
3865 5740 2.019984 CCTAGCAACCTTCATTCCTGC 58.980 52.381 0.00 0.00 0.00 4.85
3866 5741 2.356535 CCTAGCAACCTTCATTCCTGCT 60.357 50.000 0.11 0.11 45.05 4.24
3867 5742 2.299326 AGCAACCTTCATTCCTGCTT 57.701 45.000 0.00 0.00 40.36 3.91
3868 5743 2.601905 AGCAACCTTCATTCCTGCTTT 58.398 42.857 0.00 0.00 40.36 3.51
3869 5744 2.967887 AGCAACCTTCATTCCTGCTTTT 59.032 40.909 0.00 0.00 40.36 2.27
3870 5745 3.006217 AGCAACCTTCATTCCTGCTTTTC 59.994 43.478 0.00 0.00 40.36 2.29
3871 5746 3.862264 GCAACCTTCATTCCTGCTTTTCC 60.862 47.826 0.00 0.00 0.00 3.13
3872 5747 2.162681 ACCTTCATTCCTGCTTTTCCG 58.837 47.619 0.00 0.00 0.00 4.30
3873 5748 2.162681 CCTTCATTCCTGCTTTTCCGT 58.837 47.619 0.00 0.00 0.00 4.69
3874 5749 2.162408 CCTTCATTCCTGCTTTTCCGTC 59.838 50.000 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 7.874940 TGTTCTTCAATTGTCCACTCAAATAG 58.125 34.615 5.13 0.00 0.00 1.73
17 18 7.815840 TGTTCTTCAATTGTCCACTCAAATA 57.184 32.000 5.13 0.00 0.00 1.40
24 25 6.863126 CCATACTTTGTTCTTCAATTGTCCAC 59.137 38.462 5.13 0.00 35.84 4.02
25 26 6.015519 CCCATACTTTGTTCTTCAATTGTCCA 60.016 38.462 5.13 0.00 35.84 4.02
27 28 6.389906 CCCCATACTTTGTTCTTCAATTGTC 58.610 40.000 5.13 0.00 35.84 3.18
34 35 2.161609 CACGCCCCATACTTTGTTCTTC 59.838 50.000 0.00 0.00 0.00 2.87
35 36 2.159382 CACGCCCCATACTTTGTTCTT 58.841 47.619 0.00 0.00 0.00 2.52
95 96 1.048601 GTCTTGGGTCAGTGTCTGGA 58.951 55.000 0.00 0.00 31.51 3.86
102 103 1.202651 CCTCAAACGTCTTGGGTCAGT 60.203 52.381 8.76 0.00 0.00 3.41
105 106 1.226746 CACCTCAAACGTCTTGGGTC 58.773 55.000 14.45 0.00 0.00 4.46
106 107 0.544697 ACACCTCAAACGTCTTGGGT 59.455 50.000 8.76 11.09 0.00 4.51
109 110 4.552166 ATTTGACACCTCAAACGTCTTG 57.448 40.909 0.00 0.00 46.79 3.02
110 111 5.576447 AAATTTGACACCTCAAACGTCTT 57.424 34.783 0.00 0.00 46.79 3.01
112 113 5.008316 AGGTAAATTTGACACCTCAAACGTC 59.992 40.000 5.45 0.00 46.79 4.34
115 116 8.357402 ACAATAGGTAAATTTGACACCTCAAAC 58.643 33.333 13.30 0.00 46.79 2.93
119 120 6.433093 ACCACAATAGGTAAATTTGACACCTC 59.567 38.462 13.30 0.00 41.78 3.85
121 122 6.584185 ACCACAATAGGTAAATTTGACACC 57.416 37.500 0.00 0.34 40.98 4.16
125 126 6.491745 TCTGCAACCACAATAGGTAAATTTGA 59.508 34.615 0.00 0.00 42.25 2.69
134 135 1.406539 GGCATCTGCAACCACAATAGG 59.593 52.381 4.33 0.00 44.36 2.57
142 143 0.392336 TTGTTTGGGCATCTGCAACC 59.608 50.000 4.33 0.00 44.36 3.77
147 148 3.411446 TGACTAGTTGTTTGGGCATCTG 58.589 45.455 0.00 0.00 0.00 2.90
172 174 3.961414 GCGGGTGGGGGACTTTCA 61.961 66.667 0.00 0.00 0.00 2.69
188 190 2.564721 GGGTTTGACAGGTGCAGGC 61.565 63.158 0.00 0.00 0.00 4.85
192 194 2.152016 GTTAGAGGGTTTGACAGGTGC 58.848 52.381 0.00 0.00 0.00 5.01
202 204 3.194968 CGTGTATGGTGAGTTAGAGGGTT 59.805 47.826 0.00 0.00 0.00 4.11
215 217 1.651240 CGGTCCGTCTCGTGTATGGT 61.651 60.000 2.08 0.00 0.00 3.55
217 219 1.063649 CCGGTCCGTCTCGTGTATG 59.936 63.158 11.06 0.00 0.00 2.39
218 220 2.768492 GCCGGTCCGTCTCGTGTAT 61.768 63.158 11.06 0.00 0.00 2.29
219 221 3.434319 GCCGGTCCGTCTCGTGTA 61.434 66.667 11.06 0.00 0.00 2.90
242 244 2.963854 CTCTGCTACATGCCGGCG 60.964 66.667 23.90 11.34 42.00 6.46
245 247 0.811616 GGTTCCTCTGCTACATGCCG 60.812 60.000 0.00 0.00 42.00 5.69
247 249 0.543749 AGGGTTCCTCTGCTACATGC 59.456 55.000 0.00 0.00 43.25 4.06
249 251 2.043227 GCTAGGGTTCCTCTGCTACAT 58.957 52.381 0.00 0.00 34.61 2.29
250 252 1.007238 AGCTAGGGTTCCTCTGCTACA 59.993 52.381 10.96 0.00 40.11 2.74
251 253 1.410882 CAGCTAGGGTTCCTCTGCTAC 59.589 57.143 11.87 0.00 39.99 3.58
252 254 1.007238 ACAGCTAGGGTTCCTCTGCTA 59.993 52.381 11.87 0.00 39.99 3.49
253 255 0.252467 ACAGCTAGGGTTCCTCTGCT 60.252 55.000 8.04 8.04 41.66 4.24
255 257 1.561643 TGACAGCTAGGGTTCCTCTG 58.438 55.000 0.00 0.00 34.61 3.35
258 260 1.351350 GGTTTGACAGCTAGGGTTCCT 59.649 52.381 0.00 0.00 37.71 3.36
259 261 1.613520 GGGTTTGACAGCTAGGGTTCC 60.614 57.143 0.00 0.00 0.00 3.62
268 270 3.067833 GTGAGTTAGAGGGTTTGACAGC 58.932 50.000 0.00 0.00 0.00 4.40
269 271 3.325135 AGGTGAGTTAGAGGGTTTGACAG 59.675 47.826 0.00 0.00 0.00 3.51
288 290 0.907230 GGAAGTGAGCTGGAGGAGGT 60.907 60.000 0.00 0.00 34.09 3.85
290 292 2.151502 TAGGAAGTGAGCTGGAGGAG 57.848 55.000 0.00 0.00 0.00 3.69
292 294 3.539604 CAAATAGGAAGTGAGCTGGAGG 58.460 50.000 0.00 0.00 0.00 4.30
294 296 2.912956 ACCAAATAGGAAGTGAGCTGGA 59.087 45.455 0.00 0.00 41.22 3.86
300 302 3.056107 CGGAGACACCAAATAGGAAGTGA 60.056 47.826 0.00 0.00 41.22 3.41
301 303 3.262420 CGGAGACACCAAATAGGAAGTG 58.738 50.000 0.00 0.00 41.22 3.16
302 304 2.354805 GCGGAGACACCAAATAGGAAGT 60.355 50.000 0.00 0.00 41.22 3.01
303 305 2.280628 GCGGAGACACCAAATAGGAAG 58.719 52.381 0.00 0.00 41.22 3.46
305 307 1.066430 GTGCGGAGACACCAAATAGGA 60.066 52.381 0.00 0.00 41.22 2.94
324 347 3.890936 GACTGAGCGCCAGCAAGGT 62.891 63.158 21.16 6.49 46.81 3.50
348 371 3.146828 AAAGGAGCAAAGCCCCGGT 62.147 57.895 0.00 0.00 0.00 5.28
349 372 2.283173 AAAGGAGCAAAGCCCCGG 60.283 61.111 0.00 0.00 0.00 5.73
363 386 4.667262 CCAGTCGACTCTGTATGAGAAAG 58.333 47.826 16.96 0.00 45.39 2.62
369 392 0.452184 ACGCCAGTCGACTCTGTATG 59.548 55.000 16.96 3.98 41.67 2.39
371 394 0.604511 TCACGCCAGTCGACTCTGTA 60.605 55.000 16.96 0.00 41.67 2.74
374 397 1.579084 GAGTCACGCCAGTCGACTCT 61.579 60.000 16.96 7.82 43.72 3.24
379 402 0.456221 AATAGGAGTCACGCCAGTCG 59.544 55.000 0.00 0.00 45.38 4.18
380 403 2.674796 AAATAGGAGTCACGCCAGTC 57.325 50.000 0.00 0.00 0.00 3.51
384 407 4.807834 GGTAACTAAAATAGGAGTCACGCC 59.192 45.833 0.00 0.00 0.00 5.68
385 408 5.963140 GGTAACTAAAATAGGAGTCACGC 57.037 43.478 0.00 0.00 0.00 5.34
405 428 2.807676 CAGTTTTGCTAATCCCCAGGT 58.192 47.619 0.00 0.00 0.00 4.00
407 430 2.947448 GCAGTTTTGCTAATCCCCAG 57.053 50.000 0.00 0.00 46.95 4.45
422 445 4.523943 TGACTCAGCCAAAATTTATGCAGT 59.476 37.500 12.70 8.76 0.00 4.40
424 447 5.229423 GTTGACTCAGCCAAAATTTATGCA 58.771 37.500 12.70 0.00 0.00 3.96
447 470 9.875675 TTTCTTCGCAAAATCATTAAAAATTGG 57.124 25.926 0.00 0.00 0.00 3.16
465 488 1.135774 CGGGGCTAAAAGTTTCTTCGC 60.136 52.381 0.00 0.00 0.00 4.70
495 518 8.542497 AATGAGCAAGTAATAACGTCAACTTA 57.458 30.769 0.00 0.00 31.20 2.24
503 526 7.582679 CCAAATACGAATGAGCAAGTAATAACG 59.417 37.037 0.00 0.00 0.00 3.18
514 537 4.156008 AGTTTGACCCAAATACGAATGAGC 59.844 41.667 0.00 0.00 35.74 4.26
517 540 6.442952 TCAAAGTTTGACCCAAATACGAATG 58.557 36.000 14.35 0.00 35.74 2.67
518 541 6.642707 TCAAAGTTTGACCCAAATACGAAT 57.357 33.333 14.35 0.00 35.74 3.34
586 612 9.659830 CACTTTTGAGTACAAATTTAGTGGTAC 57.340 33.333 13.51 7.96 42.44 3.34
591 617 9.797556 GAAACCACTTTTGAGTACAAATTTAGT 57.202 29.630 0.00 0.00 43.99 2.24
707 755 4.705023 GCCGGCCCATTAATAGATACATTT 59.295 41.667 18.11 0.00 0.00 2.32
711 759 2.640184 GGCCGGCCCATTAATAGATAC 58.360 52.381 36.64 3.61 0.00 2.24
712 760 1.208535 CGGCCGGCCCATTAATAGATA 59.791 52.381 39.24 0.00 0.00 1.98
732 780 3.951769 ATGGGCTGGCTGCTGGAAC 62.952 63.158 16.14 0.00 42.39 3.62
733 781 3.650298 GATGGGCTGGCTGCTGGAA 62.650 63.158 16.14 0.35 42.39 3.53
734 782 4.119363 GATGGGCTGGCTGCTGGA 62.119 66.667 16.14 1.01 42.39 3.86
735 783 3.733507 ATGATGGGCTGGCTGCTGG 62.734 63.158 16.14 0.00 42.39 4.85
736 784 2.123854 ATGATGGGCTGGCTGCTG 60.124 61.111 16.14 0.00 42.39 4.41
737 785 2.123854 CATGATGGGCTGGCTGCT 60.124 61.111 16.14 0.00 42.39 4.24
738 786 1.610554 AAACATGATGGGCTGGCTGC 61.611 55.000 7.96 7.96 41.94 5.25
739 787 0.899720 AAAACATGATGGGCTGGCTG 59.100 50.000 0.00 0.00 0.00 4.85
740 788 1.648116 AAAAACATGATGGGCTGGCT 58.352 45.000 0.00 0.00 0.00 4.75
827 885 7.438160 TGTGCTACTAGTATTTGTATGCATGTC 59.562 37.037 10.16 3.02 31.29 3.06
838 896 5.656213 ACGGTTCTGTGCTACTAGTATTT 57.344 39.130 2.33 0.00 0.00 1.40
851 909 2.052782 AGCAAAAGGAACGGTTCTGT 57.947 45.000 19.40 5.74 0.00 3.41
852 910 3.436700 AAAGCAAAAGGAACGGTTCTG 57.563 42.857 19.40 11.32 0.00 3.02
853 911 4.204799 AGTAAAGCAAAAGGAACGGTTCT 58.795 39.130 19.40 4.21 0.00 3.01
854 912 4.534168 GAGTAAAGCAAAAGGAACGGTTC 58.466 43.478 12.41 12.41 0.00 3.62
855 913 3.317149 GGAGTAAAGCAAAAGGAACGGTT 59.683 43.478 0.00 0.00 0.00 4.44
856 914 2.882761 GGAGTAAAGCAAAAGGAACGGT 59.117 45.455 0.00 0.00 0.00 4.83
857 915 2.882137 TGGAGTAAAGCAAAAGGAACGG 59.118 45.455 0.00 0.00 0.00 4.44
858 916 4.561735 TTGGAGTAAAGCAAAAGGAACG 57.438 40.909 0.00 0.00 0.00 3.95
859 917 5.047847 GGTTTGGAGTAAAGCAAAAGGAAC 58.952 41.667 0.00 0.00 44.22 3.62
860 918 4.100344 GGGTTTGGAGTAAAGCAAAAGGAA 59.900 41.667 0.00 0.00 46.07 3.36
861 919 3.639561 GGGTTTGGAGTAAAGCAAAAGGA 59.360 43.478 0.00 0.00 46.07 3.36
862 920 3.641436 AGGGTTTGGAGTAAAGCAAAAGG 59.359 43.478 0.00 0.00 46.07 3.11
909 967 3.217743 GAGTAGCCCGGACGGAGG 61.218 72.222 13.13 0.00 37.50 4.30
910 968 3.217743 GGAGTAGCCCGGACGGAG 61.218 72.222 13.13 3.62 37.50 4.63
911 969 3.588817 TTGGAGTAGCCCGGACGGA 62.589 63.158 13.13 0.00 37.50 4.69
912 970 3.072468 TTGGAGTAGCCCGGACGG 61.072 66.667 0.73 3.25 34.97 4.79
959 1017 2.578940 ACGGAAATAATCTCACCCCCAA 59.421 45.455 0.00 0.00 0.00 4.12
960 1018 2.171870 GACGGAAATAATCTCACCCCCA 59.828 50.000 0.00 0.00 0.00 4.96
964 1022 4.275936 CCCATTGACGGAAATAATCTCACC 59.724 45.833 0.00 0.00 0.00 4.02
982 1040 2.282887 GTGTTCCCCACGCCCATT 60.283 61.111 0.00 0.00 33.61 3.16
1011 1069 2.957902 TACCTCCGGTGGGGCTATGG 62.958 65.000 25.70 6.59 36.19 2.74
1018 1076 1.754745 CATGGATACCTCCGGTGGG 59.245 63.158 25.70 19.08 45.37 4.61
1021 1079 0.471971 CTCCCATGGATACCTCCGGT 60.472 60.000 15.22 0.00 45.37 5.28
1062 1120 4.212004 CACATTGACAGAATCACAGAACGT 59.788 41.667 0.00 0.00 36.92 3.99
1063 1121 4.377738 CCACATTGACAGAATCACAGAACG 60.378 45.833 0.00 0.00 36.92 3.95
1064 1122 4.756642 TCCACATTGACAGAATCACAGAAC 59.243 41.667 0.00 0.00 36.92 3.01
1066 1124 4.622260 TCCACATTGACAGAATCACAGA 57.378 40.909 0.00 0.00 36.92 3.41
1067 1125 5.007430 GCTATCCACATTGACAGAATCACAG 59.993 44.000 0.00 0.00 36.92 3.66
1068 1126 4.877823 GCTATCCACATTGACAGAATCACA 59.122 41.667 0.00 0.00 36.92 3.58
1069 1127 4.877823 TGCTATCCACATTGACAGAATCAC 59.122 41.667 0.00 0.00 36.92 3.06
1070 1128 4.877823 GTGCTATCCACATTGACAGAATCA 59.122 41.667 0.00 0.00 44.06 2.57
1071 1129 4.274459 GGTGCTATCCACATTGACAGAATC 59.726 45.833 0.00 0.00 46.50 2.52
1072 1130 4.202441 GGTGCTATCCACATTGACAGAAT 58.798 43.478 0.00 0.00 46.50 2.40
1079 1137 6.039605 TGTTATCAATGGTGCTATCCACATTG 59.960 38.462 9.31 9.31 46.50 2.82
1113 1189 4.693566 TCAAGTATTTCCGAACGCTGATTT 59.306 37.500 0.00 0.00 0.00 2.17
1132 1208 7.531198 CGAATAGTACTACTAATCAGCGTCAAG 59.469 40.741 4.31 0.00 33.89 3.02
1190 2745 1.611673 CCATGTCTGTGAGTTGGGGAC 60.612 57.143 0.00 0.00 0.00 4.46
1194 2749 2.154462 GTTCCCATGTCTGTGAGTTGG 58.846 52.381 0.00 0.00 0.00 3.77
1195 2750 2.810274 CTGTTCCCATGTCTGTGAGTTG 59.190 50.000 0.00 0.00 0.00 3.16
1196 2751 2.439507 ACTGTTCCCATGTCTGTGAGTT 59.560 45.455 0.00 0.00 0.00 3.01
1278 2838 4.207165 GACAGGGCTGGCTAATTAAATGA 58.793 43.478 0.00 0.00 35.21 2.57
1563 3123 4.222588 TGCCAACCCCAAAAAGATTATGAG 59.777 41.667 0.00 0.00 0.00 2.90
1654 3214 6.974622 GCAATTTGTTACATGAATAGGTGAGG 59.025 38.462 0.00 0.00 0.00 3.86
1754 3317 7.995488 GTCCAATGGATATAATAATCCTCCCAG 59.005 40.741 4.81 0.00 44.98 4.45
1859 3422 1.202348 CCATCTCCTCGCGTATATGCA 59.798 52.381 16.91 0.00 34.15 3.96
1879 3442 1.073177 CACCGTTAATCCACGTCCAC 58.927 55.000 0.00 0.00 38.57 4.02
1880 3443 0.967662 TCACCGTTAATCCACGTCCA 59.032 50.000 0.00 0.00 38.57 4.02
1881 3444 1.728425 GTTCACCGTTAATCCACGTCC 59.272 52.381 0.00 0.00 38.57 4.79
1882 3445 2.406130 TGTTCACCGTTAATCCACGTC 58.594 47.619 0.00 0.00 38.57 4.34
1883 3446 2.224113 ACTGTTCACCGTTAATCCACGT 60.224 45.455 0.00 0.00 38.57 4.49
1884 3447 2.409975 ACTGTTCACCGTTAATCCACG 58.590 47.619 0.00 0.00 40.02 4.94
1885 3448 3.562557 ACAACTGTTCACCGTTAATCCAC 59.437 43.478 0.00 0.00 0.00 4.02
1991 3557 6.127423 TGTCTAACAGATAAGCTCAGGTTACC 60.127 42.308 0.00 0.00 0.00 2.85
2001 3567 5.639506 TCACAAAGCTGTCTAACAGATAAGC 59.360 40.000 11.15 4.40 45.10 3.09
2028 3594 8.918116 AGCATCATATACTAGAGACAGAAACAA 58.082 33.333 0.00 0.00 0.00 2.83
2069 3640 6.694411 CCAGAGACAGAAACAAATTCACAAAG 59.306 38.462 0.00 0.00 40.72 2.77
2071 3642 5.652014 ACCAGAGACAGAAACAAATTCACAA 59.348 36.000 0.00 0.00 40.72 3.33
2079 3650 6.763135 GCATCATATACCAGAGACAGAAACAA 59.237 38.462 0.00 0.00 0.00 2.83
2087 3658 7.835822 ACAGATAAGCATCATATACCAGAGAC 58.164 38.462 0.00 0.00 33.21 3.36
2090 3661 9.533831 TCTAACAGATAAGCATCATATACCAGA 57.466 33.333 0.00 0.00 33.21 3.86
2091 3662 9.579768 GTCTAACAGATAAGCATCATATACCAG 57.420 37.037 0.00 0.00 33.21 4.00
2092 3663 9.088987 TGTCTAACAGATAAGCATCATATACCA 57.911 33.333 0.00 0.00 33.21 3.25
2096 3667 8.373981 AAGCTGTCTAACAGATAAGCATCATAT 58.626 33.333 11.15 0.00 45.10 1.78
2097 3668 7.730084 AAGCTGTCTAACAGATAAGCATCATA 58.270 34.615 11.15 0.00 45.10 2.15
2098 3669 6.590068 AAGCTGTCTAACAGATAAGCATCAT 58.410 36.000 11.15 0.00 45.10 2.45
2099 3670 5.982356 AAGCTGTCTAACAGATAAGCATCA 58.018 37.500 11.15 0.00 45.10 3.07
2100 3671 6.314896 ACAAAGCTGTCTAACAGATAAGCATC 59.685 38.462 11.15 0.00 45.10 3.91
2101 3672 6.093219 CACAAAGCTGTCTAACAGATAAGCAT 59.907 38.462 11.15 2.69 45.10 3.79
2102 3673 5.409520 CACAAAGCTGTCTAACAGATAAGCA 59.590 40.000 11.15 0.00 45.10 3.91
2103 3674 5.639506 TCACAAAGCTGTCTAACAGATAAGC 59.360 40.000 11.15 4.40 45.10 3.09
2104 3675 7.658179 TTCACAAAGCTGTCTAACAGATAAG 57.342 36.000 11.15 3.81 45.10 1.73
2105 3676 8.621532 AATTCACAAAGCTGTCTAACAGATAA 57.378 30.769 11.15 0.00 45.10 1.75
2106 3677 8.506437 CAAATTCACAAAGCTGTCTAACAGATA 58.494 33.333 11.15 0.00 45.10 1.98
2110 3681 6.449635 ACAAATTCACAAAGCTGTCTAACA 57.550 33.333 0.00 0.00 31.64 2.41
2111 3682 7.702348 AGAAACAAATTCACAAAGCTGTCTAAC 59.298 33.333 0.00 0.00 40.72 2.34
2112 3683 7.701924 CAGAAACAAATTCACAAAGCTGTCTAA 59.298 33.333 0.00 0.00 40.72 2.10
2113 3684 7.148086 ACAGAAACAAATTCACAAAGCTGTCTA 60.148 33.333 0.00 0.00 40.72 2.59
2114 3685 6.038356 CAGAAACAAATTCACAAAGCTGTCT 58.962 36.000 0.00 0.00 40.72 3.41
2115 3686 5.807011 ACAGAAACAAATTCACAAAGCTGTC 59.193 36.000 0.00 0.00 40.72 3.51
2116 3687 5.723295 ACAGAAACAAATTCACAAAGCTGT 58.277 33.333 0.00 0.00 40.72 4.40
2117 3688 6.038356 AGACAGAAACAAATTCACAAAGCTG 58.962 36.000 0.00 0.00 40.72 4.24
2118 3689 6.096001 AGAGACAGAAACAAATTCACAAAGCT 59.904 34.615 0.00 0.00 40.72 3.74
2119 3690 6.268566 AGAGACAGAAACAAATTCACAAAGC 58.731 36.000 0.00 0.00 40.72 3.51
2120 3691 8.616076 ACTAGAGACAGAAACAAATTCACAAAG 58.384 33.333 0.00 0.00 40.72 2.77
2121 3692 8.506168 ACTAGAGACAGAAACAAATTCACAAA 57.494 30.769 0.00 0.00 40.72 2.83
2122 3693 9.778741 ATACTAGAGACAGAAACAAATTCACAA 57.221 29.630 0.00 0.00 40.72 3.33
2129 3700 9.534565 GCATCATATACTAGAGACAGAAACAAA 57.465 33.333 0.00 0.00 0.00 2.83
2130 3701 8.918116 AGCATCATATACTAGAGACAGAAACAA 58.082 33.333 0.00 0.00 0.00 2.83
2131 3702 8.470657 AGCATCATATACTAGAGACAGAAACA 57.529 34.615 0.00 0.00 0.00 2.83
2148 3719 7.730084 AAGCTGTCTAACAGATAAGCATCATA 58.270 34.615 11.15 0.00 45.10 2.15
2149 3720 6.590068 AAGCTGTCTAACAGATAAGCATCAT 58.410 36.000 11.15 0.00 45.10 2.45
2150 3721 5.982356 AAGCTGTCTAACAGATAAGCATCA 58.018 37.500 11.15 0.00 45.10 3.07
2151 3722 6.314896 ACAAAGCTGTCTAACAGATAAGCATC 59.685 38.462 11.15 0.00 45.10 3.91
2152 3723 6.093219 CACAAAGCTGTCTAACAGATAAGCAT 59.907 38.462 11.15 2.69 45.10 3.79
2154 3725 5.639506 TCACAAAGCTGTCTAACAGATAAGC 59.360 40.000 11.15 4.40 45.10 3.09
2155 3726 7.658179 TTCACAAAGCTGTCTAACAGATAAG 57.342 36.000 11.15 3.81 45.10 1.73
2156 3727 8.621532 AATTCACAAAGCTGTCTAACAGATAA 57.378 30.769 11.15 0.00 45.10 1.75
2161 3732 6.449635 ACAAATTCACAAAGCTGTCTAACA 57.550 33.333 0.00 0.00 31.64 2.41
2162 3733 7.702348 AGAAACAAATTCACAAAGCTGTCTAAC 59.298 33.333 0.00 0.00 40.72 2.34
2163 3734 7.701924 CAGAAACAAATTCACAAAGCTGTCTAA 59.298 33.333 0.00 0.00 40.72 2.10
2164 3735 7.148086 ACAGAAACAAATTCACAAAGCTGTCTA 60.148 33.333 0.00 0.00 40.72 2.59
2165 3736 6.038356 CAGAAACAAATTCACAAAGCTGTCT 58.962 36.000 0.00 0.00 40.72 3.41
2166 3737 5.807011 ACAGAAACAAATTCACAAAGCTGTC 59.193 36.000 0.00 0.00 40.72 3.51
2167 3738 5.723295 ACAGAAACAAATTCACAAAGCTGT 58.277 33.333 0.00 0.00 40.72 4.40
2168 3739 6.038356 AGACAGAAACAAATTCACAAAGCTG 58.962 36.000 0.00 0.00 40.72 4.24
2169 3740 6.096001 AGAGACAGAAACAAATTCACAAAGCT 59.904 34.615 0.00 0.00 40.72 3.74
2171 3742 6.694411 CCAGAGACAGAAACAAATTCACAAAG 59.306 38.462 0.00 0.00 40.72 2.77
2172 3743 6.152661 ACCAGAGACAGAAACAAATTCACAAA 59.847 34.615 0.00 0.00 40.72 2.83
2173 3744 5.652014 ACCAGAGACAGAAACAAATTCACAA 59.348 36.000 0.00 0.00 40.72 3.33
2174 3745 5.192927 ACCAGAGACAGAAACAAATTCACA 58.807 37.500 0.00 0.00 40.72 3.58
2175 3746 5.757850 ACCAGAGACAGAAACAAATTCAC 57.242 39.130 0.00 0.00 40.72 3.18
2176 3747 9.166173 CATATACCAGAGACAGAAACAAATTCA 57.834 33.333 0.00 0.00 40.72 2.57
2181 3752 6.763135 GCATCATATACCAGAGACAGAAACAA 59.237 38.462 0.00 0.00 0.00 2.83
2182 3753 6.098838 AGCATCATATACCAGAGACAGAAACA 59.901 38.462 0.00 0.00 0.00 2.83
2183 3754 6.520272 AGCATCATATACCAGAGACAGAAAC 58.480 40.000 0.00 0.00 0.00 2.78
2185 3756 6.737720 AAGCATCATATACCAGAGACAGAA 57.262 37.500 0.00 0.00 0.00 3.02
2187 3758 7.975058 CAGATAAGCATCATATACCAGAGACAG 59.025 40.741 0.00 0.00 33.21 3.51
2189 3760 7.835822 ACAGATAAGCATCATATACCAGAGAC 58.164 38.462 0.00 0.00 33.21 3.36
2192 3763 9.533831 TCTAACAGATAAGCATCATATACCAGA 57.466 33.333 0.00 0.00 33.21 3.86
2193 3764 9.579768 GTCTAACAGATAAGCATCATATACCAG 57.420 37.037 0.00 0.00 33.21 4.00
2194 3765 9.088987 TGTCTAACAGATAAGCATCATATACCA 57.911 33.333 0.00 0.00 33.21 3.25
2198 3769 8.373981 AAGCTGTCTAACAGATAAGCATCATAT 58.626 33.333 11.15 0.00 45.10 1.78
2200 3771 6.590068 AAGCTGTCTAACAGATAAGCATCAT 58.410 36.000 11.15 0.00 45.10 2.45
2202 3773 6.314896 ACAAAGCTGTCTAACAGATAAGCATC 59.685 38.462 11.15 0.00 45.10 3.91
2203 3774 6.093219 CACAAAGCTGTCTAACAGATAAGCAT 59.907 38.462 11.15 2.69 45.10 3.79
2204 3775 5.409520 CACAAAGCTGTCTAACAGATAAGCA 59.590 40.000 11.15 0.00 45.10 3.91
2205 3776 5.639506 TCACAAAGCTGTCTAACAGATAAGC 59.360 40.000 11.15 4.40 45.10 3.09
2208 3779 8.506437 CAAATTCACAAAGCTGTCTAACAGATA 58.494 33.333 11.15 0.00 45.10 1.98
2213 3784 7.702348 AGAAACAAATTCACAAAGCTGTCTAAC 59.298 33.333 0.00 0.00 40.72 2.34
2214 3785 7.771183 AGAAACAAATTCACAAAGCTGTCTAA 58.229 30.769 0.00 0.00 40.72 2.10
2215 3786 7.333528 AGAAACAAATTCACAAAGCTGTCTA 57.666 32.000 0.00 0.00 40.72 2.59
2216 3787 6.212888 AGAAACAAATTCACAAAGCTGTCT 57.787 33.333 0.00 0.00 40.72 3.41
2217 3788 8.078596 AGATAGAAACAAATTCACAAAGCTGTC 58.921 33.333 0.00 0.00 40.72 3.51
2218 3789 7.945134 AGATAGAAACAAATTCACAAAGCTGT 58.055 30.769 0.00 0.00 40.72 4.40
2219 3790 8.295288 AGAGATAGAAACAAATTCACAAAGCTG 58.705 33.333 0.00 0.00 40.72 4.24
2220 3791 8.401490 AGAGATAGAAACAAATTCACAAAGCT 57.599 30.769 0.00 0.00 40.72 3.74
2221 3792 9.766277 CTAGAGATAGAAACAAATTCACAAAGC 57.234 33.333 0.00 0.00 40.72 3.51
2237 3808 9.612066 CAGTCAGCATCATATACTAGAGATAGA 57.388 37.037 0.00 0.00 0.00 1.98
2238 3809 9.394767 ACAGTCAGCATCATATACTAGAGATAG 57.605 37.037 0.00 0.00 0.00 2.08
2241 3812 9.389755 GATACAGTCAGCATCATATACTAGAGA 57.610 37.037 0.00 0.00 0.00 3.10
2242 3813 9.171877 TGATACAGTCAGCATCATATACTAGAG 57.828 37.037 0.00 0.00 31.80 2.43
2267 3852 2.632512 ACAGGGTAAAACAAATGGGCTG 59.367 45.455 0.00 0.00 0.00 4.85
2352 3940 7.772757 TGTCTGTGCAAACATTACATATGGATA 59.227 33.333 7.80 0.00 0.00 2.59
2368 3956 5.392767 TTTAAAAGGTTGTGTCTGTGCAA 57.607 34.783 0.00 0.00 0.00 4.08
2373 3961 9.097257 ACAATTGAATTTAAAAGGTTGTGTCTG 57.903 29.630 13.59 0.00 0.00 3.51
2486 4214 2.622470 TCACATCACCACAACAACCATG 59.378 45.455 0.00 0.00 0.00 3.66
2646 4386 7.996385 ACAACAAGTGCTAAAAACTAGATTGT 58.004 30.769 0.00 0.00 0.00 2.71
2794 4663 8.028354 CACACAAGCAAAGAATAATAATCCACA 58.972 33.333 0.00 0.00 0.00 4.17
2826 4695 4.134563 GCTTGAGTTCCTCCTTAACAACA 58.865 43.478 0.00 0.00 0.00 3.33
2851 4720 4.776322 CACGAGGGGCATCGGCAA 62.776 66.667 14.58 0.00 46.91 4.52
2944 4813 9.719355 TTCATCGTGGCAAACTATATATATGTT 57.281 29.630 5.44 5.36 0.00 2.71
2954 4823 2.472695 AGCTTCATCGTGGCAAACTA 57.527 45.000 0.00 0.00 0.00 2.24
2955 4824 2.076863 GTAGCTTCATCGTGGCAAACT 58.923 47.619 0.00 0.00 0.00 2.66
3013 4882 9.503399 CCTAACCAAATTTACTTTAGTCTCAGT 57.497 33.333 0.00 0.00 0.00 3.41
3034 4903 7.800300 AATCCAGAATAGGTCTATCCCTAAC 57.200 40.000 0.00 0.00 40.42 2.34
3139 5008 6.344936 CGAATGGATTTTTGTTTTCACAGACG 60.345 38.462 0.00 0.00 33.22 4.18
3170 5039 4.887071 TGTGTGAATCAAACTGCCTTTACT 59.113 37.500 5.05 0.00 0.00 2.24
3173 5042 3.446873 TGTGTGTGAATCAAACTGCCTTT 59.553 39.130 5.05 0.00 35.43 3.11
3231 5100 9.626045 ATGACAAAAGTAGCTAAATTAAGTTGC 57.374 29.630 0.00 0.64 0.00 4.17
3270 5145 6.086871 GGCAGAAAATAAGTACACTTTGCTC 58.913 40.000 11.76 2.56 37.40 4.26
3331 5206 8.518430 AGAGCATATAGAGATATACAGTGTGG 57.482 38.462 5.88 0.00 0.00 4.17
3361 5236 4.202070 ACAAATCAACAACTTGGGGTTACG 60.202 41.667 0.00 0.00 36.23 3.18
3407 5282 2.805099 GGAGGAGATAATTTCTGCAGCG 59.195 50.000 9.47 0.00 44.79 5.18
3456 5331 1.520342 GTTGCAGCTAGCTCCCTCG 60.520 63.158 16.15 4.23 45.94 4.63
3565 5440 9.352784 GTGATTATTAGAGAGAGATATGCACAC 57.647 37.037 0.00 0.00 0.00 3.82
3566 5441 9.082313 TGTGATTATTAGAGAGAGATATGCACA 57.918 33.333 0.00 0.00 0.00 4.57
3604 5479 1.186200 ATAGCAGGACGAGAAGCACA 58.814 50.000 0.00 0.00 0.00 4.57
3687 5562 0.034476 TCCTGCTCAGAACAGCACTG 59.966 55.000 0.00 0.00 44.73 3.66
3688 5563 0.321021 CTCCTGCTCAGAACAGCACT 59.679 55.000 0.00 0.00 44.73 4.40
3771 5646 4.418190 AGGGAAATATCTGGCTGAGGAATT 59.582 41.667 0.00 0.00 0.00 2.17
3772 5647 3.986134 AGGGAAATATCTGGCTGAGGAAT 59.014 43.478 0.00 0.00 0.00 3.01
3773 5648 3.397527 AGGGAAATATCTGGCTGAGGAA 58.602 45.455 0.00 0.00 0.00 3.36
3774 5649 3.066208 AGGGAAATATCTGGCTGAGGA 57.934 47.619 0.00 0.00 0.00 3.71
3775 5650 3.484407 CAAGGGAAATATCTGGCTGAGG 58.516 50.000 0.00 0.00 0.00 3.86
3776 5651 2.883386 GCAAGGGAAATATCTGGCTGAG 59.117 50.000 0.00 0.00 0.00 3.35
3777 5652 2.423373 GGCAAGGGAAATATCTGGCTGA 60.423 50.000 0.00 0.00 0.00 4.26
3778 5653 1.959282 GGCAAGGGAAATATCTGGCTG 59.041 52.381 0.00 0.00 0.00 4.85
3779 5654 1.570501 TGGCAAGGGAAATATCTGGCT 59.429 47.619 0.00 0.00 0.00 4.75
3780 5655 1.959282 CTGGCAAGGGAAATATCTGGC 59.041 52.381 0.00 0.00 0.00 4.85
3781 5656 3.117738 AGTCTGGCAAGGGAAATATCTGG 60.118 47.826 0.00 0.00 0.00 3.86
3782 5657 4.162040 AGTCTGGCAAGGGAAATATCTG 57.838 45.455 0.00 0.00 0.00 2.90
3783 5658 4.870021 AAGTCTGGCAAGGGAAATATCT 57.130 40.909 0.00 0.00 0.00 1.98
3784 5659 4.339530 GGAAAGTCTGGCAAGGGAAATATC 59.660 45.833 0.00 0.00 0.00 1.63
3785 5660 4.281657 GGAAAGTCTGGCAAGGGAAATAT 58.718 43.478 0.00 0.00 0.00 1.28
3786 5661 3.563479 GGGAAAGTCTGGCAAGGGAAATA 60.563 47.826 0.00 0.00 0.00 1.40
3787 5662 2.529632 GGAAAGTCTGGCAAGGGAAAT 58.470 47.619 0.00 0.00 0.00 2.17
3788 5663 1.480498 GGGAAAGTCTGGCAAGGGAAA 60.480 52.381 0.00 0.00 0.00 3.13
3789 5664 0.112412 GGGAAAGTCTGGCAAGGGAA 59.888 55.000 0.00 0.00 0.00 3.97
3790 5665 1.767692 GGGAAAGTCTGGCAAGGGA 59.232 57.895 0.00 0.00 0.00 4.20
3791 5666 1.675641 CGGGAAAGTCTGGCAAGGG 60.676 63.158 0.00 0.00 0.00 3.95
3792 5667 0.035056 ATCGGGAAAGTCTGGCAAGG 60.035 55.000 0.00 0.00 0.00 3.61
3793 5668 2.555199 CTATCGGGAAAGTCTGGCAAG 58.445 52.381 0.00 0.00 0.00 4.01
3794 5669 1.406887 GCTATCGGGAAAGTCTGGCAA 60.407 52.381 0.00 0.00 0.00 4.52
3795 5670 0.178068 GCTATCGGGAAAGTCTGGCA 59.822 55.000 0.00 0.00 0.00 4.92
3796 5671 0.876342 CGCTATCGGGAAAGTCTGGC 60.876 60.000 0.00 0.00 0.00 4.85
3797 5672 3.274393 CGCTATCGGGAAAGTCTGG 57.726 57.895 0.00 0.00 0.00 3.86
3808 5683 4.280101 ACATCTATCGATTCCGCTATCG 57.720 45.455 1.71 10.12 46.63 2.92
3809 5684 5.972382 GGTAACATCTATCGATTCCGCTATC 59.028 44.000 1.71 0.00 35.37 2.08
3810 5685 5.417894 TGGTAACATCTATCGATTCCGCTAT 59.582 40.000 1.71 0.00 46.17 2.97
3811 5686 4.763279 TGGTAACATCTATCGATTCCGCTA 59.237 41.667 1.71 0.00 46.17 4.26
3812 5687 3.572682 TGGTAACATCTATCGATTCCGCT 59.427 43.478 1.71 0.00 46.17 5.52
3813 5688 3.909430 TGGTAACATCTATCGATTCCGC 58.091 45.455 1.71 0.00 46.17 5.54
3827 5702 4.093966 TACCGCTCCGTGGTAACA 57.906 55.556 3.96 0.00 45.32 2.41
3830 5705 0.464373 CTAGGTACCGCTCCGTGGTA 60.464 60.000 6.18 2.36 45.32 3.25
3832 5707 3.117372 CTAGGTACCGCTCCGTGG 58.883 66.667 6.18 0.00 39.41 4.94
3833 5708 1.940883 TTGCTAGGTACCGCTCCGTG 61.941 60.000 6.18 0.00 0.00 4.94
3834 5709 1.679977 TTGCTAGGTACCGCTCCGT 60.680 57.895 6.18 0.00 0.00 4.69
3835 5710 1.226888 GTTGCTAGGTACCGCTCCG 60.227 63.158 6.18 0.00 0.00 4.63
3836 5711 1.143401 GGTTGCTAGGTACCGCTCC 59.857 63.158 6.18 8.26 0.00 4.70
3837 5712 0.535797 AAGGTTGCTAGGTACCGCTC 59.464 55.000 6.18 0.00 39.46 5.03
3838 5713 0.535797 GAAGGTTGCTAGGTACCGCT 59.464 55.000 6.18 0.00 39.46 5.52
3839 5714 0.248289 TGAAGGTTGCTAGGTACCGC 59.752 55.000 6.18 5.47 39.46 5.68
3840 5715 2.981859 ATGAAGGTTGCTAGGTACCG 57.018 50.000 6.18 0.00 39.46 4.02
3841 5716 3.200165 AGGAATGAAGGTTGCTAGGTACC 59.800 47.826 2.73 2.73 34.54 3.34
3842 5717 4.192317 CAGGAATGAAGGTTGCTAGGTAC 58.808 47.826 0.00 0.00 0.00 3.34
3843 5718 3.370527 GCAGGAATGAAGGTTGCTAGGTA 60.371 47.826 0.00 0.00 0.00 3.08
3844 5719 2.619074 GCAGGAATGAAGGTTGCTAGGT 60.619 50.000 0.00 0.00 0.00 3.08
3845 5720 2.019984 GCAGGAATGAAGGTTGCTAGG 58.980 52.381 0.00 0.00 0.00 3.02
3846 5721 2.996631 AGCAGGAATGAAGGTTGCTAG 58.003 47.619 0.00 0.00 42.81 3.42
3847 5722 3.439857 AAGCAGGAATGAAGGTTGCTA 57.560 42.857 0.00 0.00 43.74 3.49
3848 5723 2.299326 AAGCAGGAATGAAGGTTGCT 57.701 45.000 0.00 0.00 46.25 3.91
3849 5724 3.320626 GAAAAGCAGGAATGAAGGTTGC 58.679 45.455 0.00 0.00 35.09 4.17
3850 5725 3.612479 CGGAAAAGCAGGAATGAAGGTTG 60.612 47.826 0.00 0.00 0.00 3.77
3851 5726 2.558359 CGGAAAAGCAGGAATGAAGGTT 59.442 45.455 0.00 0.00 0.00 3.50
3852 5727 2.162681 CGGAAAAGCAGGAATGAAGGT 58.837 47.619 0.00 0.00 0.00 3.50
3853 5728 2.162408 GACGGAAAAGCAGGAATGAAGG 59.838 50.000 0.00 0.00 0.00 3.46
3854 5729 3.477899 GACGGAAAAGCAGGAATGAAG 57.522 47.619 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.